ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI0804 check: MH L KOG0390 Replication, recombination and repair DNA repair protein, SNF2 family
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI0804 274203 271519 -895
(895 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL163c [L] KOG0390 DNA repair protein SNF2 family 1185 0.0
SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family 801 0.0
Hs4506397 [L] KOG0390 DNA repair protein SNF2 family 575 e-163
CE25143 [L] KOG0390 DNA repair protein SNF2 family 531 e-150
7295868 [L] KOG0390 DNA repair protein SNF2 family 500 e-141
At3g19210 [L] KOG0390 DNA repair protein SNF2 family 441 e-123
Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family 422 e-117
YBR073w [L] KOG0390 DNA repair protein SNF2 family 359 1e-98
SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family 312 1e-84
CE23323 [L] KOG0390 DNA repair protein SNF2 family 290 7e-78
At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/... 273 1e-72
Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/... 270 6e-72
ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB... 270 7e-72
SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein C... 265 3e-70
YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 261 3e-69
At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box ... 250 8e-66
At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 246 1e-64
Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 241 5e-63
At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 240 8e-63
CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein 234 3e-61
At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/... 233 8e-61
YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 231 4e-60
YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 230 6e-60
Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein 228 4e-59
At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein 227 5e-59
Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 224 4e-58
Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 224 4e-58
At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-co... 224 5e-58
CE17716 [R] KOG0383 Predicted helicase 224 6e-58
7293795 [R] KOG0383 Predicted helicase 223 8e-58
YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein 223 1e-57
Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein 221 4e-57
Hs4557453 [R] KOG0383 Predicted helicase 221 5e-57
CE03657 [R] KOG0383 Predicted helicase 220 7e-57
At2g25170 [R] KOG0383 Predicted helicase 220 7e-57
7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 219 1e-56
Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 219 1e-56
Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 219 2e-56
Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 219 2e-56
YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 218 3e-56
Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein 218 3e-56
Hs20533808 [R] KOG0383 Predicted helicase 218 3e-56
CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 218 3e-56
SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein 217 6e-56
YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 216 1e-55
Hs4557451 [R] KOG0383 Predicted helicase 216 2e-55
Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein 216 2e-55
CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 215 3e-55
SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF co... 214 4e-55
7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 214 5e-55
YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 214 6e-55
Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 213 1e-54
7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein 213 1e-54
CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 212 2e-54
7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 209 1e-53
ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein 209 2e-53
At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 209 2e-53
Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein 207 6e-53
SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain... 206 1e-52
SPBP35G2.10 [R] KOG0383 Predicted helicase 205 2e-52
Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase 205 2e-52
At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 205 3e-52
SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein 204 5e-52
CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein 203 1e-51
YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase 202 2e-51
At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/... 201 4e-51
At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 200 9e-51
Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 199 2e-50
YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 198 3e-50
At5g44800 [R] KOG0383 Predicted helicase 196 2e-49
At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 194 5e-49
Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 194 7e-49
ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 192 2e-48
SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase 183 9e-46
CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 183 1e-45
CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase 181 3e-45
SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase 180 8e-45
At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 178 3e-44
Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 175 2e-43
7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase 173 9e-43
ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 172 2e-42
At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase 171 5e-42
At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 171 6e-42
SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase 169 2e-41
CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 164 7e-40
7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 161 5e-39
At1g05480 [L] KOG0390 DNA repair protein SNF2 family 157 9e-38
SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF... 153 1e-36
Hs19923174 [KL] KOG4439 RNA polymerase II transcription terminat... 149 1e-35
7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 147 5e-35
CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 146 2e-34
At3g24340 [L] KOG0390 DNA repair protein SNF2 family 145 2e-34
Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 144 5e-34
Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 144 5e-34
Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 144 5e-34
7298963 [KL] KOG4439 RNA polymerase II transcription termination... 142 2e-33
At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16 135 3e-31
At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase 130 7e-30
CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase 130 9e-30
Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 126 1e-28
HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 126 2e-28
At4g31900 [R] KOG0383 Predicted helicase 125 2e-28
At3g42670 [L] KOG0390 DNA repair protein SNF2 family 124 5e-28
CE11083 [KL] KOG4439 RNA polymerase II transcription termination... 122 2e-27
At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase 122 2e-27
At2g21450 [L] KOG0390 DNA repair protein SNF2 family 122 2e-27
At5g20420 [L] KOG0390 DNA repair protein SNF2 family 122 3e-27
At2g16390 [L] KOG0390 DNA repair protein SNF2 family 119 2e-26
YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase 116 2e-25
CE14110 [KL] KOG4439 RNA polymerase II transcription termination... 115 3e-25
YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase 115 4e-25
HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein 114 5e-25
Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase 114 5e-25
At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 113 1e-24
Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein 112 2e-24
CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 112 3e-24
ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase 111 6e-24
At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 110 1e-23
At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 105 4e-22
Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/... 104 7e-22
7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein 103 1e-21
At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 101 4e-21
CE11450 [KL] KOG4439 RNA polymerase II transcription termination... 101 6e-21
SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF... 100 8e-21
ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 95 5e-19
7298962 [KL] KOG4439 RNA polymerase II transcription termination... 94 9e-19
At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 90 1e-17
At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 89 4e-17
Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase 86 2e-16
At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16 86 2e-16
YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 86 3e-16
SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16 86 3e-16
YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16 85 4e-16
SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF... 84 1e-15
7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase 84 1e-15
At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 82 3e-15
At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcri... 82 4e-15
YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 82 5e-15
SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase 82 5e-15
At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 80 2e-14
7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 76 3e-13
Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 75 3e-13
SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF c... 75 5e-13
At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 72 4e-12
7295362 [L] KOG0298 DEAD box-containing helicase-like transcript... 72 4e-12
Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 71 9e-12
At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 69 2e-11
SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLT... 67 1e-10
YLR247c [L] KOG0298 DEAD box-containing helicase-like transcript... 62 5e-09
SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcr... 62 5e-09
Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcr... 56 2e-07
Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 52 3e-06
7293730 [R] KOG0383 Predicted helicase 52 4e-06
CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 52 5e-06
CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 52 5e-06
>YGL163c [L] KOG0390 DNA repair protein SNF2 family
Length = 898
Score = 1185 bits (3066), Expect = 0.0
Identities = 613/924 (66%), Positives = 720/924 (77%), Gaps = 55/924 (5%)
Query: 1 MARRRLPDRPPNGIGAGARPNLRPRRLDTNQALETLTKPFKVPFKVNK---------TDH 51
MARRRLPDRPPNGIGAG RP L PR ++ ++ LTKPF+VP+K T
Sbjct: 1 MARRRLPDRPPNGIGAGERPRLVPRPINVQDSVNRLTKPFRVPYKNTHIPPAAGRIATGS 60
Query: 52 AKRYGVRSSRRSQTT--YANMDSSLD-----------SDLHVKRKDALSLSRLNAEPSRL 98
G RS R+ T Y+ +D + D S L +RKDALS RL +P+RL
Sbjct: 61 DNIVGGRSLRKRSATVCYSGLDINADEAEYNSQDISFSQLTKRRKDALSAQRLAKDPTRL 120
Query: 99 DTIYSTLRRSFTVPIKGYVPRHNIPMALGTKAKVVIPPRPLHDPTDELAIVLYDPTVDGD 158
I TLRRSFTVPIKGYV RH++P+ LG K K+ PRPLHDPTDE AIVLYDP+VDG+
Sbjct: 121 SHIQYTLRRSFTVPIKGYVQRHSLPLTLGMKKKITPEPRPLHDPTDEFAIVLYDPSVDGE 180
Query: 159 IPEQHEDLESFRQNAVDTKKSQKGKDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNKTL 218
+ +++ + + KS + KD+ ++++ ++E P HP +++NGV+NK L
Sbjct: 181 MIVHDTSMDNKEEESKKMIKSTQEKDNINKEKNSQEERPTQRIG-RHPALMTNGVRNKPL 239
Query: 219 KELLGSSEDNTS--KKFPNVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDAKT 276
+ELLG SE++ KKF +VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKD+L+A+
Sbjct: 240 RELLGDSENSAENKKKFASVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEA 299
Query: 277 VLDSSSQSMEKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGL 336
T S+ P+++D +L + K +N NRGAYGCIMADEMGL
Sbjct: 300 FN------------------TSSEDPLKSDEKALTESQKTEQN--NRGAYGCIMADEMGL 339
Query: 337 GKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGK 396
GKTLQC+ALMWT+L+QGPQG+R IDKCIIVCPSSLVNNWANE+ KWLGP +L+ LA+DGK
Sbjct: 340 GKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGK 399
Query: 397 KSSLNNGN--VADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEGHR 454
KSS+ GN V+ ++ WA AQGRNIVKPVLIISY+TLRRNV+QLKNC VGLMLADEGHR
Sbjct: 400 KSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHR 459
Query: 455 LKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELP 514
LKN DSLTFTALDSI CPRRVILSGTPIQNDLSEYFALL+FSNPGLLGSR +FRKNFE P
Sbjct: 460 LKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENP 519
Query: 515 ILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQ 574
IL+ RD+ ATD+E+T G+ +L++LS IVSKFIIRRTN+ILAKYLPCKYEHVIF+NL P Q
Sbjct: 520 ILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQ 579
Query: 575 QSLYQHFIESRAVKKIVKG-DSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEEL-IPDDY 632
LY I+SR VKK+VKG +QPL+AIG+LKKLCNHP+LL ++ ++L +PDDY
Sbjct: 580 NELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLLNFEDEFDDEDDLELPDDY 639
Query: 633 QSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFS 692
S+ R V QT +S+KFS+L RFL+KIKTES+DKIVLISNYTQTLDLIEKMC
Sbjct: 640 NMP----GSKARDV-QTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRY 694
Query: 693 NHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDW 752
HY +RLDGTM+INKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLIL+DPDW
Sbjct: 695 KHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDW 754
Query: 753 NPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERL 812
NPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD KEDVERL
Sbjct: 755 NPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDAKEDVERL 814
Query: 813 FSSDNLKQLFKLDTKTICDTHETYNCKRCK-NGKQILKAPVMLYGDATSWNHLNHDALAK 871
FSSDNL+QLF+ + TIC+THETY+CKRC GKQ+ +AP MLYGDAT+WNHLNHDAL K
Sbjct: 815 FSSDNLRQLFQKNENTICETHETYHCKRCNAQGKQLKRAPAMLYGDATTWNHLNHDALEK 874
Query: 872 TNDHLLKNEFNHKDISFAFQYISH 895
TNDHLLKNE ++ DISFAFQYISH
Sbjct: 875 TNDHLLKNEHHYNDISFAFQYISH 898
>SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 852
Score = 801 bits (2069), Expect = 0.0
Identities = 451/908 (49%), Positives = 575/908 (62%), Gaps = 90/908 (9%)
Query: 19 RPNLRPRRLDTNQALET------------LTKPFKVPFKVNKTDHAKRYGVRSSRRSQTT 66
+P R+ T+ L T L K FK P V + + R + +
Sbjct: 4 QPTTAKPRISTSSKLNTVLSKNKENVPGKLFKKFKCPSLVISEKRKELPLRKKPRVNYSE 63
Query: 67 YANMDSSLDSDL---------HVKRKDALSLSRLNAEPSRLDTIYSTLRRSFTVP--IKG 115
Y ++D DS +K + L L+ +PS + +++ F+VP IKG
Sbjct: 64 YGSVDGKYDSAYVSENVSGLATIKEANRLILNHERRDPS------TVIKKQFSVPKPIKG 117
Query: 116 Y-----VPRHNIPMALGTKAKVVIPPRPLHDPTDELAIVLYDPTVDGD--IPEQHEDLES 168
+ + H P LG K KV PRPL+DP DE AIVLYDPT D D IP+ E L
Sbjct: 118 HEDISKLCAHRPPPTLGMKRKVDFIPRPLYDPADEFAIVLYDPTTDADEIIPDIKEVLAE 177
Query: 169 FRQNAVDTKKSQKGKDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNKTLKELLGSSEDN 228
R+ + K++KGK KE S + S H + ++ V + + ++ L +S N
Sbjct: 178 KRKKD-ELLKNRKGK---------KEISDSEPESDHDSCVSTDTVASCSTEQSLITS--N 225
Query: 229 TSKKFPNVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQSMEKA 288
TSK RP++ +KD L +
Sbjct: 226 TSKH---------------RRPNKS--------------LKDLLG----IQKEKPPPPPV 252
Query: 289 DTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWT 348
D + P + + +K + K +R A GCIMADEMGLGKTLQC+AL+WT
Sbjct: 253 AVVIDPKLARILRPHQ--IEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWT 310
Query: 349 MLKQGPQ-GRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVAD 407
+LKQ PQ G+ +I+K II CPSSLV NWANE+ KWLG +++ +DGK S +
Sbjct: 311 LLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQE---LIM 367
Query: 408 SVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALD 467
++ WAS GR + +PVLI SY+TLR VE L N E+G++L DEGHRLKN+DSLTFTALD
Sbjct: 368 ALQQWASVHGRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALD 427
Query: 468 SIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEE 527
+ RRVILSGTPIQNDLSEYF+LLNF+NPGLLGSR +FRKN+E+PIL+ RD+ T+++
Sbjct: 428 KLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKD 487
Query: 528 VTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAV 587
G +L +L+ IV++FIIRRTN+IL+KYLP KYEHV+F NL+ FQ SLY+HFI S +
Sbjct: 488 KENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEI 547
Query: 588 KKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVI 647
KI++G +QPLKAIGLLKK+CNHPDLL L+ED+ G E L P + RN I
Sbjct: 548 NKILRGTGSQPLKAIGLLKKICNHPDLLNLTEDLEGCEALFPPGFIPRELRGRDRN---I 604
Query: 648 QTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNIN 707
++ S K VL R LY+IK E++DKIVLISNYT TLDL E++C + Y LRLDGTMN+N
Sbjct: 605 DSSLSGKMLVLERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVN 664
Query: 708 KRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRD 767
KRQ+LVD FNDPE F+FLLSSKAGGCGINLIGANRLIL DPDWNPAADQQALARVWRD
Sbjct: 665 KRQRLVDTFNDPEKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRD 724
Query: 768 GQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTK 827
GQKKDCF+YRFI+TGTIEEKIFQRQS K SLSSCVVDE +DVER FS DNL+QLF+L+
Sbjct: 725 GQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERHFSLDNLRQLFQLNDH 784
Query: 828 TICDTHETYNCKRCKNGKQILKAPVMLYGDATSWNHLNHDALAKTNDHLLKNEFNHKDIS 887
T+C+THETY CKRC++GKQ ++AP MLYGD ++WNH + L + DHLLK E + +S
Sbjct: 785 TVCETHETYKCKRCRDGKQFIRAPAMLYGDTSTWNHFTNPTLDRIEDHLLKREAGKQQVS 844
Query: 888 FAFQYISH 895
FQY SH
Sbjct: 845 TVFQYKSH 852
>Hs4506397 [L] KOG0390 DNA repair protein SNF2 family
Length = 747
Score = 575 bits (1481), Expect = e-163
Identities = 304/642 (47%), Positives = 416/642 (64%), Gaps = 79/642 (12%)
Query: 231 KKFPNVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQSMEKADT 290
+K P V VV+DP L+K+LRPHQ EGV+FL+ C
Sbjct: 137 EKLP-VHVVVDPILSKVLRPHQREGVKFLWEC---------------------------- 167
Query: 291 QADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTML 350
+T + P G++GCIMADEMGLGKTLQC+ LMWT+L
Sbjct: 168 -----VTSRRIP---------------------GSHGCIMADEMGLGKTLQCITLMWTLL 201
Query: 351 KQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVS 410
+Q P+ + IDK ++V PSSLV NW NE+ KWLG G + LAIDG + +
Sbjct: 202 RQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLG-GRIQPLAIDGGSKD----EIDQKLE 256
Query: 411 HWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIR 470
+ + +G + P+LIISY+T R +V L+ VGL++ DEGHRLKN+++ T+ ALDS+
Sbjct: 257 GFMNQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLN 316
Query: 471 CPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTL 530
RRV++SGTPIQNDL EYF+L++F N G+LG+ ++F+K+FELPIL+ RD+ A++ + L
Sbjct: 317 TSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQL 376
Query: 531 GKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFI-ESRAVKK 589
