ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI0228 good DO KOG3437 Cell cycle control, cell division, chromosome partitioning Anaphase-promoting complex (APC), subunit 10
r_klactI0228 good DO KOG3437 Posttranslational modification, protein turnover, chaperones Anaphase-promoting complex (APC), subunit 10
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI0228 80886 81665 260
(260 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL240w [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10 190 2e-48
SPBC1A4.01 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10 117 2e-26
Hs7657035 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10 97 3e-20
7302773 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10 93 3e-19
ECU05g0980 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10 73 5e-13
CE05640 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10 60 4e-09
At2g18290 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10 53 4e-07
>YGL240w [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10
Length = 283
Score = 190 bits (483), Expect = 2e-48
Identities = 84/163 (51%), Positives = 119/163 (72%)
Query: 65 QEESLESYLKSYTTELELIEQQNLVNLTKLAFWKASSFKVGNPIANAIDDDPTTFWQSDG 124
Q + E+ + +E+++ ++N+T LA WK SSFK+GNP+ A+DD+ TFWQSDG
Sbjct: 91 QNPTPENLQHMFHQGIEILDSARMINVTHLALWKPSSFKLGNPVDFALDDNYDTFWQSDG 150
Query: 125 LQPHRIDINFSKRVDVVQLAMYFCLVTDESYTPELFKVYAGYSPSDASLYRTFEVKNVNG 184
QPH++DI FSKR+D+ +A++F ++ DESY P L KVYAG+SPSDA Y+ EV+NVNG
Sbjct: 151 GQPHQLDIMFSKRMDICVMAIFFSMIADESYAPSLVKVYAGHSPSDARFYKMLEVRNVNG 210
Query: 185 WVVITFKGNRPHDNLLRCRFIQIQILSNHENGKDSHLRGIKIF 227
WV + F NR D LL+C+FI++ NHENGKD+HLRGI+++
Sbjct: 211 WVALRFLDNREDDQLLKCQFIRLLFPVNHENGKDTHLRGIRLY 253
>SPBC1A4.01 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10
Length = 189
Score = 117 bits (293), Expect = 2e-26
Identities = 62/142 (43%), Positives = 84/142 (58%), Gaps = 1/142 (0%)
Query: 86 QNLVNLTKLAFWKASSFKVGNPIANAIDDDPTTFWQSDGLQPHRIDINFSKRVDVVQLAM 145
+ V++ LA W SS K G PI DD+ T+WQSDG QPH I I F KRV + ++M
Sbjct: 21 EGFVDIGNLAQWTCSSEKSGFPIRLVRDDNIDTYWQSDGSQPHTIHIKFVKRVSIKYVSM 80
Query: 146 YFCLVTDESYTPELFKVYAGYSPSDASLYRTFEVKNVNGWVVITFKGNRPHDNLLRCRFI 205
Y DESYTP ++ AG D + T +V+ GWV + G+ + LL I
Sbjct: 81 YLQYTLDESYTPSTLRISAGTGFQDLEIVTTVQVEEPTGWVHVPV-GDFGRNGLLDVHLI 139
Query: 206 QIQILSNHENGKDSHLRGIKIF 227
QI+IL+NH++GKDSH+R IKI+
Sbjct: 140 QIKILANHQSGKDSHVRLIKIY 161
>Hs7657035 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10
Length = 185
Score = 96.7 bits (239), Expect = 3e-20
Identities = 51/133 (38%), Positives = 72/133 (53%), Gaps = 2/133 (1%)
Query: 95 AFWKASSFKVGNPIANAIDDDPTTFWQSDGLQPHRIDINFSKRVDVVQLAMYFCLVTDES 154
A W SS K G + DD+ T+WQSDG QPH ++I F ++ V L +Y +DES
Sbjct: 29 AVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDES 88
Query: 155 YTPELFKVYAGYSPSDASLYRTFEVKNVNGWVVITFKGNRPHDNLLRCRFIQIQILSNHE 214
YTP V G + + R E+ +GW+ + N H R IQI +L+NH
Sbjct: 89 YTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDN--HKKPTRSFMIQIAVLANHL 146
Query: 215 NGKDSHLRGIKIF 227
NG+D+H+R IKI+
Sbjct: 147 NGRDTHMRQIKIY 159
>7302773 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10
