ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI0653 good E KOG3923 Amino acid transport and metabolism D-aspartate oxidase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI0653 217687 216569 -373
(373 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
SPCC1450.07c [E] KOG3923 D-aspartate oxidase 219 4e-57
Hs4503289 [E] KOG3923 D-aspartate oxidase 87 4e-17
CE07083 [E] KOG3923 D-aspartate oxidase 80 5e-15
Hs5231298 [E] KOG3923 D-aspartate oxidase 75 2e-13
CE15718 [E] KOG3923 D-aspartate oxidase 75 2e-13
HsM4503255 [E] KOG3923 D-aspartate oxidase 72 2e-12
CE26739 [E] KOG3923 D-aspartate oxidase 71 3e-12
Hs21536470 [E] KOG3923 D-aspartate oxidase 70 7e-12
CE09514 [E] KOG3923 D-aspartate oxidase 60 4e-09
7303710 [E] KOG3923 D-aspartate oxidase 59 1e-08
7297177 [E] KOG3923 D-aspartate oxidase 57 3e-08
>SPCC1450.07c [E] KOG3923 D-aspartate oxidase
Length = 348
Score = 219 bits (559), Expect = 4e-57
Identities = 139/371 (37%), Positives = 208/371 (55%), Gaps = 31/371 (8%)
Query: 1 MSNKSQPL-ITVVGAGISGLYVTYCLTELYGVPGENICIVADYLPGDQSPTGYTSPWAGG 59
M+ +++P I +VGAG+ GL + L++L P I ++A Y P D+S YTSPWAG
Sbjct: 1 MTKENKPRDIVIVGAGVIGLTTAWILSDLGLAP--RIKVIAKYTPEDRS-VEYTSPWAGA 57
Query: 60 VWSCISPDDKNVMWYDRFTYENLPTLSEKLLDFYKGKDAEWLGLARRPSTELWDYQPPKA 119
+ IS D N + +D+ TY Y K G+ ELW+Y+P
Sbjct: 58 NFCSISATDDNALRWDKITYHRFA---------YLAKTRPEAGIRFADLRELWEYEPKHD 108
Query: 120 KINSLSQYLEEYKVLSKEELAKFKPEGAQFGIAFNSWNFNCPVFIVNLANFLKQKHNVRF 179
KI S + Y+ ++KV+ +++L P +G ++ N P ++ + L + V F
Sbjct: 109 KIRSWNTYVRDFKVIPEKDL----PGECIYGHKATTFLINAPHYLNYMYKLLIEA-GVEF 163
Query: 180 LKQKLTHIAQAKSFANKASKTDNGTHVVFNCTGLGSKKLSGVADHNLYPTRGQVAVISAP 239
K++L+HI + +AS VVFNCTGL + KL GV D ++YPTRG V ++ AP
Sbjct: 164 EKKELSHIKETVEETPEAS-------VVFNCTGLWASKLGGVEDPDVYPTRGHVVLVKAP 216
Query: 240 HIAESCLRYGKDYVTYIIPRPGKVHELVLGGFLQVDNWNAQDTSKEETDDILKRTTTLLP 299
H+ E+ + GK+ TYIIPRP ++ GGF+Q NW+ ++ E+T DILKRT+ L+P
Sbjct: 217 HVTETRILNGKNSDTYIIPRPLN-GGVICGGFMQPGNWD-REIHPEDTLDILKRTSALMP 274
Query: 300 KI---GNPENLPILKIAAGLRPSRYGGPRVEKEIKEESEHLVVVHNYGASGYGYQSGLGM 356
++ PE I++ G RPSR GG RVE ++ + + +VH+YGASG GYQ+G GM
Sbjct: 275 ELFHGKGPEGAEIIQECVGFRPSRKGGARVELDVVPGTS-VPLVHDYGASGTGYQAGYGM 333
Query: 357 AFKAVSLAFDK 367
A +V LA K
Sbjct: 334 ALDSVMLALPK 344
