ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI0746 good J KOG2315 Translation, ribosomal structure and biogenesis Predicted translation initiation factor related to eIF-3a
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI0746 247871 249625 585
(585 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR054w [J] KOG2315 Predicted translation initiation factor rela... 642 0.0
SPBC4B4.04 [J] KOG2315 Predicted translation initiation factor r... 311 1e-84
CE03122 [J] KOG2315 Predicted translation initiation factor rela... 206 1e-52
Hs14042941 [J] KOG2315 Predicted translation initiation factor r... 195 2e-49
Hs22041890 [J] KOG2315 Predicted translation initiation factor r... 190 6e-48
At1g73180 [J] KOG2315 Predicted translation initiation factor re... 189 1e-47
7296500 [J] KOG2315 Predicted translation initiation factor rela... 179 8e-45
Hs4503527 [J] KOG2314 Translation initiation factor 3 subunit b ... 80 1e-14
At5g27640 [J] KOG2314 Translation initiation factor 3 subunit b ... 76 1e-13
At5g25780 [J] KOG2314 Translation initiation factor 3 subunit b ... 74 5e-13
SPAC25G10.08 [J] KOG2314 Translation initiation factor 3 subunit... 69 3e-11
ECU11g0670 [J] KOG2315 Predicted translation initiation factor r... 66 1e-10
7302767 [J] KOG2314 Translation initiation factor 3 subunit b (e... 62 2e-09
>YGR054w [J] KOG2315 Predicted translation initiation factor related to
eIF-3a
Length = 642
Score = 642 bits (1656), Expect = 0.0
Identities = 348/637 (54%), Positives = 425/637 (66%), Gaps = 74/637 (11%)
Query: 1 MSFQLFAKTNSTVEVFQGYPSFEEISSSKSGNDGTEGKVIQSLLSPCGRFMAKSYESKVV 60
MS Q F KT+ +E+FQ YP+FE+ S + + VI S+LSPCGRF+A S + V
Sbjct: 1 MSSQFFLKTSQDIELFQSYPTFEQ-----SNTNSKDFPVISSVLSPCGRFLALSTKENVK 55
Query: 61 LLIGETWEITLVELPLKNVYDLKFSPSGNFLSTWERPLVDDTEHLNCKIWNLNESPLSTE 120
+ G + L+ + L +VYDL FSP+GN+LSTWER + D H N K+W LN+ P +
Sbjct: 56 VFTGPCLDNVLLTMKLSDVYDLHFSPAGNYLSTWERASIQDPNHKNVKVWYLNK-PFKKD 114
Query: 121 -------PKYSYKASTQSSWTLQFSKLDDYAIKSFGKELRIIKLSGE--DTFKFDKPFAT 171
P Y Y+A +QS W LQFSKLD+Y ++ F +L+I+KLS D F F PFA
Sbjct: 115 CVSEDIVPAYEYQAKSQSGWFLQFSKLDNYGLRLFKHDLKIVKLSSANADNFDFQSPFAV 174
Query: 172 LTPD---QPFTTYQISPAEHPTICTFTKEKSGKPAQLTIWPITTGKITKQIVTKQFFKAD 228
L+ D Q FTTY ISPAEHPTICTFT EK GKPAQL IW ++ GKITK+I +K FFKAD
Sbjct: 175 LSDDETSQHFTTYLISPAEHPTICTFTPEKGGKPAQLIIWALSEGKITKKIASKTFFKAD 234
Query: 229 SCHLKWSDLGNAILCLTTTDFDHSNKSYYGENNLYLLSFQGVNGALGGESVRVSLGKEGP 288
SC LKW+ LGNAILCL TDFD SNKSYYGEN LYLLSFQGVNG LGG SVRVSL GP
Sbjct: 235 SCQLKWNPLGNAILCLAITDFDSSNKSYYGENTLYLLSFQGVNGTLGGNSVRVSL-TTGP 293
Query: 289 IHDFNWSPTSRQFGVIYGFMPATITFFDLKGNAIHSLNEQRKNTLEFSPNGKYILVGGFG 348
+HDF WSPTSRQFGVI G+MPATI+FFDL+GN +HSL +Q KNT+ FSP+G YIL+ GFG
Sbjct: 294 VHDFTWSPTSRQFGVIAGYMPATISFFDLRGNVVHSLPQQAKNTMLFSPSGHYILIAGFG 353
Query: 349 NLQGSVDILDRHDKFRCISKFSATNTSVCKWSPGGEFILTATTSPRLRVDNGLKIWHYSG 408
NLQGSV+ILDR DKF+C+SKF ATNTSVCKWSPGGEFI+TATTSPRLRVDNG+KIWH SG
Sbjct: 354 NLQGSVEILDRLDKFKCVSKFDATNTSVCKWSPGGEFIMTATTSPRLRVDNGVKIWHVSG 413
