LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Pyrococcus abyssi >PAB1387 flaJ flagella-related protein J MIKVPQEKISIFVKADLDPRTYLRRILLPGLLGSFVLFIVVSVFTRMIPLPRGLVFFMYLIPIIIAIYVAAYPYLAADSK RISINSKLPYFITYFAVLSTSEIGRTDILKVLASDPKLGAIAGEMKKVYMIVDKLHRSLPEAFRFLAKRTPSRVFADFLD RLAYSLDSGVELKDYLFQEQQTVMDDYQTFYEGALYDLDIFKEIYESIIISIVFAGAFMIIGPIITGQNIGRLALYLAFL ILVAEIGSLMVIKYRMPEDPIWAEKRVETPRHRKIKRALIISSMLVPIVFLLYFILIRPRFKLPTPFVIALSLTPLAYAG NVVRKEEAMIFRKDENFPAFIRSLASSLASSGASLLLVLKYLSAHDFGTLTEDIRSLYRRLAVRVDTVRAWDFFIAETGS WLIGIFSEIFRESLRLGAEPDYVGKVISRNFERLVRLRRKRVQSVSNFIGIILGLTGAFAFSLAASFQVAVAINDIFSKF QVPTEYIGEIIHIIPPSGMKLLDLSLLLIMIVHSLLSALAIKVADGGNLLGSLYYFVILLWVFAFGMYIGQTLMARFMSV GEGGMILHLLGV

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521685 Gene name: - COG: NU COG1955 Archaeal flagella assembly protein J Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
^__________