ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI0550 good J KOG0438 Translation, ribosomal structure and biogenesis Mitochondrial/chloroplast ribosomal protein L2
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI0550 184825 183623 -401
(401 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YEL050c [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2 514 e-145
SPCC16C4.15 [J] KOG0438 Mitochondrial/chloroplast ribosomal prot... 293 3e-79
AtCh087 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2 133 4e-31
AtCh063 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2 133 4e-31
HsM7705714 [J] KOG0438 Mitochondrial/chloroplast ribosomal prote... 105 9e-23
Hs21265070 [J] KOG0438 Mitochondrial/chloroplast ribosomal prote... 105 2e-22
YIL018w [J] KOG2309 60s ribosomal protein L2/L8 82 1e-15
YFR031c-a [J] KOG2309 60s ribosomal protein L2/L8 82 1e-15
Hs4506663 [J] KOG2309 60s ribosomal protein L2/L8 77 5e-14
CE18478 [J] KOG2309 60s ribosomal protein L2/L8 77 6e-14
7292250 [J] KOG2309 60s ribosomal protein L2/L8 74 5e-13
At3g51190 [J] KOG2309 60s ribosomal protein L2/L8 67 4e-11
SPBC839.04 [J] KOG2309 60s ribosomal protein L2/L8 67 5e-11
SPBC2F12.07c [J] KOG2309 60s ribosomal protein L2/L8 67 5e-11
At4g36130 [J] KOG2309 60s ribosomal protein L2/L8 66 1e-10
At2g18020 [J] KOG2309 60s ribosomal protein L2/L8 64 3e-10
7294756 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2 64 5e-10
ECU01g0310 [J] KOG2309 60s ribosomal protein L2/L8 56 1e-07
AtMi044 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2 50 6e-06
At2g07715 [J] KOG0438 Mitochondrial/chloroplast ribosomal protei... 50 6e-06
>YEL050c [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 393
Score = 514 bits (1323), Expect = e-145
Identities = 243/349 (69%), Positives = 288/349 (81%), Gaps = 4/349 (1%)
Query: 53 EEQSSVDDVNVH----MLKIVPNNTDVVALEKQDEXXXXXXXXAKEVTQMKKLKPVSPGL 108
+E +S DD +++ +LKI+PN+TD+V LEKQDE +KEVTQMK+LKPVSPGL
Sbjct: 44 QENTSKDDSSLNITPRLLKIIPNDTDIVTLEKQDELIKRRRKLSKEVTQMKRLKPVSPGL 103
Query: 109 RWYRAPIYPYLHKGRPVKSLTLAKRGNGGRNHSGKITVXXXXXXXXXXXXTVDFSRFESG 168
RWYR+PIYPYL+KGRPV++LT+ ++ +GGRN+SGKITV +DF+R+E G
Sbjct: 104 RWYRSPIYPYLYKGRPVRALTVVRKKHGGRNNSGKITVRHQGGGHRNRTRLIDFNRWEGG 163
Query: 169 MQTVERIEYDPGRSAHIALIKHNDTGALSYILACDGLRAGDTIESYRKGIPPSFLKEMGG 228
QTV+RIEYDPGRS+HIAL+KHN TG LSYI+ACDGLR GD +ES+R+GIP + L EMGG
Sbjct: 164 AQTVQRIEYDPGRSSHIALLKHNTTGELSYIIACDGLRPGDVVESFRRGIPQTLLNEMGG 223
Query: 229 KIDPAILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEKN 288
K+DPAILSV+T QRGNCLPISMIPIG+I+HN+GITP GPGKFCR+AG+YAR+L+K+PEK
Sbjct: 224 KVDPAILSVKTTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKK 283
Query: 289 KAVVRLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAGRSRWLGIRPTVRGVAMNKCDH 348
KA+VRLQSGEHRYVSLEA AT+GVVSNIDHQNRSLGKAGRSRWLGIRPTVRGVAMNKCDH
Sbjct: 284 KAIVRLQSGEHRYVSLEAVATIGVVSNIDHQNRSLGKAGRSRWLGIRPTVRGVAMNKCDH 343
Query: 349 PHXXXXXXXXXXXXXXXPWGQLAKGYKTRRGKHQNKMKVKDRPRGKAGR 397
PH PWGQLAKGYKTRRGK+QN+MKVKDRPRGK R
Sbjct: 344 PHGGGRGKSKSNKLSMSPWGQLAKGYKTRRGKNQNRMKVKDRPRGKDAR 392
>SPCC16C4.15 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 318
Score = 293 bits (750), Expect = 3e-79
Identities = 156/311 (50%), Positives = 198/311 (63%), Gaps = 12/311 (3%)
