LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search

Pyrococcus abyssi >PAB0212 soxA sarcosine oxidase, subunit alpha MDIVRIKEHPILNFESKRGRKVTIYYKGKPIEAYEGETIAAALHAAGIKVLNYSRIKKRPRGLFCAIGKCSSCLMTVNGI PNVRTCITLVEDGMRIEENAPRLPKELKELKKRNVRRVKSDIIVIGGGPAGMMAAISAHDAGAKVVLIDENPMLGGQLVK QTHKFFGKRSQFAGVRGVKIAEILENEVKKRNIEVFLQTSAVGIFQDGNEKIVVGIRKESELIELHGRAIIVATGAMEKS VPFENNDLPGIYGAGAIQTLMNTYGVKPGEKALIVGAGNVGLILAYQLIQAGVKVEAIVEAMPKIGGYFVHAAKVRRLGV PILTRHTILRAEGKEKVERAIVAQIDENWRPIPGTEKIFDVDLIAIAVGLRPSIELLQQAGCQIRYVRELGGHVAVRDEW LETTVRGIFVAGDTAGIEEATTAMLEGKIAGIAAALRLGIASESLVKEIEKTERELEEFRSGPFGKHIVEGIRKLLSEVS K

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14520528 Gene name: soxA COG: R COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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