LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Pyrococcus abyssi >PAB1332 cheA chemotaxis histidine kinase MVTLEDMSQYLDEFLADARDRIDSLSNAILTLEKIVKEGGSEEEKAELINQIFRDAHTLKGTAATMGFMKLSETAHKMEN LFDAIRNSQIELTPEVVDLVLDFLDAIEAMVNNIEESGSEGDIDVSDLFRRADEFLQGGKGAEKKPEEEKPKEEVEAKEE EKPEKVEEGVEGKVYHIKVYFQKDAPLKGVRAFLILSDLEERGEVIWTNPGRDVIESGNLDKDVIEFKVSSDLPKEELEK VITRHPEVEKVEIIEEGEEEKGPEGEEKEYLIRVYFSPDAPLKGPRSYLILQDLESIGDIVQTNPNRGDIENGNLLEGKF FEVVLRTKEDKSKIVQLIKKHPDVENFVVTEAEAEEKQEKKEEKAEEKKPQPPKQPKKPVIETPRVKISRIIKIDVGHLD KLMNLVGELVITKGRLEQIGERLGDRELFEALSTLSRLLTELQDEIMEMRLTPIAEVFNKFPRMVRDLARKMGKEVEFVM EGADIEVDRTILEKLGDALVHLLRNAVDHGIEPPEERVKLGKPRVGRVELIAKREKNHVVIIVRDDGRGIDPEKVKKKAI ERGLITPEEAASLSDEEAINLIFLPGFSTAEKVTDVSGRGVGMDVVKEVVKSMNGSISVQTEVGKGTTFILKLPISMAII QALLIRVMDETYAIPINNILETIEVDPSILKTIGGKPVIVLRGEIIPVVMLHELFGLPTPQVERFPAIIVDHGAQKVAIG VDELLHKRDIVIKSLGKFLSNVRGFAGATILGDGSVVLIIDIGGLLGGGYSG

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521752 Gene name: cheA COG: NT COG0643 Chemotaxis protein histidine kinase and related kinases Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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