Query: 97 QMKKLKPVSPGLRWYRAPIYPYLHKGRPVKSLTLAKRGNGGRNHSGKITVXXXXXXXXXX 156
++K KP+SPGLR + P+ YL KG+P + LT+AKR GGRN +G+ITV
Sbjct: 10 EIKTYKPISPGLRHLKRPVSDYLWKGKPFRPLTVAKRKKGGRNETGRITVRHQGGGHKQR 69
Query: 157 XXTVDFSRFESGMQTVERIEYDPGRSAHIALIK--HNDTGALSYILACDGLRAGDTIESY 214
VDF R G+ V RIEYDPGRS HIAL++ +++T SYILACDGLR GDT+ES+
Sbjct: 70 IRLVDFERKVPGVHRVIRIEYDPGRSGHIALVEKLNSETANKSYILACDGLREGDTVESF 129
Query: 215 RK-------GIPPSFLKEMGGKIDPAILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGP 267
R G P + +I+ + + + GNC P+ +IPIG+++H IG+ P
Sbjct: 130 RSLLKTGSNGEPVEMDPVLAAEIEDGTFAAKNLKPGNCFPLRLIPIGTVIHAIGVNPNQK 189
Query: 268 GKFCRAAGSYARILSKIPEKNKAVVRLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAG 327
K CR+AGS ARI++ + A+VRLQSGE R + + AT+GVVSNI Q+R LGKAG
Sbjct: 190 AKLCRSAGSSARIIAF--DGKYAIVRLQSGEERKILDTSFATIGVVSNIYWQHRQLGKAG 247
Query: 328 RSRWLGIRPTVRGVAMNKCDHPHXXXXXXXXXXXXXXXPWGQLAK-GYKTRRGKHQNKMK 386
RSRWLGIRPTVRG AMN CDHPH PWG LAK GYKTRRGK+ NK+
Sbjct: 248 RSRWLGIRPTVRGTAMNPCDHPHGGGGGKSIGNKPSQSPWGVLAKGGYKTRRGKNVNKLL 307
Query: 387 VKDRPRGKAGR 397
V+DRPRGK R
Sbjct: 308 VRDRPRGKEKR 318
>AtCh087 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 274
Score = 133 bits (335), Expect = 4e-31
Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 27/273 (9%)
Query: 121 KGRPVKSLTLAKRGNG-GRNHSGKITVXXXXXXXXXXXXTVDFSRFESGMQ-TVERIEYD 178
K P +L + G GRN G IT +DF R + + IEYD
Sbjct: 23 KSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYD 82
Query: 179 PGRSAHIALIKHNDTGALSYILACDGLRAGDTIESYRKGIPPSFLKEMGGKIDPAILSVR 238
P R+A+I LI + D G YIL G GDTI S + +P
Sbjct: 83 PNRNAYICLIHYGD-GEKRYILHPRGAIIGDTIVSGTE-VP------------------- 121
Query: 239 TAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEKNKAVVRLQSGE 298
+ GN LP++ +P+G+ +HNI IT G+ RAAG+ A++++K E A ++L SGE
Sbjct: 122 -IKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAK--EGKSATLKLPSGE 178
Query: 299 HRYVSLEAAATMGVVSNIDHQNRSLGKAGRSRWLGIRPTVRGVAMNKCDHPHXXXXXXX- 357
R +S +AT+G V N+ +SLG+AG WLG RP VRGV MN DHPH
Sbjct: 179 VRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAP 238
Query: 358 XXXXXXXXPWGQLAKGYKTRRGKHQNKMKVKDR 390
PWG A G +TR+ K ++ + R
Sbjct: 239 IGRKKPVTPWGYPALGRRTRKRKKYSETLILRR 271
>AtCh063 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 274
Score = 133 bits (335), Expect = 4e-31
Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 27/273 (9%)
Query: 121 KGRPVKSLTLAKRGNG-GRNHSGKITVXXXXXXXXXXXXTVDFSRFESGMQ-TVERIEYD 178
K P +L + G GRN G IT +DF R + + IEYD
Sbjct: 23 KSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYD 82
Query: 179 PGRSAHIALIKHNDTGALSYILACDGLRAGDTIESYRKGIPPSFLKEMGGKIDPAILSVR 238
P R+A+I LI + D G YIL G GDTI S + +P
Sbjct: 83 PNRNAYICLIHYGD-GEKRYILHPRGAIIGDTIVSGTE-VP------------------- 121
Query: 239 TAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEKNKAVVRLQSGE 298
+ GN LP++ +P+G+ +HNI IT G+ RAAG+ A++++K E A ++L SGE
Sbjct: 122 -IKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAK--EGKSATLKLPSGE 178
Query: 299 HRYVSLEAAATMGVVSNIDHQNRSLGKAGRSRWLGIRPTVRGVAMNKCDHPHXXXXXXX- 357
R +S +AT+G V N+ +SLG+AG WLG RP VRGV MN DHPH
Sbjct: 179 VRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAP 238
Query: 358 XXXXXXXXPWGQLAKGYKTRRGKHQNKMKVKDR 390
PWG A G +TR+ K ++ + R
