ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI0281 good S KOG3318 Function unknown Predicted membrane protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI0281 100867 100262 -202
(202 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL231c [S] KOG3318 Predicted membrane protein 141 7e-34
SPCC1281.03c [S] KOG3318 Predicted membrane protein 115 5e-26
7296588 [S] KOG3318 Predicted membrane protein 86 3e-17
Hs7705997 [S] KOG3318 Predicted membrane protein 86 4e-17
CE26347 [S] KOG3318 Predicted membrane protein 80 2e-15
At5g10780 [S] KOG3318 Predicted membrane protein 59 4e-09
>YGL231c [S] KOG3318 Predicted membrane protein
Length = 190
Score = 141 bits (355), Expect = 7e-34
Identities = 80/182 (43%), Positives = 108/182 (58%), Gaps = 10/182 (5%)
Query: 23 MSEDIP-QWAKDLKVDKVMRRNSV-NGGKLPDPFGIKKLEIEGQKPPKVIDHDAQ----- 75
MSE P +WAK L K + + ++ N LP P G + +G K D +Q
Sbjct: 1 MSEQEPYEWAKHLLDTKYIEKYNIQNSNTLPSPPGFEGNSSKGNVTRKQQDATSQTTSLA 60
Query: 76 --NRIAKLTAERAWQISSEPLKSVPMNIIMSYMSGNSLQIIPIMTAVMLVSNPIKSILGV 133
N+I L ++AWQI+ +P KS+PMNI MSYMSG SLQIIPIMTA+ML+S PIK+I
Sbjct: 61 QKNQITVLQVQKAWQIALQPAKSIPMNIFMSYMSGTSLQIIPIMTALMLLSGPIKAIFST 120
Query: 134 KSKFQHLINKDNDVTPPVVAAMIMYVIYQLILMGIGLHKLNSMGLFPTTSSDWLAWQQPT 193
+S F+ ++ + V AM MY+++Q +LM IG KLNSMGL P DWL W++
Sbjct: 121 RSAFKPVLG-NKATQSQVQTAMFMYIVFQGVLMYIGYRKLNSMGLIPNAKGDWLPWERIA 179
Query: 194 EY 195
Y
Sbjct: 180 HY 181
>SPCC1281.03c [S] KOG3318 Predicted membrane protein
Length = 193
Score = 115 bits (287), Expect = 5e-26
Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 11/162 (6%)
Query: 46 NGGKLPDPFGIKKLEIEGQKPPKVIDHDAQNRIAK--------LTAERAWQISSEPLKSV 97
N K P P G ++ + + + + AK L ++AW+++ PLK +
Sbjct: 27 NSDKFPTPRGFQQKSLVSKNIHSGNSASSTSIFAKREEELQKDLLLKKAWELAYSPLKQI 86
Query: 98 PMNIIMSYMSGNSLQIIPIMTAVMLVSNPIKSILGVKSKFQHLINKDNDVTPPVVAAMIM 157
PMN I++YMSGNSLQI IMT +ML+ NP+K+I S F P + A
Sbjct: 87 PMNAILAYMSGNSLQIFSIMTTLMLLVNPLKAITSTGSAFTPFKGTHPGTLWPAMGA--- 143
Query: 158 YVIYQLILMGIGLHKLNSMGLFPTTSSDWLAWQQPTEYLYRT 199
Y+++QL+LMGIG++KL MGL PTT+SDWLAW+ ++ R+
Sbjct: 144 YILFQLLLMGIGVYKLQRMGLLPTTTSDWLAWEVSKVFMDRS 185
>7296588 [S] KOG3318 Predicted membrane protein
Length = 166
Score = 85.9 bits (211), Expect = 3e-17
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 29 QWAKDLKVDKVMRRNSVNGGKLPDPFGIKKLEIEGQKPPKVIDHDAQNRIAKLTAERAWQ 88
+WA D N +P P G P +++ R +L +++W
Sbjct: 11 KWALDF--------NGSKNADIPSPLGYN--------PSALVNQSEVVRDQRLVIKKSWD 54
Query: 89 ISSEPLKSVPMNIIMSYMSGNSLQIIPIMTAVMLVSNPIKSILGVKSKFQHLINKDNDVT 148