>Hs4503289 [E] KOG3923 D-aspartate oxidase
Length = 341
Score = 87.0 bits (214), Expect = 4e-17
Identities = 98/359 (27%), Positives = 161/359 (44%), Gaps = 44/359 (12%)
Query: 9 ITVVGAGISGLYVTYCLTELYGVPGENICIVADYLPGDQSPTGYTSPWAGGVWSCISPDD 68
I VVGAG+ GL C+++L VP ++ I++D D TS A G+ + D
Sbjct: 6 IAVVGAGVVGLSTAVCISKL--VPRCSVTIISDKFTPDT-----TSDVAAGMLIPHTYPD 58
Query: 69 KNV----MWYDRFTYENLPTLSEKLLDFYKGKDAEWLGLARRPSTELWDYQPPKAKINSL 124
+ W+ R T+ +L ++ +A G+ +++ P + ++
Sbjct: 59 TPIHTQKQWF-RETFNHLFAIANSA-------EAGDAGVHLVSGWQIFQSTPTE-EVPFW 109
Query: 125 SQYLEEYKVLSKEELAKFKPEGAQFGIAFNSWNFNCPVFIVNLANFLKQKHNVRFLKQKL 184
+ + ++ +++ EL KF P+ FG AF + CP ++ L +K ++
Sbjct: 110 ADVVLGFRKMTEAELKKF-PQYV-FGQAFTTLKCECPAYLPWLEKRIKGSGGWTLTRRIE 167
Query: 185 THIAQAKSFANKASKTDNGTHVVFNCTGLGSKKLSGVADHNLYPTRGQVAVISAPHIAES 244
SF +V NC+GLGS++L+G D ++P RGQV + AP + E
Sbjct: 168 DLWELHPSF-----------DIVVNCSGLGSRQLAG--DSKIFPVRGQVLQVQAPWV-EH 213
Query: 245 CLRYGKDYVTYIIPRPGKVHELVLGGFLQVDNWNAQDTSKEETDDILKRTTTLLPKIGNP 304
+R G +TYI P G H + LGG Q +WN + E + +IL R L P +
Sbjct: 214 FIRDGSG-LTYIYP--GTSH-VTLGGTRQKGDWNLSPDA-ENSREILSRCCALEPSLHGA 268
Query: 305 ENLPILKIAAGLRPSRYGGPRVEKEIKEESEHLVVVHNYGASGYGYQSGLGMAFKAVSL 363
N+ + GLRP R G + + + + L VVH+YG G G A +A L
Sbjct: 269 CNI---REKVGLRPYRPGVRLQTELLARDGQRLPVVHHYGHGSGGISVHWGTALEAARL 324
>CE07083 [E] KOG3923 D-aspartate oxidase
Length = 334
Score = 80.1 bits (196), Expect = 5e-15
Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 131 YKVLSKEELAKFKPEGAQFGIAFNSWNFNCPVFIVNLANFLKQKHNVRFLKQKLTHIAQA 190
++ L E PE ++ I + ++ ++ L N L ++ + F +Q++T +
Sbjct: 114 FRFLDDRERLDIFPEPSKHCIHYTAYASEGNKYVPYLKNLLLEQ-KIEFKQQEVTSLDAV 172
Query: 191 KSFANKASKTDNGTHVVFNCTGLGSKKLSGVADHNLYPTRGQVAVISAPHIAESCLRYGK 250
D G V+ NC GL KL+G D YP RG + + AP R
Sbjct: 173 ---------ADAGYDVIVNCAGLYGGKLAG-DDDTCYPIRGVILEVDAPWHKHFNYR--- 219
Query: 251 DYVTYIIPRPGKVHELVLGGFLQVDNWNAQDTSKEETDDILKRTTTLLPKIGNPENLPIL 310
D+ T+ IP K H +V+G Q + W+ + T E+ +DILKR L P + P+ I+
Sbjct: 220 DFTTFTIP---KEHSVVVGSTKQDNRWDLEITD-EDRNDILKRYIALHPGMREPK---II 272
Query: 311 KIAAGLRPSRYGGPRVEKEIKEE---SEHLVVVHNYGASGYGYQSGLGMAFKAVSL 363
K + LRP R R+E + + S+ +VVH+YG G+ G G A +A L
Sbjct: 273 KEWSALRPGRKH-VRIEAQKRTSVGNSKDYMVVHHYGHGSNGFTLGWGTAIEATKL 327
>Hs5231298 [E] KOG3923 D-aspartate oxidase
