ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI0082 good H KOG3210 Coenzyme transport and metabolism Imidazoleglycerol-phosphate synthase subunit H-like
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI0082 27238 26585 -218
(218 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YFL060c [H] KOG3210 Imidazoleglycerol-phosphate synthase subunit... 248 4e-66
YNL334c [H] KOG3210 Imidazoleglycerol-phosphate synthase subunit... 247 8e-66
YMR095c [H] KOG3210 Imidazoleglycerol-phosphate synthase subunit... 242 3e-64
SPAC222.08c [H] KOG3210 Imidazoleglycerol-phosphate synthase sub... 121 6e-28
At5g60540 [H] KOG3210 Imidazoleglycerol-phosphate synthase subun... 115 6e-26
>YFL060c [H] KOG3210 Imidazoleglycerol-phosphate synthase subunit H-like
Length = 222
Score = 248 bits (634), Expect = 4e-66
Identities = 128/219 (58%), Positives = 161/219 (73%), Gaps = 10/219 (4%)
Query: 10 MTKRIGVLALQGAFAEHIALLNKAIEDNKHDIE----VITVKTAPQLSSCDSLIIPGGES 65
MT IGVLALQGAF EH+ + K I +N+ E V+TVK QL+ CD+LIIPGGES
Sbjct: 1 MTVVIGVLALQGAFIEHVRHVEKCIVENRDFYEKKLSVMTVKDKNQLAQCDALIIPGGES 60
Query: 66 TTISLIAKRTGLFDSLIEFVHDPTKTVWGTCAGLIFLAKQLSNESSLVNSLDLLKVKVRR 125
T +SLIA+RTG +D L FVH+P+K WGTCAGLI++++QLSNE+ LV +L+LLKVKV+R
Sbjct: 61 TAMSLIAERTGFYDDLYAFVHNPSKVTWGTCAGLIYISQQLSNEAKLVKTLNLLKVKVKR 120
Query: 126 NAFGRQAESFIETCDFSSFIPDCTGFQVYFIRAPIIEEILSQDDVETLYTL--KDGS--- 180
NAFGRQA+S CDFS+FIP C F FIRAP+IEE+L + V+ LY L KD
Sbjct: 121 NAFGRQAQSSTRICDFSNFIPHCNDFPATFIRAPVIEEVLDPEHVQVLYKLDGKDNGGQE 180
Query: 181 -IVAVSQQGRILGTSFHPELSDNDARFHNYFIQKFVLNN 218
IVA Q+ IL TSFHPEL++ND RFH++FI++FVL N
Sbjct: 181 LIVAAKQKNNILATSFHPELAENDIRFHDWFIREFVLKN 219
>YNL334c [H] KOG3210 Imidazoleglycerol-phosphate synthase subunit H-like
Length = 222
Score = 247 bits (631), Expect = 8e-66
Identities = 127/219 (57%), Positives = 160/219 (72%), Gaps = 10/219 (4%)
Query: 10 MTKRIGVLALQGAFAEHIALLNKAIEDNKHDIE----VITVKTAPQLSSCDSLIIPGGES 65
MT IGVLALQGAF EH+ + K I +N+ E V+TVK QL+ CD+LIIPGGES
Sbjct: 1 MTVVIGVLALQGAFIEHVRHVEKCIVENRDFYEKKLSVMTVKDKNQLAQCDALIIPGGES 60
Query: 66 TTISLIAKRTGLFDSLIEFVHDPTKTVWGTCAGLIFLAKQLSNESSLVNSLDLLKVKVRR 125
T +SLIA+RTG +D L FVH+P+K WGTCAG+I++++QLSNE LV +L+LLKVKV+R
Sbjct: 61 TAMSLIAERTGFYDDLYAFVHNPSKVTWGTCAGMIYISQQLSNEEKLVKTLNLLKVKVKR 120
Query: 126 NAFGRQAESFIETCDFSSFIPDCTGFQVYFIRAPIIEEILSQDDVETLYTL--KDGS--- 180
NAFGRQA+S CDFS+FIP C F FIRAP+IEE+L + V+ LY L KD
Sbjct: 121 NAFGRQAQSSTRICDFSNFIPHCNDFPATFIRAPVIEEVLDPEHVQVLYKLDGKDNGGQE 180
Query: 181 -IVAVSQQGRILGTSFHPELSDNDARFHNYFIQKFVLNN 218
IVA Q+ IL TSFHPEL++ND RFH++FI++FVL N
Sbjct: 181 LIVAAKQKNNILATSFHPELAENDIRFHDWFIREFVLKN 219
>YMR095c [H] KOG3210 Imidazoleglycerol-phosphate synthase subunit H-like
Length = 224
Score = 242 bits (618), Expect = 3e-64
Identities = 128/212 (60%), Positives = 158/212 (74%), Gaps = 7/212 (3%)
Query: 12 KRIGVLALQGAFAEHIALLNKAIEDNKHDI--EVITVKTAPQLSSCDSLIIPGGESTTIS 69
K IGVLALQGAF EH L + + +N + I E+ TVKT L+ CD+LIIPGGEST++S
Sbjct: 14 KVIGVLALQGAFLEHTNHLKRCLAENDYGIKIEIKTVKTPEDLAQCDALIIPGGESTSMS 73
