ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI0208 good A KOG2777 RNA processing and modification tRNA-specific adenosine deaminase 1
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI0208 74187 75326 380
(380 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL243w [A] KOG2777 tRNA-specific adenosine deaminase 1 293 2e-79
SPBC16A3.06 [A] KOG2777 tRNA-specific adenosine deaminase 1 172 1e-42
At1g01760 [A] KOG2777 tRNA-specific adenosine deaminase 1 88 2e-17
7298094 [A] KOG2777 tRNA-specific adenosine deaminase 1 88 2e-17
Hs4501919 [A] KOG2777 tRNA-specific adenosine deaminase 1 68 3e-11
Hs6912230 [A] KOG2777 tRNA-specific adenosine deaminase 1 66 7e-11
Hs7669475 [A] KOG2777 tRNA-specific adenosine deaminase 1 65 1e-10
Hs7669473 [A] KOG2777 tRNA-specific adenosine deaminase 1 65 1e-10
Hs4501917 [A] KOG2777 tRNA-specific adenosine deaminase 1 65 1e-10
Hs8922077 [A] KOG2777 tRNA-specific adenosine deaminase 1 64 3e-10
Hs7669479 [A] KOG2777 tRNA-specific adenosine deaminase 1 63 6e-10
Hs7669477 [A] KOG2777 tRNA-specific adenosine deaminase 1 63 6e-10
7290203 [A] KOG2777 tRNA-specific adenosine deaminase 1 61 2e-09
>YGL243w [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 400
Score = 293 bits (751), Expect = 2e-79
Identities = 166/384 (43%), Positives = 224/384 (58%), Gaps = 17/384 (4%)
Query: 4 IADRIAASVISAYDKLPKSGKPGIRSNGVTEWTVLSGIVAF--DELNDRYEPISLGTGVK 61
+ + I+ VI+ Y KL + +P IR +G+ EWT+L+G+ A D ++ E +S+ TGVK
Sbjct: 23 LGEEISTRVINEYSKLKSACRPIIRPSGIREWTILAGVAAINRDGGANKIEILSIATGVK 82
Query: 62 ATPNEELQRSNGQIVHDCHAEVICLRAFNALLLKEICDLQNGQKSFLIEKSAD---GYKV 118
A P+ ELQRS G+I+HDCHAE++ LR N +LL I + I+ + + + +
Sbjct: 83 ALPDSELQRSEGKILHDCHAEILALRGANTVLLNRIQNYNPSSGDKFIQHNDEIPARFNL 142
Query: 119 KDVWKFAMYISRIPCGDASMNLLEAEDKSECENCQQVGNIFING----QYVHPEIDTIIR 174
K+ W+ A+YISR+PCGDASM+ L +NC+ I I QYV + TI+R
Sbjct: 143 KENWELALYISRLPCGDASMSFLN-------DNCKNDDFIKIEDSDEFQYVDRSVKTILR 195
Query: 175 GRANYKLRKVVRTKPGRADSKITLSKSCSDKLTMKQMISICNALTWSLLQSPVYLEWIVL 234
GR N+ R VVRTKPGR DS ITLSKSCSDKL MKQ S+ N L + L + PV+L++IV+
Sbjct: 196 GRLNFNRRNVVRTKPGRYDSNITLSKSCSDKLLMKQRSSVLNCLNYELFEKPVFLKYIVI 255
Query: 235 PKQYQYEQVQLEDTFWLRLKNQQFLPFKFLFCNETFSADRTNLSQQPSLSSCVSLYGSNE 294
P + LE +F RL N KFL C + F D+ + P L V L+ +
Sbjct: 256 PNLEDETKHHLEQSFHTRLPNLD-NEIKFLNCLKPFYDDKLDEEDVPGLMCSVKLFMDDF 314
Query: 295 AVSEVILNGVKNGFYVKGKKPLRKGCQSIISRCAQWSAFKKIKAMPSDTDYYGFKSSVVD 354
+ E ILNGV+NGFY K KPLRK CQS +SR AQW FKKI+ Y FKS
Sbjct: 315 STEEAILNGVRNGFYTKSSKPLRKHCQSQVSRFAQWELFKKIRPEYEGISYLEFKSRQKK 374