Query: 409 TLVFVKEYKELLKVDWRTNCPFRII--------KDGYVTNGNKLKDEELKQ-DPKI-RKH 458
+LVFVKE+KELLKVDWR+ C ++ + ++ + N L D DPKI K
Sbjct: 414 SLVFVKEFKELLKVDWRSPCNYKTLENKDEAFFENHIINNWEPLPDSTTSSLDPKISNKS 473
Query: 459 QLEIHPVVTQFNLKNPNK--SSTNLGAK-KTTGAYKPPHARK---ATVVPG--------- 503
+L+IH V ++ ++P++ SS G+K K GAYKPPHAR+ +VPG
Sbjct: 474 ELQIHSSVQEYISQHPSREASSNGNGSKAKAGGAYKPPHARRTGGGRIVPGVPPGAAKKT 533
Query: 504 --------------TTKTRAXXXXXXXXXXXXAAS----------------QTSPEEKKI 533
TK R ++ +TSPEEKKI
Sbjct: 534 IPGLVPGMSANKDANTKNRRRRANKKSSETSPDSTPAPSAPASTNAPTNNKETSPEEKKI 593
Query: 534 RSLLKKLRAIESLKVKQTEGVKLENTQVTKIQSEPKI 570
RSLLKKLRAIE+LK +Q G KLE+TQV KIQ+E K+
Sbjct: 594 RSLLKKLRAIETLKERQAVGDKLEDTQVLKIQTEEKV 630
>SPBC4B4.04 [J] KOG2315 Predicted translation initiation factor related to
eIF-3a
Length = 576
Score = 311 bits (798), Expect = 1e-84
Identities = 209/596 (35%), Positives = 285/596 (47%), Gaps = 93/596 (15%)
Query: 14 EVFQGYPSFEEISSSKSGNDGTEGKVIQSLLSPCGRFMAKSYESKVVLLIGETWEITLVE 73
E + P FE IS + SP G+ A + ++VV+ E+ L +
Sbjct: 22 ENYASPPKFEAISEPARN----------ACYSPNGKLFAYATATQVVINDTESGA-KLTQ 70
Query: 74 LPLKNVYDLKFSPSGNFLSTWERP--LVDDTEHLNCKIWNLNESPLSTEPKYSYKASTQS 131
LP N Y+L FSP G +LSTWERP D T N K+WN L +S+ Q+
Sbjct: 71 LPAANTYELGFSPLGKYLSTWERPGKEADGTPKQNMKVWNTETGQLV----FSFVQRNQT 126
Query: 132 SWTLQFSKLDDYAIKSFGKELRIIKLSGEDTFKFDK-PFATLTPDQPFTTYQISPAEHPT 190
W LQ++ + A + E+ +T K P A L + + + +SP ++
Sbjct: 127 GWNLQYTCDESLAARLVTNEVHFY-----ETGNMSKGPIAKLRVEG-ISDFALSPGQNHA 180
Query: 191 ICTFTKEKSGKPAQLTIWPITTGKITKQIVTKQFFKADSCHLKWSDLGNAILCLTTTDFD 250
+ F EK G PA + + I + K FFKAD KW+ LG ++L LT T+ D
Sbjct: 181 VAVFIPEKKGAPASVRTYSIPN--FNSPLSQKTFFKADKVQFKWNALGTSLLVLTQTEVD 238
Query: 251 HSNKSYYGENNLYLLSFQGVNGALGGESVRVSLGKEGPIHDFNWSPTSRQFGVIYGFMPA 310
SNK+YYGE NLYLL G G RV L +EGPIHD W+ S++FG++YG+MPA
Sbjct: 239 KSNKNYYGETNLYLL------GITGQFDCRVDLDREGPIHDVCWNADSKEFGIVYGYMPA 292
Query: 311 TITFFDLKGNAIHSLNEQRKNTLEFSPNGKYILVGGFGNLQGSVDILDRHDKFRCISKFS 370
FD + N + + +NTL FSPN +YIL+ GFGNLQGS+DI D + + I+
Sbjct: 293 KTAIFDNRANVVSIIPPAPRNTLIFSPNSRYILLAGFGNLQGSIDIFDAANNMKKITTVE 352
Query: 371 ATNTSVCKWSPGGEFILTATTSPRLRVDNGLKIWHYSGTLVFVKEYKELLKVDWRTNCPF 430
A N + C++SP +F+LTA TSPRLRVDN +KIWH +G +F +E+ EL + WR
Sbjct: 353 AANCTYCEFSPDSQFLLTAVTSPRLRVDNSIKIWHITGAPMFYEEFNELYQAFWRP---- 408
Query: 431 RIIKDGYVTNGNKLKDEELKQDPKIRKHQLEIHPVVTQFNLKNPNKSSTNLGAK---KTT 487
R + + N L L P P+ S++ L AK K
Sbjct: 409 RPLNPTLLQNA--LTSASLPSPP-------------------TPHASASKLAAKPSVKPA 447
Query: 488 GAYKPPHAR----------------------------KATVVPGTTKTRAXXXXXXXXXX 519
GAY+PP AR + VVPG T
Sbjct: 448 GAYRPPGARGQNSTFSYRREEIDVMSSGSANKHVNSSRQRVVPGATPVIDGNKKNNKKTK 507
Query: 520 XXAASQTSP-----EEKKIRSLLKKLRAIESLKVKQTEGVKLENTQVTKIQSEPKI 570
P +EKKIRSL KKLRAI+ LK + KLE TQV KI+SE K+
Sbjct: 508 PAVKQVAQPTAEVSDEKKIRSLCKKLRAIDDLKSRLNNNEKLEATQVKKIESEGKV 563
>CE03122 [J] KOG2315 Predicted translation initiation factor related to
eIF-3a
Length = 618
Score = 206 bits (523), Expect = 1e-52
