| | | | | | | | | | | | | | | | | | | | | 10/10/03 00:00:00 | | |
| LUAcid_AD248_D7_11 | 11602 | 12201 | | | phosphoribosylglycinamide formyltransferase (PurN) | | 1 | D | ADDED | | 2.1.2.2 | | best match to KM_D9_21 (87%id) | PROTEIN | COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN | F Nucleotide transport and metabolism | Good | ABE | 129.175.112.83 | 26/10/07 07:01:42 | matches to acidobacterial contigs | |
| LUAcid_AD248_D7_10 | 10531 | 11580 | | | phosphoribosylformylglycinamidine cyclo-ligase (PurM) | | 1 | D | ADDED | | 2.1.2.2 | | best match to KM_D9_20 (90%id) | PROTEIN | COG0150 Phosphoribosylaminoimidazole (AIR) synthetase | F Nucleotide transport and metabolism | Good | ABE | 129.175.112.83 | 26/10/07 07:05:43 | matches to acidobacterial contigs | |
| LUAcid_AD248_D7_09 | 9309 | 10514 | | | conserved hypothetical protein | | 1 | D | ADDED | | | | best match to KM_D9_19 (60%id); conserved only in Acidobacteria | PROTEIN | COG1413 FOG: HEAT repeat | C Energy production and conversion | Good | unique | 129.175.112.83 | 26/10/07 07:10:49 | matches to acidobacterial contigs; no match in acidobacterial genomes | |
| LUAcid_AD248_D7_10 | 10531 | 11580 | | | phosphoribosylformylglycinamidine cyclo-ligase (PurM) | | 1 | D | ADDED | | 6.3.3.1 | | best match to KM_D9_20 (90%id) | PROTEIN | COG0150 Phosphoribosylaminoimidazole (AIR) synthetase | F Nucleotide transport and metabolism | Good | ABE | 129.175.112.83 | 26/10/07 07:11:20 | matches to acidobacterial contigs | |
| LUAcid_AD248_D7_08 | 7858 | 9309 | | | amidophosphoribosyl transferase (PurF) | | 1 | D | ADDED | | 2.4.2.14 | | best match to KM_D9_18 (94%id) | PROTEIN | COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase | F Nucleotide transport and metabolism | Good | BE | 129.175.112.83 | 26/10/07 07:14:53 | matches to acidobacterial contigs; no match in acidobacterial genomes | |
| LUAcid_AD248_D7_08 | 7858 | 9309 | | | amidophosphoribosyl transferase (PurF) | | 1 | D | ADDED | | 2.4.2.14 | | best match to KM_D9_18 (94%id) | PROTEIN | COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase | F Nucleotide transport and metabolism | Good | BE | 129.175.112.83 | 26/10/07 07:18:38 | matches to acidobacterial contigs | |
| LUAcid_AD248_D7_06 | 4797 | 5420 | | | phosphoribosylformylglycinamidine synthase I (PurQ) | | 1 | D | ADDED | | 6.3.5.3 | | best match to KM_D9_16 (93%id) | PROTEIN | COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain | F Nucleotide transport and metabolism | Good | AB | 129.175.112.83 | 26/10/07 07:21:39 | matches to acidobacterial contigs | |
| LUAcid_AD248_D7_04 | 3251 | 4561 | | | adenylosuccinate lyase (PurB) | | 1 | D | ADDED | | 4.3.2.2 | | best match to KM_D9_14 (87%id) | PROTEIN | COG0015 Adenylosuccinate lyase | F Nucleotide transport and metabolism | Good | AB | 129.175.112.83 | 26/10/07 07:25:39 | matches to acidobacterial contigs | |
| LUAcid_AD248_D7_03 | 2403 | 3239 | | | beta-lactamase like protein | | 1 | D | ADDED | | | | best match to KM_D9_13 (85%id) | PROTEIN | COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I | R General function prediction only | Good | | 129.175.112.83 | 26/10/07 07:28:07 | matches to acidobacterial contigs | |
| LUAcid_AD248_D7_02 | 1106 | 2362 | | | peptidase M16 domain protein | | 1 | D | ADDED | | | | best match to KM_D9_12 (89%id) | PROTEIN | COG0612 Predicted Zn-dependent peptidases | R General function prediction only | Good | | 129.175.112.83 | 26/10/07 07:30:10 | matches to acidobacterial contigs | |