++ PLK++PMN+ + YMSGNS+ I PIM M++ PIK+I F +
Sbjct: 55 LALGPLKNIPMNLFIMYMSGNSISIFPIMMVGMMLIRPIKAI------FTTQVTSKMAEG 108
Query: 149 PPVVAAMIMYVIYQLILMGIGLHKLNSMGLFPTTSSDWLAWQQP 192
I+Y + L + + L+K SMGL PT +SDWLA+ QP
Sbjct: 109 AQGTGQRIVYFLGNLANVALALYKCQSMGLLPTHASDWLAFVQP 152
>Hs7705997 [S] KOG3318 Predicted membrane protein
Length = 183
Score = 85.5 bits (210), Expect = 4e-17
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 5/132 (3%)
Query: 63 GQKPPKVIDHDAQNRIAKLTAERAWQISSEPLKSVPMNIIMSYMSGNSLQIIPIMTAVML 122
G +V D Q L +R W I+ PLK +PMN+ + YM+GN++ I P M M+
Sbjct: 46 GYLDKQVPDTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMM 105
Query: 123 VSNPIKSILGVKSKFQHLINKDNDVTPPVVAAMIMYVIYQLILMGIGLHKLNSMGLFPTT 182
PI++++ + + F+ L + +V Y+I L+ + + ++K SMGL PT
Sbjct: 106 AWRPIQALMAISATFKMLESSSQKFLQGLV-----YLIGNLMGLALAVYKCQSMGLLPTH 160
Query: 183 SSDWLAWQQPTE 194
+SDWLA+ +P E
Sbjct: 161 ASDWLAFIEPPE 172
>CE26347 [S] KOG3318 Predicted membrane protein
Length = 174
Score = 79.7 bits (195), Expect = 2e-15
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 81 LTAERAWQISSEPLKSVPMNIIMSYMSGNSLQIIPIMTAVMLVSNPIKSILGVKSKFQHL 140
L +R W + P KS+PMN+ M YM+G + I PIM M+V P+K++ V S F+ L
Sbjct: 52 LARKRVWDTAMGPAKSLPMNMFMMYMAGGGVSIFPIMMVGMMVFRPLKALFAVNSTFKPL 111
Query: 141 INKDNDVTPPVVAAMIMYVIYQLILMGIGLHKLNSMGLFPTTSSDWL 187
++ T + +++ + L +G+ ++K+++MGL P T SDWL
Sbjct: 112 ---ESPATGSMFIHKLIFCLGNLGAIGLAIYKVHTMGLLPNTPSDWL 155
>At5g10780 [S] KOG3318 Predicted membrane protein
Length = 194
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/111 (27%), Positives = 62/111 (54%), Gaps = 4/111 (3%)
Query: 84 ERAWQISSEPLKSVPMNIIMSYMSGNSLQIIPIMTAVMLVSNPIKSILGVKSKFQHLINK 143
++AW+++ P K++ M M +M+GN++ + I + PI ++ V F+ K
Sbjct: 62 QKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPF--K 119
Query: 144 DNDVTPPVVAAMIMYVIYQLILMGIGLHKLNSMGLFPTTSSDWLAWQQPTE 194
DN V ++ ++++ L + +G+ KLN++GL PT +SDW++ P +
Sbjct: 120 DNKV--ELLMPKLVFLALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPPQ 168
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,301,321
Number of Sequences: 60738
Number of extensions: 491616
Number of successful extensions: 1143
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1132
Number of HSP's gapped (non-prelim): 6
length of query: 202
length of database: 30,389,216
effective HSP length: 101
effective length of query: 101
effective length of database: 24,254,678
effective search space: 2449722478
effective search space used: 2449722478
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)