G++RLR+L++IV++ +IRRT++IL+KYLP K E V+ LTP Q LY+ F+ +++ ++
Sbjct: 377 GEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEE 436
Query: 590 IVKGD-SNQPLKAIGLLKKLCNHPDLL-----ELSEDIPGSEELIPDDYQSSVDSRTSRN 643
+++G S L +I LKKLCNHP L+ E + G+ +L P Y S
Sbjct: 437 LLEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFVGALDLFPPGYSSKA------- 489
Query: 644 RSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGT 703
++ S K VL L ++ S+DK+VL+SNYTQTLDL EK+C + Y +RLDGT
Sbjct: 490 ---LEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGT 546
Query: 704 MNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALAR 763
M+I KR K+V+RFN P +F+F+LSSKAGGCG+NLIGANRL++ DPDWNPA D+QA+AR
Sbjct: 547 MSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR 606
Query: 764 VWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFK 823
VWRDGQKK C+IYR +S GTIEEKIFQRQS K +LSSCVVDE++DVER FS LK+LF
Sbjct: 607 VWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFI 666
Query: 824 LDTKTICDTHETYNCKRCKNGKQILKAP--VMLYGDATSWNH 863
LD ++ DTH+ +C+RC N +QI P D WNH
Sbjct: 667 LDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSDLAGWNH 708
>CE25143 [L] KOG0390 DNA repair protein SNF2 family
Length = 818
Score = 531 bits (1369), Expect = e-150
Identities = 298/672 (44%), Positives = 402/672 (59%), Gaps = 83/672 (12%)
Query: 236 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQSMEKADTQADSN 295
V VV DP + KILRPHQ +GV+F++ C
Sbjct: 190 VHVVADPVVGKILRPHQRDGVKFMWDC--------------------------------- 216
Query: 296 ITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQ 355
+TG P +GCIMADEMGLGKTLQC++L+WT+L+Q P
Sbjct: 217 VTGINIPE---------------------FHGCIMADEMGLGKTLQCISLLWTLLRQSPD 255
Query: 356 GRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAID-GKKSSLNNGNVADSVSHWAS 414
++ K IIVCPSSLV NW EI KWLG L+++ +D GK+ + +A S A
Sbjct: 256 ACPTVSKSIIVCPSSLVKNWDKEIKKWLGT-RLNAMPVDSGKREQI----IACLNSFMAD 310
Query: 415 AQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRR 474
++ R + PVLIISY+T R L + +VG+++ DEGHRLKN+++LT+ AL ++C RR
Sbjct: 311 SKMRCAI-PVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSENLTYQALSGLKCARR 369
Query: 475 VILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDR 534
V++SGTPIQNDL EYF+L+NF NPGLLG+ ++FRK FE IL+ RD+ A+ E+ G+++
Sbjct: 370 VLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADASSEDQKKGEEK 429
Query: 535 LRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGD 594
+++ ++V K IIRRT+ +L KYLP KYEH+I + Q++LY IE +IV+ D
Sbjct: 430 TKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKLIECEKQNRIVEKD 489
Query: 595 SNQPLKAIGL---LKKLCNHPDLLELSEDIPGSE------ELIPDDYQSSVDSRTSRNRS 645
A+ LKKLCNHP L+ P + + P+ + N
Sbjct: 490 KGATASALSFITHLKKLCNHPYLVYDEFQKPDNRFRNKCLSIFPESF----------NPK 539
Query: 646 VIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMN 705
+FS K VL L + ++DK VL+SNYTQT+D ++C Y +RLDG+M+
Sbjct: 540 SFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMELCKLRGYDFVRLDGSMS 599
Query: 706 INKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVW 765
I +R K+VD FNDP F FLLSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVW
Sbjct: 600 IKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 659
Query: 766 RDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLD 825
RDGQKK CFIYR ++TG+IEEK+FQRQ+ K +LSSCVVD EDV R FSS+ L++LFKL+
Sbjct: 660 RDGQKKMCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGEDVARHFSSEQLRELFKLE 719
Query: 826 TKTICDTHETYNCKRCKNGKQILKAPVM--LYGDATSWNHLNHDALAKTNDHLLKNEFNH 883
+ DTHE CKRC G + + P D ++W H A K D++L+ F
Sbjct: 720 STVASDTHEKLKCKRCIQGVESVDPPTNADCASDLSNWFHSQKSA-RKVADNVLRAVFEC 778
Query: 884 KDISFAFQYISH 895
ISF F SH
Sbjct: 779 GSISFVFHQKSH 790
>7295868 [L] KOG0390 DNA repair protein SNF2 family
Length = 784
Score = 500 bits (1287), Expect = e-141
Identities = 271/582 (46%), Positives = 374/582 (63%), Gaps = 34/582 (5%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPG 386
GCIMADEMGLGKTLQC+ L+WT+L+QGP+ + +I+K I+V PSSLV NW E KWL G
Sbjct: 180 GCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLH-G 238
Query: 387 SLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGL 446
L L ++G N ++ ++ R + PVL+ISY+T R E L EVG+
Sbjct: 239 RLLCLPMEGGTKE----NTIRALEQFSMTSAR-LGTPVLLISYETFRIYAEILCKYEVGM 293
Query: 447 MLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRND 506
++ DEGHRLKN+D+LT+ AL ++ RRV+LSGTPIQNDL+EY++L+NF NP +LG+
Sbjct: 294 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAV 353
Query: 507 FRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVI 566
F++NFE IL+ +++ +T++E ++ ++L +V + IIRRTN IL KYLP K+E VI
Sbjct: 354 FKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVI 413
Query: 567 FINLTPFQQSLYQHFIESRAVKKIVKGDSNQP-----LKAIGLLKKLCNHPDLL-----E 616
LT Q LY +F++S V++ + D N+ L I LKK+C+HPDL+
Sbjct: 414 CAKLTAIQLELYTNFLKSDQVRRSL-ADCNEKASLTALADITTLKKICSHPDLIYEKLTA 472
Query: 617 LSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLI 676
+ S+ ++P +Y+ + S KF +L L I+ E NDK+VLI
Sbjct: 473 REKGFENSQNVLPSNYKPKD----------LNPELSGKFMLLDFMLAAIRAEGNDKVVLI 522
Query: 677 SNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCG 736
SNYTQTLDL E++ YG +RLDGTM+I KR K+VDRFNDPE F+F+LSSKAGGCG
Sbjct: 523 SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCG 582
Query: 737 INLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKM 796
+NLIGANRL + DPDWNPA D+QA+ARVWRDGQKK C+IYR +++G+IEEKI QRQ+ K
Sbjct: 583 LNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKK 642
Query: 797 SLSSCVVDEKEDVERLFSSDNLKQLFKLDTKTICDTHETYNCKRCKNGKQILKAPVMLYG 856
SLSS ++D E E+ F+ D+LK LF D + DTH+ CKRC Q+ P
Sbjct: 643 SLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDT-- 700
Query: 857 DATS----WNHLNHDALAKTNDHLLKNEFNHKDISFAFQYIS 894
D TS W H +++ ++ L + + K +SF F + S
Sbjct: 701 DCTSHLSQWYHCSNNR-GLPDNILAQAWMDCKCVSFVFHHRS 741
>At3g19210 [L] KOG0390 DNA repair protein SNF2 family
Length = 688
Score = 441 bits (1133), Expect = e-123
Identities = 273/697 (39%), Positives = 379/697 (54%), Gaps = 103/697 (14%)
Query: 175 DTKKSQKGKDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNKTLKELLGSSEDNTSKKFP 234
D S +SQD + + +P K+K +K+LL +
Sbjct: 13 DCDDSSDSYKDDSQDSEGENDNPECEDLAVVSLSSDADRKSKNVKDLLSNV--------- 63
Query: 235 NVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQSMEKADTQADS 294
+++ L K LRPHQ EGV+F++ CV+GL +
Sbjct: 64 -TTIMVHSVLVKFLRPHQREGVQFMFDCVSGL------------------------HGSA 98
Query: 295 NITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGP 354
NI G CI+AD+MGLGKTLQ + L++T+L QG
Sbjct: 99 NING-----------------------------CILADDMGLGKTLQSITLLYTLLCQGF 129
Query: 355 QGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWAS 414
G + K IIV P+SLV+NW EI KW+G + + + +G DS + S
Sbjct: 130 DGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSG--IDSFTRPRS 187
Query: 415 AQGRNIVKPVLIISYDTLRRNVE---QLKNCEVGLMLADEGHRLKNADSLTFTALDSIRC 471
A VLIISY+T R + Q ++C+ L++ DE HRLKN +LT AL S+ C
Sbjct: 188 AL------QVLIISYETFRMHSSKFCQSESCD--LLICDEAHRLKNDQTLTNRALASLTC 239
Query: 472 PRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLG 531
RRV+LSGTP+QNDL E+FA++NF+NPG LG FR +E PI+ R+ AT+EE L
Sbjct: 240 KRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLA 299
Query: 532 KDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIV 591
DR +LS+ V++FI+RRTN +L+ +LP K V+ +T Q +LY HFI S+ +K+ +
Sbjct: 300 ADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRAL 359
Query: 592 KGDSNQP--LKAIGLLKKLCNHPDLL--ELSEDIPGSE------ELIPDD-YQSSVDSRT 640
++ Q L I LKKLCNHP L+ + PG+ E P + + + T
Sbjct: 360 ADNAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWT 419
Query: 641 SRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRL 700
+ + ++ S K VL+R L ++ +++D+IVL+SNYTQTLDL ++C Y LRL
Sbjct: 420 GGDGAWVE--LSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRL 477
Query: 701 DGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQA 760
DG+ I+KRQKLV+R NDP EF FLLSSKAGGCG+NLIGANRL+L DPDWNPA D+QA
Sbjct: 478 DGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQA 537
Query: 761 LARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKED-------VERLF 813
ARVWRDGQKK ++YRF+STGTIEEK++QRQ K L + E+ D L+
Sbjct: 538 AARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQVLAGMLY 597
Query: 814 S-------SDNLKQLFKLDTKTICDTHETYNCKRCKN 843
+ S+ L Q + HE +C RC+N
Sbjct: 598 ASSINDTHSNGLSQSLFSGNVARSEIHEKMSCSRCQN 634
>Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family
Length = 808
Score = 422 bits (1085), Expect = e-117
Identities = 256/617 (41%), Positives = 351/617 (56%), Gaps = 70/617 (11%)
Query: 321 RNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRS-IDKCIIVCPSSLVNNWANEI 379
R G G I+ADEMGLGKTLQC++L+WT+ QGP G + I K +IV P SLVNNW E
Sbjct: 213 RMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEF 272
Query: 380 DKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQL 439
KWLG + +D H ++I VLIISY+ L R+++Q+
Sbjct: 273 QKWLGSERIKIFTVDQ--------------DHKVEEFIKSIFYSVLIISYEMLLRSLDQI 318
Query: 440 KNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPG 499
KN + L++ DEGHRLKN+ T TAL S+ C +R+IL+GTPIQNDL E+FAL++F NPG
Sbjct: 319 KNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPG 378
Query: 500 LLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLP 559
+LGS + +RK +E PI+ SR+ A++EE LG+ R +L+ + FI+RRT I+ KYLP
Sbjct: 379 ILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLP 438
Query: 560 CKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKG--DSNQPLKAIGLLKKLCNHPDLL-- 615
K E+V+F Q LY+ + S+ V+ ++G +++ L IG LKKLCNHP LL
Sbjct: 439 PKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENSPHLICIGALKKLCNHPCLLFN 498
Query: 616 -----ELSEDIPGSEE---------LIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARF 661
E S +EE + P DY N + S K VL++
Sbjct: 499 SIKEKECSSTCDKNEEKSLYKGLLSVFPADY----------NPLLFTEKESGKLQVLSKL 548
Query: 662 LYKI-KTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPE 720
L I + +K+VL+SNYTQTL++++++C + Y RLDG I++RQ++VD FN
Sbjct: 549 LAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQH 608
Query: 721 GQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFIS 780
FIFLLSSKAGG G+NLIG + LIL D DWNPA D QA++RVWRDGQK IYR ++
Sbjct: 609 SSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLT 668
Query: 781 TGTIEEKIFQRQSMKMSLSSCVVDEKEDVERL-FSSDNLKQLFKLDTKTICDTHETYNC- 838
TGTIEEKI+QRQ K L VVD + E + FS + LK LF L + C TH+ +C
Sbjct: 669 TGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDCE 728
Query: 839 ------------------KRCKNGKQILKA---PVMLYGDATSWNHLNHDALAKTNDHLL 877
+ C+ G K+ + W H + D L T+ L
Sbjct: 729 CTGEEVHTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFL- 787
Query: 878 KNEFNHKDISFAFQYIS 894
E +++SF FQ I+
Sbjct: 788 --ERITENVSFIFQNIT 802
>YBR073w [L] KOG0390 DNA repair protein SNF2 family
Length = 958
Score = 359 bits (921), Expect = 1e-98
Identities = 274/856 (32%), Positives = 417/856 (48%), Gaps = 124/856 (14%)
Query: 14 IGAGARPNL--RPRRLDTNQALETLTKPFKVPFKVNKTDHAKRYGVRSSRRSQTTYANMD 71
I AG NL +P L +N+ T+ F + ++ T K + S YA +
Sbjct: 84 ISAGPTLNLAKKPNNLSSNEN----TRYFTIMYRKPTTKKHKTW-------SGDGYATLK 132
Query: 72 SSLDSDLHVKRKDALSLSRLNAEPSRLDTIYSTLRRSFTVPIK-GYVPRHNIPMALGTKA 130
+S SD +A + PS D+++ TL ++ + ++ Y + N + +A
Sbjct: 133 AS--SDKLCFYNEAGKFLGSSMLPSDSDSLFETLFKAGSNEVQLDYELKENAEIRSAKEA 190
Query: 131 KVVIPPRPLHDPTDELAIVLYDPTVDGDIPEQHEDLES-FRQNAVDTKKSQKGKDSESQD 189
P T V P+ D + L F N V KS + +E
Sbjct: 191 LSQNMGNPSPPTTSTTETV---PSTKNDGGKYQMPLSQLFSLNTVKRFKSVTKQTNEHMT 247
Query: 190 QKAKESSPNSAPSIHHPKMLSNGVKNKTLKELLGSSEDNTSKKFPNVPVVIDPKLAKILR 249
K +S NS ++P N + N + ++E V V++DP L K LR
Sbjct: 248 TVPK-TSQNSKAKKYYPVFDVNKIDNPIVMNKNAAAE---------VDVIVDPLLGKFLR 297
Query: 250 PHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQSMEKADTQADSNITGSKSPVETDVSS 309
PHQ EGV+F+Y C+ GL + + S +E ++D+S
Sbjct: 298 PHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLEN----------------DSDIS- 340
Query: 310 LKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRS---------- 359
GC++AD+MGLGKTL + L+WT+++Q P +
Sbjct: 341 -----------------GCLLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLT 383
Query: 360 --IDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKS-SLNNGNVADSVSHWASAQ 416
K ++VCP +L+ NW E KWL + L + + S ++ V + + + Q
Sbjct: 384 GLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQ 443
Query: 417 GRNIVKPVLIISYDTLRRNVEQLKNCE--VGLMLADEGHRLKNADSLTFTALDSIRCPRR 474
VLII Y+ L E+L+ + + +++ DEGHRLKN S L S+ R+
Sbjct: 444 -------VLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRK 496
Query: 475 VILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTL--GK 532
++L+GTPIQNDL+E+F +++F NPG+LGS F++ F +PI ++RD+ E L G+
Sbjct: 497 LLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGE 556
Query: 533 DRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVK 592
+R +++ I +FI+RRTN IL KYLP K + ++F P+ Q + A K I++
Sbjct: 557 ERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCK--PYSQQIL-------AFKDILQ 607
Query: 593 GDS--------NQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNR 644
G + L I LLKK+CN P L+ GS D Y S T
Sbjct: 608 GARLDFGQLTFSSSLGLITLLKKVCNSPGLV-------GS-----DPYYKSHIKDTQSQD 655
Query: 645 SVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTM 704
S ++ S K VL L I+ + +K+V++SNYTQTLD+IE + RLDG++
Sbjct: 656 SYSRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSI 715
Query: 705 NINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARV 764
+R +V FN F FLLS+K+GG G+NL+G +RLIL D DWNP+ D QA++R+
Sbjct: 716 PAKQRDSIVTSFNRNPAI-FGFLLSAKSGGVGLNLVGRSRLILFDNDWNPSVDLQAMSRI 774
Query: 765 WRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKE------DVERLFSSDNL 818
RDGQKK CFIYR ++TG I+EKI QRQ MK SLS + + E + LF+ ++L
Sbjct: 775 HRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDL 834
Query: 819 KQLFKLDTKTICDTHE 834
K LF + T T +TH+
Sbjct: 835 KDLFSVHTDTKSNTHD 850
>SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 768
Score = 312 bits (800), Expect = 1e-84
Identities = 189/514 (36%), Positives = 288/514 (55%), Gaps = 33/514 (6%)
Query: 326 YGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRS--IDKCIIVCPSSLVNNWANEIDKWL 383
Y I+ADEMGLGKTLQ + ++WT+LKQ RS I+ ++V P +L+ NW NE WL
Sbjct: 186 YSAILADEMGLGKTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWL 245
Query: 384 GPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLK-NC 442
G ++ + A+ + S N ++I Y+T+ +
Sbjct: 246 GH----------ERIHVYIARCAEDFQEFTS----NKTYSIIITGYETVCTYLRNYGCGI 291
Query: 443 EVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLG 502
++ L++ DE HRLK+ S T+ L+ ++ +R++L+GTP+QNDLSEYF+++NF PG LG
Sbjct: 292 DIDLLICDEAHRLKSMSSQTWITLNKLKTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLG 351
Query: 503 SRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKY 562
+ N F+ +E PIL+SR A+ +++LG RL++L S F +RR NILAK+LP +
Sbjct: 352 TPNSFKAQYERPILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRT 411
Query: 563 EHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIP 622
+ V+FI T Q+++Y H ++ KG LK + L K+CN LL ++
Sbjct: 412 DIVLFIKPTHQQENVYGHVLDGFKSSVDQKG---YYLKILTRLSKICNSTILLRNEKENF 468
Query: 623 GSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQT 682
S EL D +++ + SSK +LA L K K V++S Y +T
Sbjct: 469 LSTEL--------QDKHVFEQENMLLS--SSKLQILAALL-KSFQRGCQKAVIVSQYKET 517
Query: 683 LDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEF-IFLLSSKAGGCGINLIG 741
L+LIE H +L G+ ++R +V FN +EF + LLSSKAGGCG+NL G
Sbjct: 518 LELIELFLSILHVRFCKLLGSTPFSERDLIVHNFNTSSFKEFSVLLLSSKAGGCGLNLTG 577
Query: 742 ANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSC 801
+ RLI+ +P WNPA D QAL+R++R GQK+ IY F+S+G ++E+IF RQ+ K LSS
Sbjct: 578 STRLIIYEPSWNPAQDLQALSRIYRSGQKRPVCIYTFLSSGMLDERIFIRQNTKQGLSSS 637
Query: 802 VVD-EKEDVERLFSSDNLKQLFKLDTKTICDTHE 834
+D + + F+ +++K LF C T+E
Sbjct: 638 FIDSDASQKKNFFTGEDIKTLFSYSKTETCLTYE 671
>CE23323 [L] KOG0390 DNA repair protein SNF2 family
Length = 751
Score = 290 bits (742), Expect = 7e-78
Identities = 182/505 (36%), Positives = 270/505 (53%), Gaps = 73/505 (14%)
Query: 350 LKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSV 409
L + ++ + C+I+ PSSLVNNW E DKW ++ +A +
Sbjct: 174 LPRSKTAQQLANSCLIIVPSSLVNNWKAEFDKWWRLMRFPAV-------------IALTA 220
Query: 410 SHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSI 469
+ + Q + P L+ISYD +R+VE+LK +M+ DEGH+LKN D L S+
Sbjct: 221 NDITTYQSTIKLMPYLVISYDLAQRHVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSL 280
Query: 470 RCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVT 529
PRR+IL+GTP+QND E+++LL+F P + GS +FRK
Sbjct: 281 EIPRRLILTGTPMQNDFEEFYSLLDFVRPSVFGSIVEFRK-------------------- 320
Query: 530 LGKDRLRQLSNIVSKFIIRRTN-NILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVK 588
+ DR QL+ ++ + ++RRT ++ K+LP K+E+++F +P Q+ ++ +
Sbjct: 321 MCSDRPEQLNELIDECMLRRTAADVDLKHLPEKHEYILFCAASPIQKHVHSEICD----- 375
Query: 589 KIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQ 648
+ GD+ L I ++L NHP LL D+ + + + S +
Sbjct: 376 -YMTGDA---LSLIFFARQLANHPKLLL-------------DNLREKTEKSKAHKHSPLL 418
Query: 649 TAF------------SSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYG 696
AF S K + L + K + V++SNY +TLD+I+++C ++
Sbjct: 419 LAFDGAHMPRGGVKESGKLTALVDMI-KCFRLLQECTVIVSNYIETLDMIQQLCEYLNFK 477
Query: 697 VLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAA 756
VLRLDG + RQKLV FND IFLLS+KAGG G+NLIGA+RL+L D DWNPA
Sbjct: 478 VLRLDGKTQVPDRQKLVRTFNDHRDPSNIFLLSTKAGGVGLNLIGASRLVLFDSDWNPAN 537
Query: 757 DQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD--EKEDVERLFS 814
DQQA+AR+WRDGQ + C IYR I+TGTIEEK+ QRQ K L CV+D E D F+
Sbjct: 538 DQQAMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIEVGDTIATFT 596
Query: 815 SDNLKQLFKL-DTKTICDTHETYNC 838
++LK +F + T C+TH+ C
Sbjct: 597 DEDLKDIFTFTGSATECNTHDLCEC 621
>At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1187
Score = 273 bits (697), Expect = 1e-72
Identities = 173/520 (33%), Positives = 265/520 (50%), Gaps = 51/520 (9%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWL--- 383
G I+ DEMGLGKT+Q L+ + ++ + II+CP +L+ W E KW
Sbjct: 405 GGIIGDEMGLGKTIQVLSFLGSL-----HFSKMYKPSIIICPVTLLRQWRREAQKWYPDF 459
Query: 384 ----------------GPGSLSSLAIDGKKS-SLNNGNVADSVSHWASAQGR--NIVKPV 424
G G S D + S ++ + + W S R N +
Sbjct: 460 HVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEPKSKNTKKWDSLLNRVLNSESGL 519
Query: 425 LIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQN 484
LI +Y+ LR E+L N E G + DEGHR++N +S ++ R+I++G PIQN
Sbjct: 520 LITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQN 579
Query: 485 DLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSK 544
L+E ++L +F PG LG F F +PI + A+ +V+ L +++
Sbjct: 580 KLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMP 639
Query: 545 FIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGL 604
