Pyrococcus abyssi


Phylogenetic domain patterns
On this page : Pyrococcus only then Eucarya

P. abyssi complete orfs database Blasted vs. nr Databank (12/00) + S. solfataricus
Expect <= 1e-10

=: Pyrococcus
a: archae
b: Bacteria
e: Eucarya
v: Virus
o: Other
*: unknown


Get complete domain pattern for orf(s):



Click on ORF to access orf sequence
Click on DOMAIN_PATTERN to access Blast result file




          DOMAIN
ORF       PATTERN                                           MATCHED_ORGANISMS

PAB0482  =ebebebebebabeba                                                                             paby  phor  pfur  atha  atha  bvul  lesc  atha  cace  atha  bsub  lesc   atha  atha  atha   bhal    atha  saur  stub  saur   tmar  valg  pmul    kpne  eamy  vcho  ecol    eo15  styp  bhal  xfas  cace  mlot  cbei  bhal  bsub  smel  ssol  syne  atha  llac  rleg  ccre  atum  ecol  tmar  atum  paer  paer  bsub   pflu  smel  atum  smel  scoe  sa32  bste  paer  vcho  cace  aper                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
PAB0593  =ebebababeabab                                                                               paby  phor  pfur  tvag  pseu  hexa  cper  eo15  ecol  saur  aave  aper   eo15  ecol  taci   spyo    gint  hsal  llac  efaec  llac  syne  llacti  lsak  paer  llac  llacti  tvol  saur  llac  spne  blic  hinf  retl  smel  mpne  ecol  eo15  saur  saur  saur  saur  saur  saur  saur  saur                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
PAB0966  =ea                                                                                          paby  phor  dmel  hsap  hsap  hsap  hsap  rnor  cfam  mmus  mmus  cele   rnor  mthe                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
PAB1060  =e=                                                                                          paby  phor  atha  paby  phor                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
PAB1287  =eaeae                                                                                       paby  phor  hsap  mmus  atha  atha  spom  ssol  scer  dmel  scer  halo   cele  lmaj                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
PAB1349  =eabebebebebe                                                                                paby  phor  fcat  fcat  mmus  mmus  cfam  hsap  hsap  gb|   spne  spne   mfas  mfas  hsap   hsap    bcir  atha  atha  sa32   dmel  arth  xfas    cace  xpv.  mmus  dmel    cele  atha  atha  osat  ntab  sa32  cann  fx    atha  atha  mmus  atha  atha  lesc  vvin  atha  atha  vrad  lesc  lang  lesc  vrad  boler  atha  atha  atha  atha  lesc  cari  atha  aoff  fx    lesc  atha  cari  mx    atha  ppyr  fx    lesc  atha  atha  atha  atha  atha  atha  atha  cpap  mind  cari  atha  atha  atha  atha  atha   atha  cele  cele  lesc  dcary  lesc  cfam  cpap  atha  atha  mmus  anig                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
PAB1789  =eaeaeaeaea=eaea=e=eae=aeaeaeae=e=eaeaeaeaeaeaeaeaeaebeaebeb*ebeae*ebebebebevebebebebebebebe paby  phor  hsap  crei  xlae  dmel  mmus  hsap  dmel  hsap  aful  spur   atha  dmel  dmel   dmel    mcry  scer  scer  saci   hsap  spom  osat    atha  dmel  ssol  atha    atha  ssol  atha  scer  atha  scer  aper  paby  hsap  hsap  hsap  aper  hsap  mmus  atha  mmus  tkod  paby  hsap  hsap  dmel  lmaj  spom   cele  phor  atha  mmus  hsap  mmus  hsap  ssol  atha  phor  aper  mjan  aful  hsap  hsap  atha  spom  ssol  atha  scer  atha  atha  hsal  halo  mmus  mjan  spom  atha  cele  hsap  mmus  sdome  rnor  mmus  mmus  hsap  hsap   hsap  cele  mmus  phor  scer  sscr  hsap  paby  ddis  atha  cele  xlae  ssol  atha  spom  taci  osat  atha  tvol  gthe  osat  atha  atha  tvol  tbru  mthe  atha  aper  scer  cele  gmax  dmel  cann  atha  atha  dmel  mthe  dmel  aful  cele  taci  halo  cele  osat  ehis  spom  atha  lmaj  scer  hpylo  mmus  halo  dmel  dmel  hpyl  dmel  tbru  lmaj  hpylor  cele  cele  cele  hfel  osat  ssol  ptae  mpar  atha  atha  hsap  pfal  hsap  hsap  hsap  spom  hsap  mmus  spom  rpro  scer  atha  dmel  atha  rnor  atha  brap  rnor  brap  mmus  aaeo  mmus  mmus  osat  scer  atha  atha  ncra  lmaj  lesc  dmel  dmel  dglo  pchry  cmer  spom  hsap  hsap  tbru  mgen  tbru  msex  spom  gthe  rnor  ncra  fsyl  xlae  hsap  mpne  xlae  hsap  scer  scer  hsap  gthe  calb  sscr  mmus  gthe  rnor  hsap  4aa  ppas  hann  ccre  scer  scer  mmus  cele  scer  cele  ddis  nfow  lmaj  xlae  tthe  uure  ccal  hinf  dmel  smel  atha  sa32  atha  syne  drad  bjap  mpul  pang  syne  atha  atha
PAB2213  =ebeb*bebebe                                                                                 paby  phor  paby  phor  scer  spom  3aa   scer  spom  cele  atum  pcari  pf.   tmar  lstra  llacti  atha  atha  cjej  bsub   slav  bsub  ntab    smel  sole