Name | start | end | Simlevel | Bestmatch | Description | Intein | Start codon | Strand | Status | Gene Name | EC | Gene Product | Comment | Item type | COG # | COG Function | Coding prob | Phylo Domain | Author | Time | More Comments |
name | startcoord | endcoord | * | * | de | intron | start1 | direction | status | gn | ec | gp | cc | type1 | kognum | kog | glimmer | dompat | auth | 10/10/03 00:00:00 | More Comments | |
| | | | | | | | | | | | | | | | | | | | 10/10/03 00:00:00 | | |
LUAcid_KM3_A5_18 | 5891 | 6631 | | | hypothetical protein | | 1 | D | ADDED | | | | | PROTEIN | | | Good | unique | 82.227.62.180 | 20/09/07 16:18:46 | - environment conserved in acidobacterial clones | |
LUAcid_KM3_A5_19 | 7091 | 8539 | | | hypothetical protein | | 1 | D | ADDED | | | | - putative lipoprotein | PROTEIN | | | Good | unique | 82.227.62.180 | 20/09/07 16:23:23 | - environment conserved in acidobacterial clones - to be verified | |
LUAcid_KM3_A5_20 | 8539 | 9987 | | | FAD linked oxidase protein | | 1 | D | ADDED | | | | - relationship to IPR004490 Glycolate oxidase subunit GlcD | PROTEIN | COG0277 FAD/FMN-containing dehydrogenases | C Energy production and conversion | Good | ABE | 82.227.62.180 | 20/09/07 16:36:13 | - environment conserved in acidobacterial clones - to be verified | |
LUAcid_KM3_A5_21 | 9921 | 11273 | | | FAD linked oxidase protein | | 1 | D | ADDED | | | | - relationship to IPR004490 Glycolate oxidase subunit GlcD | PROTEIN | COG0277 FAD/FMN-containing dehydrogenases | C Energy production and conversion | Good | ABE | 82.227.62.180 | 20/09/07 16:38:35 | - environment conserved in acidobacterial clones - to be verified - in tandem | |
LUAcid_KM3_A5_23 | 12870 | 13892 | | | Quinone oxidoreductase (NADPH:quinone reductase) | | 1 | D | ADDED | | | | IPR002085 Alcohol dehydrogenase superfamily, zinc-containing | PROTEIN | COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases | C Energy production and conversion | Good | | 82.227.62.180 | 20/09/07 16:44:45 | - environment conserved in acidobacterial clones - to be verified | |
LUAcid_KM3_A5_24 | 14109 | 14618 | | | Endoribonuclease L-PSP | | 1 | D | ADDED | | | | - length only conserved in Acidobacteria | PROTEIN | COG0251 Putative translation initiation inhibitor, yjgF family | J Translation, ribosomal structure and biogenesis | Good | unique | 82.227.62.180 | 20/09/07 16:51:25 | - environment conserved in acidobacterial clones - to be verified | |
LUAcid_KM3_A5_22 | 12589 | 11282 | | | Glycolate oxidase iron-sulfur subunit | | 1 | R | ADDED | | | | related to FAD linked oxidase | PROTEIN | COG0251 Putative translation initiation inhibitor, yjgF family | J Translation, ribosomal structure and biogenesis | Good | unique | 82.227.62.180 | 20/09/07 16:53:24 | - environment conserved in acidobacterial clones - to be verified | |
LUAcid_KM3_A5_25 | 14621 | 14902 | | | partial gamma-glutamyltransferase | | 1 | D | ADDED | | | | - C-terminal truncated protein | PROTEIN | COG0405 Gamma-glutamyltransferase | E Amino acid transport and metabolism | Good | | 82.227.62.180 | 20/09/07 16:56:28 | - environment conserved in acidobacterial clones - to be verified | |
LUAcid_KM3_A5_21 | 9921 | 11273 | | | FAD linked oxidase protein | | 25 | D | ADDED | | | | - relationship to IPR004490 Glycolate oxidase subunit GlcD | PROTEIN | COG0277 FAD/FMN-containing dehydrogenases | C Energy production and conversion | Good | ABE | 82.227.62.180 | 20/09/07 16:59:37 | - environment conserved in acidobacterial clones - to be verified - in tandem | |
| | | | | | | | | | | | | | | | | | | | 10/10/03 00:00:00 | | |
LUACID_KM3_A5_16SRNA | 192 | 1753 | | | 16S ribosomal RNA | | 1 | D | ADDED | 16SrRNA | | | | RNA | | | | | 129.175.105.75 | 29/10/07 17:34:56 | | |
LUACID_KM3_A5_23SRNA | 2356 | 5229 | | | 23S ribosomal RNA | | 1 | D | ADDED | 23SrRNA | | | | RNA | | | | | 129.175.105.75 | 29/10/07 17:35:18 | | |
LUACID_KM3_A5_5SRNA | 5469 | 5587 | | | 5S ribosomal RNA | | 1 | D | ADDED | 5SrRNA | | | | RNA | | | | | 129.175.105.75 | 29/10/07 17:35:46 | | |
LUACID_KM3_A5_TRNA1 | 1992 | 2065 | | | tRNA-Ile (GAT) | | 1 | D | ADDED | tRNA-Ile | | | | TRNA | | | | | 129.175.105.75 | 29/10/07 17:37:03 | | |
LUACID_KM3_A5_TRNA2 | 2130 | 2202 | | | tRNA-Ala (CGC) | | 1 | D | ADDED | tRNA-Ala | | | | TRNA | | | | | 129.175.105.75 | 29/10/07 17:37:42 | |