| LUAcid_AD248_D7_07 | 5615 | 7831 | | | phosphoribosylformylglycinamidine synthase II (PurL) | | 1 | D | ADDED | | 6.3.5.3 | | best match KM3_D9_17 (89%id) | PROTEIN | COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain | F Nucleotide transport and metabolism | Good | AB | 129.175.112.83 | 26/10/07 07:34:58 | | |
| LUAcid_AD248_D7_05 | 4561 | 4797 | | | phosphoribosylformylglycinamidine synthase I (PurS) | | 1 | D | ADDED | | 6.3.5.3 | | best match KM3_D9_15 (89%id) | PROTEIN | COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component | F Nucleotide transport and metabolism | Good | AB | 129.175.112.83 | 26/10/07 07:37:14 | | |
| LUAcid_AD248_D7_13 | 19345 | 20079 | | | hypothetical protein | | 1 | D | ADDED | | | | best match to KM3_D9_23 (82%id); no COG | PROTEIN | | | Good | unique | 129.175.112.83 | 26/10/07 08:02:34 | conserved in acidobacterial deep sea contigs; one good match to Ellin345; not in Solibacter | |
| LUAcid_AD248_D7_14 | 21066 | 20089 | | | Alcohol dehydrogenase GroES domain protein | | 1 | R | ADDED | | | | best match to KM3_D9_24 (81%id) | PROTEIN | COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases | E Amino acid transport and metabolism | Good | AB | 129.175.112.83 | 26/10/07 08:08:47 | | |
| LUAcid_AD248_D7_15 | 21188 | 22645 | | | conserved hypothetical protein | | 1 | D | ADDED | | | | best match to KM3_D9_25 (91%id); no COG; putative lipoprotein; some lower matches in E | PROTEIN | | | Good | B | 129.175.112.83 | 26/10/07 08:15:32 | conserved in acidobacterial deep sea clones; conserved in some groups of Bacteria | |
| LUAcid_AD248_D7_16 | 22626 | 24131 | | | FAD linked oxidase domain protein | | 1 | D | ADDED | | | | best match to KM3_D9_26 (88%id); N-terminal; linked to adjacent FAD linked oxidase domain protein; also lactate DH-related | PROTEIN | COG0277 FAD/FMN-containing dehydrogenases | C Energy production and conversion | Good | B | 129.175.112.83 | 26/10/07 08:21:04 | conserved in acidobacterial deep sea clones; conserved in some groups of Bacteria | |
| LUAcid_AD248_D7_17 | 24134 | 25414 | | | FAD linked oxidase domain protein | | 1 | D | ADDED | | | | best match to KM3_D9_27 (93%id); C-terminal; linked to adjacent FAD linked oxidase domain protein; also lactate DH-related | PROTEIN | COG0277 FAD/FMN-containing dehydrogenases | C Energy production and conversion | Good | B | 129.175.112.83 | 26/10/07 08:22:32 | conserved in acidobacterial deep sea clones; conserved in some groups of Bacteria | |
| LUAcid_AD248_D7_18 | 26763 | 25438 | | | glycolate oxidase iron-sulfur subunit | | 1 | R | ADDED | | | | best match to KM3_D9_28 (88%id); C-terminal; linked to adjacent FAD linked oxidase domain protein; the three proteins seems to be 3 subunits | PROTEIN | COG0247 Fe-S oxidoreductase | C Energy production and conversion | Good | B | 129.175.112.83 | 26/10/07 08:26:55 | conserved in acidobacterial deep sea clones; conserved in some groups of Bacteria | |
| LUAcid_AD248_D7_19 | 26880 | 27857 | | | Alcohol dehydrogenase, zinc-binding domain protein | | 1 | D | ADDED | | | | best match to KM3_D9_29 (86%id) | PROTEIN | COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases | C Energy production and conversion | Good | | 129.175.112.83 | 26/10/07 08:28:42 | | |