Length = 282
Score = 75.1 bits (183), Expect = 2e-13
Identities = 56/158 (35%), Positives = 81/158 (50%), Gaps = 11/158 (6%)
Query: 206 VVFNCTGLGSKKLSGVADHNLYPTRGQVAVISAPHIAESCLRYGKDYVTYIIPRPGKVHE 265
+V NC+GLGS++L+G D ++P RGQV + AP + E +R G +TYI P G H
Sbjct: 119 IVVNCSGLGSRQLAG--DSKIFPVRGQVLQVQAPWV-EHFIRDGSG-LTYIYP--GTSH- 171
Query: 266 LVLGGFLQVDNWNAQDTSKEETDDILKRTTTLLPKIGNPENLPILKIAAGLRPSRYGGPR 325
+ LGG Q +WN + E + +IL R L P + N+ + GLRP R G
Sbjct: 172 VTLGGTRQKGDWNLSPDA-ENSREILSRCCALEPSLHGACNI---REKVGLRPYRPGVRL 227
Query: 326 VEKEIKEESEHLVVVHNYGASGYGYQSGLGMAFKAVSL 363
+ + + + L VVH+YG G G A +A L
Sbjct: 228 QTELLARDGQRLPVVHHYGHGSGGISVHWGTALEAARL 265
>CE15718 [E] KOG3923 D-aspartate oxidase
Length = 343
Score = 74.7 bits (182), Expect = 2e-13
Identities = 71/254 (27%), Positives = 113/254 (43%), Gaps = 32/254 (12%)
Query: 131 YKVLSKEELAKFKPEGAQFGIAFNSWNFNCPVFIVNLANFLKQKHNVRFLKQKLTHIAQA 190
++ L K E+ P ++ I + ++ ++ L F Q V FL +K+ + +
Sbjct: 111 FRFLEKREILDLFPNPSEHCIHYTAFASEGNKYVPYL-KFQCQARGVEFLHRKVRDLEEL 169
Query: 191 KSFANKASKTDNGTHVVFNCTGLGSKKLSGVADHNLYPTRGQVAVISAPHIAESCLRYGK 250
+ G V+ NC GL L+G D ++YP RG V + A Y K
Sbjct: 170 ---------ANEGYDVIVNCAGLSGGTLAG-DDDSVYPIRGVVLDVEAHW--HKHFNY-K 216
Query: 251 DYVTYIIPRPGKVHELVLGGFLQVDNWNAQDTSKEETDDILKRTTTLLPKIGNPENLPIL 310
D++T+ IP+ V V+G Q + W+ + T + D IL+R L P + P+ IL
Sbjct: 217 DFITFTIPKENSV---VIGSVKQENRWDLEITDVDRKD-ILERYVALHPAMREPK---IL 269
Query: 311 KIAAGLRPSR--YGGPRVEKEIKEESEHLVV---------VHNYGASGYGYQSGLGMAFK 359
+GLRP+R +VEK+ ++ + V VH+YG G G+ G G A +
Sbjct: 270 GEWSGLRPARKTIRIEKVEKKSEKSGKKYTVSSKKKGKNVVHHYGHGGNGFTLGWGTAVE 329
Query: 360 AVSLAFDKQRPSKL 373
A L SKL
Sbjct: 330 ATKLVKSALNSSKL 343
>HsM4503255 [E] KOG3923 D-aspartate oxidase
Length = 347
Score = 71.6 bits (174), Expect = 2e-12
Identities = 90/361 (24%), Positives = 146/361 (39%), Gaps = 40/361 (11%)
Query: 9 ITVVGAGISGLYVTYCLTELYGVPGENICIVADYLPGDQSPTGYTSPWAGGVWSCISPDD 68
+ V+GAG+ GL C+ E Y + + I + D+ T+ A G+W D
Sbjct: 3 VVVIGAGVIGLSTALCIHERYHSVLQPLHIK---VYADRFTPLTTTDVAAGLWQPYLSDP 59
Query: 69 KNVMWYDRFTYENLPTLSEKLLDFYKGKDAEWLGLARRPSTELWDYQPPKAKINSLSQYL 128
N D ++ + + LL +AE LGL L+ P S +
Sbjct: 60 NNPQEAD-WSQQTF----DYLLSHVHSPNAENLGLFLISGYNLFHEAIPDP---SWKDTV 111