Identities = 158/541 (29%), Positives = 248/541 (45%), Gaps = 77/541 (14%)
Query: 60 VLLIGETWEITLVELPLKNVYDLKFSPSGNFLSTWE-------RPLVDDTEHLNCKIWNL 112
V I EI VEL K + FSP NFL T+E + + N ++++L
Sbjct: 110 VFEIATNKEILCVEL--KRTRKILFSPKDNFLLTFEPWAVYGPKTAENQKPEPNVRVYSL 167
Query: 113 NESPLSTEPKYSYKASTQSSWTLQFSKLDDYAIKSFGKELRIIKLSGEDTFKFDKPFATL 172
+ + ++ A ++SW QFS + A + G E+ FD+ L
Sbjct: 168 ADGKHVS----TFSAPKEASWEPQFSDDESLAARMVGSEVFFYT-----NMSFDRYDHKL 218
Query: 173 TPDQPFTTYQISPAEHPT-ICTFTKEKSGKPAQLTIWPITTGKITKQIVTKQFFKADSCH 231
++ T + +SP P + + PA++ + ++ + + FFK+D
Sbjct: 219 V-EKGATNFALSPGPAPNHVAVYVPAVGSTPARVRVHRVSES--FPVVGNRTFFKSDKAV 275
Query: 232 LKWSDLGNAILCLTTTDFDHSNKSYYGENNLYLLSFQGVNGALGGESVRVSLGKEGPIHD 291
+ W+ G ++L L + + D +N+SYYGE +LYL++ Q GESV V L K+GPI+
Sbjct: 276 MTWNQRGQSLLILASVEVDKTNQSYYGEQSLYLINIQS------GESVVVPLEKKGPIYA 329
Query: 292 FNWSPTSRQFGVIYGFMPATITFFDLKGNAIHSLNEQRKNTLEFSPNGKYILVGGFGNL- 350
W+P R+F V YG+MPA +TF++ +G I E +N + ++ G +L+ GFGN+
Sbjct: 330 AKWNPNGREFAVCYGYMPAKVTFYNPRGVPIFDTIEGPRNDVFYNAFGNIVLICGFGNIA 389
Query: 351 QGSVDILDRHDKFRCISKFSATNTSVCKWSPGGEFILTATTSPRLRVDNGLKIWHYSGTL 410
+G ++ D K IS NT++ W+P G+ +T TT+PRLR+DN + WHY+G +
Sbjct: 390 KGKMEFWDVETKKEIIS-IEVPNTTLFDWAPDGQHFVTCTTAPRLRIDNSYRFWHYTGRM 448
Query: 411 VFVKEY---KELLKVDWRTNCPFRIIKDGYVTNGNKLKDEELKQDPK------IRKHQLE 461
+ + KEL +V WR +T NK +EL + K IRK
Sbjct: 449 LAETHFESPKELWEVRWRP-----------MTGYNKFAIKELTKTDKMAAGLPIRKKDAS 497
Query: 462 IHPVVTQFNLKNPNKSSTNLGAKKTTGAYKPPHARK-------------ATVVPGTTKTR 508
HP+ ++ GA + GAY PPH RK A PG R
Sbjct: 498 -HPL-----------NNVPAGAVRQAGAYIPPHLRKPLGGGGSAGPPSAAAPTPGNQNQR 545
Query: 509 AXXXXXXXXXXXXA--ASQTSPEEKKIRSLLKKLRAIESLKVKQTEGVKLENTQVTKIQS 566
Q S +E+K L KK+ I+ LK + G +L+ Q+ KIQ
Sbjct: 546 PAQPRANGNGNAPQPFRPQQSEQERKAFQLKKKVEEIKVLKQRVANGDQLQPNQMEKIQR 605
Query: 567 E 567
E
Sbjct: 606 E 606
>Hs14042941 [J] KOG2315 Predicted translation initiation factor related to
eIF-3a
Length = 609
Score = 195 bits (495), Expect = 2e-49
Identities = 151/525 (28%), Positives = 235/525 (44%), Gaps = 73/525 (13%)
Query: 82 LKFSPSGNFLSTWERPLVDDTEHLNCKIWNLNESPLSTEPKYSYKASTQSSWTLQFSKLD 141
L+FSP L+TW+ L + T K S+ +W +S+ +
Sbjct: 105 LEFSPKNTVLATWQPYSTSKDGTAGIPNLQLYDVKTGTCLK-SFIQKKMQNWCPSWSEDE 163
Query: 142 DYAIKSFGKELRIIKLSGEDTFKFDKPFATLTPDQPFTTYQISPAEHP-TICTFTKEKSG 200
++ E+ + + +T A Q + +SP P + + G
Sbjct: 164 TLCARNVNNEVHFFENNNFNTI------ANKLHLQKINDFVLSPGPQPYKVAVYVPGSKG 217
Query: 201 KPA--QLTIWPITTGKITKQIVTKQFFKADSCHLKWSDLGNAILCLTTTDFDHSNKSYYG 258
P+ +L +P G + K FFKAD + W+ A+L + +TD D + SYYG
Sbjct: 218 APSFVRLYQYPNFAGPHAA-LANKSFFKADKVTMLWNKKATAVLVIASTDVDKTGASYYG 276
Query: 259 ENNLYLLSFQGVNGALGGESVRVSLGKEGPIHDFNWSPTSRQFGVIYGFMPATITFFDLK 318
E L+ + A GES V L K GPI+D W+ +S +F +YGFMPA T F+LK
Sbjct: 277 EQTLHYI-------ATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKATIFNLK 329
Query: 319 GNAIHSLNEQRKNTLEFSPNGKYILVGGFGNLQGSVDILDRHDKFRCISKFSATNTSVCK 378
+ + +N +SP+G +++ GFGNL+G +++ D + ++ ISK A++++