+++RR + +L K EHV+F +LT Q+S Y+ F+ S V++I G+ N L I +
Sbjct: 640 YLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLASSEVEQIFDGNRNS-LYGIDV 698
Query: 605 LKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYK 664
++K+CNHPDLLE + P+ S K V+A L K
Sbjct: 699 MRKICNHPDLLEREHSHQNPDYGNPER--------------------SGKMKVVAEVL-K 737
Query: 665 IKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEF 724
+ + +++L S Q LD++E +N Y R+DG + +R L+D FN+ E F
Sbjct: 738 VWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSEDM-F 796
Query: 725 IFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTI 784
+F+L++K GG G NL GANR+I+ DPDWNP+ D QA R WR GQKKD +YR I+ GTI
Sbjct: 797 VFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTI 856
Query: 785 EEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKL 824
EEK++ RQ K L++ ++ + R F + ++K LF L
Sbjct: 857 EEKVYHRQIYKHFLTNKILKNPQQ-RRFFKARDMKDLFIL 895
>Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1493
Score = 270 bits (691), Expect = 6e-72
Identities = 171/517 (33%), Positives = 274/517 (52%), Gaps = 33/517 (6%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRS------IDKCIIVCPSSLVNNWANEID 380
G I+ DEMGLGKT+Q +A + + + R S + +IVCP+++++ W E
Sbjct: 527 GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFH 586
Query: 381 KWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLK 440
W P ++ L G + + D V+H +LI SY +R + +
Sbjct: 587 TWWPPFRVAILHETGSYTHKKEKLIRD-VAHCHG---------ILITSYSYIRLMQDDIS 636
Query: 441 NCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGL 500
+ ++ DEGH+++N ++ A R P R+ILSG+P+QN+L E ++L +F PG
Sbjct: 637 RYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGK 696
Query: 501 LGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNI--LAKYL 558
LG+ F + F +PI S A+ +V L + ++ +++RR + ++ L
Sbjct: 697 LGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSL 756
Query: 559 PCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELS 618
P K E V+F LT Q +YQ+F++S+ V +I+ G+ Q + L+K+CNHPDL
Sbjct: 757 PDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEM-QIFSGLIALRKICNHPDLFSGG 815
Query: 619 EDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISN 678
P + + +PDD + D RS S L KI + +++L S
Sbjct: 816 ---PKNLKGLPDD-ELEEDQFGYWKRSGKMIVVES--------LLKIWHKQGQRVLLFSQ 863
Query: 679 YTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGIN 738
Q LD++E + Y L++DGT I RQ L+ R+N+ + F+FLL+++ GG G+N
Sbjct: 864 SRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNE-DTSIFVFLLTTRVGGLGVN 922
Query: 739 LIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSL 798
L GANR+++ DPDWNP+ D QA R WR GQKK +YR ++ GTIEEKI+ RQ K L
Sbjct: 923 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 982
Query: 799 SSCVVDEKEDVERLFSSDNLKQLFKLDTKTICDTHET 835
++ V+ + + R F S++L +LF L + + ET
Sbjct: 983 TNRVLKDPKQ-RRFFKSNDLYELFTLTSPDASQSTET 1018
>ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 695
Score = 270 bits (690), Expect = 7e-72
Identities = 176/526 (33%), Positives = 274/526 (51%), Gaps = 51/526 (9%)
Query: 323 RGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKW 382
R G ++AD+MGLGKT+Q + + +L R + K +I+CP+++V+ W +D+W
Sbjct: 167 RDEKGGVLADDMGLGKTIQVIVFLGALLHS-----RVVSKALILCPATIVSQW---MDEW 218
Query: 383 LGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNC 442
+ V ++SY+ + V KN
Sbjct: 219 KRFYPFVRIFFGFPNEDCEG---------------------VYLMSYEKFKAGV---KNF 254
Query: 443 EVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLG 502
+++ DEGHR+KN ++ ++ R R +LSGTPIQN+L E +++ +F NPGLLG
Sbjct: 255 LWDVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLLG 314
Query: 503 SRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKY 562
S F + FE I + A++ +V L +++ +I+RRT + ++ LP K
Sbjct: 315 SHTSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRSLIEPYILRRTKSQVSHKLPSKE 374
Query: 563 EHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDL-----LEL 617
+ ++F +LTP Q LY +ES+ + K++ G +N L I +L+K+CNHP L L +
Sbjct: 375 DKIVFCSLTPAQIELYNRVLESKHIMKVLTGKANL-LSGISMLRKVCNHPRLLFPRKLGV 433
Query: 618 SEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSS--KFSVLARFLYKIKTESNDKIVL 675
SED EE D+ ++ V SS K +L L K ++E N K+++
Sbjct: 434 SED---CEEEASDEKNGEDEALELPGADVSYDLVSSSCKIKILVDLLKKWRSEGN-KVLV 489
Query: 676 ISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGC 735
S + LD+IE+ Y LR+DG + R LVDRFN+ E F+FLL++K GG
Sbjct: 490 FSQTIRMLDIIERCV--RKYTYLRMDGRTPTSSRPGLVDRFNEDE-DVFLFLLTTKVGGL 546
Query: 736 GINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMK 795
G+NL GA+R+++ DPDWNP+ D QA R WR GQKK IYRF+ TIEEK++Q+Q K
Sbjct: 547 GLNLTGASRIVIYDPDWNPSTDTQAKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFK 606
Query: 796 MSLSSCVVDEKEDVERLFSSDNLKQLFKLD-TKTICD--THETYNC 838
L V+ + R F+ + +LF T + + THE + C
Sbjct: 607 DLLGKKVLSNPR-LSRFFNKSCINELFSFTMTGDLVEVKTHEVHRC 651
>SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 973
Score = 265 bits (676), Expect = 3e-70
Identities = 184/535 (34%), Positives = 274/535 (50%), Gaps = 65/535 (12%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGP- 385
G I+ DEMGLGKT+Q ++ + ++ G + ++ IVCP++L+ W NE W P
Sbjct: 297 GGIIGDEMGLGKTIQIVSFLSSLHHSGKFQKPAL----IVCPATLMKQWVNEFHTWWAPL 352
Query: 386 ----------------------GSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP 423
S + K+S+ + S +A +N+V+
Sbjct: 353 RVVVLHATGSGQRASREKRQYESDASESEAEESKTSIKLRGASSSFHRYA----KNLVES 408
Query: 424 V------LIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVIL 477
V LI +Y LR + + E G + DEGH+++N DS + IR R+IL
Sbjct: 409 VFTRGHILITTYAGLRIYGDLILPREWGYCVLDEGHKIRNPDSEISISCKQIRTVNRIIL 468
Query: 478 SGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQ 537
SGTPIQN+L+E + L +F PG LG+ F+ F LPI + A++ +V
Sbjct: 469 SGTPIQNNLTELWNLFDFVFPGRLGTLPVFQNQFALPINIGGYANASNVQVQTAYKCACM 528
Query: 538 LSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQ 597
L +++S +++RR +A LP K E V+F LTP Q+ YQ F++ ++KI+ G Q
Sbjct: 529 LRDLISPYLLRRMKLDVAADLPKKSEQVLFCKLTPLQRKAYQDFLQGSDMQKILNG-KRQ 587
Query: 598 PLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSV 657
L I +L+K+CNHPDL+ E L+ + + D S VI
Sbjct: 588 MLYGIDILRKICNHPDLVT-------REYLLHKEDYNYGDPEKSGKLKVI---------- 630
Query: 658 LARFLYKIKTESNDKIVLISNYTQTLDLIE---KMCFSNHYGVLRLDGTMNINKRQKLVD 714
R L + + + +L S Q LD++E K HY R+DG+ +I RQ LVD
Sbjct: 631 --RALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLPDVHY--CRMDGSTSIALRQDLVD 686
Query: 715 RFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCF 774
FN E + +FLL+++ GG G+NL GA+R+IL DPDWNP+ D QA R WR GQKKD
Sbjct: 687 NFNKNEYFD-VFLLTTRVGGLGVNLTGADRVILFDPDWNPSTDAQARERAWRLGQKKDVV 745
Query: 775 IYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKL-DTKT 828
+YR ++ GTIEEKI+ RQ K L++ ++ + + R F +L LF L D KT
Sbjct: 746 VYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQ-RRFFKMTDLHDLFTLGDNKT 799
>YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1085
Score = 261 bits (668), Expect = 3e-69
Identities = 179/547 (32%), Positives = 272/547 (49%), Gaps = 69/547 (12%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKW---- 382
G I+ DEMGLGKT+Q +A + + G +IVCP++++ W NE W
Sbjct: 317 GGIIGDEMGLGKTIQVIAFIAALHHSG----LLTGPVLIVCPATVMKQWCNEFQHWWPPL 372
Query: 383 -------LGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP------------ 423
+G G S ++ L N + S ++ +N +
Sbjct: 373 RTVILHSMGSGMASDQKFKMDENDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDK 432
Query: 424 ----------VLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPR 473
+LI +Y LR + ++L + + DEGH+++N DS ++
Sbjct: 433 LIDKVVTDGHILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHN 492
Query: 474 RVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKD 533
R+ILSGTPIQN+L+E ++L +F PG LG+ F++ F +PI + AT+ +V G
Sbjct: 493 RIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYK 552
Query: 534 RLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKG 593
L +++S +++RR +AK LP K E V+F LT +Q+S Y F+ S + +I G
Sbjct: 553 CAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNG 612
Query: 594 DSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSR-NRSVIQTAFS 652
N L I +L+K+CNHPDLL D T R N S
Sbjct: 613 KRNV-LFGIDILRKICNHPDLL---------------------DRDTKRHNPDYGDPKRS 650
Query: 653 SKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFS-----NHYGVLRLDGTMNIN 707
K V+ + L + + K +L + Q LD++E+ + +H LR+DGT NI
Sbjct: 651 GKMQVVKQLLL-LWHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIK 709
Query: 708 KRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRD 767
RQ LVDRFN+ +FLL+++ GG G+NL GANR+I+ DPDWNP+ D QA R WR
Sbjct: 710 GRQSLVDRFNNESFD--VFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRI 767
Query: 768 GQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTK 827
GQK++ IYR + G+IEEKI+ RQ K L++ ++ + + +R F L LF L +
Sbjct: 768 GQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQ-KRFFKIHELHDLFSLGGE 826
Query: 828 TICDTHE 834
T E
Sbjct: 827 NGYSTEE 833
>At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1447
Score = 250 bits (638), Expect = 8e-66
Identities = 188/597 (31%), Positives = 292/597 (48%), Gaps = 89/597 (14%)
Query: 296 ITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQ 355
+TG + E + S+ V S ++G GCI+A MGLGKT Q +A ++T ++
Sbjct: 692 VTGIRFMWENIIQSISRV-----KSGDKGL-GCILAHTMGLGKTFQVIAFLYTAMRCVDL 745
Query: 356 GRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASA 415
G ++ +IV P ++++NW +E +KW+ P + L I ++ D ++ W
Sbjct: 746 GLKT---ALIVTPVNVLHNWRSEFEKWM-PSEVKPLRIF-MLGDVSRERRFDLLTKWRKK 800
Query: 416 QGRNIVKPVLIISYDTLR-----RNVEQLKNCE---------VGLMLADEGHRLKNADSL 461
G V ++ Y R R V+ L +++ DE H +KN +
Sbjct: 801 GG------VFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKAD 854
Query: 462 TFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDS 521
T AL ++C RR+ L+G+P+QN+L EY+ +++F G LGS +FR F+ PI +
Sbjct: 855 TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHM 914
Query: 522 LATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHF 581
+T E+V + R L + F+ R N++ K LP K VI + L+P Q+ LYQ F
Sbjct: 915 NSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRF 974
Query: 582 IESRAVKKIVKGDSNQPLK-----AIGLLKKLCNHPDLLEL-SEDIP----GSEELIPDD 631
+E + G +++ ++ A +L ++ NHP + +L SED GS IPDD
Sbjct: 975 LE---LYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDD 1031
Query: 632 YQSS-------VDSRTSRNRSVIQ-----------------------TAFSSKFSVLARF 661
S V R + +Q + FS K +L
Sbjct: 1032 CSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDI 1091
Query: 662 LYKIKTESNDKIVLISNYTQTLDLIEKMC------------FSNHYGVLRLDGTMNINKR 709
L + + DK ++ S TLDLIE + R+DG ++R
Sbjct: 1092 L-SMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSER 1150
Query: 710 QKLVDRFNDPEGQEF-IFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDG 768
QKLVDRFN+P+ + L+S++AG GINL ANR+I++D WNP D QA+ R WR G
Sbjct: 1151 QKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYG 1210
Query: 769 QKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLD 825
QKK F YR ++ GTIEEKI++RQ K L++ VVD ++ V R S + + LF+ D
Sbjct: 1211 QKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEFD 1266
>At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1132
Score = 246 bits (627), Expect = 1e-64
Identities = 171/537 (31%), Positives = 282/537 (51%), Gaps = 49/537 (9%)
Query: 270 DFLDAKTVLDSSSQSMEKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCI 329
D L+ + +S+ S+++ T+ S + G + + L+ ++ + N+ N I
Sbjct: 402 DLLEGQRQYNSAIHSIQEKVTEQPSLLEGGELR-SYQLEGLQWMVSLFNNNLNG-----I 455
Query: 330 MADEMGLGKTLQCLALMWTMLK-QGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
+ADEMGLGKT+Q ++L+ +L+ +G G +IV P +++ NW NE W+ S+
Sbjct: 456 LADEMGLGKTIQTISLIAYLLENKGVPG-----PYLIVAPKAVLPNWVNEFATWVP--SI 508
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLML 448
++ DG+ ++ + +G+ VLI YD + R+ LK E M+
Sbjct: 509 AAFLYDGRLEERK------AIREKIAGEGKF---NVLITHYDLIMRDKAFLKKIEWYYMI 559
Query: 449 ADEGHRLKNADS-LTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDF 507
DEGHRLKN +S L T L R RR++L+GTPIQN L E ++LLNF P + S +F
Sbjct: 560 VDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSVQNF 619
Query: 508 RKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIF 567
+ F P + TDEE L + +L +++ FI+RR + + K+LP K + ++
Sbjct: 620 EEWFNAPFADRGNVSLTDEEELL---IIHRLHHVIRPFILRRKKDEVEKFLPGKTQVILK 676
Query: 568 INLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGL-LKKLCNHPDLLELSEDIPGSEE 626
+++ +Q+ Y+ + V ++ L+ + + L+K CNHP L
Sbjct: 677 CDMSAWQKVYYKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNHPYLF----------- 725
Query: 627 LIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLI 686
+ DY R S KF +L R L K++ ++ +I+L S T+ +D++
Sbjct: 726 -VGGDYNMWKKPEIVRA--------SGKFELLDRLLPKLR-KAGHRILLFSQMTRLIDVL 775
Query: 687 EKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLI 746
E N Y LRLDGT ++R L+ +FN+P+ F+FLLS++AGG G+NL A+ +I
Sbjct: 776 EIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVI 835
Query: 747 LLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV 803
+ D DWNP DQQA R R GQKK+ ++ +S G++EE I +R KM + + V+
Sbjct: 836 IFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVI 892
>Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1359
Score = 241 bits (614), Expect = 5e-63
Identities = 219/823 (26%), Positives = 345/823 (41%), Gaps = 198/823 (24%)
Query: 106 RRSFTVPIKGYVPRHNIPMALGTKAK--VVIPPRPLHDPTDELAIVLYDPTVDGDIPEQH 163
R+ + PI VP +P + +A +PPR L I L + D
Sbjct: 36 RKDYAAPIPT-VPLEFLPEEIALRASDGPQLPPRVLAQEV----ICLDSSSGSEDEKSSR 90
Query: 164 EDLESFRQNAVDTKKSQKGKDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNKTLKELLG 223
+++ DT +S S+D + +E N V N+ ++ LG
Sbjct: 91 DEVIELSSGEEDTLHIVDSSESVSEDDEEEEKGGTHV----------NDVLNQ--RDALG 138
Query: 224 SSEDNTSKKFPNVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQ 283
N + V + P+LA+ ++PHQ+ G+RFLY D+ +
Sbjct: 139 RVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLY------------------DNLVE 180
Query: 284 SMEKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCL 343
S+E+ T + +GCI+A MGLGKTLQ +
Sbjct: 181 SLERFKTSS--------------------------------GFGCILAHSMGLGKTLQVI 208
Query: 344 ALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSS---- 399
+ + + + P + + P + + NW E + WL P +L D K
Sbjct: 209 SFIDVLFRHTPA-----KTVLAIVPVNTLQNWLAEFNMWLPPPE--ALPADNKPEEVQPR 261
Query: 400 ------LNN-----GNVADSVSHWASAQGRNIV--------------------------K 422
LN+ + A ++ W S G ++
Sbjct: 262 FFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGRPKKTKKRSH 321
Query: 423 PVLIISYDTLRRNVEQLKNCEVGL-------MLADEGHRLKNADSLTFTALDSIRCPRRV 475
PV II D R E + E L ++ DEGHR+KN + T AL +IR RRV
Sbjct: 322 PV-IIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALKNIRSRRRV 380
Query: 476 ILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRL 535
+L+G P+QN+L EY+ +++F P LG+R +F FE PIL + +T ++V L + R
Sbjct: 381 VLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLMRYRS 440
Query: 536 RQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDS 595
L +++ F+ RR + +L +LP K E+VI + L+ Q+ LY F++
Sbjct: 441 HVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRFRDCGSSGWLG 500
Query: 596 NQPLKAIGLLKKLCNHPDLLE---LSEDIPGSEELIPDDYQSSVDS------------RT 640
PLKA + K+ NHPD+L E + ++L ++ S+ S
Sbjct: 501 LNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSARCPPQGTKGKGED 560
Query: 641 SRNRSVIQTAFSSKF---------------------------------------SVLARF 661
S S + A +SKF VL
Sbjct: 561 STLASSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQTGVLENSPKMVLLFH 620
Query: 662 LYKIKTESNDKIVLISNYTQTLDLIEKMC------------------FSNHYGVLRLDGT 703
L + + DKI++ S TL LIE+ + + RLDG+
Sbjct: 621 LIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVRNISYFRLDGS 680
Query: 704 MNINKRQKLVDRFNDPEG-QEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALA 762
+R++L+++FNDP ++FLLS++AG G+NLIGANR+++ D WNP D QA+
Sbjct: 681 TPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVC 740
Query: 763 RVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDE 805
RV+R GQKK C+IYR ++ T+E+KI+ RQ K +S VVD+
Sbjct: 741 RVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 783
>At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1041
Score = 240 bits (612), Expect = 8e-63
Identities = 168/540 (31%), Positives = 276/540 (51%), Gaps = 56/540 (10%)
Query: 270 DFLDAKTVLDSSSQSMEKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCI 329
D L+ + + + S+++ T+ S + G + + L+ ++ + N Y I
Sbjct: 332 DLLEGERQFNLAIHSIQEKVTKQPSLLQGGELR-SYQLEGLQWMVSLYNND-----YNGI 385
Query: 330 MADEMGLGKTLQCLALMWTMLKQ----GPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGP 385
+ADEMGLGKT+Q +AL+ +L+ GP +I+ P +++ NW NE W
Sbjct: 386 LADEMGLGKTIQTIALIAYLLESKDLHGPH--------LILAPKAVLPNWENEFALWAP- 436
Query: 386 GSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVG 445
S+S+ DG K + + VLI YD + R+ LK +
Sbjct: 437 -SISAFLYDGSKEKRTEIRARIAGGKFN----------VLITHYDLIMRDKAFLKKIDWN 485
Query: 446 LMLADEGHRLKNAD-SLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSR 504
M+ DEGHRLKN + +L T R RR++L+GTPIQN L E ++LLNF P + S
Sbjct: 486 YMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSI 545
Query: 505 NDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEH 564
++F + F P + + TDEE L +RL +++ F++RR + + K+LP K +
Sbjct: 546 HNFEEWFNTPFAECGSASLTDEEELLIINRLH---HVIRPFLLRRKKSEVEKFLPGKTQV 602
Query: 565 VIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGL-LKKLCNHPDLLELSEDIPG 623
++ +++ +Q+ Y+ + V ++ L+ + + L+K CNHP L
Sbjct: 603 ILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQNLTMQLRKCCNHPYLFV------- 655
Query: 624 SEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTL 683
D + +++ S KF +L R L K+K ++ +I+L S T+ +
Sbjct: 656 -----------GADYNMCKKPEIVRA--SGKFELLDRLLPKLK-KAGHRILLFSQMTRLI 701
Query: 684 DLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGAN 743
DL+E N Y LRLDG+ ++R L+ +FN+P+ F+FLLS++AGG G+NL A+
Sbjct: 702 DLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTAD 761
Query: 744 RLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV 803
+I+ D DWNP DQQA R R GQKK+ ++ +S G+IEE I +R KM + + V+
Sbjct: 762 TIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVI 821
>CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2957
Score = 234 bits (598), Expect = 3e-61
Identities = 163/507 (32%), Positives = 257/507 (50%), Gaps = 49/507 (9%)
Query: 325 AYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLG 384
A CI+ADEMGLGKT+Q + + + G G ++V P S + NW E + W
Sbjct: 1205 AQNCILADEMGLGKTVQTITFLSRIYDYGIHG-----PFLVVVPLSTIQNWVREFETWTD 1259
Query: 385 PGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGR-NIVK-PVLIISYDTLRRNVEQLKNC 442
++ + L V H + + N VK LI +++T+ +VE LK
Sbjct: 1260 MNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKIDALITTFETVVSDVEFLKKI 1319
Query: 443 EVGLMLADEGHRLKNAD-SLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLL 501