Sbjct: 239 IGRKKPVTPWGYPALGRRTRKRKKYSETLILRR 271
>HsM7705714 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 353
Score = 105 bits (263), Expect = 9e-23
Identities = 77/238 (32%), Positives = 121/238 (50%), Gaps = 33/238 (13%)
Query: 121 KGRPVKSLTLAK-RGNGGRNHSGKITVXXXXXXXXXXXXTVDFSRF-----ESGM--QTV 172
K R ++T K R +GGR+H+G+I V +DF RF +SG + V
Sbjct: 67 KSRTKYTITPVKMRKSGGRDHTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKV 126
Query: 173 ERIEYDPGRSAHIALIKHNDTGALSYILACDGLRAGDTIESYRKGIPPSFLKEMGGKIDP 232
++ YDP RSA IAL+ +I+A + ++AGDTI + G++
Sbjct: 127 IQVRYDPCRSADIALVAGGSRKR--WIIATENMQAGDTILN----------SNHIGRMAV 174
Query: 233 AILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEKNKAVV 292
A A+ G+ P+ +P+G++++N+ P ++ RAAG+ +L K+ +++
Sbjct: 175 A------AREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKV--NGHSII 226
Query: 293 RLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAGRSRWLGIRP-----TVRGVAMNK 345
+L S V AT+G VSN+DH R +GKAGR+RWLG RP T RG + K
Sbjct: 227 QLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGGGTARGAGLPK 284
>Hs21265070 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 305
Score = 105 bits (261), Expect = 2e-22
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 28/224 (12%)
Query: 121 KGRPVKSLTLAK-RGNGGRNHSGKITVXXXXXXXXXXXXTVDFSRF-----ESGM--QTV 172
K R ++T K R +GGR+H+G+I V +DF RF +SG + V
Sbjct: 67 KSRTKYTITPVKMRKSGGRDHTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKV 126
Query: 173 ERIEYDPGRSAHIALIKHNDTGALSYILACDGLRAGDTIESYRKGIPPSFLKEMGGKIDP 232
++ YDP RSA IAL+ +I+A + ++AGDTI + G++
Sbjct: 127 IQVRYDPCRSADIALVAGGSRKR--WIIATENMQAGDTILN----------SNHIGRMAV 174
Query: 233 AILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEKNKAVV 292
A A+ G+ P+ +P+G++++N+ P ++ RAAG+ +L K+ A++
Sbjct: 175 A------AREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKV--NGTAII 226
Query: 293 RLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAGRSRWLGIRP 336
+L S V AT+G VSN+DH R +GKAGR+RWLG RP
Sbjct: 227 QLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRP 270
>YIL018w [J] KOG2309 60s ribosomal protein L2/L8
Length = 254
Score = 82.4 bits (202), Expect = 1e-15
Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 172 VERIEYDPGRSAHIALIKHNDTGAL----SYILACDGLRAGDTIESYRKGIPPSFLKEMG 227
V++I +D GR A +A + D +A +G+ G I + +K
Sbjct: 45 VKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEGVHTGQFIYAGKK----------- 93
Query: 228 GKIDPAILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEK 287
A L+V GN LP+ +P G+IV N+ P G RA+G+Y I+ P++
Sbjct: 94 -----ASLNV-----GNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDE 143
Query: 288 NKAVVRLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAG---------RSRWLGIRPTV 338
NK VRL SG + +S +A +GV++ ++ L KAG R+ W P
Sbjct: 144 NKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSW----PKT 199
Query: 339 RGVAMNKCDHPH 350
RGVAMN DHPH
Sbjct: 200 RGVAMNPVDHPH 211
>YFR031c-a [J] KOG2309 60s ribosomal protein L2/L8
Length = 254
Score = 82.4 bits (202), Expect = 1e-15
Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 172 VERIEYDPGRSAHIALIKHNDTGAL----SYILACDGLRAGDTIESYRKGIPPSFLKEMG 227
V++I +D GR A +A + D +A +G+ G I + +K
Sbjct: 45 VKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEGVHTGQFIYAGKK----------- 93
Query: 228 GKIDPAILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEK 287
A L+V GN LP+ +P G+IV N+ P G RA+G+Y I+ P++
Sbjct: 94 -----ASLNV-----GNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDE 143
Query: 288 NKAVVRLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAG---------RSRWLGIRPTV 338
NK VRL SG + +S +A +GV++ ++ L KAG R+ W P
Sbjct: 144 NKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSW----PKT 199
Query: 339 RGVAMNKCDHPH 350
RGVAMN DHPH
Sbjct: 200 RGVAMNPVDHPH 211
>Hs4506663 [J] KOG2309 60s ribosomal protein L2/L8
Length = 257
Score = 77.0 bits (188), Expect = 5e-14
Identities = 59/187 (31%), Positives = 90/187 (47%), Gaps = 30/187 (16%)
Query: 172 VERIEYDPGRSAHIALIKHNDTGALS----YILACDGLRAGDTIESYRKGIPPSFLKEMG 227
V+ I +DPGR A +A + D +A +G+ G + +K
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKK----------- 93
Query: 228 GKIDPAILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEK 287
A L++ GN LP+ +P G+IV + P GK RA+G+YA ++S PE
Sbjct: 94 -----AQLNI-----GNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPET 143
Query: 288 NKAVVRLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAGRS--RWLGIR---PTVRGVA 342
K V+L SG + +S A +GVV+ ++ + KAGR+ ++ R P VRGVA
Sbjct: 144 KKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVA 203
Query: 343 MNKCDHP 349
MN +HP
Sbjct: 204 MNPVEHP 210
>CE18478 [J] KOG2309 60s ribosomal protein L2/L8
Length = 260
Score = 76.6 bits (187), Expect = 6e-14
Identities = 56/188 (29%), Positives = 87/188 (45%), Gaps = 30/188 (15%)
Query: 172 VERIEYDPGRSAHIALIKHNDT----GALSYILACDGLRAGDTIESYRKGIPPSFLKEMG 227
V+ I +DPGR A +A+I D + ++A +G+ G I K
Sbjct: 45 VKDIIHDPGRGAPLAIIAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKA---------- 94
Query: 228 GKIDPAILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEK 287
Q GN +P+ +P G+ + N+ G RA+G+YA +++ P+
Sbjct: 95 -----------QIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPDT 143
Query: 288 NKAVVRLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAGRS--RWLGIR---PTVRGVA 342
K +RL SG + V A +G+V+ ++ L KAGRS ++ R P VRGVA
Sbjct: 144 KKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVA 203
Query: 343 MNKCDHPH 350
MN +HPH
Sbjct: 204 MNPVEHPH 211
>7292250 [J] KOG2309 60s ribosomal protein L2/L8
Length = 256
Score = 73.6 bits (179), Expect = 5e-13
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 38/192 (19%)
Query: 172 VERIEYDPGRSAHIALIKHNDTGALSY----ILACDGLRAGDTIESYRKGIPPSFLKEMG 227
V+ I +DPGR A +A++ D +A +G+ G + RK
Sbjct: 45 VKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKA---------- 94
Query: 228 GKIDPAILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEK 287
T Q GN +P+S +P G+I+ N+ G+ R +G+YA +++ +
Sbjct: 95 -----------TLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDT 143
Query: 288 NKAVVRLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAG---------RSRWLGIRPTV 338
K V+L SG + V A +G+V+ ++ + KAG R+ W P V
Sbjct: 144 KKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSW----PKV 199
Query: 339 RGVAMNKCDHPH 350
RGVAMN +HPH
Sbjct: 200 RGVAMNPVEHPH 211
>At3g51190 [J] KOG2309 60s ribosomal protein L2/L8
Length = 260
Score = 67.4 bits (163), Expect = 4e-11
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 243 GNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEKNKAVVRLQSGEHRYV 302
