ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactI0511.1    suspect: Pn  E     KOG0259   Amino acid transport and metabolism                            Tyrosine aminotransferase

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactI0511.1 172560  172772 71   
         (71 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Hs4507369 [E] KOG0259 Tyrosine aminotransferase                        28   3.0  
At2g23420 [H] KOG2511 Nicotinic acid phosphoribosyltransferase         27   5.1  
Hs4502231 [K] KOG3561 Aryl-hydrocarbon receptor nuclear transloc...    26   8.7  
7294355 [S] KOG3683 Uncharacterized conserved protein                  26   8.7  

>Hs4507369 [E] KOG0259 Tyrosine aminotransferase
          Length = 454

 Score = 27.7 bits (60), Expect = 3.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 3  PLKSLVALAISSPTFFGDKPNGP 25
          P K++++L+I  PT FG+ P  P
Sbjct: 69 PNKTMISLSIGDPTVFGNLPTDP 91


>At2g23420 [H] KOG2511 Nicotinic acid phosphoribosyltransferase
          Length = 574

 Score = 26.9 bits (58), Expect = 5.1
 Identities = 17/51 (33%), Positives = 24/51 (46%), Gaps = 1/51 (1%)

Query: 1   MIPLKSLVALAISSPTFFGDKPNGPI-FGAKAAEAPTSPPTALKYKYLTSF 50
           ++   SLVA   +   F   K    + FGA+ A+ P    +A KY YL  F
Sbjct: 150 LVNFASLVATNAARHRFVAGKSKSLLEFGARRAQGPDGAISASKYCYLGGF 200


>Hs4502231 [K] KOG3561 Aryl-hydrocarbon receptor nuclear translocator
          Length = 789

 Score = 26.2 bits (56), Expect = 8.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query: 34  APTSPPTALKYKYLTSFGSNF 54
           APT+ P A  Y  LT+ GSNF
Sbjct: 684 APTASPGAAAYPSLTNRGSNF 704


>7294355 [S] KOG3683 Uncharacterized conserved protein
          Length = 836

 Score = 26.2 bits (56), Expect = 8.7
 Identities = 11/31 (35%), Positives = 15/31 (47%)

Query: 23  NGPIFGAKAAEAPTSPPTALKYKYLTSFGSN 53
           N   F A    APT+PPT   +     +GS+
Sbjct: 347 NAETFAAAPTAAPTAPPTTNHFNPFKQYGSS 377


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.319    0.138    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,515,918
Number of Sequences: 60738
Number of extensions: 159595
Number of successful extensions: 396
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 392
Number of HSP's gapped (non-prelim): 5
length of query: 71
length of database: 30,389,216
effective HSP length: 47
effective length of query: 24
effective length of database: 27,534,530
effective search space: 660828720
effective search space used: 660828720
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)