Sbjct: 330 CDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKN-YKLISKPVASDSTYFA 388
Query: 379 WSPGGEFILTATTSPRLRVDNGLKIWHYSGTLVF---VKEYKELLKVDWRTNCPF----- 430
W P GE ILTAT +PRLRV+NG KIWHY+G+++ V EL +V W+ PF
Sbjct: 389 WCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQ---PFLDGIF 445
Query: 431 ---------------------------RIIKDGYVTNGNKLKDEELKQDPKIRKHQLEIH 463
+++ +TN +KL +EE P+ K Q
Sbjct: 446 PAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITN-SKLHEEE---PPQNMKPQSGND 501
Query: 464 PVVTQFNLKNPNKSSTNLGAKKTTGAYKPPHARKATVVPGTTKTRAXXXXXXXXXXXXAA 523
+++ LKN K AK+ + K P T +
Sbjct: 502 KPLSKTALKNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISG-------- 553
Query: 524 SQTSPE-EKKIRSLLKKLRAIESLKVKQTEGVKLENTQVTKIQSE 567
PE +KKI++L KKL+AIE LK + G +LE Q+ KIQ E
Sbjct: 554 ---DPEIDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKE 595
>Hs22041890 [J] KOG2315 Predicted translation initiation factor related to
eIF-3a
Length = 458
Score = 190 bits (482), Expect = 6e-48
Identities = 135/431 (31%), Positives = 204/431 (47%), Gaps = 66/431 (15%)
Query: 176 QPFTTYQISPAEHP-TICTFTKEKSGKPA--QLTIWPITTGKITKQIVTKQFFKADSCHL 232
Q + +SP P + + G P+ +L +P G + K FFKAD +
Sbjct: 41 QKINDFVLSPGPQPYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAA-LANKSFFKADKVTM 99
Query: 233 KWSDLGNAILCLTTTDFDHSNKSYYGENNLYLLSFQGVNGALGGESVRVSLGKEGPIHDF 292
W+ A+L + +TD D + SYYGE L+ + A GES V L K GPI+D
Sbjct: 100 LWNKKATAVLVIASTDVDKTGASYYGEQTLHYI-------ATNGESAVVQLPKNGPIYDV 152
Query: 293 NWSPTSRQFGVIYGFMPATITFFDLKGNAIHSLNEQRKNTLEFSPNGKYILVGGFGNLQG 352
W+ +S +F +YGFMPA T F+LK + + +N +SP+G +++ GFGNL+G
Sbjct: 153 VWNSSSTEFCAVYGFMPAKATIFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRG 212
Query: 353 SVDILDRHDKFRCISKFSATNTSVCKWSPGGEFILTATTSPRLRVDNGLKIWHYSGTLVF 412
+++ D + ++ ISK A++++ W P GE ILTAT +PRLRV+NG KIWHY+G+++
Sbjct: 213 QMEVWDVKN-YKLISKPVASDSTYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILH 271
Query: 413 ---VKEYKELLKVDWRTNCPF--------------------------------RIIKDGY 437
V EL +V W+ PF +++
Sbjct: 272 KYDVPSNAELWQVSWQ---PFLDGIFPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKP 328
Query: 438 VTNGNKLKDEELKQDPKIRKHQLEIHPVVTQFNLKNPNKSSTNLGAKKTTGAYKPPHARK 497
+TN +KL +EE P+ K Q +++ LKN K AK+ + K P
Sbjct: 329 ITN-SKLHEEE---PPQNMKPQSGNDKPLSKTALKNQRKHEAKKAAKQEARSDKSPDLAP 384
Query: 498 ATVVPGTTKTRAXXXXXXXXXXXXAASQTSPE-EKKIRSLLKKLRAIESLKVKQTEGVKL 556
T + PE +KKI++L KKL+AIE LK + G +L
Sbjct: 385 TPAPQSTPRNTVSQSISG-----------DPEIDKKIKNLKKKLKAIEQLKEQAATGKQL 433
Query: 557 ENTQVTKIQSE 567
E Q+ KIQ E
Sbjct: 434 EKNQLEKIQKE 444
>At1g73180 [J] KOG2315 Predicted translation initiation factor related to
eIF-3a
Length = 513
Score = 189 bits (479), Expect = 1e-47
Identities = 125/454 (27%), Positives = 209/454 (45%), Gaps = 45/454 (9%)
Query: 56 ESKVVLLIGETWEITLVE-LPLKNVYDLKFSPSGNFLSTWERPLVDDTEHLNCKIWNLNE 114
+S V+ I + +T V + NV + SP G +L T+++P + N IWN
Sbjct: 55 KSDGVISIYDATSLTEVRSFTIANVTAAELSPCGTYLQTFQKPTTPQEK--NVSIWNTET 112
