ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactI0523    suspect: LH   R     KOG2343  General function prediction only                               Glucose-repressible protein and related proteins

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactI0523  175977 173620 -786 
         (786 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YEL053c [R] KOG2343 Glucose-repressible protein and related prot...   494   e-139

>YEL053c [R] KOG2343 Glucose-repressible protein and related proteins
          Length = 733

 Score =  494 bits (1272), Expect = e-139
 Identities = 294/757 (38%), Positives = 429/757 (55%), Gaps = 46/757 (6%)

Query: 26  QFIDITDHLKALAAKLAPETVVKEATFNLFEGTYALEVCNVKLDTSLIELCPEELEFDCN 85
           Q +D+T     L +KL PE +VK+  F+LFEGT++LEV N KLD+SLIEL  EE+EFD N
Sbjct: 18  QLVDVTSLFDELCSKLKPEAIVKDPRFDLFEGTHSLEVNNSKLDSSLIELTAEEIEFDVN 77

Query: 86  VPYGDSNNGERLDYVTAVCDRLCRSLMNWLHDYQTLPTTVLSCRYVEFLMELYTSNPVSS 145
           V Y        L  V A+ DRL R +++WL+DYQTLPTTVLSCRY E L+    S+ V  
Sbjct: 78  VAYDPP-----LASVAAIADRLLRCVISWLNDYQTLPTTVLSCRYTESLL----SSLVKG 128

Query: 146 LQSFQGLRTRDPLYDQVLCSFVIGVCSFIKFTSKVLKDGGVYEEEDLNCNVMSLDMLSGV 205
             +     T + LYD+VL S ++GVC   KF  K+L  G V+EEEDLN N M  +    +
Sbjct: 129 TTAGSSWCTGNILYDKVLGSCILGVCYLTKFVQKLLSAGIVFEEEDLNFNNMGFNTFDNL 188

Query: 206 DTKEVIDXXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXPNYHYPSCQSSVSSDLLPLQK 265
             ++V+                 +                  H     +  S+    L +
Sbjct: 189 PGQDVVINSLTESLQILEAYSDDSLHLTMLKHILKIIICL-VHLEDHLTDYSTKTSHLDE 247

Query: 266 SLDIISSLVQDDYTTKQHSYPPGCFSKGIQKRRDNNFPPKDLFEPKGDEYVSYTEFMRDI 325
            ++  +S V   +   Q S P G FS  IQK R N FPP+ + +   D Y  +     D+
Sbjct: 248 LIENANS-VNGIFPQLQLSPPKGAFSTYIQKHRSNQFPPRKITKLPTD-YSGFITLANDV 305

Query: 326 IAALSVKDCNTAFEIRQYVWFFNRIRQRTVMARALLQSYLIRED-TILDKFRFNTFKDMH 384
              L V    +A E  Q+  FFN++ QR V+AR L   + IR+D T+L KF +  F  +H
Sbjct: 306 KTILLVDKAESALETYQFAKFFNKLEQRHVIARILFPLFFIRDDRTVLGKFSYTQFYLLH 365

Query: 385 LYEFSLAGTALYDVISSREQTTDRDNMIEALNELSYCLLRWYQNMPQNSCRHRQGFNRLL 444
           + EFS    + ++     E   +  NM          LL WYQN  QN+CR+RQGFNR L
Sbjct: 366 VKEFSAQTPSEFESSIGNELIQESSNM----------LLEWYQNCSQNTCRYRQGFNRQL 415

Query: 445 LDWDSVQAQFEQYETQWQSMGIVDSITNMGNIPLMPVSTWIYTTKLLMMIEFTLEGFHLE 504
           + WDS+QAQFE   +Q                      +W Y  KL  MIEF+L+GF L+
Sbjct: 416 ILWDSLQAQFESVNSQ-------------------VYCSWTYFMKLSSMIEFSLKGFDLD 456

Query: 505 VYKPWESFTQYWFCYYLSSHLESNLKRLHEFLLQKISYILNYNKRIKKLKAGEKKENAKA 564
           +YKP+E+++ +W+ YYLS HLE+ LK     +   I+ I + NK++KKLKAGEKK+  + 
Sbjct: 457 IYKPFEAYSMFWYVYYLSHHLETFLKDSQNDIESNINAIHSMNKKLKKLKAGEKKDQLRL 516

Query: 565 RYRHLTDNVLPQLRLNERTVNFFFMKCTIFKSLSLAQVFQFALLKSFNVIDSKNDVSTRF 624
           +YR   DN + QL+  ++ +N+   +  I KSL L +VFQFA+LKSF +ID+KN   ++F
Sbjct: 517 KYRFAMDNEMEQLQATKQFLNYLLKEINITKSLCLIEVFQFAILKSFGLIDNKNSTPSKF 576

Query: 625 SSDRLIHKLRFKTFSSIGIPEIPTFEQFQKSLNDFVIEP--PSIHSKIPKLLNFMNTELE 682
           S++RLIH LRFK F+SIG+PE+P +E FQ++L DFVIE    +   K+ +  NF+ TE+ 
Sbjct: 577 SNERLIHNLRFKPFNSIGVPELPEYEVFQQTLKDFVIEEKGAAFDIKLERATNFIETEVR 636

Query: 683 SAKSALSTIIQTIETGETDDSPVSTGTKHVKEPALQWYKSMLNSTVALSVNASVLKTKLS 742
           +  S++  I+Q I+ G+ ++  + TGT+ V+E +L++Y  + +++ ALSVN+ V+   L 
Sbjct: 637 NVVSSIDEIMQGIKGGD-NNGVLVTGTRLVQELSLEYYCKLKHTSKALSVNSKVIVNTLK 695

Query: 743 EDLKSHDLHATYDVELKFTPNGCYYFPLLTISPKKAR 779
           +++K+ D H  Y VEL  T  G  YFP+ T+  K+ R
Sbjct: 696 KNIKNKDSH-EYKVELVHTTEGWNYFPIQTLRIKQDR 731


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.320    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,377,860
Number of Sequences: 60738
Number of extensions: 1915067
Number of successful extensions: 4791
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4780
Number of HSP's gapped (non-prelim): 2
length of query: 786
length of database: 30,389,216
effective HSP length: 114
effective length of query: 672
effective length of database: 23,465,084
effective search space: 15768536448
effective search space used: 15768536448
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)