Query: 129 EEYKVLSKEELAKFKPEGAQFGIAFNSWNFNCPVFIVNLANFLKQKHNVRFLKQKLTHIA 188
++ L+ EL F G W + + L+ K+ +++L ++LT
Sbjct: 112 LGFRKLTPRELDMFPDYGY-------GW--------FHTSLILEGKNYLQWLTERLTERG 156
Query: 189 QAKSFANKASKTDN----GTHVVFNCTGLGSKKLSGVADHNLYPTRGQVAVISAPHIAES 244
K F K + G V+ NCTG+ + L D L P RGQ+ + AP +
Sbjct: 157 -VKFFQRKVESFEEVAREGADVIVNCTGVWAGALQ--RDPLLQPGRGQIMKVDAPWMKHF 213
Query: 245 CLRYGKDYVTYIIPR--PGKVHELVLGGFLQVDNWNAQDTSKEETDDILKRTTTLLPKIG 302
L + + Y P PG + LGG Q+ NW+ + ++ + I + L P +
Sbjct: 214 ILTHDPERGIYNSPYIIPG-TQTVTLGGIFQLGNWSELNNIQDH-NTIWEGCCRLEPTL- 270
Query: 303 NPENLPILKIAAGLRPSRYGGPRVEKEIKEESEHLVVVHNYGASGYGYQSGLGMAFKAVS 362
+N I+ A G RP R ++++ + V+HNYG GYG G A +A
Sbjct: 271 --KNARIIGEATGFRPVRPQIRLEREQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAAK 328
Query: 363 L 363
L
Sbjct: 329 L 329
>CE26739 [E] KOG3923 D-aspartate oxidase
Length = 502
Score = 70.9 bits (172), Expect = 3e-12
Identities = 96/377 (25%), Positives = 156/377 (40%), Gaps = 66/377 (17%)
Query: 7 PLITVVGAGISGLYVTYCLTELYGVPGENICIVADYLPGDQSPTGYTSPWAGGV--WSCI 64
P I V+GAGI+G+ + E +P + I+A+ SP + AG + + C
Sbjct: 2 PKIAVLGAGINGIASALAIQER--LPNCEVTIIAEKF----SPNTTSDVAAGLIEPFLCD 55
Query: 65 SPDDKNVMWYDRFTYENLPTLSEKLLDFYKGKDAE---WLGLARRPSTELWDYQPPKAKI 121
D+ + W T + + E D G + + WL + +P K+
Sbjct: 56 DDVDRIINW----TSATISRIHEYQADGNPGAEEQSGYWLQSVKS--------EPKWLKL 103
Query: 122 NSLSQYLEEYKVLSKEELAKF--KPEGAQFGIAFNSWNFNCPVFIVNLANFLKQKHNVRF 179
++ +L+ E+ + +PE +FGI + +W P + K+ +F
Sbjct: 104 ------MKNVHILTDAEMKQVARRPEH-KFGIFYTTWYLE-PTPYIKWCTDKFLKNGGKF 155
Query: 180 LKQKLTHIAQ-AKSFANKASKTDNGTHVVFNCTGLGSKKLSGVADHNLYPTRGQVAVISA 238
KQK+ +I A+S+ V NCTGLGS+ L G D +YPTRGQ+ +S
Sbjct: 156 KKQKIENIDDVARSY-----------DVTVNCTGLGSRALIG--DKEVYPTRGQILKVSC 202
Query: 239 PHIAESCLRYGKDYVTYIIPRPGKVHELVLGGFLQVDNWNAQDTSKEETDDILKRTTTLL 298
P + + D Y + + LGG + W+ S E + ILK +
Sbjct: 203 PRVKHFFI----DDKYYALLNDSTI---TLGGTFEAHQWDLTINS-ELSQKILKENIHNI 254
Query: 299 PKIGNPENLPILKIAAGLRPSRYGGPRVEKEIKEESEHLVVVHNYGASGYGYQSGLGMAF 358
P + + IL +R SR G R++ E+ +VHNYG G G G A
Sbjct: 255 PSLRTAQ---ILSSHVDMRXSR-GTVRLQAELGRS-----LVHNYGHGGSGITLHWGCAL 305
Query: 359 KAVSLAFD--KQRPSKL 373
+ + + K + SKL
Sbjct: 306 ECAEIVENVLKMKKSKL 322
>Hs21536470 [E] KOG3923 D-aspartate oxidase
Length = 347