+ + DE HRLKN + L L + R RV+L+GTP+QN++ E F+LLNF +P
Sbjct: 1320 PWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNIDELFSLLNFLHPQQF 1379
Query: 502 GSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCK 561
+ F + F S TD++V ++L I+ ++RR + K L K
Sbjct: 1380 DNSATFLEQF--------GSCQTDDQV-------QKLQEILKPMMLRRLKEDVEKSLGPK 1424
Query: 562 YEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGL-LKKLCNHPDLLELSED 620
E +I + L+ Q+ Y+ +E R + KG S L + + L+K CNHP L+
Sbjct: 1425 EETIIEVQLSDMQKKFYRAILE-RNFSHLCKGTSAPSLMNVMMELRKCCNHPFLIN---- 1479
Query: 621 IPGSEELIPDDYQSSV---DSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLIS 677
G+EE I +D++ + D T ++++IQ S K ++ + L K++ + + K+++ S
Sbjct: 1480 --GAEEAIMNDFRLAHPDWDEETLAHKALIQA--SGKVVLIEKLLPKLRKDGH-KVLIFS 1534
Query: 678 NYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGI 737
+ LDL+E+ S Y R+DG + + RQ +DRF+ F+FLL ++AGG GI
Sbjct: 1535 QMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGI 1594
Query: 738 NLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMS 797
NL A+ +I+ D DWNP D QA AR R GQKK +YR I++ T E ++F + S+K+
Sbjct: 1595 NLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLG 1654
Query: 798 LSSCVVD------------EKEDVERL 812
L V+ K+DVE L
Sbjct: 1655 LDKAVLQSTTALKAEGTALSKKDVEEL 1681
>At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 874
Score = 233 bits (595), Expect = 8e-61
Identities = 174/585 (29%), Positives = 281/585 (47%), Gaps = 90/585 (15%)
Query: 326 YGCIMADEMGLGKTLQCLALMWTML-KQGPQGRRSI---DK--CIIVCPSSLVNNWANEI 379
+G I+ D+MGLGKT+Q +A + + K G G + DK +I+CPSS+++NW +E
Sbjct: 170 HGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDKGPVLIICPSSIIHNWESEF 229
Query: 380 DKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQL 439
+W K S+ +G+ D + A+G VL+ S+DT R L
Sbjct: 230 SRWAS----------FFKVSVYHGSNRDMILEKLKARGVE----VLVTSFDTFRIQGPVL 275
Query: 440 KNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPG 499
+++ADE HRLKN S + A I+ +R+ L+GT +QN +SE F L + PG
Sbjct: 276 SGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELFNLFEWVAPG 335
Query: 500 LLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRT-NNILAKYL 558
LG+R FR ++ P+ + + A + V + R + L +++ K+++RRT + +
Sbjct: 336 SLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRRTKEETIGHLM 395
Query: 559 PCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDS----NQPLKAIGLLKKLC----- 609
K ++V+F ++ Q+ +YQ I+ ++ +V D+ PLK +++
Sbjct: 396 MGKEDNVVFCQMSQLQRRVYQRMIQLPEIQCLVNKDNPCACGSPLKQSECCRRIVPDGTI 455
Query: 610 -------NH------------PDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTA 650
NH P L++L + I ELI + + + + ++ + T
Sbjct: 456 WSYLHRDNHDGCDSCPFCLVLPCLMKL-QQISNHLELIKPNPKDEPE-KQKKDAEFVSTV 513
Query: 651 FSSKFSVLA--------------------RFLYKIKT---ESNDKIVLISNYTQTLDLIE 687
F + +L R L K+ DKI+L S + LD++E
Sbjct: 514 FGTDIDLLGGISASKSFMDLSDVKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILE 573
Query: 688 KMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLIL 747
K Y RLDG+ N RQ LVD FN ++ +FL+S+KAGG G+NL+ ANR+++
Sbjct: 574 KFLIRKGYSFARLDGSTPTNLRQSLVDDFNASPSKQ-VFLISTKAGGLGLNLVSANRVVI 632
Query: 748 LDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV---- 803
DP+WNP+ D QA R +R GQK+ ++R +S G++EE ++ RQ K LS+ V
Sbjct: 633 FDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAVAGKM 692
Query: 804 ---------DEKEDVERLFSSDNLKQLF--KLDTKTICDTHETYN 837
D KE LF NL + KL T I + H N
Sbjct: 693 ETRYFEGVQDCKEFQGELFGISNLFRDLSDKLFTSDIVELHRDSN 737
>YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1359
Score = 231 bits (589), Expect = 4e-60
Identities = 167/531 (31%), Positives = 265/531 (49%), Gaps = 59/531 (11%)
Query: 286 EKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLAL 345
EK D Q + G+ E + L+ ++ + N N I+ADEMGLGKT+Q ++L
Sbjct: 456 EKIDKQPSILVGGTLK--EYQLRGLEWMVSLYNNHLNG-----ILADEMGLGKTIQSISL 508
Query: 346 MWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNV 405
+ + + ++ I +++ P S + NW E +KW SL+++ G N
Sbjct: 509 ITYLYEV----KKDIGPFLVIVPLSTITNWTLEFEKWAP--SLNTIIYKGTP------NQ 556
Query: 406 ADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADS-LTFT 464
S+ H + VL+ +Y+ + ++ L + M+ DEGHR+KNA S L+FT
Sbjct: 557 RHSLQHQIRVGNFD----VLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFT 612
Query: 465 ALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQS--RDSL 522
R R+IL+GTP+QN+L E +ALLNF P + S F F P + ++ L
Sbjct: 613 ISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKL 672
Query: 523 ATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFI 582
EE TL +R+L ++ F++RR + K LP K E VI L+ QQ LYQ +
Sbjct: 673 ELTEEETLLI--IRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQML 730
Query: 583 ESRAV----------KKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDY 632
+ A+ K +KG +N+ ++ L+K+CNHP + + E +
Sbjct: 731 KHNALFVGAGTEGATKGGIKGLNNKIMQ----LRKICNHPFVFDEVEGVVNP-------- 778
Query: 633 QSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFS 692
SR S + + KF +L R L K K S ++++ TQ +D++E
Sbjct: 779 --------SRGNSDLLFRVAGKFELLDRVLPKFKA-SGHRVLMFFQMTQVMDIMEDFLRM 829
Query: 693 NHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDW 752
+RLDG+ +R ++++ FN P+ F FLLS++AGG G+NL A+ +I+ D DW
Sbjct: 830 KDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDW 889
Query: 753 NPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV 803
NP D QA R R GQK + I R I+T ++EE I +R K+ + V+
Sbjct: 890 NPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVI 940
>YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1120
Score = 230 bits (587), Expect = 6e-60
Identities = 172/578 (29%), Positives = 286/578 (48%), Gaps = 81/578 (14%)
Query: 273 DAKTVLDSSSQSMEKADTQADSNITGSKSPVET------DVSSLKDVIKINENSRNRGAY 326
DA+ + D + ++ Q D ++ S S V++ V L +I ++EN +
Sbjct: 151 DAELMADEEEEIVDTY--QEDIFVSESPSFVKSGKLRDYQVQGLNWLISLHENKLSG--- 205
Query: 327 GCIMADEMGLGKTLQCLA----LMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKW 382
I+ADEMGLGKTLQ ++ L + +GP +I+ P S ++NW E KW
Sbjct: 206 --ILADEMGLGKTLQTISFLGYLRYVKQIEGP--------FLIIVPKSTLDNWRREFLKW 255
Query: 383 LGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP----VLIISYDTLRRNVEQ 438
+++ L + G K + AD V RNI+ VLI SY+ + R
Sbjct: 256 TP--NVNVLVLHGDKDTR-----ADIV--------RNIILEARFDVLITSYEMVIREKNA 300
Query: 439 LKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNP 498
LK ++ DE HR+KN S + R++++GTP+QN+L E +ALLNF P
Sbjct: 301 LKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLP 360
Query: 499 GLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYL 558
+ G F + FE +++ D+E+ + +QL ++++ F++RR + K L
Sbjct: 361 DIFGDSELFDEWFE------QNNSEQDQEIVI-----QQLHSVLNPFLLRRVKADVEKSL 409
Query: 559 PCKYEHVIFINLTPFQQSLYQHFIESR--AVKKIV--KGDSNQPLKAIGLLKKLCNHPDL 614
K E +++ +T Q Y+ +E AV V + + L + L+K CNHP L
Sbjct: 410 LPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYL 469
Query: 615 LELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIV 674
E +E P + D N S K +L + L ++K E +++
Sbjct: 470 FEGAEPGP----------PYTTDEHLIFN--------SGKMIILDKLLKRLK-EKGSRVL 510
Query: 675 LISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGG 734
+ S ++ LD++E C+ + R+DG+ + +R + +D +N P ++F+FLL+++AGG
Sbjct: 511 IFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGG 570
Query: 735 CGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSM 794
GINL+ A+ +IL D DWNP AD QA+ R R GQKK +YRF++ IEEK+ +R +
Sbjct: 571 LGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQ 630
Query: 795 KMSLSSCVVDE---KEDVERLFSSDNLKQLFKLDTKTI 829
K+ L V+ + K+ S D+L + + K +
Sbjct: 631 KLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQFGAKNM 668
>Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2713
Score = 228 bits (580), Expect = 4e-59
Identities = 154/512 (30%), Positives = 258/512 (50%), Gaps = 48/512 (9%)
Query: 328 CIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGS 387
CI+ADEMGLGKT+Q + + + +G G +I+ P S + NW E W
Sbjct: 480 CILADEMGLGKTIQSITFLSEIFLRGIHG-----PFLIIAPLSTITNWEREFRTWT---E 531
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP----VLIISYDTLRRNVEQLKNCE 443
++++ G S ++ + + AQG + V+I +++ + + +LK
Sbjct: 532 MNAIVYHG--SQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIH 589
Query: 444 VGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGS 503
++ DE HRLKN + L + +V+L+GTP+QN + E F+LLNF P S
Sbjct: 590 WSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPS 649
Query: 504 RNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYE 563
F + F L T+E+V ++L +I+ ++RR + + K L K E
Sbjct: 650 ETAFLEEF--------GDLKTEEQV-------KKLQSILKPMMLRRLKDDVEKNLAPKQE 694
Query: 564 HVIFINLTPFQQSLYQHFIESRAVKKIVKGDS--NQP--LKAIGLLKKLCNHPDLLELSE 619
+I + LT Q+ Y+ +E + KG + N P + + L+K CNHP L+
Sbjct: 695 TIIEVELTNIQKKYYRAILEKN-FSFLTKGANQHNMPNLINTMMELRKCCNHPYLIN--- 750
Query: 620 DIPGSEELIPDDYQS--SVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLIS 677
G+EE I +D++ S D+ + +++IQ A K ++ + L K+ K+++ S
Sbjct: 751 ---GAEEKILEDFRKTHSPDAPDFQLQAMIQAA--GKLVLIDKLLPKL-IAGGHKVLIFS 804
Query: 678 NYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGI 737
+ LD++E Y R+DG + N RQ +DRF P+ F+FLL ++AGG GI
Sbjct: 805 QMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGI 864
Query: 738 NLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMS 797
NL A+ I+ D DWNP D QA AR R GQ K +YR I+ + E ++F + S+K+
Sbjct: 865 NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLG 924
Query: 798 LSSCVVDEKEDVERLFSSDNLKQLFKLDTKTI 829
L V+ +D+ R ++ ++QL K++ + +
Sbjct: 925 LDKAVL---QDINRKGGTNGVQQLSKMEVEDL 953
>At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1738
Score = 227 bits (579), Expect = 5e-59
Identities = 160/552 (28%), Positives = 282/552 (50%), Gaps = 48/552 (8%)
Query: 271 FLDAKTVLDSSSQSMEKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIM 330
F +A+ L S S+ K D Q + I G+ + + L ++ N N I+
Sbjct: 612 FSNAELWLLFSVASLRKLDEQPEWLIGGTLRDYQLE--GLNFLVNSWLNDTN-----VIL 664
Query: 331 ADEMGLGKTLQCLALMWTMLKQGPQGRRSID-KCIIVCPSSLVNNWANEIDKWLGPGSLS 389
ADEMGLGKT+Q ++++ + Q + I ++V P S + NWA E KWL PG ++
Sbjct: 665 ADEMGLGKTVQSVSMLGFL-----QNTQQIPGPFLVVVPLSTLANWAKEFRKWL-PG-MN 717
Query: 390 SLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLA 449
+ G ++S N + V GR I L+ +Y+ + ++ L + ++
Sbjct: 718 IIVYVGTRASREVRNKTNDVHK----VGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMV 773
Query: 450 DEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRK 509
DE HRLKN+++ +TAL +++++GTP+QN + E +ALL+F +PG ++++F +
Sbjct: 774 DEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVE 833
Query: 510 NFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFIN 569
N++ +L++ E L L + I+RR + K LP K E ++ +
Sbjct: 834 NYK--------NLSSFNESELANLHLE-----LRPHILRRVIKDVEKSLPPKIERILRVE 880
Query: 570 LTPFQQSLYQHFIESRA--VKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEEL 627
++P Q+ Y+ +E + K V+G+ L + LKK CNHP L E ++
Sbjct: 881 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADH------- 933
Query: 628 IPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIE 687
Y ++ + ++ ++ S K +L + L +++ E+ ++++ S + LD++
Sbjct: 934 ---GYGGDINDNSKLDKIILS---SGKLVILDKLLVRLR-ETKHRVLIFSQMVRMLDILA 986
Query: 688 KMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLIL 747
+ + RLDG+ RQ+ +D FN P +F FLLS++AGG GINL A+ +++
Sbjct: 987 EYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVI 1046
Query: 748 LDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKE 807
D DWNP D QA++R R GQ++ IYRF+++ ++EE+I +R KM L V+ +
Sbjct: 1047 FDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLN 1106
Query: 808 DVERLFSSDNLK 819
RL + K
Sbjct: 1107 AEGRLEKRETKK 1118
>Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1052
Score = 224 bits (572), Expect = 4e-58
Identities = 159/512 (31%), Positives = 254/512 (49%), Gaps = 63/512 (12%)
Query: 307 VSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIV 366
V L +I + EN N I+ADEMGLGKTLQ ++L+ M R +++
Sbjct: 185 VRGLNWLISLYENGING-----ILADEMGLGKTLQTISLLGYMKHY----RNIPGPHMVL 235
Query: 367 CPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP--- 423
P S ++NW +E +W+ +L S+ + G K +A R+++ P
Sbjct: 236 VPKSTLHNWMSEFKRWVP--TLRSVCLIGDKEQ-------------RAAFVRDVLLPGEW 280
Query: 424 -VLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPI 482
V + SY+ L + K ++ DE HR+KN S + + R++L+GTP+
Sbjct: 281 DVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPL 340
Query: 483 QNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRL-RQLSNI 541
QN+L E ++LLNF P + S +DF F D LG +L +L +
Sbjct: 341 QNNLHELWSLLNFLLPDVFNSADDFDSWF-------------DTNNCLGDQKLVERLHMV 387
Query: 542 VSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFI--ESRAVKKIVKGDSNQPL 599
+ F++RR + K LP K E I++ L+ Q+ Y + + + K D + L
Sbjct: 388 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL 447
Query: 600 KAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLA 659
+ L+K CNHP L + +E P Y + + T+ S K VL
Sbjct: 448 NILMQLRKCCNHPYLFDGAEPGP--------PYTTDMHLVTN----------SGKMVVLD 489
Query: 660 RFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDP 719
+ L K+K E ++++ S T+ LD++E C +Y RLDG ++RQ ++ +N+P
Sbjct: 490 KLLPKLK-EQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEP 548
Query: 720 EGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFI 779
+F+F+LS++AGG GINL A+ +IL D DWNP D QA+ R R GQ K ++RFI
Sbjct: 549 NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFI 608
Query: 780 STGTIEEKIFQRQSMKMSLSSCVVDEKEDVER 811
+ T+EE+I +R MK+ L S V+ + V++
Sbjct: 609 TDNTVEERIVERAEMKLRLDSIVIQQGRLVDQ 640
>Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1849
Score = 224 bits (572), Expect = 4e-58
Identities = 158/536 (29%), Positives = 264/536 (48%), Gaps = 61/536 (11%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQ--GRRSIDKC-----IIVCPSSLVNNWANEIDK 381
I+ D+MGLGKTLQ + ++ Q R + +C ++VCP +L +W +E+ K
Sbjct: 1288 ILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGK 1347
Query: 382 WLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKN 441
+ L+ L G + + + + N++ + SYD +R +++ +N
Sbjct: 1348 FCSREYLNPLHYTGPPT--------ERIRLQHQVKRHNLI----VASYDVVRNDIDFFRN 1395
Query: 442 CEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLL 501
+ + DEGH +KN + A+ + R+ILSGTPIQN++ E ++L +F PG L
Sbjct: 1396 IKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFL 1455
Query: 502 GSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCK 561
G+ F + PIL SRD+ ++ E G + L V F++RR + + LP K
Sbjct: 1456 GTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPK 1515
Query: 562 YEHVIFINLTPFQQSLYQHFIESRAVKKI--------VKGDSNQP-LKAIG-------LL 605
+ L+P Q LY+ F +SRA + + ++ +P LKA G L
Sbjct: 1516 IIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQALQYL 1575
Query: 606 KKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLY-- 663
+KLCNHP L+ L+ P +++++ + +N S+ + K S L + L
Sbjct: 1576 RKLCNHPALV-LTPQHP--------EFKTTAEKLAVQNSSLHDIQHAPKLSALKQLLLDC 1626
Query: 664 --------KIKTES---NDKIVLISNYTQTLDLIEKMCFSNH---YGVLRLDGTMNINKR 709
+ TES +I++ LD++E H LRLDG++ +R
Sbjct: 1627 GLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQR 1686
Query: 710 QKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQ 769
+V RFN+ + + LL++ GG G+NL GA+ ++ ++ DWNP D QA+ R R GQ
Sbjct: 1687 HSIVSRFNNDPSID-VLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQ 1745
Query: 770 KKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLD 825
K+ +YR I+ GT+EEKI Q KM++++ V+ ++ + +D L LF LD
Sbjct: 1746 KRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLD 1801
>At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 2049
Score = 224 bits (571), Expect = 5e-58
Identities = 164/541 (30%), Positives = 264/541 (48%), Gaps = 65/541 (12%)
Query: 329 IMADEMGLGKTLQCLALMWTML--KQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPG 386
I+ D+MGLGKTLQ A++ + ++G + IIVCPS+LV +WA EI+K++
Sbjct: 1466 ILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPSIIVCPSTLVGHWAFEIEKYIDLS 1525
Query: 387 SLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGL 446
LS L G + D VS N++ I SYD +R++V+ L
Sbjct: 1526 LLSVLQYVG--------SAQDRVSLREQFNNHNVI----ITSYDVVRKDVDYLTQFSWNY 1573
Query: 447 MLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRND 506
+ DEGH +KNA S A+ ++ R+ILSGTPIQN++ E ++L +F PG LG+
Sbjct: 1574 CILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQ 1633
Query: 507 FRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVI 566
F+ ++ P+L +RD + ++ G + L V F++RRT + LP K
Sbjct: 1634 FQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDR 1693
Query: 567 FINLTPFQQSLYQHFIESRA---VKKIVKGD---------------SNQPLKAIGLLKKL 608
+ +L+P Q LY+ F S A + I+K D S +A+ L KL
Sbjct: 1694 YCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKL 1753
Query: 609 CNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTE 668
C+HP LL L + + E + D + ++ + + + S K L L +
Sbjct: 1754 CSHP-LLVLGDKV---TEPVASDLAAMINGCSDIITELHKVQHSPKLVALQEILEECGIG 1809
Query: 669 SN------------DKIVLISNYTQTLDLIEKMCFSNH---YGVLRLDGTMNINKRQKLV 713
S+ ++++ + + LD+IEK F H +RLDG++ KR ++V
Sbjct: 1810 SDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIV 1869
Query: 714 DRFN-DPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQ-----------QAL 761
FN DP + LL++ GG G+NL A+ L+ ++ DWNP D QA+
Sbjct: 1870 KAFNSDPTID--VLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQFANIELNKLWQAM 1927
Query: 762 ARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQL 821
R R GQK+ ++R I GT+EEK+ Q K+S+++ V++ + + ++D L L
Sbjct: 1928 DRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMNTDQLLDL 1987
Query: 822 F 822
F
Sbjct: 1988 F 1988
>CE17716 [R] KOG0383 Predicted helicase
Length = 1829
Score = 224 bits (570), Expect = 6e-58
Identities = 153/488 (31%), Positives = 240/488 (48%), Gaps = 49/488 (10%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT+Q L +++++K+G +I P S + NW E ++W +
Sbjct: 624 ILADEMGLGKTVQSLTFLYSLMKEG----HCKGPFLIAAPLSTIINWEREAEQWCPDFYV 679
Query: 389 --------SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLK 440
+ + + + S G V N+ VL+ SY+T+ + L
Sbjct: 680 VTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTILS 739
Query: 441 NCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGL 500
+ E G ++ DE HRLKN SL F L+ RV+L+GTP+QN+L E F LLNF +
Sbjct: 740 SIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKER 799
Query: 501 LGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPC 560
F F E++ +D++ +L N++ ++RR + +P
Sbjct: 800 FNQLEAFTAEFN--------------EISK-EDQIEKLHNLLGPHMLRRLKADVLTGMPS 844
Query: 561 KYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQP--LKAIGLLKKLCNHPDLLELS 618
K E ++ + L+ Q+ Y++ + VK Q + + LKK CNHP L +
Sbjct: 845 KSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKA 904
Query: 619 EDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAF---SSKFSVLARFLYKIKTESNDKIVL 675
E +++ +N TA S KF +L + L K+K + ++++
