| | | | | | | | | | | | | | | | | | | | | 10/10/03 00:00:00 | | |
| AY214600_018 | 498 | 1715 | | | ribonuclease R (partial) | | 1 | D | ADDED | | | | N-terminal ribonuclease; frameshift with ORF3 | PROTEIN | COG0557 Exoribonuclease R | K Transcription | | | 82.227.62.180 | 25/10/07 19:16:10 | one match in each of acidobacterial genomes | |
| AY214600_024 | 1523 | 2356 | | | ribonuclease R (partial) | | 1 | D | ADDED | | | | C-terminal ribonuclease; frameshift with ORF2 of contig, overlap | PROTEIN | COG0557 Exoribonuclease R | K Transcription | | | 82.227.62.180 | 25/10/07 19:17:17 | one match in each of acidobacterial genomes | |
| AY214600_042 | 2728 | 4077 | | | tRNA(Ile)-lysidine synthetase | | 1 | D | ADDED | | | | | PROTEIN | COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control | D Cell cycle control, cell division, chromosome partitioning | | | 82.227.62.180 | 25/10/07 19:20:17 | one match in each of acidobacterial genomes | |
| AY214600_052 | 4135 | 5199 | | | ATP-dependent metalloprotease FtsH | | 1 | D | ADDED | | | | | PROTEIN | COG0465 ATP-dependent Zn proteases | O Posttranslational modification, protein turnover, chaperones | | | 82.227.62.180 | 25/10/07 19:22:07 | one match in each of acidobacterial genomes | |
| AY214600_059 | 5109 | 6059 | | | ATP dependent Metalloprotease (C-terminal) | | 1 | D | ADDED | | | | | PROTEIN | COG0465 ATP-dependent Zn proteases | O Posttranslational modification, protein turnover, chaperones | | | 129.175.112.83 | 26/10/07 05:55:49 | one match in each acidobacterial genime; no match in contigs | |
| AY214600_072 | 6094 | 6981 | | | Dihydropteroate synthase | | 1 | D | ADDED | | | | | PROTEIN | COG0294 Dihydropteroate synthase and related enzymes | H Coenzyme transport and metabolism | | | 129.175.112.83 | 26/10/07 05:58:26 | one match in each acidobacterial genime; no match in contigs; match to KM3_F8_02 (50%id) | |
| AY214600_081 | 7080 | 7787 | | | protein of unknown function DUF147 | | 1 | D | ADDED | | | | | PROTEIN | COG1624 Uncharacterized conserved protein | S Function unknown | | | 129.175.112.83 | 26/10/07 06:00:11 | one match in each acidobacterial genime; no match in contigs; | |
| AY214600_092 | 7808 | 8677 | | | beta-lactamase | | 1 | D | ADDED | | | | | PROTEIN | COG1680 Beta-lactamase class C and other penicillin binding proteins | V Defense mechanisms | | | 129.175.112.83 | 26/10/07 06:02:16 | several matches in Solibacter, one match in Acidobacterium | |
| AY214600_163 | 14607 | 16049 | | | hypothetical protein | | 1 | D | ADDED | | | | | PROTEIN | | | | | 129.175.112.83 | 26/10/07 06:08:17 | no matches to Acidobacteria; matches to bacterial proteins with different lengths; same lenth as eukaryal proteins | |
| AY214600_173 | 15868 | 16944 | | | hypothetical protein | | 1 | D | ADDED | | | | match to helicase, but with different length; frameshift possible | PROTEIN | COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member | L Replication, recombination and repair | | | 129.175.112.83 | 26/10/07 06:10:49 | no matches to Acidobacteria; matches to bacterial proteins with different lengths; same lenth as eukaryal proteins | |
| AY214600_183 | 16987 | 17493 | | | hypothetical protein | | 1 | D | ADDED | | | | match to helicase, but with different length; frameshift possible | PROTEIN | COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member | L Replication, recombination and repair | | | 129.175.112.83 | 26/10/07 06:12:45 | no matches to Acidobacteria; matches to bacterial proteins with different lengths | |