Score = 69.7 bits (169), Expect = 7e-12
Identities = 89/361 (24%), Positives = 145/361 (39%), Gaps = 40/361 (11%)
Query: 9 ITVVGAGISGLYVTYCLTELYGVPGENICIVADYLPGDQSPTGYTSPWAGGVWSCISPDD 68
+ V+GAG+ GL C+ E Y + + I + D+ T+ A G+W D
Sbjct: 3 VVVIGAGVIGLSTALCIHERYHSVLQPLHIK---VYADRFTPLTTTDVAAGLWQPYLSDP 59
Query: 69 KNVMWYDRFTYENLPTLSEKLLDFYKGKDAEWLGLARRPSTELWDYQPPKAKINSLSQYL 128
N D ++ + + LL +AE LGL L+ P S +
Sbjct: 60 NNPQEAD-WSQQTF----DYLLSHVHSPNAENLGLFLISGYNLFHEAIPDP---SWKDTV 111
Query: 129 EEYKVLSKEELAKFKPEGAQFGIAFNSWNFNCPVFIVNLANFLKQKHNVRFLKQKLTHIA 188
++ L+ EL F G W + + L+ K+ +++L ++LT
Sbjct: 112 LGFRKLTPRELDMFPDYGY-------GW--------FHTSLILEGKNYLQWLTERLTERG 156
Query: 189 QAKSFANKASKTDN----GTHVVFNCTGLGSKKLSGVADHNLYPTRGQVAVISAPHIAES 244
K F K + G V+ NCTG+ + L D L P RGQ+ + AP +
Sbjct: 157 -VKFFQRKVESFEEVAREGADVIVNCTGVWAGALQ--RDPLLQPGRGQIMKVDAPWMKHF 213
Query: 245 CLRYGKDYVTYIIPR--PGKVHELVLGGFLQVDNWNAQDTSKEETDDILKRTTTLLPKIG 302
L + + Y P PG + LGG Q+ NW+ + ++ + I + L P +
Sbjct: 214 ILTHDPERGIYNSPYIIPG-TQTVTLGGIFQLGNWSELNNIQDH-NTIWEGCCRLEPTL- 270
Query: 303 NPENLPILKIAAGLRPSRYGGPRVEKEIKEESEHLVVVHNYGASGYGYQSGLGMAFKAVS 362
+N I+ G RP R ++++ + V+HNYG GYG G A +A
Sbjct: 271 --KNARIIGERTGFRPVRPQIRLEREQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAAK 328
Query: 363 L 363
L
Sbjct: 329 L 329
>CE09514 [E] KOG3923 D-aspartate oxidase
Length = 383
Score = 60.5 bits (145), Expect = 4e-09
Identities = 51/163 (31%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 206 VVFNCTGLGSKKLSGVADHNLYPTRGQVAVISAPHIAESCLRYGKDYVTYIIPRPGKVHE 265
VV N GL L+G N+ P RG + + AP R D+ T IP +
Sbjct: 202 VVVNSAGLLGGVLAGDDAGNMKPIRGVLIRVDAPWQKHFLYR---DFSTITIP---VIDH 255
Query: 266 LVLGGFLQVDNWNAQDTSKEETDDILKRTTTLLPKIGNPENLPILKIAAGLRPSRYGGPR 325
+ +G Q + + + + DI R L P + + +L G RP R R
Sbjct: 256 VYMGTVKQEGAFGPNNVTSADIQDITSRYVALQPSF---KRVHMLSSFVGYRPGRKQ-VR 311
Query: 326 VEKEIKEE--SEHLVVVHNYGASGYGYQSGLGMAFKAVSLAFD 366
VEK+I+E S+ VVHNYG SG G+ G G A A + D
Sbjct: 312 VEKQIRETNGSKKFTVVHNYGHSGNGFTLGYGSAVHAAHIVLD 354
>7303710 [E] KOG3923 D-aspartate oxidase
Length = 307
Score = 58.9 bits (141), Expect = 1e-08
Identities = 47/121 (38%), Positives = 61/121 (49%), Gaps = 11/121 (9%)
Query: 248 YGKDYVTYIIPRPGKVHELVLGGFLQVDNWNAQDTSKEETDDILKRTTTLLPKIGNPENL 307