Sbjct: 905 E----------------LEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLK-DGGHRVLI 947
Query: 676 ISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGC 735
S T+ LD++E +C Y R+DG++ RQ +DR+N P Q+FIFLLS++AGG
Sbjct: 948 FSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGL 1007
Query: 736 GINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMK 795
GINL A+ +I+ D DWNP D QA +R R GQK IYRF++ ++EEKI K
Sbjct: 1008 GINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKK 1067
Query: 796 MSLSSCVV 803
M L+ VV
Sbjct: 1068 MLLNHLVV 1075
>7293795 [R] KOG0383 Predicted helicase
Length = 883
Score = 223 bits (569), Expect = 8e-58
Identities = 157/532 (29%), Positives = 260/532 (48%), Gaps = 57/532 (10%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT+Q + ++++ K+G +I P S + NW E++ W P
Sbjct: 289 ILADEMGLGKTIQTVVFLYSLFKEG----HCRGPFLISVPLSTLTNWERELELW-APELY 343
Query: 389 SSLAIDGK--KSSLNNGNVA-DSVSHWASAQGRNIVK-PVLIISYDTLRRNVEQLKNCEV 444
+ GK ++ + ++ + V+ + + K V++ SY+ + + L +
Sbjct: 344 CVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDW 403
Query: 445 GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSR 504
++ DE HRL++ S F L R +++L+GTP+QN+L E F LLNF + G
Sbjct: 404 AALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDL 463
Query: 505 NDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEH 564
F+ F ++ +E+V ++L I+ ++RR + K +P K E
Sbjct: 464 QTFQAEFT--------DVSKEEQV-------KRLHEILEPHMLRRLKADVLKSMPPKSEF 508
Query: 565 VIFINLTPFQQSLYQHFIES--RAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIP 622
++ + L+ Q+ Y+H + +A+ + G L + L+K CNHP
Sbjct: 509 IVRVELSSMQKKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHP---------- 558
Query: 623 GSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQT 682
L P + + S + T S K +L++ L ++K + N +++L S T+
Sbjct: 559 ---YLFPSAAEEATISPSGLYEMSSLTKASGKLDLLSKMLKQLKAD-NHRVLLFSQMTKM 614
Query: 683 LDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGA 742
L+++E Y R+DG++ + RQK +DRFNDP + F+FLLS++AGG GINL A
Sbjct: 615 LNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATA 674
Query: 743 NRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCV 802
+ +I+ D DWNP D QA +R R GQKK IYRF++ ++EE+I Q KM L+ V
Sbjct: 675 DTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLV 734
Query: 803 V-------------DEKEDVERLFSSDNLK----QLFKLDTKTICDTHETYN 837
V DE ED+ R + D K + D K + D + N
Sbjct: 735 VRPGMGGMTTNFSKDELEDILRFGTEDLFKDGKSEAIHYDDKAVADLLDRTN 786
>YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1468
Score = 223 bits (567), Expect = 1e-57
Identities = 149/479 (31%), Positives = 248/479 (51%), Gaps = 36/479 (7%)
Query: 329 IMADEMGLGKTLQCLALM-WTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGS 387
I+ADEMGLGKT+Q +A + W + RR IIV P S + W + +KW
Sbjct: 398 ILADEMGLGKTVQTVAFISWLIF-----ARRQNGPHIIVVPLSTMPAWLDTFEKWAP--D 450
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVK-PVLIISYDTLRRNVEQLKNCEVGL 446
L+ + G + S + + ++ A+G+ +K VL+ +Y+ + ++ +L + +
Sbjct: 451 LNCICYMGNQKSRDTIREYEFYTN-PRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQF 509
Query: 447 MLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRND 506
M DE HRLKNA+S + +L+S + R++++GTP+QN++ E AL+NF PG
Sbjct: 510 MAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPG------- 562
Query: 507 FRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVI 566
I Q D DEE ++ + L + FI+RR + K LP K E ++
Sbjct: 563 -----RFTIDQEIDFENQDEEQ---EEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 614
Query: 567 FINLTPFQQSLYQHFIESR--AVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGS 624
+ L+ Q Y++ + A+ KG L + LKK NHP L + +
Sbjct: 615 RVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFD------NA 668
Query: 625 EELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLD 684
EE + + +R + R +I + S K +L + L ++K + + ++++ S + LD
Sbjct: 669 EERVLQKFGDGKMTRENVLRGLIMS--SGKMVLLDQLLTRLKKDGH-RVLIFSQMVRMLD 725
Query: 685 LIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANR 744
++ RLDGT+ +R+ +D FN P+ +F+FLLS++AGG GINL+ A+
Sbjct: 726 ILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADT 785
Query: 745 LILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV 803
+++ D DWNP AD QA+AR R GQK +YR +S T+EE++ +R KM L ++
Sbjct: 786 VVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAII 844
>Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1970
Score = 221 bits (563), Expect = 4e-57
Identities = 151/511 (29%), Positives = 256/511 (49%), Gaps = 45/511 (8%)
Query: 328 CIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGS 387
CI+ADEMGLGKT+Q + ++ + +G G +++ P S + NW E W
Sbjct: 420 CILADEMGLGKTIQSITFLYEIYLKGIHG-----PFLVIAPLSTIPNWEREFRTWT---E 471
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP----VLIISYDTLRRNVEQLKNCE 443
L+ + G ++S + + ++ QGR I +I +++ + + +L+N
Sbjct: 472 LNVVVYHGSQASRRTIQLYEM--YFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIP 529
Query: 444 VGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGS 503
++ DE HRLKN + L + +V+L+GTP+QN + E F+LL+F P S
Sbjct: 530 WRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPS 589
Query: 504 RNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYE 563
F + F L T+E+V ++L I+ ++RR + K L K E
Sbjct: 590 ETTFMQEF--------GDLKTEEQV-------QKLQAILKPMMLRRLKEDVEKNLAPKEE 634
Query: 564 HVIFINLTPFQQSLYQHFIESR-AVKKIVKGDSNQP--LKAIGLLKKLCNHPDLLELSED 620
+I + LT Q+ Y+ +E G +N P L + L+K CNHP L+
Sbjct: 635 TIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLIN---- 690
Query: 621 IPGSEELIPDDYQSS--VDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISN 678
G+EE I ++++ + +S + +++IQ A K ++ + L K+K + ++++ S
Sbjct: 691 --GAEEKILEEFKETHNAESPDFQLQAMIQAA--GKLVLIDKLLPKLKAGGH-RVLIFSQ 745
Query: 679 YTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGIN 738
+ LD++E Y R+DG + N RQ +DRF+ P+ F+FLL ++AGG GIN
Sbjct: 746 MVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGIN 805
Query: 739 LIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSL 798
L A+ I+ D DWNP D QA AR R GQ K IYR I+ + E ++F + S+K+ L
Sbjct: 806 LTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGL 865
Query: 799 SSCVVDEKEDVERLFSSDNLKQLFKLDTKTI 829
V+ E +++ ++QL K + + +
Sbjct: 866 DKAVLQSMSGREN--ATNGVQQLSKKEIEDL 894
>Hs4557453 [R] KOG0383 Predicted helicase
Length = 1912
Score = 221 bits (562), Expect = 5e-57
Identities = 152/490 (31%), Positives = 241/490 (49%), Gaps = 53/490 (10%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGP--- 385
I+ADEMGLGKT+Q ++++ K+G S ++ P S + NW E + W
Sbjct: 748 ILADEMGLGKTVQTAVFLYSLYKEG----HSKGPFLVSAPLSTIINWEREFEMWAPDMYV 803
Query: 386 ----GSLSSLAI------DGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRN 435
G S AI + +++ G A + AS + VL+ SY+ + +
Sbjct: 804 VTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFH-----VLLTSYELITID 858
Query: 436 VEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNF 495
+ L + + ++ DE HRLKN S F L+ +++L+GTP+QN+L E F LLNF
Sbjct: 859 MAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNF 918
Query: 496 SNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILA 555
P + F + F +A + D++++L +++ ++RR +
Sbjct: 919 LTPERFHNLEGFLEEFA--------DIAKE-------DQIKKLHDMLGPHMLRRLKADVF 963
Query: 556 KYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQP--LKAIGLLKKLCNHPD 613
K +P K E ++ + L+P Q+ Y++ + +G NQ L + LKK CNHP
Sbjct: 964 KNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPY 1023
Query: 614 LLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKI 673
L ++ + ++ Y S R S K +L + L +K E ++
Sbjct: 1024 LFPVAA--MEAPKMPNGMYDGSALIRAS-----------GKLLLLQKMLKNLK-EGGHRV 1069
Query: 674 VLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAG 733
++ S T+ LDL+E Y R+DG + N RQ+ +DRFN P Q+F FLLS++AG
Sbjct: 1070 LIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAG 1129
Query: 734 GCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQS 793
G GINL A+ +I+ D DWNP D QA +R R GQ K IYRF++ ++EE+I Q
Sbjct: 1130 GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAK 1189
Query: 794 MKMSLSSCVV 803
KM L+ VV
Sbjct: 1190 KKMMLTHLVV 1199
>CE03657 [R] KOG0383 Predicted helicase
Length = 1787
Score = 220 bits (561), Expect = 7e-57
Identities = 153/486 (31%), Positives = 241/486 (49%), Gaps = 45/486 (9%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT+Q L ++T++K+G + +I P S + NW E + W +
Sbjct: 638 ILADEMGLGKTVQSLTFLYTLMKEG----HTKGPFLIAAPLSTIINWEREAELWCPDFYV 693
Query: 389 --------SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLK 440
S + I + S +G V N+ VL+ SY+ + + L
Sbjct: 694 VTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILS 753
Query: 441 NCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGL 500
+ + ++ DE HRLKN S F L RV+L+GTP+QN+L E F LLNF P
Sbjct: 754 SIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDR 813
Query: 501 LGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPC 560
F F E++ +D++ +L N++ ++RR + +P
Sbjct: 814 FNQLESFTAEFS--------------EISK-EDQIEKLHNLLGPHMLRRLKADVLTGMPS 858
Query: 561 KYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQP--LKAIGLLKKLCNHPDL-LEL 617
K E ++ + L+ Q+ Y++ + VK Q + I LKK CNHP L ++
Sbjct: 859 KQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKA 918
Query: 618 SEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLIS 677
+ P +L Y+ S ++I+ A KF +L + L K+K + ++++ S
Sbjct: 919 CLEAP---KLKNGMYEGS---------ALIKNA--GKFVLLQKMLRKLK-DGGHRVLIFS 963
Query: 678 NYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGI 737
T LD++E C Y R+DG++ +RQ +DR+N P ++F+FLLS++AGG GI
Sbjct: 964 QMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGI 1023
Query: 738 NLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMS 797
NL A+ +I+ D DWNP D QA +R R GQK IYRF++ G++EE+I KM
Sbjct: 1024 NLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKML 1083
Query: 798 LSSCVV 803
L+ VV
Sbjct: 1084 LTHLVV 1089
>At2g25170 [R] KOG0383 Predicted helicase
Length = 1359
Score = 220 bits (561), Expect = 7e-57
Identities = 151/493 (30%), Positives = 249/493 (49%), Gaps = 61/493 (12%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGP--- 385
I+ADEMGLGKT+Q +AL+ ++ ++ ++ +++ P S + NW E W
Sbjct: 295 ILADEMGLGKTIQSIALLASLFEE------NLIPHLVIAPLSTLRNWEREFATWAPQMNV 348
Query: 386 ----GSLSSLAI----------DGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDT 431
G+ + A+ D KK S S + + I VL+ SY+
Sbjct: 349 VMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSES-----KQKRIKFDVLLTSYEM 403
Query: 432 LRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFA 491
+ + LK + M+ DEGHRLKN DS F++L R++L+GTP+QN+L E F
Sbjct: 404 INLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFM 463
Query: 492 LLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTN 551
L++F + G GS +F++ F+ + +E+++ +L +++ ++RR
Sbjct: 464 LMHFLDAGKFGSLEEFQEEFK--------DINQEEQIS-------RLHKMLAPHLLRRVK 508
Query: 552 NILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGL-LKKLCN 610
+ K +P K E ++ ++L+ Q+ Y+ KG + L I + L+K+C
Sbjct: 509 KDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGAQISLNNIMMELRKVCC 568
Query: 611 HPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESN 670
HP +LE G E +I D ++ + ++++ K +L + + K+K E
Sbjct: 569 HPYMLE------GVEPVIHDANEAF--------KQLLESC--GKLQLLDKMMVKLK-EQG 611
Query: 671 DKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSS 730
++++ + + LDL+E C + R+DG + +RQ +DRFN +F FLLS+
Sbjct: 612 HRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLST 671
Query: 731 KAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQ 790
+AGG GINL A+ +I+ D DWNP AD QA+AR R GQ IYR I+ GTIEE++ Q
Sbjct: 672 RAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQ 731
Query: 791 RQSMKMSLSSCVV 803
KM L VV
Sbjct: 732 LTKKKMVLEHLVV 744
>7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1638
Score = 219 bits (559), Expect = 1e-56
Identities = 160/541 (29%), Positives = 266/541 (48%), Gaps = 75/541 (13%)
Query: 286 EKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLAL 345
EK QA + G+ E + L+ ++ + N+ N I+ADEMGLGKT+Q ++L
Sbjct: 759 EKVVEQASIMVNGTLK--EYQIKGLEWLVSLYNNNLNG-----ILADEMGLGKTIQTISL 811
Query: 346 MWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNV 405
+ ++ + ++ + +I+ P S + NW E +KW
Sbjct: 812 VTYLMDR----KKVMGPYLIIVPLSTLPNWVLEFEKW--------------------APA 847
Query: 406 ADSVSHWASAQGRNIVKP--------VLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKN 457
VS+ S QGR +++ VL+ +Y+ + ++ L + M+ DEGHR+KN
Sbjct: 848 VGVVSYKGSPQGRRLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKN 907
Query: 458 AD-SLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPIL 516
LT P R++L+GTP+QN L E +ALLNF P + S + F + F P
Sbjct: 908 HHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFA 967
Query: 517 QSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQS 576
+ + + +EE T+ +R+L ++ F++RR + LP K E++I +++ Q+
Sbjct: 968 TTGEKVELNEEETILI--IRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRV 1025
Query: 577 LYQHFIESRAVK--------KIVKGDSNQPLKAIGLLKKLCNHPDLLELSE----DIPGS 624
LY+H ++S+ V K KG + + I L+KLCNHP + + E D G
Sbjct: 1026 LYKH-MQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGG 1084
Query: 625 EELI--PDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQT 682
++ PD Y+ S KF +L R L K+K +N +++L TQ
Sbjct: 1085 HGVVSGPDLYR-----------------VSGKFELLDRILPKLKA-TNHRVLLFCQMTQC 1126
Query: 683 LDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGA 742
+ +IE +G LRLDGT R +L+ +FN F+FLLS++AGG G+NL A
Sbjct: 1127 MTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTA 1186
Query: 743 NRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCV 802
+ +++ D DWNP D QA R R GQ+ + + R ++ ++EE+I K+++ V
Sbjct: 1187 DTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKV 1246
Query: 803 V 803
+
Sbjct: 1247 I 1247
>Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1647
Score = 219 bits (558), Expect = 1e-56
Identities = 168/575 (29%), Positives = 271/575 (46%), Gaps = 65/575 (11%)
Query: 286 EKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLAL 345
E+ D Q+ + G + + L+ ++ + N+ N I+ADEMGLGKT+Q +AL
Sbjct: 740 ERVDKQSALMVNGVLKQYQ--IKGLEWLVSLYNNNLNG-----ILADEMGLGKTIQTIAL 792
Query: 346 MWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNV 405
+ +++ +R +I+ P S ++NWA E DKW P +
Sbjct: 793 ITYLMEH----KRINGPFLIIVPLSTLSNWAYEFDKW-APSVVK---------------- 831
Query: 406 ADSVSHWASAQGRNIVKP--------VLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKN 457
VS+ S R P VL+ +Y+ + ++ L M+ DEGHR+KN
Sbjct: 832 ---VSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN 888
Query: 458 AD-SLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPIL 516
LT PRR++L+GTP+QN L E +ALLNF P + S + F + F P
Sbjct: 889 HHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA 948
Query: 517 QSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQS 576
+ + + +EE T+ +R+L ++ F++RR + LP K E+VI +++ Q+
Sbjct: 949 MTGEKVDLNEEETILI--IRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRV 1006
Query: 577 LYQHF-------IESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIP 629
LY+H + K KG + + I L+K+CNHP + + E+ SE L
Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE-SFSEHL-- 1063
Query: 630 DDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKM 689
+ + R+ S KF +L R L K++ +N K++L T + ++E
Sbjct: 1064 -GFTGGIVQGLDLYRA------SGKFELLDRILPKLRA-TNHKVLLFCQMTSLMTIMEDY 1115
Query: 690 CFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLD 749
+ LRLDGT R L+ FN+P + FIFLLS++AGG G+NL A+ +I+ D
Sbjct: 1116 FAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFD 1175
Query: 750 PDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDV 809
DWNP D QA R R GQ+ + + R + ++EEKI K++ VD+K
Sbjct: 1176 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLN-----VDQKVIQ 1230
Query: 810 ERLFSSDNLKQLFKLDTKTICDTHETYNCKRCKNG 844
+F + + + I + E + C G
Sbjct: 1231 AGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTG 1265
>Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1568
Score = 219 bits (557), Expect = 2e-56
Identities = 158/526 (30%), Positives = 265/526 (50%), Gaps = 44/526 (8%)
Query: 286 EKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLAL 345
E+ + Q+ I G+ + + L+ ++ + N+ N I+ADEMGLGKT+Q +AL
Sbjct: 706 ERVEKQSALLINGTLKHYQ--LQGLEWMVSLYNNNLNG-----ILADEMGLGKTIQTIAL 758
Query: 346 MWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNV 405
+ +++ +R +I+ P S ++NW E DKW S+ ++ G + +
Sbjct: 759 ITYLMEH----KRLNGPYLIIVPLSTLSNWTYEFDKWAP--SVVKISYKGTPAMRRS--- 809
Query: 406 ADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNAD-SLTFT 464
Q R+ VL+ +Y+ + ++ L M+ DEGHR+KN LT
Sbjct: 810 -------LVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 862
Query: 465 ALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLAT 524
PRR++L+GTP+QN L E +ALLNF P + S + F + F P + + +
Sbjct: 863 LNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDL 922
Query: 525 DEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHF--- 581
+EE T+ +R+L ++ F++RR + LP K E+VI +++ Q+ LY+H
Sbjct: 923 NEEETILI--IRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 980
Query: 582 ----IESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVD 637
+ K KG + + I L+K+CNHP + + E+ +E L Y + V
Sbjct: 981 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEE-SFAEHL---GYSNGVI 1036
Query: 638 SRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGV 697
+ R+ S KF +L R L K++ +N +++L T + ++E ++
Sbjct: 1037 NGAELYRA------SGKFELLDRILPKLRA-TNHRVLLFCQMTSLMTIMEDYFAFRNFLY 1089
Query: 698 LRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAAD 757
LRLDGT R L+ +FN+P Q FIFLLS++AGG G+NL A+ +++ D DWNP D
Sbjct: 1090 LRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQD 1149
Query: 758 QQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV 803
QA R R GQ+ + + R + ++EEKI K+++ V+
Sbjct: 1150 LQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1195
>Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1586
Score = 219 bits (557), Expect = 2e-56
Identities = 158/526 (30%), Positives = 265/526 (50%), Gaps = 44/526 (8%)
Query: 286 EKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLAL 345
E+ + Q+ I G+ + + L+ ++ + N+ N I+ADEMGLGKT+Q +AL
Sbjct: 706 ERVEKQSALLINGTLKHYQ--LQGLEWMVSLYNNNLNG-----ILADEMGLGKTIQTIAL 758
Query: 346 MWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNV 405
+ +++ +R +I+ P S ++NW E DKW S+ ++ G + +
Sbjct: 759 ITYLMEH----KRLNGPYLIIVPLSTLSNWTYEFDKWAP--SVVKISYKGTPAMRRS--- 809
Query: 406 ADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNAD-SLTFT 464
Q R+ VL+ +Y+ + ++ L M+ DEGHR+KN LT
Sbjct: 810 -------LVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 862
Query: 465 ALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLAT 524
PRR++L+GTP+QN L E +ALLNF P + S + F + F P + + +
Sbjct: 863 LNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDL 922
Query: 525 DEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHF--- 581