Query: 115 SPLSTEPKYSYKASTQSSW-TLQFSKLDDYAIKSFGKELRIIKLSGEDTFKFDKPFATLT 173
L+ + K+ T++SW +++F + A + E++ D F K +
Sbjct: 113 GDLAHS--HYQKSITKASWPSIRFCPDESSACRLATNEVQFF-----DPKDFSKGITSRI 165
Query: 174 PDQPFTTYQISPAEHPTICTFTKEKSGKPAQLTIWPITTGKITKQIVTKQFFKADSCHLK 233
+++S + F E G P + I+ ++ + FF+ S
Sbjct: 166 RVPGIAAFELSKTPASHVAVFVPESKGSPGSVQIFGCGEELQSQPSARRSFFRCSSVQFS 225
Query: 234 WSDLGNAILCLTTTDFDHSNKSYYGENNLYLLSFQGVNGALGGESVRVSLGKEGPIHDFN 293
W+ +L + +D D +N+SYYGE L+ L+ G + L V L KEGP+HD
Sbjct: 226 WNHGSTGLLVVVQSDVDKTNQSYYGETKLHYLTIDGTHEGL------VPLRKEGPVHDVQ 279
Query: 294 WSPTSRQFGVIYGFMPATITFFDLKGNAIHSLNEQRKNTLEFSPNGKYILVGGFGNLQGS 353
WS + +F V+YGFMPA +T FD + L E NTL ++P G+ + V GFGNL G
Sbjct: 280 WSFSGSEFAVVYGFMPACVTIFDKNCKPLMELGEGPYNTLRWNPKGRVLCVAGFGNLPGD 339
Query: 354 VDILDRHDKFRCISKFSATNTSVCKWSPGGEFILTATTSPRLRVDNGLKIWHYSGTLVFV 413
+ D +K + + A + +WSP G + LTA+T+PR ++DNG+KI++Y G +
Sbjct: 340 MAFWDVVNK-KQLGSNKAEWSVTSEWSPDGRYFLTASTAPRRQIDNGMKIFNYDGKRYYK 398
Query: 414 KEYKELLKVDWRTNCPFR------IIKDGYVTNGNKLKDEELKQDPKIRKHQLEIHPVVT 467
K ++ L + +W+ P R +IK KL + + + +K + +P+
Sbjct: 399 KMFERLYQAEWKPESPERFGDISELIKS---VESLKLGEGKSQGQGSAQKKTIAPNPIA- 454
Query: 468 QFNLKNPNKSSTNLGAKKTTGAYKPPHARKATVV 501
+ AY+PPHA+ A V
Sbjct: 455 -----------------QKPAAYRPPHAKHAAAV 471
>7296500 [J] KOG2315 Predicted translation initiation factor related to
eIF-3a
Length = 638
Score = 179 bits (455), Expect = 8e-45
Identities = 134/461 (29%), Positives = 207/461 (44%), Gaps = 59/461 (12%)
Query: 48 GRFMAKSYESKVVLLIGE-----TWEITLVELPLKNVYDLKFSPSGNFLSTWERPLVDDT 102
GR+ A S +V +L +W + V LP + L+FSP G++L TWE +
Sbjct: 55 GRYFAYSNGQEVKVLQASRDSAASWPVICV-LPRPKAFYLQFSPRGSYLCTWEHYAITKD 113
Query: 103 EHLNCKIWNLNESPLSTEPKYSYKASTQSSWTLQFSKLDDYAIKSFGKELRIIKLSGEDT 162
+ E E ++ Q+ W +S + G E L GE
Sbjct: 114 RPEGSPNLLVYEVATGVE-VFAIVQKNQADWQPSWSADESIFALVVGGEALFYDL-GEGA 171
Query: 163 FKFDKPFATLT---PDQPFTTYQISPAEHPTICTF-TKEKSGKPAQLTIWPITTGKITKQ 218
+K FAT + + P P F T G P+ ++ +
Sbjct: 172 ---EKGFATTSRKIGGSRGGMLSLGPGNCPPFLAFYTPGAKGAPSMCKLYKYPALGQNQT 228
Query: 219 IVTKQFFKADSCHLKWSDLGNAILCLTTTDFDHSNKSYYGENNLYLLSFQGVNGALGGES 278
+ K FF+AD + W+ G+ +L LT+T+ D S SYYG ++ + A G++
Sbjct: 229 VACKSFFQADRVEMLWNKRGSGLLLLTSTEVDKSGASYYGNQAVHFM-------ATKGDT 281
Query: 279 VRVSLGKEGPIHDFNWSPTSRQFGVIYGFMPATITFFDLKGNAIHSLNEQRKNTLEFSPN 338
V L KEGP+H WSP + +F V+YGFMP+ ++LK + + E +N F+P
Sbjct: 282 CSVPLSKEGPVHCVKWSPKATEFVVVYGFMPSKAALYNLKCDVVFDFGEGPRNCAYFNPF 341
Query: 339 GKYILVGGFGNLQGSVDILDRHDKFRCISKFSATNTSVCKWSPGGEFILTATTSPRLRVD 398
G I + GFGNL G+V++ D K ++ +T+V +W P GE+ +TATT+PRLR+
Sbjct: 342 GNLIALAGFGNLPGAVEVWD-VSKREKLANLKCADTTVFEWHPNGEWFVTATTAPRLRIS 400
Query: 399 NGLKIWHYSGTLVFVKEY---KELLKVDWRTNCPFRIIKDGYVTNGNKLKDEELKQDPKI 455
NG K++HYSG L+ + +ELL ++W+ ++ +PKI
Sbjct: 401 NGFKVYHYSGALLHETMWPQGQELLGIEWQQFA------------------DKTFSEPKI 442
Query: 456 RKHQLEIHPVVTQFNLKNPNKSSTNLGAKKTTGAYKPPHAR 496
K + E KSS +KK AY PPH R
Sbjct: 443 TKAKHE------------GIKSSQPEASKK---AYTPPHLR 468
