LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Pyrococcus abyssi >PAB1312 ERCC3/XPB TFIIH basal transcription factor complex helicase, XPB subunit homolog MKLYYDRGTIKVIGNSYVPYARWDERCRCYRALAYKYRDIVEFLESEGIEFEDYVLENALPSRVYDDVEFELRDYQEEAV ERWMREKRGVIVLPTGAGKTIVAMEIIKRLSLSTLVIVPTLALLEQWKERLEIFGDVGEFSGRKKELKPITVTTYDSAYI NAEFLGDKFFLLIFDECHHLPSEAYRNIAQMSAAPYRLGLTAFPERADNLHDLLPDLIGPIVYKKAPRELMGTYLAPYEL VRVKVPLSREERAEYLKHYKVFKRYLSESGLRIKSLEDFQKIVMRTGVDNKAFKALRALEEARKIALGSKAKIEELRKIL ERHRGEKIIISTRYNELVYEISRKFLIPAITHKTSKEERVEILRKFREGKYMAVVSSQVLDEGIDVPDASVGIIISGTGS PRELVQRLGRILRPAPGKERAILYELITPGTTEVRISSRRLSGIKKLESLDDL

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521782 Gene name: - COG: KL COG1061 DNA or RNA helicases of superfamily II Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
^__________