+EE T+ +R+L ++ F++RR + LP K E+VI +++ Q+ LY+H
Sbjct: 923 NEEETILI--IRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 980
Query: 582 ----IESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVD 637
+ K KG + + I L+K+CNHP + + E+ +E L Y + V
Sbjct: 981 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEE-SFAEHL---GYSNGVI 1036
Query: 638 SRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGV 697
+ R+ S KF +L R L K++ +N +++L T + ++E ++
Sbjct: 1037 NGAELYRA------SGKFELLDRILPKLRA-TNHRVLLFCQMTSLMTIMEDYFAFRNFLY 1089
Query: 698 LRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAAD 757
LRLDGT R L+ +FN+P Q FIFLLS++AGG G+NL A+ +++ D DWNP D
Sbjct: 1090 LRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQD 1149
Query: 758 QQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV 803
QA R R GQ+ + + R + ++EEKI K+++ V+
Sbjct: 1150 LQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1195
>YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1867
Score = 218 bits (556), Expect = 3e-56
Identities = 168/547 (30%), Positives = 264/547 (47%), Gaps = 63/547 (11%)
Query: 329 IMADEMGLGKTLQCLALMWT---MLKQGPQGRRSIDK----CIIVCPSSLVNNWANEIDK 381
I+ D+MGLGKTLQ + ++ + + K+ + RS++ +I+CP SL +W NE D+
Sbjct: 1294 ILCDDMGLGKTLQTICIIASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQ 1353
Query: 382 WLGPGSLSSLAIDGKKSSLN-NGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLK 440
+ P + G L ++D+ +++ SYD R ++ L
Sbjct: 1354 Y-APFLKVVVYAGGPTVRLTLRPQLSDA--------------DIIVTSYDVARNDLAVLN 1398
Query: 441 NCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGL 500
E + DEGH +KN+ S A+ I R+IL+GTPIQN++ E ++L +F PG
Sbjct: 1399 KTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGF 1458
Query: 501 LGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPC 560
LG+ F++ F PI SR+S + +E G L L V F++RR + LP
Sbjct: 1459 LGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPP 1518
Query: 561 KYEHVIFINLTPFQQSLYQHFI--ESRAVKKIVK----GDSNQPL-KAIGLLKKLCNHPD 613
K + L Q+ LY F + V+K ++ D Q + +A+ ++KLCNHP
Sbjct: 1519 KIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPA 1578
Query: 614 LLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKI-------- 665
L+ LS + P ++ Q+ +D N + K S L L++
Sbjct: 1579 LV-LSPNHPQLAQVQDYLKQTGLDLHDIIN--------APKLSALRTLLFECGIGEEDID 1629
Query: 666 KTESNDKIVLISN------------YTQTLDLIEKMCFSNH---YGVLRLDGTMNINKRQ 710
K S D+ I N LD++E F + +RLDG+++ RQ
Sbjct: 1630 KKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQ 1689
Query: 711 KLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQK 770
K+V +FN+ + + LL++K GG G+NL GA+ +I ++ DWNP D QA+ R R GQK
Sbjct: 1690 KVVRKFNEDPSIDCL-LLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQK 1748
Query: 771 KDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTKTIC 830
K +YR I+ GT+EEKI Q KM+++S VV+++ + L LF D T
Sbjct: 1749 KVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVNQQNSGLASMDTHQLLDLFDPDNVTSQ 1808
Query: 831 DTHETYN 837
D E N
Sbjct: 1809 DNEEKNN 1815
>Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1953
Score = 218 bits (556), Expect = 3e-56
Identities = 144/483 (29%), Positives = 239/483 (48%), Gaps = 39/483 (8%)
Query: 328 CIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGS 387
CI+ADEMGLGKT+Q +A + + G G +++ P S + NW E + W
Sbjct: 204 CILADEMGLGKTIQSIAFLQEVYNVGIHG-----PFLVIAPLSTITNWEREFNTWT---E 255
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP----VLIISYDTLRRNVEQLKNCE 443
++++ G +S + + ++GR I LI +++ + + +L+ E
Sbjct: 256 MNTIVYHGSLASRQM--IQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIE 313
Query: 444 VGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGS 503
++ DE HRLKN + +L + +V+L+GTP+QN + E F+LL+F P S
Sbjct: 314 WRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 373
Query: 504 RNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYE 563
++F K+F L T+E+V ++L I+ ++RR + K L K E
Sbjct: 374 ESEFLKDF--------GDLKTEEQV-------QKLQAILKPMMLRRLKEDVEKNLAPKQE 418
Query: 564 HVIFINLTPFQQSLYQHFIESR-AVKKIVKGDSNQP--LKAIGLLKKLCNHPDLLELSED 620
+I + LT Q+ Y+ +E + G +N P L + L+K CNHP L+
Sbjct: 419 TIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLIN---- 474
Query: 621 IPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYT 680
G+EE I +++ + + K ++ + L K+K + K+++ S
Sbjct: 475 --GAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGH-KVLIFSQMV 531
Query: 681 QTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLI 740
+ LD++E Y R+DG + N RQ +DRF+ P+ F+FLL ++AGG GINL
Sbjct: 532 RCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT 591
Query: 741 GANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSS 800
A+ I+ D DWNP D QA AR R GQ K +YR I+ + E ++F + S+K+ L
Sbjct: 592 AADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 651
Query: 801 CVV 803
V+
Sbjct: 652 AVL 654
>Hs20533808 [R] KOG0383 Predicted helicase
Length = 1954
Score = 218 bits (556), Expect = 3e-56
Identities = 151/487 (31%), Positives = 247/487 (50%), Gaps = 47/487 (9%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT+Q + ++++ K+G S ++ P S + NW E + W +
Sbjct: 722 ILADEMGLGKTVQTIVFLYSLYKEG----HSKGPYLVSAPLSTIINWEREFEMWAPDFYV 777
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP---------VLIISYDTLRRNVEQL 439
+ D + S+ N S A G+ + + VL+ SY+ + + L
Sbjct: 778 VTYTGDKESRSVIRENEF-SFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAIL 836
Query: 440 KNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPG 499
+ E ++ DE HRLKN S F L+S + +++L+GTP+QN+L E F LLNF P
Sbjct: 837 GSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPE 896
Query: 500 LLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLP 559
+ F + F +++ +D++++L +++ ++RR + K +P
Sbjct: 897 RFNNLEGFLEEFA--------------DISK-EDQIKKLHDLLGPHMLRRLKADVFKNMP 941
Query: 560 CKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQP--LKAIGLLKKLCNHPDLLEL 617
K E ++ + L+ Q+ Y+ + KG NQ L + LKK CNHP L +
Sbjct: 942 AKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPV 1001
Query: 618 SEDIPGSEELIPD-DYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLI 676
+ ++P+ Y S S++++ S K +L + L K++ E + ++++
Sbjct: 1002 AAV---EAPVLPNGSYDGS---------SLVKS--SGKLMLLQKMLKKLRDEGH-RVLIF 1046
Query: 677 SNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCG 736
S T+ LDL+E Y R+DG + RQ+ +DRFN P Q+F FLLS++AGG G
Sbjct: 1047 SQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1106
Query: 737 INLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKM 796
INL A+ +I+ D DWNP D QA +R R GQ K IYRF++ ++EE+I Q KM
Sbjct: 1107 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1166
Query: 797 SLSSCVV 803
L+ VV
Sbjct: 1167 MLTHLVV 1173
>CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 971
Score = 218 bits (556), Expect = 3e-56
Identities = 146/524 (27%), Positives = 259/524 (48%), Gaps = 59/524 (11%)
Query: 291 QADSNITGSKSPVETDVSSLKDVIKINEN---SRNRGAYGCIMADEMGLGKTLQCLALMW 347
++D + KSP + ++D N S I+ADEMGLGKTLQ ++++
Sbjct: 75 KSDDLVIFDKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIG 134
Query: 348 TMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVAD 407
M + +++ P S + NWANE KW S++++ + G +++ N
Sbjct: 135 YMKHY----KNKASPHLVIVPKSTLQNWANEFKKWCP--SINAVVLIGDEAARNQVL--- 185
Query: 408 SVSHWASAQGRNIVKP----VLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTF 463
R+++ P V +Y+ + + QLK ++ DE HR+KN S
Sbjct: 186 ----------RDVILPQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLS 235
Query: 464 TALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLA 523
+ + R++++GTP+QN+L E +ALLNF P + S +DF DS
Sbjct: 236 ETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDF------------DSWF 283
Query: 524 TDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFI- 582
+++ ++ D +++L ++ F++RR + + K L K E +++ L+ Q+ Y +
Sbjct: 284 SNDAMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLM 343
Query: 583 -ESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTS 641
+ + K + + + + L+K NHP L + +E P + D
Sbjct: 344 KDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPGP----------PFTTDQHLV 393
Query: 642 RNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLD 701
N S K VL + L K K E ++++ S +++ LDL+E C+ HY RLD
Sbjct: 394 DN--------SGKMVVLDKLLMKFK-EQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLD 444
Query: 702 GTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQAL 761
G+ R ++ +N P+ ++FIF+L+++AGG GINL A+ +I+ D DWNP +D QA+
Sbjct: 445 GSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAM 504
Query: 762 ARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDE 805
R R GQKK ++R I+ T++E+I ++ K+ L + V+ +
Sbjct: 505 DRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQ 548
>SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1373
Score = 217 bits (553), Expect = 6e-56
Identities = 150/483 (31%), Positives = 238/483 (49%), Gaps = 49/483 (10%)
Query: 329 IMADEMGLGKTLQCLA----LMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLG 384
I+ADEMGLGKT+Q + L+ ++ + GP +IV P S V W + W
Sbjct: 412 ILADEMGLGKTVQTVCFLSYLVHSLKQHGP--------FLIVVPLSTVPAWQETLANWTP 463
Query: 385 PGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEV 444
L+S+ G S N + S R + +L+ +Y+ + ++ ++L N
Sbjct: 464 --DLNSICYTGNTESRAN---IREYEFYLSTNSRKLKFNILLTTYEYILKDKQELNNIRW 518
Query: 445 GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSR 504
+ DE HRLKN++S + L R R++++GTP+QN+L E +L+NF PG R
Sbjct: 519 QYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVNFLMPGKFYIR 578
Query: 505 NDFRKNFELPIL-QSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYE 563
++ NF+ P Q RD +R L + FI+RR + K LP K E
Sbjct: 579 DEL--NFDQPNAEQERD--------------IRDLQERLQPFILRRLKKDVEKSLPSKSE 622
Query: 564 HVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGL---LKKLCNHPDLLELSED 620
++ + L+ Q Y++ + D L + + LKK+ NHP L
Sbjct: 623 RILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVELKKVSNHPYLF----- 677
Query: 621 IPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYT 680
PG+ E +R R +I S K +L + L ++K + + ++++ S
Sbjct: 678 -PGAAEKW---MMGRKMTREDTLRGIIMN--SGKMVLLDKLLQRLKHDGH-RVLIFSQMV 730
Query: 681 QTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLI 740
+ L+++ + Y RLDGT+ + R+ +D FN P+ +F+FLLS++AGG GINL
Sbjct: 731 RMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLN 790
Query: 741 GANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSS 800
A+ +I+ D DWNP AD QA+AR R GQK +YRF+S T+EE I +R KM L
Sbjct: 791 TADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEY 850
Query: 801 CVV 803
++
Sbjct: 851 AII 853
>YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1129
Score = 216 bits (551), Expect = 1e-55
Identities = 151/544 (27%), Positives = 267/544 (48%), Gaps = 67/544 (12%)
Query: 273 DAKTVLDSSSQSMEKADTQ---ADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCI 329
DA+ + + S E + Q + + + G P + + + ++ +++N I
Sbjct: 166 DAELLKEEDSDDDESIEFQFRESPAYVNGQLRPYQ--IQGVNWLVSLHKNK-----IAGI 218
Query: 330 MADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKC----IIVCPSSLVNNWANEIDKWLGP 385
+ADEMGLGKTLQ ++ + + R I+K +++ P S +NNW EI++W
Sbjct: 219 LADEMGLGKTLQTISFLGYL--------RYIEKIPGPFLVIAPKSTLNNWLREINRW--T 268
Query: 386 GSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVG 445
+++ + G K + + + V+I SY+ + R LK
Sbjct: 269 PDVNAFILQGDK---------EERAELIQKKLLGCDFDVVIASYEIIIREKSPLKKINWE 319
Query: 446 LMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRN 505
++ DE HR+KN +S+ L R++++GTP+QN+L E +ALLNF P +
Sbjct: 320 YIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQ 379
Query: 506 DFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHV 565
DF F S +S D++ ++QL ++ F++RR + + L K E
Sbjct: 380 DFDDWF------SSESTEEDQDKI-----VKQLHTVLQPFLLRRIKSDVETSLLPKKELN 428
Query: 566 IFINLTPFQQSLYQHFIES--RAV--KKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDI 621
+++ ++ Q+ Y+ +E AV K + L + L+K CNHP L + +E
Sbjct: 429 LYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPG 488
Query: 622 PGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQ 681
P + D N ++K VL + L K+K E ++++ S ++
Sbjct: 489 P----------PYTTDEHLVYN--------AAKLQVLDKLLKKLK-EEGSRVLIFSQMSR 529
Query: 682 TLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIG 741
LD++E C+ +Y R+DG+ R + +D +N P+ ++F+FLL+++AGG GINL
Sbjct: 530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTS 589
Query: 742 ANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSC 801
A+ ++L D DWNP AD QA+ R R GQKK ++R ++ ++EEKI +R + K+ L
Sbjct: 590 ADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQL 649
Query: 802 VVDE 805
V+ +
Sbjct: 650 VIQQ 653
>Hs4557451 [R] KOG0383 Predicted helicase
Length = 1944
Score = 216 bits (549), Expect = 2e-55
Identities = 146/485 (30%), Positives = 238/485 (48%), Gaps = 43/485 (8%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGP--- 385
I+ADEMGLGKT+Q + ++++ K+G + ++ P S + NW E W
Sbjct: 758 ILADEMGLGKTIQTIVFLYSLYKEG----HTKGPFLVSAPLSTIINWEREFQMWAPKFYV 813
Query: 386 ----GSLSSLAIDGKKS-SLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLK 440
G S AI + S + + + + + VL+ SY+ + + L
Sbjct: 814 VTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALG 873
Query: 441 NCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGL 500
+ ++ DE HRLKN S F L+ + +++L+GTP+QN+L E F LLNF P
Sbjct: 874 SIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPER 933
Query: 501 LGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPC 560
+ F + F +++ +D++++L +++ ++RR + K +P
Sbjct: 934 FNNLEGFLEEFA--------------DISK-EDQIKKLHDLLGPHMLRRLKADVFKNMPA 978
Query: 561 KYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQP--LKAIGLLKKLCNHPDLLELS 618
K E ++ + L+P Q+ Y++ + +G NQ L + LKK CNHP L ++
Sbjct: 979 KTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVA 1038
Query: 619 EDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISN 678
S +L Y+ ++S K +L + L K+K E ++++ S
Sbjct: 1039 A--MESPKLPSGAYEGGALIKSS-----------GKLMLLQKMLRKLK-EQGHRVLIFSQ 1084
Query: 679 YTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGIN 738
T+ LDL+E Y R+DG + RQ+ +DRFN P Q+F FLLS++AGG GIN
Sbjct: 1085 MTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGIN 1144
Query: 739 LIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSL 798
L A+ +I+ D DWNP D QA +R R GQ IYRF++ ++EE+I Q KM L
Sbjct: 1145 LATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1204
Query: 799 SSCVV 803
+ VV
Sbjct: 1205 THLVV 1209
>Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1739
Score = 216 bits (549), Expect = 2e-55
Identities = 144/492 (29%), Positives = 247/492 (49%), Gaps = 46/492 (9%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT+Q ++ + + Q + +IV P S + +W E + W +
Sbjct: 506 ILADEMGLGKTIQTISFLSYLFHQ----HQLYGPFLIVVPLSTLTSWQREFEIWAP--EI 559
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLML 448
+ + G S N + W +Q + + LI +Y+ L ++ L + +
Sbjct: 560 NVVVYIGDLMSRNTIREYE----WIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLG 615
Query: 449 ADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFR 508
DE HRLKN DSL + L + R++++GTP+QN L E ++LL+F P + +F
Sbjct: 616 VDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP----EKFEFW 671
Query: 509 KNFELPILQSRDSLATDEEVTLGKDR-LRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIF 567
++FE E+ G++ + L ++ F++RR + K LP K E ++
Sbjct: 672 EDFE-------------EDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILR 718
Query: 568 INLTPFQQSLYQHFIES--RAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSE 625
+ ++ Q+ Y+ + +A+ K +G ++ L + LKK CNH L++ E+
Sbjct: 719 VEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE----- 773
Query: 626 ELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDL 685
++ ++ + S RS S K +L + L +++ N ++++ S + LD+
Sbjct: 774 ----NERENGQEILLSLIRS------SGKLILLDKLLTRLRERGN-RVLIFSQMVRMLDI 822
Query: 686 IEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRL 745
+ + HY RLDG++ R++ +D FN ++F FLLS++AGG GINL A+ +
Sbjct: 823 LAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTV 882
Query: 746 ILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDE 805
++ D DWNP D QA AR R GQKK IYR ++ GT+EE+I +R KM L V+
Sbjct: 883 VIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQR 942
Query: 806 KEDVERLFSSDN 817
+ R +N
Sbjct: 943 MDTTGRTILENN 954
>CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1336
Score = 215 bits (547), Expect = 3e-55
Identities = 144/484 (29%), Positives = 240/484 (48%), Gaps = 48/484 (9%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT+Q +A + +++ +++ +++ P S V NW NE DKW ++
Sbjct: 388 ILADEMGLGKTIQTIAFITYLMEI----KKTSGPFLVIVPLSTVPNWQNEFDKWAA--NV 441
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP--------VLIISYDTLRRNVEQLK 440
+A G K + R + +P VL+ +++ + R L
Sbjct: 442 HLIAYKGPKET------------------RKVFEPIIKSGKFNVLLTTFEYVIREKALLG 483
Query: 441 NCEVGLMLADEGHRLKNAD-SLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPG 499
M+ DEGHRLKN LT +C RR++++GTP+QN L E +ALLNF P
Sbjct: 484 KLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTPLQNKLPELWALLNFLLPS 543
Query: 500 LLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLP 559
+ S + F + F P + + + +E T+ +R+L ++ F++RR + LP
Sbjct: 544 IFSSCSTFEQWFNAPFATTGEKVELTQEETMLI--IRRLHKVLRPFLLRRLKKEVESELP 601
Query: 560 CKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSE 619
K E V+ +++ Q+ LY+H + + S + L+KLCNHP L E E
Sbjct: 602 DKMEFVVRCDMSALQKVLYKHMQKGLLLDGKTNTGSKSLRNTMIHLRKLCNHPFLFENVE 661
Query: 620 DIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNY 679
+ + S+VD S K +L+R L K++ + ++++
Sbjct: 662 E--SCRNFWDARFISAVDLYR----------VSGKLELLSRILPKLQATGH-RVLMFFQM 708
Query: 680 TQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL 739
T + ++E LRLDG+ ++R L+D+FN P + F+F+LS++AGG G+NL
Sbjct: 709 TSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNL 768
Query: 740 IGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLS 799
A+ +I+ D DWNP D QA R R GQK + ++R I+ ++EEKI K+++
Sbjct: 769 QTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEKILAAARYKLNVD 828
Query: 800 SCVV 803
V+
Sbjct: 829 EKVI 832
>SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1199
Score = 214 bits (546), Expect = 4e-55
Identities = 166/542 (30%), Positives = 267/542 (48%), Gaps = 56/542 (10%)
Query: 273 DAKTVLDSSSQSMEKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMAD 332
D K + + ++ + T+ S + G K E + L+ +I + N N I+AD
Sbjct: 389 DRKIDYYNVAHNIREVVTEQPSILVGGKLK-EYQLRGLQWMISLYNNHLNG-----ILAD 442
Query: 333 EMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLA 392
EMGLGKT+Q ++L+ ++++ +R +++ P S + NW E ++W S+ +
Sbjct: 443 EMGLGKTIQTISLITHLIEK----KRQNGPFLVIVPLSTLTNWTMEFERWAP--SIVKIV 496
Query: 393 IDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEG 452
G V Q R+ VL+ +Y+ + ++ L + M+ DEG
Sbjct: 497 YKGPPQ----------VRKALHPQVRHSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEG 546