Query: 355 RNHIISKAKATLSASGWISTCRDN 378
R+ +I K LS GWI T D+
Sbjct: 375 RSQLIIAIKNILSPDGWIPTRTDD 398
>SPBC16A3.06 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 388
Score = 172 bits (435), Expect = 1e-42
Identities = 122/373 (32%), Positives = 205/373 (54%), Gaps = 42/373 (11%)
Query: 4 IADRIAASVISAYDKLPKSGKPGIRSNGVTEWTVLSGIVAFDELNDRYEPISLGTGVKAT 63
+ + IA +V++ +D+L + GKP IR+NGV EWT L+G+V ++ + + + L TGVK T
Sbjct: 12 VGNLIALAVLNKFDELARHGKPIIRANGVREWTTLAGVVIQKKMENEFICVCLATGVKCT 71
Query: 64 P-----NEELQRSNGQIVHDCHAEVICLRAFNALLLKEICDLQNGQK-SFLIEKSADG-Y 116
P NE+L G ++HDCHAE++ LR FN LLL+ ++ +K ++L+E + +G +
Sbjct: 72 PAGIIKNEQL----GSVLHDCHAEILALRCFNRLLLEHCILIKESKKDTWLLEVADNGKF 127
Query: 117 KVKDVWKFAMYISRIPCGDASMNLLEAEDKSECENCQQVGNIFINGQYVHPEIDTIIRGR 176
+ +Y+S PCGDASM LL S EN + N+ ++ + ++RGR
Sbjct: 128 TLNSNLLIHLYVSECPCGDASMELL----ASRLEN-NKPWNLTVDS-------EKLMRGR 175
Query: 177 ANYKLRKVVRTKPGRADSKITLSKSCSDKLTMKQMISICNALTWSLLQSPVYLEWIVLPK 236
A++ L +VRTKPGR D+ ++ SKSC+DKL KQ +SI N+ T SL+ P+YL +VL K
Sbjct: 176 ADFGLLGIVRTKPGRPDAPVSWSKSCTDKLAAKQYLSILNSQT-SLICEPIYLSCVVLYK 234
Query: 237 QY-----------QYEQVQLEDTFWLRLKNQQFLPFKFLFCNETFSADR-TNLSQQPSLS 284
+ + + F + F PF L +E F R N +++ + S
Sbjct: 235 KVIVKSAIDRAFGPFGRCAPLAEFGEKDNPYYFHPFTVLETDENFLYSRPLNQAEKTATS 294
Query: 285 SCVSLY-GSNEAVSEVILNGVKNGFYVKGKKPLRKGCQSIISRCAQWSAFKKI-KAMPSD 342
+ V ++ G ++VI NG+K G K + Q++I R + + ++ +++ ++
Sbjct: 295 TNVLIWIGDKMQCTQVIHNGIKAGTKAKDVEK----SQTLICRKSMMNLLHQLSQSLTNE 350
Query: 343 TDYYGFKSSVVDR 355
+YY +K + R
Sbjct: 351 KNYYEWKKLNIKR 363
>At1g01760 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 325
Score = 88.2 bits (217), Expect = 2e-17
Identities = 81/232 (34%), Positives = 113/232 (47%), Gaps = 25/232 (10%)
Query: 8 IAASVISAYDKLPKSGKPGIRSNGVTEWTVLSGIVAFDELNDRYEPISLGTGVKATPNEE 67
++ VISAY LPK GKP R E TVLS + D + I+LGTG K
Sbjct: 9 VSEKVISAYMSLPKKGKPQGR-----EVTVLSAFLVSSPSQDP-KVIALGTGTKCVSGSL 62
Query: 68 LQRSNGQIVHDCHAEVICLRAFNALLLKEICDLQ--NGQKSFLIEKSADG---YKVKDVW 122
L G IV+D HAEV+ RA EI +Q +G+KS + S G YK+K
Sbjct: 63 LS-PRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKKS--ADSSCPGEVKYKLKSGC 119
Query: 123 KFAMYISRIPCGDASMNLLEAEDKSECENCQQVGNIFINGQYVHPEIDTIIRGRANYKLR 182
+YIS++PC NL D S Q +I + PEI + ++
Sbjct: 120 LLHLYISQLPC-----NLPSILDDSLLV---QASDICSSRHSDVPEIGSNSNKGNGSQVA 171
Query: 183 KVVRTKPGRADSKITLSKSCSDKLTMKQMISICNALTWSLLQSPVYLEWIVL 234
+V+ KPGR ++ TLS SCSDK+ ++ + AL + +LQ PVY+ I +
Sbjct: 172 DMVQRKPGRGET--TLSVSCSDKIARWNVLGVQGALLYQVLQ-PVYISTITV 220