>Hs4503527 [J] KOG2314 Translation initiation factor 3 subunit b (eIF-3b)
Length = 873
Score = 79.7 bits (195), Expect = 1e-14
Identities = 102/465 (21%), Positives = 190/465 (39%), Gaps = 77/465 (16%)
Query: 45 SPCGRFMAKSYESKVVLLIGETWEITLVELPLKNVYDLKFSPSGNFLSTWERPLVDDTEH 104
SP G ++A ++ + L GE ++ + + V + FSP +L T+ PL+D +
Sbjct: 343 SPKGTYLATFHQRGIALWGGEKFK-QIQRFSHQGVQLIDFSPCERYLVTFS-PLMDTQDD 400
Query: 105 LNCKI-WNLNESPLSTEPKYSYKASTQSSWTL-------------QFSKLDDYAIKSFGK 150
I W++ L+ K + + + W + L Y S G
Sbjct: 401 PQAIIIWDI----LTGHKKRGFHCESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGL 456
Query: 151 -ELRIIKLSGEDTFKFDKPFATLTPDQPFTTYQISPAEHPTICTFTKEKSGKPAQLTIWP 209
+ + +K+SG F + SP + I + E PA++T+
Sbjct: 457 LDKKSLKISGIKDFSW------------------SPGGN-IIAFWVPEDKDIPARVTLMQ 497
Query: 210 ITTGKITKQIVTKQFFKADSCHLKWSDLGNAILCLTTTDFDHSNKSYYGENNLYLLSFQG 269
+ T ++I + F C L W G+ LC+ D + K G + +F+
Sbjct: 498 LPT---RQEIRVRNLFNVVDCKLHWQKNGD-YLCVKV---DRTPKGTQG----VVTNFEI 546
Query: 270 VNGALGGESVRVSLGKEGPIHDFNWSPTSRQFGVIYGFMPA-TITFFDLKGNA----IHS 324
V V KE I F W P +F V++G P +++F+ +K N I
Sbjct: 547 FRMREKQVPVDVVEMKE-TIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKM 605
Query: 325 LNEQRKNTLEFSPNGKYILVGGFGNLQGSVDILDRHDKFRCISKFSATN--TSVCKWSPG 382
++Q+ NT+ +SP G+++++ G ++ G++ +D D C A + S +W P
Sbjct: 606 FDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSD---CTVMNIAEHYMASDVEWDPT 662
Query: 383 GEFILTATTSPRLRVDNGLKIWHYSGTLVFVKEYKELLKVDWRTNCPFRIIKDGYVTNGN 442
G +++T+ + +VDN +W + G L+ ++ WR P
Sbjct: 663 GRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPP------------T 710
Query: 443 KLKDEELKQDPKIRKHQLEIHPVVTQFNLKNPNKSSTNLGAKKTT 487
L E++KQ I+K + + Q + + +K+S L ++ T
Sbjct: 711 LLSQEQIKQ---IKKDLKKYSKIFEQKDRLSQSKASKELVERRRT 752
>At5g27640 [J] KOG2314 Translation initiation factor 3 subunit b (eIF-3b)
Length = 738
Score = 76.3 bits (186), Expect = 1e-13
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 25/248 (10%)
Query: 194 FTKEKSG--KPAQLTIWPITTGKITKQIVTKQFFKADSCHLKWSDLGNAILCLTTTDFDH 251
F E+ G +PA++ + I + +Q K F C + W G L + +
Sbjct: 401 FVPEQGGGNQPAKVALVQIPSKVELRQ---KNLFSVSDCKMYWQSSGE-YLAVKVDRYTK 456
Query: 252 SNKSYYGENNLYLLSFQGVNGALGGESVRVSLGKEGPIHDFNWSPTSRQFGVIYGFMPAT 311
+ KS Y L+ + + + V K I F W P +F VI+G P
Sbjct: 457 TKKSTYSGFELFRIKERDIP-----IEVLELDNKNDKIIAFAWEPKGHRFAVIHGDQPRP 511
Query: 312 -ITFFDLKG-------NAIHSLNEQRKNTLEFSPNGKYILVGGFGNLQGSVDI--LDRHD 361
++F+ +K + + +L ++ N L +SP GKYI++ G G ++ +D +
Sbjct: 512 DVSFYSMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFFNVDELE 571
Query: 362 KFRCISKFSATNTSVCKWSPGGEFILTATTSPRLRVDNGLKIWHYSGTLVFVKEYKELLK 421
F AT+ +W P G ++ TA TS ++NG IW ++G +++ +
Sbjct: 572 TMATAEHFMATD---IEWDPTGRYVATAVTSVH-EMENGFTIWSFNGIMLYRILKDHFFQ 627
Query: 422 VDWRTNCP 429
+ WR P
Sbjct: 628 LAWRPRPP 635
>At5g25780 [J] KOG2314 Translation initiation factor 3 subunit b (eIF-3b)
Length = 730
Score = 74.3 bits (181), Expect = 5e-13
Identities = 58/244 (23%), Positives = 105/244 (42%), Gaps = 25/244 (10%)
