ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI0241 normal K KOG1561 Transcription CCAAT-binding factor, subunit B (HAP2)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI0241 85915 85016 -300
(300 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL237c [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 122 8e-28
SPBC725.11c [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 96 6e-20
Hs4505389 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 92 9e-19
Hs11496974 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 92 9e-19
At1g30500 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 91 3e-18
At3g20910 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 88 2e-17
At5g12840 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 86 8e-17
At1g72830 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 84 2e-16
7294940 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 83 6e-16
At2g34720 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 82 7e-16
At1g17590 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 81 2e-15
At1g54160 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 80 3e-15
At3g14020 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 80 4e-15
At5g06510 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 77 4e-14
At3g05690 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 72 7e-13
CE03642 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 64 3e-10
CE25432 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 63 6e-10
ECU03g1510 [K] KOG1561 CCAAT-binding factor subunit B (HAP2) 62 1e-09
>YGL237c [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 265
Score = 122 bits (305), Expect = 8e-28
Identities = 67/130 (51%), Positives = 80/130 (61%), Gaps = 8/130 (6%)
Query: 121 QQRQEESDANGIMEKLTDDNSMKQVSNAKTSLETAQFLETSNSMELQ--------RTKPH 172
QQ Q S + ME D S V+ Q + + Q + +P+
Sbjct: 87 QQSQYTSSSVSTMEPSADFTSFSAVTTLPPPPHQQQQQQQQQQQQQQLVVQAQYTQNQPN 146
Query: 173 DMNIISPSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRR 232
+ + + EQPFYVNAKQYYRILKRRYARAKLEE L+ISRER+PYLHESRHKHAMRR
Sbjct: 147 LQSDVLGTAIAEQPFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRR 206
Query: 233 PRGQGGRFLT 242
PRG+GGRFLT
Sbjct: 207 PRGEGGRFLT 216
>SPBC725.11c [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 334
Score = 95.9 bits (237), Expect = 6e-20
Identities = 48/67 (71%), Positives = 56/67 (82%), Gaps = 2/67 (2%)
Query: 177 ISPSEPLEQPFYVNAKQYYRILKRRYARAKLEENLK-ISRERRPYLHESRHKHAMRRPRG 235
++P EP+E YVNAKQY+RILKRR ARAKLEE L+ + ++PYLHESRHKHAMRRPRG
Sbjct: 1 MNPYEPVEG-LYVNAKQYHRILKRREARAKLEERLRGVQTTKKPYLHESRHKHAMRRPRG 59
Query: 236 QGGRFLT 242
GGRFLT
Sbjct: 60 PGGRFLT 66
>Hs4505389 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 347
Score = 92.0 bits (227), Expect = 9e-19
Identities = 43/59 (72%), Positives = 49/59 (82%)
Query: 184 EQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGGRFLT 242
E+P YVNAKQY+RILKRR ARAKLE KI +ERR YLHESRH+HAM R RG+GGRF +
Sbjct: 262 EEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFS 320
>Hs11496974 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 318
Score = 92.0 bits (227), Expect = 9e-19
Identities = 43/59 (72%), Positives = 49/59 (82%)
Query: 184 EQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGGRFLT 242
E+P YVNAKQY+RILKRR ARAKLE KI +ERR YLHESRH+HAM R RG+GGRF +
Sbjct: 233 EEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFS 291
>At1g30500 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 107
Score = 90.5 bits (223), Expect = 3e-18
Identities = 40/63 (63%), Positives = 52/63 (82%)
Query: 179 PSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGG 238
PS+ +E+P +VNAKQY+ IL+RR +RA+LE K+ + R+PYLHESRH HA+RRPRG GG
Sbjct: 11 PSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGG 70
Query: 239 RFL 241
RFL
Sbjct: 71 RFL 73
>At3g20910 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 298
Score = 87.8 bits (216), Expect = 2e-17
Identities = 40/62 (64%), Positives = 48/62 (76%)
Query: 179 PSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGG 238
P E ++P +VNAKQY IL+RR ARAK E K+ + R+PYLHESRH+HAMRRPRG GG
Sbjct: 155 PPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGG 214
Query: 239 RF 240
RF
Sbjct: 215 RF 216
>At5g12840 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 272
Score = 85.5 bits (210), Expect = 8e-17
Identities = 40/62 (64%), Positives = 47/62 (75%)
Query: 179 PSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGG 238
P + ++P YVNAKQY IL+RR ARAK E K+ R+R+PYLHESRHKHAMRR R GG
Sbjct: 166 PLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGG 225
Query: 239 RF 240
RF
Sbjct: 226 RF 227
>At1g72830 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 340
Score = 84.0 bits (206), Expect = 2e-16
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 179 PSEPLE-QPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQG 237
P+E E P +VNAKQY+ I++RR RAKLE K+ R R+PYLHESRH HA++RPRG G
Sbjct: 172 PAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSG 231
Query: 238 GRFL 241
GRFL
Sbjct: 232 GRFL 235
>7294940 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 399
