LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Pyrococcus abyssi >PAB0855 iorA indolepyruvate ferredoxin oxidoreductase, subunit alpha MVKVTDIVLWDKPGERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFETALSAS WAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSMWSSQNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYA FEISEKYGQMVILRTTTRSSHMRGDVVLGELPQEIKEGKRKFGDFKKNPERYVDIPAFQRPKHKWLLETIEKFREEFNNS PFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGLERVLIVEELEPVVEEQVKVW AFDKGINVEIHGKDLVPRVYEMTTRRAVEAIAKFLGLETPINFEEIDEKYKKVQEIVPPRPPSLCPACPHRNTFFALRKA ATPRAIYPSDIGCYTLGVLPPLKTVDTTIAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPAL ANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTGETPHGPGKRILIEEVAKAMGADFVAVVDPYDIKETYETFKKALEVEGV SVVVARRACALYRIGQLRRAGKQWPIYQVNEDKCTGCKICINAYGCPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDAF EKVREGEL

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521496 Gene name: iorA-1 COG: C COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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