| AY214600_187 | 17493 | 17873 | | | helicase related protein | | 1 | D | ADDED | | | | match to helicase, probable frameshift with two adjacent ORFs | PROTEIN | COG0514 Superfamily II DNA helicase | L Replication, recombination and repair | | | 129.175.112.83 | 26/10/07 06:14:39 | no matches to Acidobacteria; matches to bacterial proteins with different lengths | |
| AY214600_200 | 18717 | 18349 | | | hypothetical protein | | 1 | R | ADDED | | | | frameshift | PROTEIN | | | | | 129.175.112.83 | 26/10/07 06:16:31 | no matches to Acidobacteria | |
| AY214600_205 | 19081 | 18698 | | | conserved hypothetical protein | | 1 | R | ADDED | | | | frameshift | PROTEIN | | | | | 129.175.112.83 | 26/10/07 06:18:35 | no matches to Acidobacterium; two matches to Solibacter | |
| AY214600_214 | 19680 | 19102 | | | protein of unknown function DUF820 | | 1 | R | ADDED | | | | protein conserved in cyanobacteria | PROTEIN | COG4636 Uncharacterized protein conserved in cyanobacteria | S Function unknown | | | 129.175.112.83 | 26/10/07 06:20:43 | no matches to Acidobacteria | |
| AY214600_221 | 20555 | 19845 | | | ABC transporter related | | 1 | R | ADDED | | | | | PROTEIN | COG0410 ABC-type branched-chain amino acid transport systems, ATPase component | E Amino acid transport and metabolism | | | 129.175.112.83 | 26/10/07 06:22:52 | several match in Acidobacteria; several in other acidobacterial contigs | |
| AY214600_225 | 21322 | 20753 | | | ABC transporter related | | 1 | R | ADDED | | | | same matches as contig before (frameshift) | PROTEIN | COG0410 ABC-type branched-chain amino acid transport systems, ATPase component | E Amino acid transport and metabolism | | | 129.175.112.83 | 26/10/07 06:23:53 | several match in Acidobacteria; several in other acidobacterial contigs | |
| AY214600_235 | 22102 | 21326 | | | branched-chain amino acid ABC transporter | | 1 | R | ADDED | | | | matches with different length | PROTEIN | COG4177 ABC-type branched-chain amino acid transport system, permease component | E Amino acid transport and metabolism | | | 129.175.112.83 | 26/10/07 06:27:41 | | |
| AY214600_246 | 23093 | 22305 | | | branched-chain amino acid ABC transporter | | 1 | R | ADDED | | | | length OK | PROTEIN | COG0559 Branched-chain amino acid ABC-type transport system, permease components | E Amino acid transport and metabolism | | | 129.175.112.83 | 26/10/07 06:30:19 | no match to Acidobacteria | |
| AY214600_262 | 23349 | 24398 | | | von Willebrand factor, type A | | 1 | D | ADDED | | | | length OK | PROTEIN | | | | | 129.175.112.83 | 26/10/07 06:32:11 | several matches to acidobacterial genomes; match to KM3_B4_19 | |
| AY214600_269 | 24458 | 24817 | | | anti-sigma-factor antagonist | | 1 | D | ADDED | | | | | PROTEIN | COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) | T Signal transduction mechanisms | | | 129.175.112.83 | 26/10/07 06:34:18 | one match in each acidobacterial genome; match to 41b15_22 and 23k22_21 | |
| AY214600_274 | 24792 | 25208 | | | ABC transporter related (partial) | | 1 | D | ADDED | | | | DUF140 | PROTEIN | COG0767 ABC-type transport system involved in resistance to organic solvents, permease component | Q Secondary metabolites biosynthesis, transport and catabolism | | | 129.175.112.83 | 26/10/07 06:37:05 | one match in each acidobacterial genome; match to 41b15_22 and 23k22_21 | |
| AY214600_16SRNA | | | | | 16S ribosomal RNA | | 1 | | ADDED | 16SrRNA | | | | RNA | | | | | 129.175.105.75 | 29/10/07 18:40:31 | | |
| AY214600_23SRNA | 10934 | 13894 | | | 23S ribosomal RNA | | 1 | D | ADDED | 23SrRNA | | | | RNA | | | | | 129.175.105.75 | 29/10/07 18:40:48 | | |
| AY214600_5SRNA | 13989 | 14105 | | | 5S ribosomal RNA | | 1 | D | ADDED | 5SrRNA | | | | RNA | | | | | 129.175.105.75 | 29/10/07 18:41:04 | | |
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