YG DY TY++P + LGG Q D++N + K ++ I +R LLP + E
Sbjct: 188 YG-DYDTYVLPG---FETVTLGGCRQFDSYNTE-WCKYDSMAIRERCYDLLPSLRKAE-- 240
Query: 308 PILKIAAGLRPSRYGGPRVEKEI--KEESEHLVVVHNYGASGYGYQSGLGMAFKAVSLAF 365
I++ GLRP R RVE E+ E L VVHNYG GYG + G A AV L
Sbjct: 241 -IVRECVGLRPHR-SVVRVEPELITNPEGRRLKVVHNYGHGGYGVTTAPGTAMYAVRLVR 298
Query: 366 D 366
D
Sbjct: 299 D 299
>7297177 [E] KOG3923 D-aspartate oxidase
Length = 341
Score = 57.4 bits (137), Expect = 3e-08
Identities = 92/378 (24%), Positives = 158/378 (41%), Gaps = 49/378 (12%)
Query: 7 PLITVVGAGISGLYVTYCLTELYGVPGEN----ICIVADYLPGDQSPTGYTSPWAGGVWS 62
P I V+GAG++G+ + E Y G+ I D+ P + TG S G +
Sbjct: 2 PNIAVIGAGVNGVASAIKILEHYVNDGKTPIKVTIISEDFTP---NTTGDGSAGLWGPYL 58
Query: 63 CISPDDKNVMWYDRFTYENLPTLSEKLLDFYKGKDAEWLGLARRPSTELWDYQPPKAKIN 122
V + + ++ L EK+ + +DA G+ P L + ++
Sbjct: 59 LGGTSQAKVYKWSKSMHQFL----EKI---WLSEDAGEAGVCLLPCIRL-----STSTVD 106
Query: 123 SLSQYLEEYKV----LSKEELAKF-KPEGAQF--GIAFNSWNFNCPVFIVNLANFLKQKH 175
++ + + LSKE+LA + K +F G++F ++ + L +
Sbjct: 107 TVEDFWRDIVYGAVDLSKEQLAAYNKGRSVKFTSGLSFVTYTSEPIKLLPYLMKRFTRNG 166
Query: 176 NVRFLKQKLTHIAQAKSFANKASKTDNGTHVVFNCTGLGSKKLSGVADHNLYPTRGQVAV 235
V +++++T + A D+ V+ NC+GLGSK L + D +Y RGQV+
Sbjct: 167 GV-VVRKRITDL--------DAFVADSEYDVIVNCSGLGSKTL--LNDDQMYAVRGQVSR 215
Query: 236 ISAPHIAESCLRYGKDYVTYIIPRPGKVHELVLGGFLQVDNWNAQDTSKEETDDILKRTT 295
+ A I + L D YIIP +VLGG Q ++N + + + I+
Sbjct: 216 VRANWIFSAVLDESDD-GNYIIP---NTESVVLGGTHQERDYNTK-VCQNDRRMIVDGCQ 270
Query: 296 TLLPKIGNPENLPILKIAAGLRPSRYGGPRVEKEIKEESEHLVVVHNYGASGYGYQSGLG 355
+P + E+ L GLRP R ++ E + L ++HNYG G G G
Sbjct: 271 RYIPGL---EHTECLFDWVGLRPGR---TQLRLEAERRGRKL-LIHNYGHGGSGVTLCWG 323
Query: 356 MAFKAVSLAFDKQRPSKL 373
A +++ + SKL
Sbjct: 324 CADDVLNILLAAKNGSKL 341
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,130,171
Number of Sequences: 60738
Number of extensions: 1176938
Number of successful extensions: 2666
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2638
Number of HSP's gapped (non-prelim): 12
length of query: 373
length of database: 30,389,216
effective HSP length: 108
effective length of query: 265
effective length of database: 23,829,512
effective search space: 6314820680
effective search space used: 6314820680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)