Length = 191
Score = 93.2 bits (230), Expect = 3e-19
Identities = 47/132 (35%), Positives = 72/132 (53%), Gaps = 2/132 (1%)
Query: 95 AFWKASSFKVGNPIANAIDDDPTTFWQSDGLQPHRIDINFSKRVDVVQLAMYFCLVTDES 154
A W SS K G + D+ T+WQSDG PH ++I F KR ++ Q+ +Y DES
Sbjct: 33 AVWSLSSCKPGFGVERLRDNIMDTYWQSDGQLPHLVNIQFHKRTNISQIYIYTDYKLDES 92
Query: 155 YTPELFKVYAGYSPSDASLYRTFEVKNVNGWVVITFKGNRPHDNLLRCRFIQIQILSNHE 214
YTP + +G + +D + ++ GWV I K +R +QI ++SNH+
Sbjct: 93 YTPSRISIRSGTNFNDLQELQVMDLTEPTGWVQIPIKDGNVKS--IRTFMLQIAVISNHQ 150
Query: 215 NGKDSHLRGIKI 226
NG+D+H+R I+I
Sbjct: 151 NGRDTHMRQIRI 162
>ECU05g0980 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10
Length = 136
Score = 72.8 bits (177), Expect = 5e-13
Identities = 40/134 (29%), Positives = 67/134 (49%), Gaps = 8/134 (5%)
Query: 98 KASSFKVGNPIANAIDDDPTTFWQSDGLQPHRIDINFSKRVDVVQLAMYFCLVTDESYTP 157
+ SSFK + + + D + +W +D + PH I I+F + V + ++ D+SYTP
Sbjct: 4 RLSSFKREHSLRELLSKDMSEYWATDDVLPHSIQISFDRVRYVQSVQLFLSFTQDDSYTP 63
Query: 158 ELFKVYAGYSPSDASLYRTFEVKNVNGWVVITFKGNRPHDNLLRCRFIQIQILSNHENGK 217
E V G + D + E+ G + ++ +C +I + I SNH+ GK
Sbjct: 64 EKIGVRCGLTREDVREISSVELVEPEGLLTLSV--------ARKCIYILVVINSNHQEGK 115
Query: 218 DSHLRGIKIFGNST 231
DSH+R +KI +ST
Sbjct: 116 DSHVRHLKILESST 129
>CE05640 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10
Length = 198
Score = 59.7 bits (143), Expect = 4e-09
Identities = 42/171 (24%), Positives = 76/171 (43%), Gaps = 21/171 (12%)
Query: 63 EDQEESLESYLKS--YTTELELIEQQNLVNLTKLAFWKASSFKVGNPIANAIDDDPTTFW 120
E++ S +++ Y + L I ++ ++L+ +A + + + W
Sbjct: 3 EEERTSSRGWMREFKYPSNLRDITEEARISLSSVAHFD-----------ELLHESSELAW 51
Query: 121 QSDGLQPHRIDINFSKRVDVVQLAMYFCLVTDESYTPELFKVYAGYSPSDASLYRTFEVK 180
+++ PHR FSK+ D+ + ++ DESY P+ ++ G +D L V
Sbjct: 52 RTNMSPPHRALFTFSKKTDISYVMLFLDYSRDESYCPQEVRIDLGDGTNDWWLKMYRRVD 111
Query: 181 NVNGWVVITFKGNRPHD---NLLRCRFIQIQILSNHENGKDSHLRGIKIFG 228
GWV I HD N LR +Q+ I+ NHE G+D +R ++ G
Sbjct: 112 QPKGWVKIPI-----HDAFGNPLRVMSLQMTIMKNHEKGRDCVVRHFRVLG 157
>At2g18290 [DO] KOG3437 Anaphase-promoting complex (APC) subunit 10
Length = 122
Score = 53.1 bits (126), Expect = 4e-07
Identities = 31/93 (33%), Positives = 44/93 (46%), Gaps = 7/93 (7%)
Query: 112 IDDD-----PTTFWQ--SDGLQPHRIDINFSKRVDVVQLAMYFCLVTDESYTPELFKVYA 164
IDDD W S GLQPH I+I F K+V + + +Y DESYTP + A
Sbjct: 23 IDDDLREMGKNAAWSVSSYGLQPHLINIQFQKKVKLQLVVLYVDFKLDESYTPSKISIRA 82
Query: 165 GYSPSDASLYRTFEVKNVNGWVVITFKGNRPHD 197
G + ++ E+ GWV ++ G P +
Sbjct: 83 GDGFHNLKEIKSVELVKPTGWVCLSLSGTDPRE 115
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.134 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,669,718
Number of Sequences: 60738
Number of extensions: 734773
Number of successful extensions: 2206
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2196
Number of HSP's gapped (non-prelim): 7
length of query: 260
length of database: 30,389,216
effective HSP length: 104
effective length of query: 156
effective length of database: 24,072,464
effective search space: 3755304384
effective search space used: 3755304384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)