GN LP+ IP G+++ N+ + G RA+G YA +++ PE N V+L SG + +
Sbjct: 100 GNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKIL 159
Query: 303 SLEAAATMGVVSNIDHQNRSLGKAG---------RSRWLGIRPTVRGVAMNKCDHPH 350
A +G V+ + KAG R+ W P VRGVAMN +HPH
Sbjct: 160 PSACRAMIGQVAGGGRTEKPFLKAGNAYHKYKAKRNCW----PVVRGVAMNPVEHPH 212
>SPBC839.04 [J] KOG2309 60s ribosomal protein L2/L8
Length = 253
Score = 67.0 bits (162), Expect = 5e-11
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 159 TVDFSRFESGMQ-TVERIEYDPGRSAHIALIK-----HNDTGALSYILACDGLRAGDTIE 212
T+DF+ ++ V++I +DPGR A +A + H T +++ A +G+ G +
Sbjct: 30 TLDFAERHGYIRGVVQKIIHDPGRGAPLAKVAFRNPYHYRTDVETFV-ATEGMYTGQFVY 88
Query: 213 SYRKGIPPSFLKEMGGKIDPAILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCR 272
+ A L+V GN LP+ +P G+I+ N+ G R
Sbjct: 89 CGKN----------------AALTV-----GNVLPVGEMPEGTIISNVEEKAGDRGALGR 127
Query: 273 AAGSYARILSKIPEKNKAVVRLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAGRS--R 330
++G+Y I+ + K V+L SG + V A +G+V+ ++ L KAGR+ +
Sbjct: 128 SSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLLKAGRAFHK 187
Query: 331 WLGIR---PTVRGVAMNKCDHPH 350
+ R P RGVAMN DHPH
Sbjct: 188 YRVKRNCWPRTRGVAMNPVDHPH 210
>SPBC2F12.07c [J] KOG2309 60s ribosomal protein L2/L8
Length = 253
Score = 67.0 bits (162), Expect = 5e-11
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 159 TVDFSRFESGMQ-TVERIEYDPGRSAHIALIK-----HNDTGALSYILACDGLRAGDTIE 212
T+DF+ ++ V++I +DPGR A +A + H T +++ A +G+ G +
Sbjct: 30 TLDFAERHGYIRGVVQKIIHDPGRGAPLAKVAFRNPYHYRTDVETFV-ATEGMYTGQFVY 88
Query: 213 SYRKGIPPSFLKEMGGKIDPAILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCR 272
+ A L+V GN LP+ +P G+I+ N+ G R
Sbjct: 89 CGKN----------------AALTV-----GNVLPVGEMPEGTIISNVEEKAGDRGALGR 127
Query: 273 AAGSYARILSKIPEKNKAVVRLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAGRS--R 330
++G+Y I+ + K V+L SG + V A +G+V+ ++ L KAGR+ +
Sbjct: 128 SSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLLKAGRAFHK 187
Query: 331 WLGIR---PTVRGVAMNKCDHPH 350
+ R P RGVAMN DHPH
Sbjct: 188 YRVKRNCWPRTRGVAMNPVDHPH 210
>At4g36130 [J] KOG2309 60s ribosomal protein L2/L8
Length = 258
Score = 65.9 bits (159), Expect = 1e-10
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 38/192 (19%)
Query: 172 VERIEYDPGRSAHIALIKHNDTGALS----YILACDGLRAGDTIESYRKGIPPSFLKEMG 227
V I +DPGR A +A + +A +G+ G + +K
Sbjct: 45 VTEIIHDPGRGAPLARVAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKA---------- 94
Query: 228 GKIDPAILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEK 287
T GN LP+ IP G+++ N+ G F RA+G YA +++ P+
Sbjct: 95 -----------TLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDN 143
Query: 288 NKAVVRLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAG---------RSRWLGIRPTV 338
+ + ++L SG + V A +G V+ + + KAG R+ W P V
Sbjct: 144 DTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCW----PKV 199
Query: 339 RGVAMNKCDHPH 350
RGVAMN +HPH
Sbjct: 200 RGVAMNPVEHPH 211
>At2g18020 [J] KOG2309 60s ribosomal protein L2/L8
Length = 258
Score = 64.3 bits (155), Expect = 3e-10
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 38/192 (19%)
Query: 172 VERIEYDPGRSAHIALIKHNDTGALS----YILACDGLRAGDTIESYRKGIPPSFLKEMG 227
V I +DPGR A +A + +A +G+ G + +K