| LUAcid_AD248_D7_20 | 27878 | 28345 | | | Endoribonuclease L-PSP | | 1 | D | ADDED | | | | best match to KM3_D9_30 (93%id) | PROTEIN | COG0024 Methionine aminopeptidase | J Translation, ribosomal structure and biogenesis | Good | | 129.175.112.83 | 26/10/07 08:30:18 | | |
| LUAcid_AD248_D7_21 | 28444 | 29259 | | | protein of unknown function DUF323 | | 1 | D | ADDED | | | | sulfatase modifying factor | PROTEIN | COG1262 Uncharacterized conserved protein | S Function unknown | Good | BE | 129.175.112.83 | 26/10/07 09:22:34 | | |
| LUAcid_AD248_D7_22 | 29440 | 31392 | | | thiamine pyrophosphate-requiring enzyme | | 1 | D | ADDED | | | | best match KM3_G1_22 (86%id) | PROTEIN | COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] | E Amino acid transport and metabolism | Good | ABE | 129.175.112.83 | 26/10/07 09:28:16 | | |
| LUAcid_AD248_D7_23 | 31403 | 31906 | | | thiamine pyrophosphate-requiring enzyme | | 1 | D | ADDED | | | | best match KM3_G1_23 (360) (61%id); no COG | PROTEIN | | | Good | unique | 129.175.112.83 | 26/10/07 09:30:44 | acidobacterial deep-sea specific protein | |
| LUAcid_AD248_D7_24 | 31845 | 32339 | | | hypothetical protein | | 29 | D | ADDED | | | | best match KM3_G1_23 (71%id) | PROTEIN | COG2010 Cytochrome c, mono- and diheme variants | C Energy production and conversion | Good but overlapping | unique | 129.175.112.83 | 26/10/07 09:35:58 | | |
| LUAcid_AD248_D7_25 | 32393 | 32872 | | | acetyltransferase (GNAT) family protein | | 1 | D | ADDED | | | | best match KM3_B8D2_28 (67%id) | PROTEIN | COG0454 Histone acetyltransferase HPA2 and related acetyltransferases | K Transcription | Good | AB | 129.175.112.83 | 26/10/07 09:38:53 | | |
| LUAcid_AD248_D7_26 | 35056 | 32945 | | | Quinoprotein glucose dehydrogenase | | 1 | R | ADDED | | | | best match KM3_B8D2_29 (86%id) | PROTEIN | COG4993 Glucose dehydrogenase | G Carbohydrate transport and metabolism | Good | B | 129.175.112.83 | 26/10/07 09:40:44 | | |
| lUAcid_AD248_D7_16SRNA | 13861 | 15408 | | | 16S ribosomal RNA | | 1 | D | ADDED | 16SrRNA | | | | RNA | | | - | | 129.175.105.75 | 29/10/07 18:34:56 | | |
| lUAcid_AD248_D7_23SRNA | 15921 | 18905 | | | 23S ribosomal RNA | | 1 | D | ADDED | 23SrRNA | | | | RNA | | | - | | 129.175.105.75 | 29/10/07 18:36:09 | | |
| lUAcid_AD248_D7_5SRNA | 19059 | 19175 | | | 5S ribosomal RNA | | 1 | D | ADDED | 5SrRNA | | | | RNA | | | - | | 129.175.105.75 | 29/10/07 18:36:38 | | |
| lUAcid_AD248_D7_TRNA1 | 15531 | 15607 | | | tRNA-Ile (GAT) | | 1 | D | ADDED | tRNA-Ile | | | | TRNA | | | - | | 129.175.105.75 | 29/10/07 18:38:14 | | |
| lUAcid_AD248_D7_TRNA2 | 15619 | 15694 | | | tRNA-Ala (TGC) | | 1 | D | ADDED | tRNA-Ala | | | | TRNA | | | - | | 129.175.105.75 | 29/10/07 18:38:55 | | |
| LUACID_AD248_D7_01 | 964 | 1 | | | radical SAM enzyme, Cfr family (partial) | | 1 | R | ADDED | | | | best match KM3_D9_11 (85%id); often in tandem with peptidase M16 domain protein | PROTEIN | COG0820 Predicted Fe-S-cluster redox enzyme | R General function prediction only | Good | | 82.227.62.180 | 04/11/07 04:39:08 | | |
| LUACID_AD248_D7_17 | 24134 | 25414 | | | Glycolate oxidase subunit (GlcD) | | 1 | D | ADDED | | | | best match to KM3_D9_27 (93%id); C-terminal; linked to adjacent FAD linked oxidase domain protein; also lactate DH-related | PROTEIN | COG0277 FAD/FMN-containing dehydrogenases | C Energy production and conversion | Good | B (only bacteria) | 82.227.62.180 | 13/12/07 17:46:28 | conserved in acidobacterial deep sea clones; conserved in some groups of Bacteria | |
