Genomapper BLAST  psiBLAST  Mulalbla  Multalin  Genes & Genomes  BLAST (restricted)  Genome Guts  COG Guess  INTERPROScan  CDD search  Pattern search  Sequence Patterns  COG Trees  Genome Syntenizer
Pyrococcus abyssi
>PAB1722 DEAD/DEAH box RNA helicase
MIDVFKGLESEIVNLHEIPPRKGSYGSFKFRHEEVNKLVEELGFKLYSHQVEALKLLYSGKNVVVSTPTASGKSEIFRLF
IFDEFLEDSSSTFLLIYPTRALINNQLEKFERENEIFSKITGRKVGNSILTGDVELSERRRIRREKPNVIFTTPDMLHYN
LLPRWLDYKWLFKNLKLLVVDELHIYRGVFGSNVAYVFRRLFLRLRRLKVNPRILALSATLKNPKDFAEKFFGFEFEEVT
EAGNPSPKRYIIMFEPTRFSGEQLIRQIVERLVENDVKTLVFFDSRKGTERIMRMFLGSKVFNLITTYKGTLTKLERWRI
ESDFREGKLKALLTTNALELGIDVGDLDAVINYGIPSDGLFSLIQRFGRAGRDPNRVAINGIVLRRNGLDYYYKEHFEEL
VEGIEKGLVEGIPVNLDNERIAKKHLHYLLSELGVVDVNEIPEHWRIALRPLKEEGIVEEYLNPLTNKVEIRIKKPAIYS
SIRSTSDESFFLVKDEGWIRSSLVRKSGGELLRFVNYLKARGFIIEEVDEVEFYRSLLPGMVYPSRGRLFMVIDKINVDK
FHFVFAQEIPMNEDVETNVHKSENVEVLKVQDEKSFGPIKVYFGRLKVTHEYLGYAVKGKDVERHVERLERLRDAGILRG
EIEFNVTMFEEWWKFARVSFYSPYKREFETEGVWLVFPRSIDEVPAEEFRHFFSIASEYNYELAMFLFNKLSRGVLFPSL
LGATTHYIRAVIRKVAKEEGLDENFVFAVKKMVDSKDGVKSGLHAIEHNLIKIAPVVTHVDSRELGGYSYDDFNGLPTIF
IYDGNEGGSGIARLIYENIEKLIVRSREHIAKCPCKDGCPACVYSPKCGTFNEFLDKWMAIKIWDKVLNQKV

Supplementary options
Additional orf sequence data See Genomic Environment
Search GenBank with PSI-Blast at NCBI Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE Search CDD Database at LBMGE
Determine COG functional Category (microbial) Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base
__________ GenBank id: 14521181 Gene name: - COG: R COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
__________