Query: 453 HRLKNADSLTFTALDSIRCPR-RVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNF 511
HR+KN S L + R R+IL+GTP+QN+L E +ALLNF P + S F + F
Sbjct: 547 HRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWF 606
Query: 512 ELPILQS--RDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFIN 569
P + +D + EE +L +R+L ++ F++RR + LP K E VI
Sbjct: 607 NTPFANTGGQDKMELTEEESLLV--IRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQ 664
Query: 570 LTPFQQSLYQH-------FIE-SRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDI 621
++ QQ LY ++E ++ K +KG N ++ LKK+CNHP + E
Sbjct: 665 MSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQ----LKKICNHPFVFE----- 715
Query: 622 PGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQ 681
D + S+D T N ++ S KF +L R L K+ S +I++ TQ
Sbjct: 716 ---------DVERSIDP-TGFNYDMLWRV-SGKFELLDRILPKL-FRSGHRILMFFQMTQ 763
Query: 682 TLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIG 741
++++E + LRLDG+ + R KL+ FNDP + +FLLS++AGG G+NL
Sbjct: 764 IMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQT 823
Query: 742 ANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSC 801
A+ +I+ D DWNP D QA R R GQ K+ IYR I+ ++EE I R K+ +
Sbjct: 824 ADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGK 883
Query: 802 VV 803
V+
Sbjct: 884 VI 885
>7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1861
Score = 214 bits (545), Expect = 5e-55
Identities = 151/524 (28%), Positives = 252/524 (47%), Gaps = 58/524 (11%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ D+MGLGKTLQ + ++ + +++CP +L +W E++K+L GS
Sbjct: 1310 ILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGS- 1368
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP-------VLIISYDTLRRNVEQLKN 441
V + ++ GR ++ +++ SYDT+R++++
Sbjct: 1369 ----------------VLRPLHYYGFPVGREKLRSDIGTKCNLVVASYDTVRKDIDFFSG 1412
Query: 442 CEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLL 501
+ DEGH +KN + + A+ ++ R+ILSGTPIQN++ E ++L +F PG L
Sbjct: 1413 IHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFL 1472
Query: 502 GSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCK 561
G+ F + F PIL SRD+ ++ +E G + L V F++RR + K LP K
Sbjct: 1473 GTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPK 1532
Query: 562 YEHVIFINLTPFQQSLYQHFIESRAVKKIVK-GDSNQP-------------LKAIGLLKK 607
+ L+P Q LY+ F + K GDS+ +A+ L+
Sbjct: 1533 ITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQN 1592
Query: 608 LCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYK--- 664
+CNHP L+ + SEEL Q ++ N S+ S+K L + L
Sbjct: 1593 VCNHPKLV-----LRQSEELTKVTSQLALS-----NSSLDDIEHSAKLPALKQLLLDCGI 1642
Query: 665 -IKTE--SNDKIVLISNYTQTLDLIEKMCFSNH---YGVLRLDGTMNINKRQKLVDRFND 718
++TE S + ++ LD++E+ H LRLDG++ ++RQ +V+ FN
Sbjct: 1643 GVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNS 1702
Query: 719 PEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRF 778
+ + LL++ GG G+NL GA+ +I ++ DWNP D QA+ R R GQKK +YR
Sbjct: 1703 DPSID-VLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRL 1761
Query: 779 ISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLF 822
I+ ++EEKI Q K+ ++ VV + + + + LF
Sbjct: 1762 ITRNSLEEKIMGLQKFKILTANTVVSAENASLQTMGTSQIFDLF 1805
>YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1703
Score = 214 bits (544), Expect = 6e-55
Identities = 157/533 (29%), Positives = 262/533 (48%), Gaps = 64/533 (12%)
Query: 287 KADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALM 346
K D + +I + + + L+ ++ + N N I+ADEMGLGKT+Q ++L+
Sbjct: 752 KEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNG-----ILADEMGLGKTIQTISLL 806
Query: 347 WTMLK----QGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNN 402
+ + +GP +++ P S ++NW++E KW +L +++ G +
Sbjct: 807 TYLYEMKNIRGPY--------LVIVPLSTLSNWSSEFAKWAP--TLRTISFKGSPNERKA 856
Query: 403 GNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADS-L 461
+ V++ +++ + + L + M+ DEGHR+KNA S L
Sbjct: 857 KQAKIRAGEF----------DVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKL 906
Query: 462 TFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQS--R 519
+ T R+IL+GTP+QN+L E +ALLNF P + S F + F P + +
Sbjct: 907 SLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQ 966
Query: 520 DSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQ 579
D + EE TL +R+L ++ F++RR + K LP K E V+ ++ QQ +YQ
Sbjct: 967 DKIELSEEETLLV--IRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQ 1024
Query: 580 HFIESRAVKKIVKGDSNQPLKAIGL---------LKKLCNHPDLLELSEDIPGSEELIPD 630
++ R ++ GD N K +GL LKK+CNHP + E ED
Sbjct: 1025 QMLKYR---RLFIGDQNNK-KMVGLRGFNNQIMQLKKICNHPFVFEEVED---------- 1070
Query: 631 DYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMC 690
++ N + + A KF +L R L K+K + ++++ TQ +D++E
Sbjct: 1071 ----QINPTRETNDDIWRVA--GKFELLDRILPKLKATGH-RVLIFFQMTQIMDIMEDFL 1123
Query: 691 FSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDP 750
+ LRLDG ++R +L+ FN P+ + F+LS++AGG G+NL A+ +I+ D
Sbjct: 1124 RYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDT 1183
Query: 751 DWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV 803
DWNP D QA R R GQK + I R I+T ++EE I +R K+ + V+
Sbjct: 1184 DWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVI 1236
>Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1054
Score = 213 bits (541), Expect = 1e-54
Identities = 158/518 (30%), Positives = 247/518 (47%), Gaps = 75/518 (14%)
Query: 307 VSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIV 366
+ L +I + EN N I+ADEMGLGKTLQ +AL+ + R +++
Sbjct: 188 IRGLNWLISLYENGVNG-----ILADEMGLGKTLQTIALLGYLKHY----RNIPGPHMVL 238
Query: 367 CPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP--- 423
P S ++NW NE +W+ SL + G K + +A R+ + P
Sbjct: 239 VPKSTLHNWMNEFKRWVP--SLRVICFVGDKDA-------------RAAFIRDEMMPGEW 283
Query: 424 -VLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPI 482
V + SY+ + + K ++ DE HR+KN S + + R++L+GTP+
Sbjct: 284 DVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPL 343
Query: 483 QNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRL-RQLSNI 541
QN+L E +ALLNF P + S +DF F D + LG +L +L +
Sbjct: 344 QNNLHELWALLNFLLPDVFNSADDFDSWF-------------DTKNCLGDQKLVERLHAV 390
Query: 542 VSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFI--ESRAVKKIVKGDSNQPL 599
+ F++RR + K LP K E I++ L+ Q+ Y + + + K D + L
Sbjct: 391 LKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL 450
Query: 600 KAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLA 659
+ L+K CNHP L + +E PG + S+ S K VL
Sbjct: 451 NILMQLRKCCNHPYLFDGAE--PGPPYTTDEHIVSN----------------SGKMVVLD 492
Query: 660 RFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQ--------- 710
+ L K+K E ++++ S T+ LD++E C Y RLDG +R+
Sbjct: 493 KLLAKLK-EQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFL 551
Query: 711 ---KLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRD 767
+ ++ FN P +FIF+LS++AGG GINL A+ +IL D DWNP D QA+ R R
Sbjct: 552 GQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 611
Query: 768 GQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDE 805
GQKK ++R I+ T+EE+I +R +K+ L S V+ +
Sbjct: 612 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQ 649
>7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1883
Score = 213 bits (541), Expect = 1e-54
Identities = 163/597 (27%), Positives = 270/597 (44%), Gaps = 88/597 (14%)
Query: 329 IMADEMGLGKTLQCLALMWTMLK----QGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLG 384
I+ADEMGLGKT+Q + ++++ K GP + V P S + W E D W
Sbjct: 550 ILADEMGLGKTIQTICFLYSLFKIHHLYGP--------FLCVVPLSTMTAWQREFDLWAP 601
Query: 385 PGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEV 444
++ + D K L W + + ++ +Y+ + ++ + L +
Sbjct: 602 DMNVVTYLGDIKSRELIQQY------EWQFESSKRLKFNCILTTYEIVLKDKQFLGTLQW 655
Query: 445 GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSR 504
+L DE HRLKN DSL + +L R++++GTP+QN L E +ALL+F P +
Sbjct: 656 AALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMP----DK 711
Query: 505 NDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEH 564
D +NFE+ + D G RL Q + +I+RR + K LP K E
Sbjct: 712 FDTWENFEVQHGNAEDK---------GYTRLHQQ---LEPYILRRVKKDVEKSLPAKVEQ 759
Query: 565 VIFINLTPFQQSLYQHFIESR--AVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSE-DI 621
++ + +T Q+ Y+ + A++K +G ++ L + LKK CNH L+ SE ++
Sbjct: 760 ILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFEL 819
Query: 622 PGSEELIPDDYQSSVDSRTSRNRSVIQTAF--SSKFSVLARFLYKIKTESNDKIVLISNY 679
G ++ +QT S K +L + L ++K E+ ++++ S
Sbjct: 820 MGLQQ-----------------DEALQTLLKGSGKLVLLDKLLCRLK-ETGHRVLIFSQM 861
Query: 680 TQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL 739
+ LD++ H+ RLDG++ R++ +D FN Q+F FLLS++AGG GINL
Sbjct: 862 VRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL 921
Query: 740 IGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLS 799
A+ +I+ D DWNP D QA AR R GQK IYR ++ ++EE+I +R KM L
Sbjct: 922 ATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLD 981
Query: 800 SCVVDEKEDVERL---------------FSSDNLKQLFKL------------DTKTICDT 832
V+ + R F+ D+L + K D +CD
Sbjct: 982 HLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFKDEQEHDDDLVCDI 1041
Query: 833 HETYNCKRCKNGKQILKAPVML----YGDATSWNHLNHDALAKTNDHLLKNEFNHKD 885
E +N + A +L ++ D+++K + + E + KD
Sbjct: 1042 DEILRRAETRNEDPEMPADDLLSAFKVASIAAFEEEPSDSVSKQDQNAAGEEDDSKD 1098
>CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1474
Score = 212 bits (539), Expect = 2e-54
Identities = 148/523 (28%), Positives = 259/523 (49%), Gaps = 40/523 (7%)
Query: 307 VSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIV 366
+ L+ ++ + N+ N I+ADEMGLGKT+Q ++L+ +++ +++ +++
Sbjct: 538 IKGLEWMVSLYNNNLNG-----ILADEMGLGKTIQTISLVTYLMEV----KQNNGPYLVI 588
Query: 367 CPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLI 426
P S ++NW NE KW S++++ G K + Q R VL+
Sbjct: 589 VPLSTLSNWQNEFAKWAP--SVTTIIYKGTKDARRR----------VEGQIRKGAFNVLM 636
Query: 427 ISYDTLRRNVEQLKNCEVGLMLADEGHRLKNAD-SLTFTALDSIRCPRRVILSGTPIQND 485
+Y+ + + L M+ DEGHRLKN + LT R++L+GTP+QN
Sbjct: 637 TTYEYVIKEKALLGKIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGTPLQNK 696
Query: 486 LSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKF 545
L E +ALLNF P + S F + F P + + + ++E T+ +R+L ++ F
Sbjct: 697 LPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETMLI--IRRLHKVLRPF 754
Query: 546 IIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLL 605
++RR + LP K E+VI + + Q+ +Y+H + + + + + + L
Sbjct: 755 LLRRLKKEVESQLPDKTEYVIKCDQSALQKVIYRHMQKGLLLDAKMSSGARSLMNTVVHL 814
Query: 606 KKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKI 665
+KLCNHP L P E+ ++ + + T R + K +L R L K+
Sbjct: 815 RKLCNHPFLF------PNIEDSCRAYWKVNEVNGTDLMR------VAGKLELLDRILPKL 862
Query: 666 KTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFI 725
K + +I++ T +++ E Y LRLDG+ ++R L+ +FN P F+
Sbjct: 863 KATGH-RILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFL 921
Query: 726 FLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIE 785
F+LS++AGG G+NL A+ +I+ D DWNP D QA R R GQKK+ + R I+ ++E
Sbjct: 922 FMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVE 981
Query: 786 EKIFQRQSMKMSLSSCVVDEKEDVERLFSSDN---LKQLFKLD 825
EKI K+++ V+ + +R ++ L+Q+ + D
Sbjct: 982 EKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQIIQAD 1024
>7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1027
Score = 209 bits (533), Expect = 1e-53
Identities = 156/542 (28%), Positives = 250/542 (45%), Gaps = 72/542 (13%)
Query: 307 VSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTML----KQGPQGRRSIDK 362
+ L +I + EN N I+ADEMGLGKTLQ ++L+ + + GP
Sbjct: 133 IRGLNWMISLYENGING-----ILADEMGLGKTLQTISLLGYLKHFKNQAGPH------- 180
Query: 363 CIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVK 422
I++ P S + NW NE KW SL ++ + G + + N R+++
Sbjct: 181 -IVIVPKSTLQNWVNEFKKWCP--SLRAVCLIGDQDTRNTFI-------------RDVLM 224
Query: 423 P----VLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILS 478
P V + SY+ R K ++ DE HR+KN S L + R++++
Sbjct: 225 PGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLIT 284
Query: 479 GTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQL 538
GTP+QN+L E +ALLNF P + S DF + F D+L T +L
Sbjct: 285 GTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALIT------------RL 332
Query: 539 SNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFI--ESRAVKKIVKGDSN 596
++ F++RR + K L K E IF+ L+ Q+ Y + + V K +
Sbjct: 333 HAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKM 392
Query: 597 QPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFS 656
+ + L+K NHP L + +E P + D+ N S K +
Sbjct: 393 RLQNILMQLRKCTNHPYLFDGAEPGP----------PYTTDTHLVYN--------SGKMA 434
Query: 657 VLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRF 716
+L + L K++ E ++++ S T+ LD++E C +Y RLDG R + + F
Sbjct: 435 ILDKLLPKLQ-EQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEF 493
Query: 717 NDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIY 776
N +F+F+LS++AGG GINL A+ +I+ D DWNP D QA+ R R GQKK ++
Sbjct: 494 NMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVF 553
Query: 777 RFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVE---RLFSSDNLKQLFKLDTKTICDTH 833
R I+ T+EEKI +R +K+ L V+ V+ + D + + + + +
Sbjct: 554 RLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSK 613
Query: 834 ET 835
ET
Sbjct: 614 ET 615
>ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1251
Score = 209 bits (531), Expect = 2e-53
Identities = 160/542 (29%), Positives = 253/542 (46%), Gaps = 75/542 (13%)
Query: 322 NRGAY--GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKC---IIVCPSSLVNNWA 376
NR Y CIMADEMGLGKT+Q + + T+ + D C ++V P S++ +W
Sbjct: 315 NRWYYKQSCIMADEMGLGKTVQSVTFINTLFTK-------YDYCAPVLVVTPLSIIPHWE 367
Query: 377 NEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNI---VKPVLIISYDTLR 433
E + W L K N A + + N+ + VLI +YDT+
Sbjct: 368 REFEAWTDLRVL--------KYHENRPGRALIAEYEFVLKKNNLEIRLFDVLITTYDTVM 419
Query: 434 RNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALL 493
E L + + DE HRLKNA S T L +++ +V+LSGTP+QN++SE ++LL
Sbjct: 420 AEQEHLSQFHFSVGIFDEAHRLKNAKSKAATILRTLKFNHKVLLSGTPLQNNISELWSLL 479
Query: 494 NFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNI 553
NF +P S F F++ + + +L ++ ++RR
Sbjct: 480 NFIDPMRFSSLPHFLGEFKMENIND----------------VEKLQGLLRPLMLRRMKED 523
Query: 554 LAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQP--LKAIGLLKKLCNH 611
+ K +P K E +I + LT Q+ Y+ +E G + P L + L+K C H
Sbjct: 524 VEKSIPTKEETIIEVALTMIQKRFYRAILEKNIEFLTKGGKESAPNLLNVMMELRKCCIH 583
Query: 612 PDLLELSED--IPG---------------------SEELIPDDYQ---SSVDSRTSRNRS 645
P L++ +E+ + G SE L D++Q S + +
Sbjct: 584 PYLIKGAEEQILSGYLKKKRERSKAEGAENDITLTSEVLNEDEHQDGNSVISDIDEYYKI 643
Query: 646 VIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMN 705
IQ+ S K +L + L K+K K+++ S T+ LDL+ + Y R+DG
Sbjct: 644 FIQS--SGKLVLLDKLLGKLK--DGHKVLIFSQMTRCLDLLAEYLAYRKYKYERIDGGAR 699
Query: 706 INKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVW 765
RQ +DRF+D F+FLLS++AGG GINL A+ +I+ D DWNP D QA AR
Sbjct: 700 TENRQAAIDRFSDKTSDVFVFLLSTRAGGVGINLTAADTVIIFDSDWNPQNDLQAQARCH 759
Query: 766 RDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD----EKEDVERLFSSDNLKQL 821
R GQ + +YR ++ T E ++F + +K+ L V+ E++ E+ D ++ L
Sbjct: 760 RIGQTSEVKVYRLVTENTYEREMFDKAGLKLGLDRAVLQKMTFEEQKSEKTRKKDAIETL 819
Query: 822 FK 823
+
Sbjct: 820 LR 821
>At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 764
Score = 209 bits (531), Expect = 2e-53
Identities = 157/576 (27%), Positives = 283/576 (48%), Gaps = 60/576 (10%)
Query: 261 RCVTGLVMKDFLDAKTVLD--SSSQSMEKADTQADSNITGSKSPVETDVSSLKDVIKINE 318
R V ++ + D +T+ + +++ K + +TG + + +K +I + +
Sbjct: 160 RAVAAMISRSKEDGETINSDLTEEETVIKLQNELCPLLTGGQLK-SYQLKGVKWLISLWQ 218
Query: 319 NSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANE 378
N N I+AD+MGLGKT+Q + + + G G +++ P S ++NW NE
Sbjct: 219 NGLNG-----ILADQMGLGKTIQTIGFLSHLKGNGLDG-----PYLVIAPLSTLSNWFNE 268
Query: 379 IDKWLGPGSLSSLAIDGKKSSLNNGNVADSV--SHWASAQGRNIVKPVLIISYDTLRRNV 436
I ++ S++++ G K N D + H G P++I SY+ +
Sbjct: 269 IARFTP--SINAIIYHGDK------NQRDELRRKHMPKTVGPKF--PIVITSYEVAMNDA 318
Query: 437 EQ-LKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNF 495
++ L++ ++ DEGHRLKN L ++ +++L+GTP+QN+LSE ++LLNF
Sbjct: 319 KRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNF 378
Query: 496 SNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILA 555
P + S ++F F+ ++++ +EE + +L I+ FI+RR +
Sbjct: 379 ILPDIFTSHDEFESWFDFSE-KNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKCDVE 437
Query: 556 KYLPCKYEHVIFINLTPFQQSLYQHFI----ESRAVKKIVKGDS--NQPLKAIGLLKKLC 609
LP K E +++ +T Q+ +H + E+ + ++G + + L+K C
Sbjct: 438 LSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQLRKNC 497
Query: 610 NHPDLLELSED----IPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKI 665
NHPDLL+ D P EE++ KF +L R L ++
Sbjct: 498 NHPDLLQGQIDGSYLYPPVEEIVGQ---------------------CGKFRLLERLLVRL 536
Query: 666 KTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFI 725
+N K+++ S +T+ LD+++ + V R+DG++ +++R++ + F+D + I
Sbjct: 537 FA-NNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSI 595
Query: 726 FLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIE 785
FLLS++AGG GINL A+ IL D DWNP D QA+ R R GQ K +YR + +IE
Sbjct: 596 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIE 655
Query: 786 EKIFQRQSMKMSLSSCVVDEKE-DVERLFSSDNLKQ 820
++ +R K+ L V+ + + ER SS L++
Sbjct: 656 TRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEE 691
>Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1709
Score = 207 bits (527), Expect = 6e-53
Identities = 138/483 (28%), Positives = 241/483 (49%), Gaps = 46/483 (9%)
Query: 328 CIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGS 387
CI+ADEMGLGKT+Q ++ + + + + ++V P S + +W EI W
Sbjct: 502 CILADEMGLGKTIQTISFLNYLFHE----HQLYGPFLLVVPLSTLTSWQREIQTWAS--Q 555
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLM 447
++++ G +N+ N+ + W Q + + +L+ +Y+ L ++ L +
Sbjct: 556 MNAVVYLG---DINSRNMIRT-HEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFI 611
Query: 448 LADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDF 507
DE HRLKN DSL + L + R++++GTP+QN L E ++LL+F P S DF
Sbjct: 612 GVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDF 671
Query: 508 RKNFELPILQSRDSLATDEEVTLGKDR-LRQLSNIVSKFIIRRTNNILAKYLPCKYEHVI 566
+EE G++ L + F++RR + K LP K E ++
Sbjct: 672 -----------------EEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQIL 714
Query: 567 FINLTPFQQSLYQHFIES--RAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGS 624
+ ++ Q+ Y+ + +A+ K KG ++ L + LKK CNH L++ ++
Sbjct: 715 RMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDN---- 770
Query: 625 EELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLD 684
+++ + ++ RS S K +L + L +++ N ++++ S + LD
Sbjct: 771 -----NEFYNKQEALQHLIRS------SGKLILLDKLLIRLRERGN-RVLIFSQMVRMLD 818