>7298094 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 394
Score = 88.2 bits (217), Expect = 2e-17
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 8 IAASVISAYDKLPKSGKPGIRSNGVTEWTVLSGIVAFDELNDRYEPISLGTGVKATPNEE 67
IA + ++ LPK+GKP +WT+L+GIV F+ + + +SLG G K +
Sbjct: 12 IAELCLKKFESLPKTGKPT-----ANQWTILAGIVEFNRNTEACQLVSLGCGTKCIGESK 66
Query: 68 LQRSNGQIVHDCHAEVICLRAFNALLLKEICDLQNGQKSFLIEKSADGYKVKDVWKFAMY 127
L NG I++D HAEV+ R F L +E+ + F + Y + + +F
Sbjct: 67 L-CPNGLILNDSHAEVLARRGFLRFLYQEL----KQDRIFHWNSTLSTYDMDEHVEFHFL 121
Query: 128 ISRIPCGDASMNLLEAEDKSECENCQQVGNIFINGQYVHPEIDTIIRGRANYKLRKVVRT 187
++ PCGDA +LE E + Q++ Y ++ + + + +RT
Sbjct: 122 STQTPCGDAC--ILEEEQPAARAKRQRLDE-DSEMVYTGAKLISDLSDDPMLQTPGALRT 178
Query: 188 KPGRADSKITLSKSCSDKLTMKQMISICNALTWSLLQSPVY 228
KPGR + TLS SCSDK+ +I + AL L+ P+Y
Sbjct: 179 KPGRGER--TLSMSCSDKIARWNVIGVQGALLDVLISKPIY 217
>Hs4501919 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 701
Score = 67.8 bits (164), Expect = 3e-11
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 20/264 (7%)
Query: 3 VIADRIAASVISAYDKLPKS-GKPGIRSNGVTEWTVLSGIVAFDELNDR-YEPISLGTGV 60
V+AD ++ V+ + L + P R VL+G+V + + + IS+ TG
Sbjct: 322 VLADAVSRLVLGKFGDLTDNFSSPHARRK------VLAGVVMTTGTDVKDAKVISVSTGT 375
Query: 61 KATPNEELQRSNGQIVHDCHAEVICLRAFNALLLKEI---CDLQNGQKSFLIEKSA-DGY 116
K N E G ++DCHAE+I R+ L ++ + ++ QK + +KS G+
Sbjct: 376 KCI-NGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGGF 434
Query: 117 KVKDVWKFAMYISRIPCGDASMNLLEAEDKSECENCQQVGNIFINGQYVHPEIDTIIRGR 176
++K+ +F +YIS PCGDA + + E + N GQ + +I++ G
Sbjct: 435 RLKENVQFHLYISTSPCGDA--RIFSPHEPILEEPADRHPNRKARGQ-LRTKIES-GEGT 490
Query: 177 ANYKLRKVVRTKPGRADSKITLSKSCSDKLTMKQMISICNALTWSLLQSPVYLEWIVLPK 236
+ ++T G + L+ SCSDK+ ++ I +L S+ P+Y I+L
Sbjct: 491 IPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLL-SIFVEPIYFSSIILGS 549
Query: 237 QYQYEQVQLEDTFWLRLKNQQFLP 260
Y + L + R+ N + LP
Sbjct: 550 LYHGD--HLSRAMYQRISNIEDLP 571
>Hs6912230 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 502
Score = 66.2 bits (160), Expect = 7e-11
Identities = 54/165 (32%), Positives = 75/165 (44%), Gaps = 29/165 (17%)
Query: 5 ADRIAASVISAYD-KLPKSGKPGIRSNGVTEWTVLSGIVAFDELNDRY------------ 51
AD IA Y +LPK GKP EWT+L+ +V D+
Sbjct: 4 ADEIAQLCYEHYGIRLPKKGKPEPNH----EWTLLAAVVKIQSPADKACDTPDKPVQVTK 59
Query: 52 EPISLGTGVKATPNEELQRSNGQIVHDCHAEVICLRAFNALLLKEICDLQNGQKSFLIEK 111
E +S+GTG K ++ R NG I++D HAEVI R+F LL ++ ++ +
Sbjct: 60 EIVSMGTGTKCIGQSKM-RKNGDILNDSHAEVIARRSFQRYLLHQLQLAATLKEDSIFVP 118