Query: 194 FTKEKSG--KPAQLTIWPITTGKITKQIVTKQFFKADSCHLKWSDLGNAILCLTTTDFDH 251
F E+ G +PA++ + I + +Q K F C + W G L + +
Sbjct: 392 FVPEQGGGNQPAKVALVQIPSKVELRQ---KNLFSVSDCKMYWQSSGE-YLAVKVDRYTK 447
Query: 252 SNKSYYGENNLYLLSFQGVNGALGGESVRVSLGKEGPIHDFNWSPTSRQFGVIYGFMPAT 311
+ KS Y L+ + + + V K I F W P +F VI+G P
Sbjct: 448 TKKSTYSGFELFRIKERDIP-----IEVLELDNKNDKIIAFAWEPKGHRFAVIHGDQPRP 502
Query: 312 -ITFFDLKG-------NAIHSLNEQRKNTLEFSPNGKYILVGGFGNLQGSVDI--LDRHD 361
++F+ +K + + +L ++ N L +SP GKYI++ G G ++ +D +
Sbjct: 503 DVSFYSMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFFNVDELE 562
Query: 362 KFRCISKFSATNTSVCKWSPGGEFILTATTSPRLRVDNGLKIWHYSGTLVFVKEYKELLK 421
F AT+ +W P G ++ T+ T+ ++NG IW ++G +V+ +
Sbjct: 563 TMATAEHFMATD---IEWDPTGRYVATSVTTVH-EMENGFTIWSFNGNMVYRILKDHFFQ 618
Query: 422 VDWR 425
+ WR
Sbjct: 619 LAWR 622
>SPAC25G10.08 [J] KOG2314 Translation initiation factor 3 subunit b (eIF-3b)
Length = 725
Score = 68.6 bits (166), Expect = 3e-11
Identities = 94/460 (20%), Positives = 182/460 (39%), Gaps = 75/460 (16%)
Query: 45 SPCGRFMAKSYESKVVLLIGETWEITLVEL-PLKNVYDLKFSPSGNFLSTWE-------- 95
SP G ++ + + L GE+W + L P D FSP+ +L +W
Sbjct: 202 SPMGTYLVSLHLRGIQLWGGESWGMCARFLHPYVKFVD--FSPNEKYLVSWSYEPVRLPP 259
Query: 96 --------RPLVDDTEHLNCKIWN------LNESPLSTEPKYSYKASTQSSWTL-QFSKL 140
P DD E +C +W+ L + +P+ S K + W + ++S
Sbjct: 260 IGHPARETMPFTDDDEGKHCFVWDIASGRILRSFKIPPQPEGS-KDGKKVIWPIFKWSAD 318
Query: 141 DDYAIK-SFGKELRIIKLSGEDTFKFDKPFATLTPDQPFTTYQISPA-----EHPTICTF 194
D Y + + G+ + + + DK + Q F +S A + + +
Sbjct: 319 DKYLARVTVGQSISVYETPS--LALVDKKTIKIDGVQNFEWCPVSDALGRDSKEQLLAYW 376
Query: 195 TKEKSGKPAQLTIWPITTGKITKQIVTKQFFKADSCHLKWSDLGNAILCLTTTDFDHSNK 254
T E + +PA++ + I + I TK F C L W G+ LC+ + K
Sbjct: 377 TPEITNQPARVALISIPS---KSTIRTKNLFNVSDCKLYWQSNGD-YLCVKVDRHTKTKK 432
Query: 255 SYYGENNLYLLSFQGVNGALGGESVRVSLGKEGPIHDFNWSPTSRQFGVIYGF------- 307
S + ++ + + + V V + + + +F W P S +F +I
Sbjct: 433 STFSNLEIFRIREKNI-------PVEV-VDLKDVVLNFAWEPKSDRFAIISANDQVLNST 484
Query: 308 -MPATITF--FDLKGNA------IHSLNEQRKNTLEFSPNGKYILVGGFGN-LQGSVDIL 357
+ ++F F+ K N I + +++ N+L +P G++++ G+ Q ++
Sbjct: 485 NVKTNLSFYGFEQKKNTPSTFRHIITFDKKTCNSLFMAPKGRFMVAATLGSSTQYDLEFY 544
Query: 358 D--------RHDKFRCISKFSATN---TSVCKWSPGGEFILTATTSPRLRVDNGLKIWHY 406
D D + + + + +W P G ++ T++T R +++NG ++ +
Sbjct: 545 DLDFDTEKKEPDALANVQQIGSAEHFGMTELEWDPSGRYVTTSSTIWRHKLENGYRLCDF 604
Query: 407 SGTLVFVKEYKELLKVDWRTNCPFRIIKDGYVTNGNKLKD 446
GTL+ + E + WR P + K+ KLKD
Sbjct: 605 RGTLLREEMIGEFKQFIWRPRPPSPLTKEDMKKIRKKLKD 644
>ECU11g0670 [J] KOG2315 Predicted translation initiation factor related to
eIF-3a
Length = 496
Score = 66.2 bits (160), Expect = 1e-10
Identities = 73/325 (22%), Positives = 128/325 (38%), Gaps = 79/325 (24%)
Query: 253 NKSYYGENNLYLL-----SFQGVNGALGGESVRVSLGKEGPIHDFNWSPTSRQFGVIYGF 307
N SY+ E+ LYL SF+G+ P+H + + S F V +G
Sbjct: 235 NNSYFAESELYLYDTEKRSFKGLG--------------YSPVHSYTF--LSSGFAVCHGP 278