Query: 70 LIAKRTGLFDSLIEFVHDPTKTVWGTCAGLIFLAKQLSNESSLVNSLDLLKVKVRRNAFG 129
LIA+RTGL+ L EFVH+P K VWGTCAGLIFL+ QL NES+LV +L +LKV VRRNAFG
Sbjct: 74 LIAQRTGLYPCLYEFVHNPEKVVWGTCAGLIFLSAQLENESALVKTLGVLKVDVRRNAFG 133
Query: 130 RQAESFIETCDFSSFIPDCTGFQVYFIRAPIIEEILSQDDVETLYTL----KDGSIVAVS 185
RQA+SF + CDFS+FIP C F FIRAP+IE IL V++LY L KD +VA +
Sbjct: 134 RQAQSFTQKCDFSNFIPGCDNFPATFIRAPVIERILDPIAVKSLYELPVNGKD-VVVAAT 192
Query: 186 QQGRILGTSFHPELSDNDARFHNYFIQKFVLN 217
Q IL TSFHPEL+D+D RFH++FI++FV N
Sbjct: 193 QNHNILVTSFHPELADSDTRFHDWFIRQFVSN 224
>SPAC222.08c [H] KOG3210 Imidazoleglycerol-phosphate synthase subunit H-like
Length = 234
Score = 121 bits (304), Expect = 6e-28
Identities = 88/222 (39%), Positives = 121/222 (53%), Gaps = 25/222 (11%)
Query: 8 TMMTKRIGVLALQGAFAEHIALLNKAIEDNKHDIEVITVKTAPQLSSCDSLIIPGGESTT 67
+ + RIGVLALQGAF EHI ++N + VKTA + D LIIPGGESTT
Sbjct: 18 SQLKARIGVLALQGAFIEHINIMNSI-----DGVISFPVKTAKDCENIDGLIIPGGESTT 72
Query: 68 ISLIAKRTGLFDSLIEFVHDPTKTVWGTCAGLIFLAKQLSN----ESSLVNSLDLLKVKV 123
I + +E + D +WGTCAG+I L+K+ + L+ ++D ++V
Sbjct: 73 IGKLINIDEKLRDRLEHLVDQGLPIWGTCAGMILLSKKSRGGKFPDPYLLRAMD---IEV 129
Query: 124 RRNAFGRQAESF------IETCDFSSFIPDCTGFQVYFIRAPIIEEILSQDDVETLYTL- 176
RN FG Q SF E+ F + P F FIRAP+ ILS DD+ L T+
Sbjct: 130 TRNYFGPQTMSFTTDITVTESMQFEATEP-LHSFSATFIRAPVASTILS-DDINVLATIV 187
Query: 177 --KDGSIVAVSQQGRILGTSFHPELSDNDARFHNYFIQKFVL 216
+ IVAV +QG LGTSFHPEL+ D R+H +++++ VL
Sbjct: 188 HEGNKEIVAV-EQGPFLGTSFHPELT-ADNRWHEWWVKERVL 227
>At5g60540 [H] KOG3210 Imidazoleglycerol-phosphate synthase subunit H-like
Length = 253
Score = 115 bits (287), Expect = 6e-26
Identities = 84/226 (37%), Positives = 120/226 (52%), Gaps = 40/226 (17%)
Query: 14 IGVLALQGAFAEHIALLNKAIEDNKHDIEVITVKTAPQLSSCDSLIIPGGESTTISLIAK 73
+GVLALQG+F EHIA L + ++ + ++ A QL + SLIIPGGESTT++ +A+
Sbjct: 3 VGVLALQGSFNEHIAALRRL------GVQGVEIRKADQLLTVSSLIIPGGESTTMAKLAE 56
Query: 74 RTGLFDSLIEFVHDPTKTVWGTCAGLIFLAKQLSNESSLVNSLDLLKVKVRRNAFGRQAE 133
LF +L EFV K VWGTCAGLIFLA + + LV LD V RN FG Q
Sbjct: 57 YHNLFPALREFV-KMGKPVWGTCAGLIFLADRAVGQ-ELVGGLD---CTVHRNFFGSQVM 111
Query: 134 SFIETCDFSSFIPDCTG-------FQVYFIRAPIIEEILSQDDV---------ETLYT-- 175
S + +P T ++ FIRAP + ++ +V + LY+
Sbjct: 112 S-LTKIPADILVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKVLYSSS 170
Query: 176 ---------LKDGSIVAVSQQGRILGTSFHPELSDNDARFHNYFIQ 212
L + ++ +QG +L T+FHPEL+ D R+H+YFI+
Sbjct: 171 TVQIQEEDALPETKVIVAVKQGNLLATAFHPELT-ADTRWHSYFIK 215
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.322 0.137 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,845,190
Number of Sequences: 60738
Number of extensions: 449158
Number of successful extensions: 1122
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1106
Number of HSP's gapped (non-prelim): 5
length of query: 218
length of database: 30,389,216
effective HSP length: 102
effective length of query: 116
effective length of database: 24,193,940
effective search space: 2806497040
effective search space used: 2806497040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)