| LUACID_AD248_D7_16 | 22626 | 24131 | | | Glycolate oxidase subunit (GlcE) | | 1 | D | ADDED | | | | best match to KM3_D9_26 (88%id); N-terminal; linked to adjacent FAD linked oxidase domain protein; also lactate DH-related | PROTEIN | COG0277 FAD/FMN-containing dehydrogenases | C Energy production and conversion | Good | B (only bacteria) | 82.227.62.180 | 13/12/07 17:47:01 | conserved in acidobacterial deep sea clones; conserved in some groups of Bacteria | |
| LUACID_AD248_D7_17 | 24134 | 25414 | | | Glycolate oxidase subunit (GlcF) | | 1 | D | ADDED | | | | best match to KM3_D9_27 (93%id); C-terminal; linked to adjacent FAD linked oxidase domain protein; also lactate DH-related | PROTEIN | COG0277 FAD/FMN-containing dehydrogenases | C Energy production and conversion | Good | B (only bacteria) | 82.227.62.180 | 13/12/07 17:47:19 | conserved in acidobacterial deep sea clones; conserved in some groups of Bacteria | |
| LUACID_AD248_D7_16 | 22626 | 24131 | | | Glycolate oxidase subunit (GlcD) | | 1 | D | ADDED | | | | best match to KM3_D9_26 (88%id); N-terminal; linked to adjacent FAD linked oxidase domain protein; also lactate DH-related | PROTEIN | COG0277 FAD/FMN-containing dehydrogenases | C Energy production and conversion | Good | B (only bacteria) | 82.227.62.180 | 13/12/07 17:47:35 | conserved in acidobacterial deep sea clones; conserved in some groups of Bacteria | |
| LUACID_AD248_D7_17 | 24134 | 25414 | | | Glycolate oxidase subunit (GlcE) | | 1 | D | ADDED | | | | best match to KM3_D9_27 (93%id); C-terminal; linked to adjacent FAD linked oxidase domain protein; also lactate DH-related | PROTEIN | COG0277 FAD/FMN-containing dehydrogenases | C Energy production and conversion | Good | B (only bacteria) | 82.227.62.180 | 13/12/07 17:47:49 | conserved in acidobacterial deep sea clones; conserved in some groups of Bacteria | |
| LUACID_AD248_D7_18 | 26763 | 25438 | | | glycolate oxidase iron-sulfur subunit (GlcF) | | 1 | R | ADDED | | | | best match to KM3_D9_28 (88%id); C-terminal; linked to adjacent FAD linked oxidase domain protein; the three proteins seems to be 3 subunits | PROTEIN | COG0247 Fe-S oxidoreductase | C Energy production and conversion | Good | B (only bacteria) | 82.227.62.180 | 13/12/07 17:48:51 | conserved in acidobacterial deep sea clones; conserved in some groups of Bacteria | |
| LUACID_AD248_D7_24 | 31929 | 32339 | | | hypothetical protein | | 29 | D | ADDED | | | | best match KM3_G1_23 (71%id) | PROTEIN | COG1413 FOG: HEAT repeat | C Energy production and conversion | Good but overlapping | unique | 129.175.105.75 | 17/12/07 16:05:10 | fixed COG -yz | |
| LUACID_AD248_D7_24 | 31929 | 32339 | | | hypothetical protein | | 29 | D | ADDED | | | | best match KM3_G1_23 (71%id) | PROTEIN | | | Good but overlapping | unique | 129.175.105.75 | 17/12/07 16:05:30 | fixed COG -yz | |
| LUACID_AD248_D7_24 | 31929 | 32339 | | | Cyt c, alcohol dehydrogenase subunit | | 29 | D | ADDED | | | | best match KM3_G1_23 (71%id) | PROTEIN | | | Good but overlapping | unique | 82.227.62.180 | 18/12/07 17:25:40 | fixed COG -yz | |
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