Query: 308 MPATITFFDLKGNAIHSLNEQRKNTLEFSPNGKYILVGGFGNLQGSVDILDRHDKFRCIS 367
P++++ L G ++ E +N + F+ + + GF NL G +++ + + ++
Sbjct: 279 QPSSVSVHGLDGKLRYNFPEGTRNRIFFNQHENIAVFAGFDNLSGDIEVFHVPSR-KLMA 337
Query: 368 KFSATNTSVCKWSPGGEFILTATTSPRLRVDNGLKIWHYSGTLVFVKEYKELLKVDWRTN 427
+F+ S+ W G + +TTS + DN + ++ Y G V +++K L
Sbjct: 338 RFNVLGASLVDWKESGSYFYVSTTS-YFQEDNKITLYDYYGRKVDERQFKSLFSA----- 391
Query: 428 CPFRIIKDGYVTNGNKLKDEELKQDPK--IRKHQLEIHPVVTQFNLKNPNKSSTNLGAKK 485
C GY G + + EL++ K I K + + P + F K ++SS KK
Sbjct: 392 C-------GY---GEEERFVELEKPEKLTIEKQEKYVPPSIHTFVPKAVSRSSG--PRKK 439
Query: 486 TTGAYKPPHARKATVVPGTTKTRAXXXXXXXXXXXXAASQTSPEEKKIRSLLKKLRAIES 545
KP +R LL LR IE+
Sbjct: 440 EPVEQKPRRSRD-------------------------------------DLLNVLREIEA 462
Query: 546 LKVKQTEGVKLENTQVTKIQSEPKI 570
LK + G +L ++ I EP++
Sbjct: 463 LKDRMRSGEELSVKELNLILKEPRL 487
>7302767 [J] KOG2314 Translation initiation factor 3 subunit b (eIF-3b)
Length = 690
Score = 62.4 bits (150), Expect = 2e-09
Identities = 83/438 (18%), Positives = 175/438 (39%), Gaps = 78/438 (17%)
Query: 45 SPCGRFMAKSYESKVVLLIGETWEITLVELPLKNVYDLKFSPSGNFLSTWERPLVDDTEH 104
SP G ++ ++ V + G +++ + + P ++FSP N+L T+ P +
Sbjct: 219 SPLGTYVVTFHKPGVAIWGGSSFQ-KIQKFPHPGTQFVEFSPCENYLVTYG-PTPTGQKI 276
Query: 105 LNCKIWNLNESPLSTEPKYSYKASTQSSWTLQFSKLDDYAIKSFGK-------------- 150
+ IW++ K S+ A S ++ DD + G+
Sbjct: 277 I---IWDIRTGA----EKRSFVADGMSVLSMFRWSHDDKFVARMGENSIHIYETPSFYLL 329
Query: 151 ELRIIKLSGEDTFKFDKPFATLTPDQPFTTYQISPAEHPTICTFTKEKSGKPAQLTIWPI 210
+L+ IK+ G F + SP ++ I + +E++ PA++T+ I
Sbjct: 330 DLKSIKIPGIRGFSW------------------SPTDN-VIAYWVEEQNQIPARVTLMEI 370
Query: 211 TTGKITKQIVTKQFFKADSCHLKWSDLGNAILCLTTTDFDHSNKSYYGENNLYLLSFQGV 270
++I K F C L W G+ LC+ + K + +L F
Sbjct: 371 PK---KREIRNKNLFHVADCKLHWQKSGD-YLCVKVDRYSKLKKDKKDLDVKFLGMFYNF 426
Query: 271 NGALGGESVRVSLGKEGPIHD---------FNWSPTSRQFGVIYGFMPAT-ITFFDL--- 317
+ KE P+ F W P +F +I+G ++ ++F+++
Sbjct: 427 E-------IFHMREKEIPVDSVEIRELILAFAWEPVGNKFSIIHGETNSSNVSFYEVNKG 479
Query: 318 -KGNAIHSLNEQRKNTLEFSPNGKYILVGGFGNLQGSVDILDRHDKFRCISKFSATNTSV 376
K + + L ++ L +SP G++I++ G+ + +D + + + S
Sbjct: 480 VKPSLVKRLEKKSCTHLFWSPRGQFIVMANL--TMGTFEFVDSTNDYIITASPDHFRASE 537
Query: 377 CKWSPGGEFILTATTSPRLRVDNGLKIWHYSGTLVFVKEYKELLKVDWRTNCPFRIIKDG 436
+W P G +++T +S +++ D G ++ + G ++ K ++ WR P + ++
Sbjct: 538 VEWDPTGRYVVTGVSSWKVKEDTGFNMYTFQGRIIKRTILKNFVQFLWRPRPPTLLSEE- 596
Query: 437 YVTNGNKLKDEELKQDPK 454
K +E+K++ K
Sbjct: 597 --------KQKEIKKNLK 606
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,047,708
Number of Sequences: 60738
Number of extensions: 1633356
Number of successful extensions: 4222
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4164
Number of HSP's gapped (non-prelim): 17
length of query: 585
length of database: 30,389,216
effective HSP length: 112
effective length of query: 473
effective length of database: 23,586,560
effective search space: 11156442880
effective search space used: 11156442880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)