Score = 82.8 bits (203), Expect = 6e-16
Identities = 51/120 (42%), Positives = 63/120 (52%), Gaps = 19/120 (15%)
Query: 121 QQRQEESDANGIMEKLTDDNSMKQVSNAKTSLETAQFLETSNSMELQRTKPHDMNIISPS 180
QQ+Q++ + +N VS + T T E+S
Sbjct: 242 QQQQQQQTVAAVAASAAVNNISADVSTSTTGTNTNSEDESSKG----------------- 284
Query: 181 EPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGGRF 240
E E+P YVNAKQY RIL RR ARAKLE +I +ER YLHESRH+HAM R RG+GGRF
Sbjct: 285 EADEEPLYVNAKQYKRILIRRQARAKLES--RIPKERCKYLHESRHRHAMNRARGEGGRF 342
>At2g34720 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 226
Score = 82.4 bits (202), Expect = 7e-16
Identities = 40/73 (54%), Positives = 52/73 (70%), Gaps = 5/73 (6%)
Query: 174 MNIISPSEPL-----EQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKH 228
M + P PL E+P +VNAKQY+ IL+RR +RAKLE + + ++PY+HESRH H
Sbjct: 110 MGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLH 169
Query: 229 AMRRPRGQGGRFL 241
A+RRPRG GGRFL
Sbjct: 170 AIRRPRGCGGRFL 182
>At1g17590 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 328
Score = 81.3 bits (199), Expect = 2e-15
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 185 QPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGGRFL 241
+P +VNAKQ++ I++RR RAKLE K+ + R+PYLHESRH HA++RPRG GGRFL
Sbjct: 172 EPVFVNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFL 228
>At1g54160 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 308
Score = 80.5 bits (197), Expect = 3e-15
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 6/74 (8%)
Query: 174 MNIISPSEPL------EQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHK 227
M ++S PL +P +VNAKQY+ IL+RR RAKLE K+ + R+PYLHESRH
Sbjct: 161 MGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHL 220
Query: 228 HAMRRPRGQGGRFL 241
HA++R RG GGRFL
Sbjct: 221 HALKRARGSGGRFL 234
>At3g14020 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 308
Score = 80.1 bits (196), Expect = 4e-15
Identities = 37/60 (61%), Positives = 45/60 (74%)
Query: 182 PLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGGRFL 241
P +P +VNAKQY IL+RR RAKLE K+ + R+PYLHESRH HA++R RG GGRFL
Sbjct: 168 PENEPIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFL 227
>At5g06510 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 269
Score = 76.6 bits (187), Expect = 4e-14
Identities = 36/54 (66%), Positives = 44/54 (80%), Gaps = 3/54 (5%)
Query: 188 YVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGGRFL 241
YVN+KQY+ I++RR +RAK E K+SR R+PY+H SRH HAMRRPRG GGRFL
Sbjct: 137 YVNSKQYHGIIRRRQSRAKAE---KLSRCRKPYMHHSRHLHAMRRPRGSGGRFL 187
>At3g05690 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 295
Score = 72.4 bits (176), Expect = 7e-13
Identities = 35/65 (53%), Positives = 46/65 (69%), Gaps = 4/65 (6%)
Query: 181 EPLEQPFYVNAKQYYRILKRRYARAK----LEENLKISRERRPYLHESRHKHAMRRPRGQ 236
E + YVN+KQY+ I++RR +RAK L++ SR R+PY+H SRH HA+RRPRG
Sbjct: 132 ETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGS 191
Query: 237 GGRFL 241
GGRFL
Sbjct: 192 GGRFL 196
>CE03642 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 482
Score = 63.9 bits (154), Expect = 3e-10
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 173 DMNIISPSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRR 232
++ +I P ++QP VN KQ+ RI++RR R +LE + ++ R+ YLHESRH HA++R
Sbjct: 293 NVEMIGPK--VQQPMLVNPKQFNRIMRRREMRQQLEASGRLPLARQKYLHESRHLHALKR 350
Query: 233 PRGQGGRF 240
RG GRF
Sbjct: 351 KRGLDGRF 358
>CE25432 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 519
Score = 62.8 bits (151), Expect = 6e-10
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 12/123 (9%)
Query: 124 QEESDANGIMEKLTDDNSMKQVSNA--KTSLETAQF----LETSNSMELQRTKPHDMNII 177
QE ++ ++ +++D++ V +A ++ LE+ L N+ + + H N I
Sbjct: 323 QENGESRTVLIPMSNDSTEDDVRSALPQSVLESINQHQNQLRQGNAQAVHYYQKHQ-NPI 381
Query: 178 SPSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQG 237
S E+P VN +QY RI+KRR R K+E++ ++ ER+ Y+HESR +HA++R R G
Sbjct: 382 SH----EKPIMVNPRQYKRIIKRREMRQKMEDSGRLPLERQKYMHESRRQHALKR-RRTG 436
Query: 238 GRF 240
GRF
Sbjct: 437 GRF 439
>ECU03g1510 [K] KOG1561 CCAAT-binding factor subunit B (HAP2)
Length = 123
Score = 62.0 bits (149), Expect = 1e-09
Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 185 QPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGGRFLT 242
QP YVNAKQ I KR+ AR + ++L I+ RR YLHESRHKHAM+R R GRFLT
Sbjct: 54 QPLYVNAKQLNWIKKRK-ARRDMLDSLMITN-RRNYLHESRHKHAMKRLRAPSGRFLT 109
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.307 0.127 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,696,419
Number of Sequences: 60738
Number of extensions: 802042
Number of successful extensions: 2735
Number of sequences better than 1.0e-05: 18
Number of HSP's better than 0.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2712
Number of HSP's gapped (non-prelim): 19
length of query: 300
length of database: 30,389,216
effective HSP length: 106
effective length of query: 194
effective length of database: 23,950,988
effective search space: 4646491672
effective search space used: 4646491672
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)