Sbjct: 45 VTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKA---------- 94
Query: 228 GKIDPAILSVRTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEK 287
T GN LP+ IP G++V N+ G RA+G YA +++ P+
Sbjct: 95 -----------TLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVIAHNPDS 143
Query: 288 NKAVVRLQSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAG---------RSRWLGIRPTV 338
+ ++L SG + V A +G V+ + + KAG R+ W P V
Sbjct: 144 DTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSW----PKV 199
Query: 339 RGVAMNKCDHPH 350
RGVAMN +HPH
Sbjct: 200 RGVAMNPVEHPH 211
>7294756 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 294
Score = 63.5 bits (153), Expect = 5e-10
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 26/162 (16%)
Query: 178 DPGRSAHIALIKHNDTGALSYILACDGLRAGDTIESYRKGIPPSFLKEMGGKIDPAILSV 237
D R+A +AL+ D L YILA + ++AGD +++ R F+ + V
Sbjct: 114 DGCRTAKVALVAVGDE--LKYILATENMKAGDILKTSR------FIPR---------IPV 156
Query: 238 RTAQRGNCLPISMIPIGSIVHNIGITPTGPGKFCR---AAGSYARILSKIPEKNKAVVRL 294
R + G+ P+ +P+G+ +H + PG+ C AAG++ IL K EK VV+L
Sbjct: 157 RPNE-GDAYPLGALPVGTRIHCL---EKNPGQMCHLIHAAGTFGTILRKFDEK--VVVQL 210
Query: 295 QSGEHRYVSLEAAATMGVVSNIDHQNRSLGKAGRSRWLGIRP 336
S AT+G +SN +H +G A R R +G RP
Sbjct: 211 PSKREFAFQRTCMATVGRLSNPEHNKEHVGSAQRMREMGNRP 252
>ECU01g0310 [J] KOG2309 60s ribosomal protein L2/L8
Length = 239
Score = 55.8 bits (133), Expect = 1e-07
Identities = 35/113 (30%), Positives = 56/113 (48%), Gaps = 5/113 (4%)
Query: 243 GNCLPISMIPIGSIVHNIGITPTGPGKFCRAAGSYARILSKIPEKNKAVVRLQSGEHRYV 302
GN I +P G V+++ G F GSY+ +++ E N+ V+++ SG+ V
Sbjct: 85 GNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTV 144
Query: 303 SLEAAATMGVVSNIDHQNRSLGKAGRSRWLG-----IRPTVRGVAMNKCDHPH 350
S E +GVV+ ++ L KA + + + P VRGVAMN +H H
Sbjct: 145 SSECRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIH 197
>AtMi044 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 349
Score = 50.1 bits (118), Expect = 6e-06
Identities = 26/69 (37%), Positives = 36/69 (51%)
Query: 121 KGRPVKSLTLAKRGNGGRNHSGKITVXXXXXXXXXXXXTVDFSRFESGMQTVERIEYDPG 180
+ R ++ TL+ + GRN SG+ITV +D R S M VE IEYDP
Sbjct: 5 RARALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPN 64
Query: 181 RSAHIALIK 189
RS+ IA ++
Sbjct: 65 RSSQIAPVR 73
>At2g07715 [J] KOG0438 Mitochondrial/chloroplast ribosomal protein L2
Length = 307
Score = 50.1 bits (118), Expect = 6e-06
Identities = 26/69 (37%), Positives = 36/69 (51%)
Query: 121 KGRPVKSLTLAKRGNGGRNHSGKITVXXXXXXXXXXXXTVDFSRFESGMQTVERIEYDPG 180
+ R ++ TL+ + GRN SG+ITV +D R S M VE IEYDP
Sbjct: 5 RARALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPN 64
Query: 181 RSAHIALIK 189
RS+ IA ++
Sbjct: 65 RSSQIAPVR 73
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,911,559
Number of Sequences: 60738
Number of extensions: 843806
Number of successful extensions: 1676
Number of sequences better than 1.0e-05: 20
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1626
Number of HSP's gapped (non-prelim): 20
length of query: 401
length of database: 30,389,216
effective HSP length: 109
effective length of query: 292
effective length of database: 23,768,774
effective search space: 6940482008
effective search space used: 6940482008
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)