ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactI0493    suspect: LH   M     KOG4701  Cell wall/membrane/envelope biogenesis                         Chitinase

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactI0493  167404 163013 -1464
         (1464 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAPB1E7.04c [M] KOG4701 Chitinase                                     56   4e-07

>SPAPB1E7.04c [M] KOG4701 Chitinase
          Length = 1236

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 92/500 (18%), Positives = 176/500 (34%), Gaps = 84/500 (16%)

Query: 483 VPVTIETTPSTSQLDTIPTTATSSEVNDXXXXXXXXXXXXXXXXLSTNILPSETGTTSES 542
           +P T  +TPS+S + +  T+  SS                     S++I    +G +S S
Sbjct: 518 IPSTSSSTPSSSIISSPMTSVLSSS---------SSIPTSSSSDFSSSITTISSGISSSS 568

Query: 543 LLILVSTVESTPESTIIMDVSTSSPDMVSPTSGEXXXXXXXXXXXXLQDTDVSSSTSTEM 602
           +    S+V S      I+  STSSP   S +                  + +SSS S+  
Sbjct: 569 IPSTFSSVSS------ILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSS 622

Query: 603 VVISSEAPGASSILQESTTFTDITSGSDIQLERXXXXXXXXXXXXXXXXXXXXNVFTVFX 662
            ++SS  P  SS++  S++   I SGS                          ++ +   
Sbjct: 623 TILSSPTPSTSSLMISSSS---IISGS-------------------------SSILSSSI 654

Query: 663 XXXXXXXXXXXXXXXIITQTINSGASASFISETRQPMATSVSATL--DGSIVNSGLTSNN 720
                          +I  +    +S+S +  +  P+A+S S+ +    S+V++   S +
Sbjct: 655 STIPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSASLS 714

Query: 721 NWLPTTLVIEPXXXXXXXXXXXXDLGATSTLPQAINPASDVPLPDGYTVIT--------V 772
           N   ++L +               + ++S +P ++N ++ +      T+++        V
Sbjct: 715 NITHSSLSL-------------TAMSSSSAIPTSVNSSTLITASSSNTLLSSITSSSAIV 761

Query: 773 GFKEPLNYPFLIANPLASAQIFNFLPKVLVRPFQLTTTGAAPVYRRSWNIFKKGINTHLL 832
                 N    + +  AS+Q        L     L+++ +  +   S N +    +   +
Sbjct: 762 SSTTVSNISSNLPSATASSQSQLTNSSTLATSLYLSSSSSRTISTSSTNEYNTSFHAPTV 821

Query: 833 SS--------SLPTYDDVQVKSIVPLVIQNVSYIVSIAEVYFPTESVHTLQELV------ 878
           SS        SL     V   SI  L +++ S + S A   + T+SV +   L       
Sbjct: 822 SSTTSSSSTTSLAANKGVNSNSITSLNLESTSSVTSTA---YTTDSVTSTTALTSQGPSS 878

Query: 879 -LDSSSILYSNPVSYLADLASLINPAIPLTGLTYXXXXXXXXXXXXXXXXXXXXXXXXXX 937
            + SSS+  +  +S    + S + PA+  TG                             
Sbjct: 879 SVVSSSLSSTTSLSTSIPVTSSVAPAVTSTGSETSSVVGSGTDSATSSSWTAETSSSAIT 938

Query: 938 XXXXXAEKDNSSNNAALWGS 957
                +    SS++A+ W S
Sbjct: 939 SSVAASVTPTSSSSASSWSS 958


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.311    0.129    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,323,074
Number of Sequences: 60738
Number of extensions: 2301329
Number of successful extensions: 5814
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5804
Number of HSP's gapped (non-prelim): 6
length of query: 1464
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1345
effective length of database: 23,161,394
effective search space: 31152074930
effective search space used: 31152074930
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)