Query: 112 SADGYKVKDVWK------FAMYISRIPCGDAS-MNLLEAEDKSEC 149
K VWK F + S PCGDAS + +LE ED+ C
Sbjct: 119 GTQ----KGVWKLRRDLIFVFFSSHTPCGDASIIPMLEFEDQPCC 159
>Hs7669475 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 1181
Score = 65.5 bits (158), Expect = 1e-10
Identities = 61/235 (25%), Positives = 103/235 (42%), Gaps = 15/235 (6%)
Query: 6 DRIAASVISAYDKLPKSGKPGIRSNGVTEWTVLSGIVAFDELNDRYEPISLGTGVKATPN 65
D+IA ++ L S +P + +L+ I+ + D +SLGTG +
Sbjct: 797 DQIAMLSHRCFNTLTNSFQPSLLGR-----KILAAIIMKKDSEDMGVVVSLGTGNRCVKG 851
Query: 66 EELQRSNGQIVHDCHAEVICLRAFNALLLKEICDLQN-GQKSFLIEKSADGYK--VKDVW 122
+ L G+ V+DCHAE+I R F L E+ + K + E + G K +K
Sbjct: 852 DSLSLK-GETVNDCHAEIISRRGFIRFLYSELMKYNSQTAKDSIFEPAKGGEKLQIKKTV 910
Query: 123 KFAMYISRIPCGDASMNLLEAEDKSECENCQQVGNIFINGQYVHPEIDTII---RGRANY 179
F +YIS PCGD ++ D++ + +F N + ++ T + G
Sbjct: 911 SFHLYISTAPCGDGALFDKSCSDRAMESTESRHYPVFENPK--QGKLRTKVENGEGTIPV 968
Query: 180 KLRKVVRTKPGRADSKITLSKSCSDKLTMKQMISICNALTWSLLQSPVYLEWIVL 234
+ +V T G + + SCSDK+ ++ + AL LQ P+YL+ + L
Sbjct: 969 ESSDIVPTWDGIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQ-PIYLKSVTL 1022
>Hs7669473 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 1200
Score = 65.5 bits (158), Expect = 1e-10
Identities = 61/235 (25%), Positives = 103/235 (42%), Gaps = 15/235 (6%)
Query: 6 DRIAASVISAYDKLPKSGKPGIRSNGVTEWTVLSGIVAFDELNDRYEPISLGTGVKATPN 65
D+IA ++ L S +P + +L+ I+ + D +SLGTG +
Sbjct: 816 DQIAMLSHRCFNTLTNSFQPSLLGR-----KILAAIIMKKDSEDMGVVVSLGTGNRCVKG 870
Query: 66 EELQRSNGQIVHDCHAEVICLRAFNALLLKEICDLQN-GQKSFLIEKSADGYK--VKDVW 122
+ L G+ V+DCHAE+I R F L E+ + K + E + G K +K
Sbjct: 871 DSLSLK-GETVNDCHAEIISRRGFIRFLYSELMKYNSQTAKDSIFEPAKGGEKLQIKKTV 929
Query: 123 KFAMYISRIPCGDASMNLLEAEDKSECENCQQVGNIFINGQYVHPEIDTII---RGRANY 179
F +YIS PCGD ++ D++ + +F N + ++ T + G
Sbjct: 930 SFHLYISTAPCGDGALFDKSCSDRAMESTESRHYPVFENPK--QGKLRTKVENGEGTIPV 987
Query: 180 KLRKVVRTKPGRADSKITLSKSCSDKLTMKQMISICNALTWSLLQSPVYLEWIVL 234
+ +V T G + + SCSDK+ ++ + AL LQ P+YL+ + L
Sbjct: 988 ESSDIVPTWDGIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQ-PIYLKSVTL 1041
>Hs4501917 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 1226
Score = 65.5 bits (158), Expect = 1e-10
Identities = 61/235 (25%), Positives = 103/235 (42%), Gaps = 15/235 (6%)
Query: 6 DRIAASVISAYDKLPKSGKPGIRSNGVTEWTVLSGIVAFDELNDRYEPISLGTGVKATPN 65
D+IA ++ L S +P + +L+ I+ + D +SLGTG +
Sbjct: 842 DQIAMLSHRCFNTLTNSFQPSLLGR-----KILAAIIMKKDSEDMGVVVSLGTGNRCVKG 896
Query: 66 EELQRSNGQIVHDCHAEVICLRAFNALLLKEICDLQN-GQKSFLIEKSADGYK--VKDVW 122
