LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Pyrococcus abyssi >PAB0740 Queuine-archaeosine tRNA ribosyltransferase MSRGDKMLKFEVKARDGAGRIGKLEVNGKKIETPAIMPVVNPKQLIVEPKELEKMGFDIIITNSYIIYKDRELREKALEV GIHKLLGYDGIIEVDSGSFQLMRYGNVDVSNREIVEFQHRIGVDIGTFLDIPTPPDAPKEKAMEDLKITLERAREAEEIK EIAMNAAIQGSTYTDLRRYAARRLSSMNFEIHPIGGVVPLLEAYRFREVVDIVISSKMALRPDRPVHLFGAGHPMVFALA VAMGVDLFDSASYALYAKDDRYLTPEGTKRLDELEYFPCSCPVCSRYTPQELREMPKEERARLLAIHNLWVIKEEIERIK QAIREGELWRLVDERARSHPKLYSAYKRLLDHYTFLEEFEPVTKKSAVFKISHESLRWPLVRRARERAERVNSKFGDLVE HPIFGKVTKYLTLTYPFAQSEAEDEFSIEKPTRENAIRYVMAIAEYQFGENASKAFEGAEVELARTGMPRQVKLNGKRLA TVRAEDGFLTLGIEGAKRLHKVLEYPRMRVVVSEEAEPFARKGKDVFAKFVLFADPGIRPYDEVLVVNEKDELLATGQAL MSGREMIVFQYGRAVKVRRGISGG

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521321 Gene name: tgtA COG: J COG0343 Queuine/archaeosine tRNA-ribosyltransferase O COG1370 Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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