Pyrococcus abyssi
>PAB0423 rpoB DNA-directed RNA polymerase, subunit B (EC 2.7.7.6)
MRGPTVVEVTPDDLWIVMESYWQEKGLVRQHLDSYNAFIDRGLQEVVDEFGGIKPDIPDFEVKFGKIRVGEPEFQEPHGQ
RKPLYPMDARIRNLTYSAPLYLEMIPVIRGIEQEPVEVRIGELPIMLKSKVCRLYGLSDDELRQLGEDPKDPGGYFIING
SERVIVSIEDIAPNRTLVEKDERQEKYIAKVFSYRHGYRALVTVERKKDGILYVGIPNVPKPVKFVYVMRALGLERDKDI
VDAVGNDPEVQQILFDNLEDASDITTQQEALEYIGKLVAPGQAREYRLKRAEYVIDNNLLPHIGVSPEDRIRKAYYLGMM
ALKVIELSLGKRDEDDKDHYANKRLRLAGDLLKDLFRVAFSQLVKDIQYQMTKTYQRRGEKYVFGNIHRFIRNSIRPDVL
TERIEHALATGAWPGGRTGVSQLLDRTNYVSTLSHLRRVTSPLDREQPHFEARDLHGTHWGRICPTETPEGPNCGLVKNL
ALMAQITTAVPEEEVKEYLMSLGIVPIEVRRPSPELWRVYLNGVIIGTIEDGKALVERIKKDRRSGKISDIINVAYYEDV
REVYVNSDDGRVRRPLIIVENGKPKLTKEHVQAIKEGRLKWSDLVRMGVIEYLDAEEEENAYVAMWPWEVTEEHTHLELM
PAAILGLPASLIPYPEHNAAPRNTYGAGMAKQSLGLGWANFRIRVDTRGHLLHYPQIPLVNSRIMKAVGYEDRPAGQNFV
VAVLAYHGYNMEDAIIINKASIERGLARSTFFRTYEAEEKKYLGGQTDKFEIPSPTVRGYRGEKYYRHLDEDGLIFPESK
VEGKDVLIGRTSPPRFLEERGLGAVSLQERRETSVAVRPSERGVVDKVIITETGDGTKLVKVTVRDLRIPEIGDKFASRH
GQKGVIGLIVPQEDMPWTESGIVPDLIVNPHGIPSRMTVGQLLEAIGGKVAALKGRRVDGTAFIGEPEEKLRKELEELGF
KHTGREIMYDGITGKRFEADIFVGVIYYQRLHHMVADKIHARSRGPVQVLTKQPTEGRAREGGLRFGEMERDVLVGHGAA
MLLIERLLEESDKTEVWVCENCGHIALEDKRRHKVYCPVCGEEERISKVEMSYAFKLLLDELKAMVIRPKLNLTERV



Supplementary options

Additional orf sequence data

See Genomic Environment

Search GenBank with PSI-Blast at NCBI

Search Complete Genomes DataBase with Blast at LBMGE

Search InterPro Database at LBMGE

Search CDD Database at LBMGE

Determine COG functional Category (microbial)

Determine COG functional Category (eukarial)

See this orf in P. abyssi Data Base

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GenBank id: 14520830                   
Gene name:  rpoB                                                                                            
COG:        K COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit                              
Taxon:      272844 
Lineage:    Archaea:                                                                                        
            Euryarchaeota:                                                                                  
            Thermococci:                                                                                    
            Thermococcales:                                                                                 
            Thermococcaceae:                                                                                
            Pyrococcus:                                                                                     
            Pyrococcus abyssi:                                                                              
            Pyrococcus abyssi GE5                                                                           

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