+ L G+ V+DCHAE+I R F L E+ + K + E + G K +K
Sbjct: 897 DSLSLK-GETVNDCHAEIISRRGFIRFLYSELMKYNSQTAKDSIFEPAKGGEKLQIKKTV 955
Query: 123 KFAMYISRIPCGDASMNLLEAEDKSECENCQQVGNIFINGQYVHPEIDTII---RGRANY 179
F +YIS PCGD ++ D++ + +F N + ++ T + G
Sbjct: 956 SFHLYISTAPCGDGALFDKSCSDRAMESTESRHYPVFENPK--QGKLRTKVENGEGTIPV 1013
Query: 180 KLRKVVRTKPGRADSKITLSKSCSDKLTMKQMISICNALTWSLLQSPVYLEWIVL 234
+ +V T G + + SCSDK+ ++ + AL LQ P+YL+ + L
Sbjct: 1014 ESSDIVPTWDGIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQ-PIYLKSVTL 1067
>Hs8922077 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 739
Score = 64.3 bits (155), Expect = 3e-10
Identities = 56/206 (27%), Positives = 103/206 (49%), Gaps = 18/206 (8%)
Query: 38 LSGIVAFDELNDRY-EPISLGTGVKATPNEELQRSNGQIVHDCHAEVICLRAFNALLLKE 96
L+GIV L+ R + ++L +G K E L G +V+DCHAEV+ RAF L +
Sbjct: 390 LAGIVMTKGLDARQAQVVALSSGTKCISGEHLS-DQGLVVNDCHAEVVARRAFLHFLYTQ 448
Query: 97 ICDL------QNGQKSFLIEKSADGYKVKDVWKFAMYISRIPCGDASMNLLEAEDKSECE 150
+ +L ++ ++S + GY++++ F +Y+S PCGDA ++ E ++
Sbjct: 449 L-ELHLSKRREDSERSIFVRLKEGGYRLRENILFHLYVSTSPCGDARLH-SPYEITTDLH 506
Query: 151 NCQQVGNIFINGQYVHPEIDTIIRGRANYKLR--KVVRTKPGRADSKITLSKSCSDKLTM 208
+ + + F ++ +I++ G +R V+T G + ++ SC+DK+
Sbjct: 507 SSKHLVRKFRG--HLRTKIES---GEGTVPVRGPSAVQTWDGVLLGEQLITMSCTDKIAR 561
Query: 209 KQMISICNALTWSLLQSPVYLEWIVL 234
++ + AL S PVYL+ IV+
Sbjct: 562 WNVLGLQGALL-SHFVEPVYLQSIVV 586
>Hs7669479 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 714
Score = 63.2 bits (152), Expect = 6e-10
Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 52/300 (17%)
Query: 3 VIADRIAASVISAYDKLPKS-GKPGIRSNGVTEWTVLSGIVAFDELNDR-YEPISLGTGV 60
V+AD ++ V+ + L + P R VL+G+V + + + IS+ TG
Sbjct: 322 VLADAVSRLVLGKFGDLTDNFSSPHARRK------VLAGVVMTTGTDVKDAKVISVSTGT 375
Query: 61 KATPNEELQRSNGQIVHDCHAEVICLRAFNALLLKEI---CDLQNGQKSFLIEKSA-DGY 116
K N E G ++DCHAE+I R+ L ++ + ++ QK + +KS G+
Sbjct: 376 KCI-NGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGGF 434
Query: 117 KVKDVWKFAMYISRIPCGDASMNLLEAEDKSECENCQQVGNIFINGQYVHPEIDTII--- 173
++K+ +F +YIS PCGDA + + Q G + N + P ++
Sbjct: 435 RLKENVQFHLYISTSPCGDARIFSPHEPILEGSRSYTQAGVQWCNHGSLQPRPPGLLSDP 494
Query: 174 ----------------------RGRANYKLRKVVRTKPGRADSKI-----------TLSK 200
RG+ K+ T P R+++ I L+
Sbjct: 495 STSTFQGAGTTEPADRHPNRKARGQLRTKIESGEGTIPVRSNASIQTWDGVLQGERLLTM 554
Query: 201 SCSDKLTMKQMISICNALTWSLLQSPVYLEWIVLPKQYQYEQVQLEDTFWLRLKNQQFLP 260
SCSDK+ ++ I +L S+ P+Y I+L Y + L + R+ N + LP
Sbjct: 555 SCSDKIARWNVVGIQGSLL-SIFVEPIYFSSIILGSLYHGD--HLSRAMYQRISNIEDLP 611
>Hs7669477 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 741
Score = 63.2 bits (152), Expect = 6e-10
Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 52/300 (17%)
Query: 3 VIADRIAASVISAYDKLPKS-GKPGIRSNGVTEWTVLSGIVAFDELNDR-YEPISLGTGV 60
V+AD ++ V+ + L + P R VL+G+V + + + IS+ TG
Sbjct: 322 VLADAVSRLVLGKFGDLTDNFSSPHARRK------VLAGVVMTTGTDVKDAKVISVSTGT 375
Query: 61 KATPNEELQRSNGQIVHDCHAEVICLRAFNALLLKEI---CDLQNGQKSFLIEKSA-DGY 116
K N E G ++DCHAE+I R+ L ++ + ++ QK + +KS G+
Sbjct: 376 KCI-NGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGGF 434
Query: 117 KVKDVWKFAMYISRIPCGDASMNLLEAEDKSECENCQQVGNIFINGQYVHPEIDTII--- 173
++K+ +F +YIS PCGDA + + Q G + N + P ++
Sbjct: 435 RLKENVQFHLYISTSPCGDARIFSPHEPILEGSRSYTQAGVQWCNHGSLQPRPPGLLSDP 494
Query: 174 ----------------------RGRANYKLRKVVRTKPGRADSKI-----------TLSK 200
RG+ K+ T P R+++ I L+
Sbjct: 495 STSTFQGAGTTEPADRHPNRKARGQLRTKIESGEGTIPVRSNASIQTWDGVLQGERLLTM 554
Query: 201 SCSDKLTMKQMISICNALTWSLLQSPVYLEWIVLPKQYQYEQVQLEDTFWLRLKNQQFLP 260
SCSDK+ ++ I +L S+ P+Y I+L Y + L + R+ N + LP
Sbjct: 555 SCSDKIARWNVVGIQGSLL-SIFVEPIYFSSIILGSLYHGD--HLSRAMYQRISNIEDLP 611
>7290203 [A] KOG2777 tRNA-specific adenosine deaminase 1
Length = 632
Score = 61.2 bits (147), Expect = 2e-09
Identities = 56/187 (29%), Positives = 89/187 (46%), Gaps = 15/187 (8%)
Query: 54 ISLGTGVKATPNEELQRSNGQIVHDCHAEVICLRAFNALLLKEICDLQNGQKSF---LIE 110
IS+ TG K E + NG +++D HAE++ R L ++ DLQ Q + +
Sbjct: 303 ISVSTGTKCVSGEHMS-VNGAVLNDSHAEIVSRRCLLKYLYAQL-DLQCNQATAYQSIFV 360
Query: 111 KSADG---YKVKDVWKFAMYISRIPCGDASMNLLEAEDKSECENCQQVGNIFINGQYVHP 167
++ DG YK+K F +YI+ PCGDA + D + N GQ +
Sbjct: 361 RNTDGQYPYKLKSGVHFHLYINTAPCGDARIFSPHEND----TGVDKHPNRKARGQ-LRT 415
Query: 168 EIDTIIRGRANYKLRKVVRTKPGRADSKITLSKSCSDKLTMKQMISICNALTWSLLQSPV 227
+I++ G K ++T G + L+ SCSDK+ ++ I +L S+++ PV
Sbjct: 416 KIES-GEGTIPVKSSDGIQTWDGVLQGQRLLTMSCSDKIARWNIVGIQGSLLSSIIE-PV 473
Query: 228 YLEWIVL 234
YL IVL
Sbjct: 474 YLHSIVL 480
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,169,616
Number of Sequences: 60738
Number of extensions: 969785
Number of successful extensions: 2101
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2070
Number of HSP's gapped (non-prelim): 17
length of query: 380
length of database: 30,389,216
effective HSP length: 108
effective length of query: 272
effective length of database: 23,829,512
effective search space: 6481627264
effective search space used: 6481627264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)