Query: 685 LIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANR 744
++ + + RLDG++ R++ +D FN ++F FLLS++AGG GINL A+
Sbjct: 819 ILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADT 878
Query: 745 LILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 804
+++ D DWNP D QA AR R GQKK IYR ++ G++EE I +R KM L V+
Sbjct: 879 VVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 938
Query: 805 EKE 807
+
Sbjct: 939 RMD 941
>SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 635
Score = 206 bits (524), Expect = 1e-52
Identities = 151/548 (27%), Positives = 256/548 (46%), Gaps = 69/548 (12%)
Query: 329 IMADEMGLGKTLQCLALMWT-------MLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDK 381
I+ D+MGLGKTLQ + ++ + + ++ + + +IVCPS+L +W E+
Sbjct: 62 ILCDDMGLGKTLQTICIVASDHYNRQKLFEESGSPKFAHVPSLIVCPSTLAGHWQQELST 121
Query: 382 WLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKN 441
+ +S+ G A+ A + + V++ SYD R +V++L
Sbjct: 122 YAPFLKVSAYV----------GPPAER----AKIRSKMKKSDVVVTSYDICRNDVDELVK 167
Query: 442 CEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLL 501
+ + DEGH +KNA + A+ S+R R+ILSGTPIQN++ E ++L +F PG L
Sbjct: 168 IDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFLMPGFL 227
Query: 502 GSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCK 561
G+ F++ F PI SRD+ ++ +E G L + V F++RR + LP K
Sbjct: 228 GTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLADLPPK 287
Query: 562 YEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQP--------------LKAIGLLKK 607
+ +++ Q+ L F+ + + ++ D + +A+ ++K
Sbjct: 288 IIQDYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKTQGTRKKKSQKAHIFQALQYMRK 347
Query: 608 LCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYK--- 664
LCNHP L+ L+E P + V N + + K + L + L
Sbjct: 348 LCNHPALI-LTEKHPKRNAI--------VKQLAKENSGLHDLKHAPKLTALGQLLRDCGL 398
Query: 665 --------------IKTESNDKIVLISNYTQTLDLIEK---MCFSNHYGVLRLDGTMNIN 707
S ++++ LD++EK +RLDG++
Sbjct: 399 GNSSVNSNGIDSALTNAVSEHRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPT 458
Query: 708 KRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRD 767
KRQ+ V +FN+ + + LL++ GG G+NL GA+ +I ++ DWNP D QA+ R R
Sbjct: 459 KRQEAVTKFNNDPSID-VLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRI 517
Query: 768 GQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTK 827
GQKK +YR I+ G +EEKI Q KM+++S VV+++ +D + LF
Sbjct: 518 GQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVVNQQNAGLSSIGTDQILDLF----N 573
Query: 828 TICDTHET 835
T D +T
Sbjct: 574 TTADEQQT 581
>SPBP35G2.10 [R] KOG0383 Predicted helicase
Length = 1418
Score = 205 bits (522), Expect = 2e-52
Identities = 143/478 (29%), Positives = 237/478 (48%), Gaps = 34/478 (7%)
Query: 328 CIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGS 387
CI+ADEMGLGKT+Q ++ + + R +++ P + V NW E+ KW
Sbjct: 577 CILADEMGLGKTVQVISFISVLFY-----RHKCFPVLVIVPHATVANWERELKKWA---- 627
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLM 447
L I+ S N ++ +++ VL+IS + R + L+ + ++
Sbjct: 628 -PFLQINVLVGSEKNRSLVRDYRLINQKDPKHVSTHVLVISASNVEREISLLRKFQWKVL 686
Query: 448 LADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDF 507
+ DEG RLKN S F L S++ +++L+GTP+QN++ E F LL F NP + +
Sbjct: 687 IVDEGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNVRELFNLLQFLNPMKINAAE-- 744
Query: 508 RKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIF 567
L+ R S+ E+VT +L I+ F +RR + + P K E +I
Sbjct: 745 --------LEKRYSIIDTEKVT-------ELHQILKPFFLRRVKSEVLDNFPTKVEVIIP 789
Query: 568 INLTPFQQSLYQHFIESR-AVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEE 626
+++TP Q+ LY+ + ++ + + G +N L N L++L + +
Sbjct: 790 LSMTPVQKGLYKSILSKNLSLLRNITGYANTSSSGGQRTTSLNNI--LMQLRKTLAHPYI 847
Query: 627 LIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLI 686
PD ++ + RS+ + S KF +L + K+ T + +I+L S + Q LD++
Sbjct: 848 YSPDIEDRNLPYELAM-RSLEEA--SCKFLILRLLVPKLITRGH-RILLFSQFIQQLDIL 903
Query: 687 EKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLI 746
E + R DG + +RQ +D FN P + FLLS++AGG GINL A+ +I
Sbjct: 904 EDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGVGINLASADTVI 963
Query: 747 LLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 804
+LDPD+NP D QA+AR R GQKK ++ + ++EEKI Q K+ L +V+
Sbjct: 964 ILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQNAQKKLVLDHLIVE 1021
>Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1026
Score = 205 bits (522), Expect = 2e-52
Identities = 156/514 (30%), Positives = 251/514 (48%), Gaps = 57/514 (11%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT+Q +A + + ++G G +IV P+S ++NW E++ W +L
Sbjct: 519 ILADEMGLGKTIQAIAFLAYLYQEGNNGPH-----LIVVPASTIDNWLREVNLWCP--TL 571
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQ---LKNCEVG 445
L G + + R V++ +Y+ + + + ++
Sbjct: 572 KVLCYYGSQEERKQIRF--------NIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLN 623
Query: 446 LMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRN 505
+ DEGH LKN S+ + L +I R++L+GTP+QN+L E +LLNF P + S
Sbjct: 624 YAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSST 683
Query: 506 DFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHV 565
E+ + S + + DE+ K+R+ I+ FI+RR + K LP K + +
Sbjct: 684 S-----EIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRI 738
Query: 566 IFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGL-LKKLCNHP------------ 612
++ Q+ LY +R K I + N + + + L+K+ NHP
Sbjct: 739 ELCAMSEKQEQLYLGLF-NRLKKSINNLEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKL 797
Query: 613 -DLLELSEDIPGSEELIPD----------DYQSSVDSRTSRNRSVIQTAF-----SSKFS 656
++ +L P E PD D++ V + R+ + Q S KF
Sbjct: 798 KEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDLILDSGKFR 857
Query: 657 VLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRF 716
VL L ++K + D++VL S +T LD++E + + + LRLDG I++R L+D F
Sbjct: 858 VLGCILSELK-QKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEF 916
Query: 717 NDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIY 776
N + F+FLLS+KAGG GINL AN +IL D D NP D+QA R R GQ K+ +
Sbjct: 917 NT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVI 975
Query: 777 RFISTGTIEEKIFQ--RQSMKMSLSSCVVDEKED 808
+ IS GTIEE + + +Q +K+ VDE ++
Sbjct: 976 KLISQGTIEESMLKINQQKLKLEQDMTTVDEGDE 1009
>At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1057
Score = 205 bits (521), Expect = 3e-52
Identities = 147/528 (27%), Positives = 258/528 (48%), Gaps = 71/528 (13%)
Query: 307 VSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLK-QGPQGRRSIDKCII 365
++ L +I++ EN N I+ADEMGLGKTLQ ++L+ + + +G G ++
Sbjct: 194 LAGLNWLIRLYENGING-----ILADEMGLGKTLQTISLLAYLHEYRGINGPH-----MV 243
Query: 366 VCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVL 425
V P S + NW NEI ++ V +V + + R ++ L
Sbjct: 244 VAPKSTLGNWMNEIRRFCP--------------------VLRAVKFLGNPEERRHIREDL 283
Query: 426 II---------SYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVI 476
++ S++ + L+ ++ DE HR+KN +SL + R++
Sbjct: 284 LVAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 343
Query: 477 LSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLR 536
++GTP+QN+L E +ALLNF P + S F + F++ S D++ + ++
Sbjct: 344 ITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQI-------SGENDQQ-----EVVQ 391
Query: 537 QLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSN 596
QL ++ F++RR + + K LP K E ++ + ++ Q+ Y+ ++ G+
Sbjct: 392 QLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERK 451
Query: 597 QPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFS 656
+ L L+K CNHP L + +E PG D ++ + K
Sbjct: 452 RLLNIAMQLRKCCNHPYLFQGAE--PGPPYTTGDHLITN----------------AGKMV 493
Query: 657 VLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRF 716
+L + L K+K E + ++++ S T+ LD++E Y R+DG ++R ++ +
Sbjct: 494 LLDKLLPKLK-ERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAY 552
Query: 717 NDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIY 776
N P ++F+FLLS++AGG GINL A+ +IL D DWNP D QA R R GQKK+ ++
Sbjct: 553 NKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 612
Query: 777 RFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKL 824
RF + IEEK+ +R K++L + V+ + E+ S N +L ++
Sbjct: 613 RFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKSKSVNKDELLQM 660
>SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1388
Score = 204 bits (519), Expect = 5e-52
Identities = 151/509 (29%), Positives = 248/509 (48%), Gaps = 54/509 (10%)
Query: 329 IMADEMGLGKTLQCLA----LMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLG 384
I+ADEMGLGKT+Q +A L ++ + GP ++V P S V W + W
Sbjct: 397 ILADEMGLGKTVQTVAFLSYLAHSLRQHGP--------FLVVVPLSTVPAWQETLALWAS 448
Query: 385 PGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEV 444
++ ++ G +S + D + Q I +L+ +Y+ + ++ L N +
Sbjct: 449 --DMNCISYLGNTTSRQV--IRDYEFYVDGTQ--KIKFNLLLTTYEYVLKDRSVLSNIKW 502
Query: 445 GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSR 504
M DE HRLKN++S + AL + R++++GTP+QN++ E AL++F PG R
Sbjct: 503 QYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALVDFLMPGKFEIR 562
Query: 505 NDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEH 564
+ N E P DEE + +R L + +I+RR + K LP K E
Sbjct: 563 EEI--NLEAP----------DEEQ---EAYIRSLQEHLQPYILRRLKKDVEKSLPSKSER 607
Query: 565 VIFINLTPFQQSLYQHFIESR---AVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDI 621
++ + L+ Q Y++ + + I G L + LKK NHP L +
Sbjct: 608 ILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVVELKKASNHPYLFD----- 662
Query: 622 PGSEELIPDDYQSSVDSRTSRNRSVIQTAFSS-KFSVLARFLYKIKTESNDKIVLISNYT 680
G EE + ++S+ R+ + +S K +L + L +++ + + ++++ S
Sbjct: 663 -GVEE----SWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGH-RVLIFSQMV 716
Query: 681 QTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLI 740
+ LD++ Y RLDGT+ R+ +D FN P +F+FLLS++AGG GINL+
Sbjct: 717 RMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLM 776
Query: 741 GANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSS 800
A+ +I+ D DWNP AD QA+AR R GQK +YR +S TIEE + +R KM L
Sbjct: 777 TADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEY 836
Query: 801 CVVD------EKEDVERLFSSDNLKQLFK 823
++ +K FS++ L + K
Sbjct: 837 AIISLGVTDKQKNSKNDKFSAEELSAILK 865
>CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1465
Score = 203 bits (516), Expect = 1e-51
Identities = 139/495 (28%), Positives = 238/495 (48%), Gaps = 53/495 (10%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQ----GPQGRRSIDKCIIVCPSSLVNNWANEIDKWLG 384
I+ADEMGLGKT+Q ++L+ ++ + GP ++V P S + W E +W
Sbjct: 427 ILADEMGLGKTIQSISLLASLFHRYDLAGPY--------LVVVPLSTMAAWQKEFAQWAP 478
Query: 385 PGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEV 444
+L D + W + + ++ +Y+ L ++ L + +
Sbjct: 479 EMNLVVYMGDVVSRDMIRQY------EWFVGGTKKMKINAILTTYEILLKDKAFLSSIDW 532
Query: 445 GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSR 504
+L DE HRLKN +SL + +L R +++++GTP+QN L E +ALL+F P +
Sbjct: 533 AALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMP----EK 588
Query: 505 NDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEH 564
D + FE +S + L + F++RR + K LP K E
Sbjct: 589 FDCWEEFETAHNESNHK------------GISALHKKLEPFLLRRVKKDVEKSLPPKTEQ 636
Query: 565 VIFINLTPFQQSLYQHFIES--RAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIP 622
++ +++T Q+ Y+ + R + K VKG N + + LKK CNH L
Sbjct: 637 ILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTR------ 690
Query: 623 GSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQT 682
Y D R + ++++ S K +L + L ++K + + ++++ S
Sbjct: 691 --------QYDHIYDDAQGRLQQLLKS--SGKLILLDKLLCRLKDKGH-RVLIFSQMVMM 739
Query: 683 LDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGA 742
LD++++ + RLDG+M + R++ +D +N P +F FLLS++AGG GINL A
Sbjct: 740 LDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATA 799
Query: 743 NRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCV 802
+ +I+ D DWNP D QA++R R GQ K IYR ++ G++EE+I +R K+ L V
Sbjct: 800 DTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLV 859
Query: 803 VDEKEDVERLFSSDN 817
+ + + S N
Sbjct: 860 IQRMDTTGKTVLSKN 874
>YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1131
Score = 202 bits (514), Expect = 2e-51
Identities = 174/576 (30%), Positives = 273/576 (47%), Gaps = 91/576 (15%)
Query: 309 SLKDVIKINENSRN---RGAYGCIMADEMGLGKTLQCLALMWTMLKQ----GPQGRRSID 361
SLKD + N N + CI+AD+MGLGKT Q ++ + LKQ GP
Sbjct: 571 SLKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISF-FAYLKQINEPGPH------ 623
Query: 362 KCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIV 421
++V PSS + NW E K+ +L I+ SL + RN
Sbjct: 624 --LVVVPSSTLENWLREFQKFA-----PALKIEPYYGSLQEREELRDILE------RNAG 670
Query: 422 K-PVLIISYDTLRRN---VEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVIL 477
K V++ +Y+ N V LKN +++ DEGH LKN+ S F L IR R++L
Sbjct: 671 KYDVIVTTYNLAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLL 730
Query: 478 SGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEE---VTLGKDR 534
+GTP+QN+L E +LL F P L S+ +++F+ I + R D + L ++
Sbjct: 731 TGTPLQNNLKELMSLLEFIMPNLFISK---KESFDA-IFKQRAKTTDDNKNHNPLLAQEA 786
Query: 535 LRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIE----------- 583
+ + ++ FI+RR + + K+LP K+ H+ + L Q+ +Y I+
Sbjct: 787 ITRAKTMMKPFILRRRKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKD 846
Query: 584 ---SRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLL----------ELSEDI--------P 622
+ K+ K S+ I L+K HP L ++S+ I
Sbjct: 847 GELPKDAKEKSKLQSSSSKNLIMALRKASLHPLLFRNIYNDKIITKMSDAILDEPAYAEN 906
Query: 623 GSEELIPDDYQSSVDSRTSR---------------NRSVIQTAFSSKFSVLARFLYKIKT 667
G++E I +D D + N +Q S K L + L I
Sbjct: 907 GNKEYIKEDMSYMTDFELHKLCCNFPNTLSKYQLHNDEWMQ---SGKIDALKKLLKTIIV 963
Query: 668 ESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFL 727
+ +K+++ S +TQ LD++E + + Y LRLDG+ +N RQ L+D+F + + IF+
Sbjct: 964 DKQEKVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIP-IFI 1022
Query: 728 LSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 787
LS+KAGG GINL+ AN +I+ D +NP D+QA R R GQ K+ I I+ +IEEK
Sbjct: 1023 LSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEK 1082
Query: 788 IFQRQSMKMSLSSCVVDEKEDVERLFS--SDNLKQL 821
I Q K++L S + ++K+ + L S SD L+ +
Sbjct: 1083 IHQLAKNKLALDSYISEDKKSQDVLESKVSDMLEDI 1118
>At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1053
Score = 201 bits (511), Expect = 4e-51
Identities = 153/518 (29%), Positives = 248/518 (47%), Gaps = 71/518 (13%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPG 386
G I+ D+MGLGKT+Q + + + + I + ++V P +L+ +W E L
Sbjct: 397 GGILGDDMGLGKTMQICSFLAGLFHS-----KLIKRALVVAPKTLLPHWMKE----LATV 447
Query: 387 SLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEV-- 444
LS + + +S + H +G +L+ +YD +R N + L+ +
Sbjct: 448 GLSQMTREYYGTSTKAREY--DLHHILQGKG------ILLTTYDIVRNNTKALQGDDHYT 499
Query: 445 ----------GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLN 494
M+ DEGH +KN ++ +L I R+I+SGTPIQN+L
Sbjct: 500 DEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKAL----- 554
Query: 495 FSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNIL 554
S N F++N+E IL+ D ATD E +G + L + F +RR + +
Sbjct: 555 --------SFNRFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFLRRLKSEV 606
Query: 555 ------AKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKL 608
L K E V+++ LT Q+ LY+ F+ S V G PL A+ +LKK+
Sbjct: 607 FGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFLNSEIVLSAFDGS---PLAALTILKKI 663
Query: 609 CNHPDLL--ELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIK 666
C+HP LL +ED+ + ++ V R + + + + F
Sbjct: 664 CDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAERLAMH--IADNVDTDDFQT--------- 712
Query: 667 TESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIF 726
ND I ++ + L++ + SN Y LR+DGT R K V+ F + IF
Sbjct: 713 --KNDSISCKLSFI--MSLLDSLT-SNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAP-IF 766
Query: 727 LLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEE 786
LL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQ KD +YR +++ T+EE
Sbjct: 767 LLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEE 826
Query: 787 KIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKL 824
KI+++Q K L + KE + R FS +L++LF L
Sbjct: 827 KIYRKQVYKGGLFKTATEHKEQI-RYFSQQDLRELFSL 863
>At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1063
Score = 200 bits (508), Expect = 9e-51
Identities = 144/531 (27%), Positives = 259/531 (48%), Gaps = 54/531 (10%)
Query: 307 VSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLK-QGPQGRRSIDKCII 365
++ L +I++ EN N I+ADEMGLGKTLQ ++L+ + + +G G ++
Sbjct: 186 LAGLNWLIRLYENGING-----ILADEMGLGKTLQTISLLAYLHEYRGINGPH-----MV 235
Query: 366 VCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVL 425
V P S + NW NEI ++ + L N + G+ +
Sbjct: 236 VAPKSTLGNWMNEIRRF--------CPVLRAVKFLGNPEERRHIREELLVAGK---FDIC 284
Query: 426 IISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQND 485
+ S++ + L+ ++ DE HR+KN +SL + R++++GTP+QN+
Sbjct: 285 VTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNN 344
Query: 486 LSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKF 545
L E +ALLNF P + S F + F++ S D++ + ++QL ++ F
Sbjct: 345 LHELWALLNFLLPEVFSSAETFDEWFQI-------SGENDQQ-----EVVQQLHKVLRPF 392
Query: 546 IIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLL 605
++RR + + K LP K E ++ + ++ Q+ Y+ ++ G+ + L L
Sbjct: 393 LLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQL 452
Query: 606 KKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKI 665
+K CNHP L + +E PG D ++ + K +L + L K+
Sbjct: 453 RKCCNHPYLFQGAE--PGPPYTTGDHLVTN----------------AGKMVLLDKLLPKL 494
Query: 666 KTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFI 725
K + + ++++ S T+ LD++E Y R+DG ++R ++ +N P ++F+
Sbjct: 495 K-DRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFV 553
Query: 726 FLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIE 785
FLLS++AGG GINL A+ +IL D DWNP D QA R R GQKK+ ++RF + IE
Sbjct: 554 FLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIE 613
Query: 786 EKIFQRQSMKMSLSSCVVDEKEDVE-RLFSSDNLKQLFKLDTKTICDTHET 835
K+ +R K++L + V+ + E + + D L Q+ + + + + ++
Sbjct: 614 AKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDS 664
>Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 838
Score = 199 bits (505), Expect = 2e-50
Identities = 168/576 (29%), Positives = 270/576 (46%), Gaps = 102/576 (17%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVC-PSSLVNNWANEIDKWLGPGS 387
I+ADEMGLGKT+QC+A + M+++G G +VC P S + NW E ++
Sbjct: 245 ILADEMGLGKTVQCIATIALMIQRGVPGP------FLVCGPLSTLPNWMAEFKRFTP--D 296
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLM 447
+ ++ G + V + +G + PV+I S++ R+ L++C +
Sbjct: 297 IPTMLYHGTQEERQK-----LVRNIYKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKYL 351
Query: 448 LADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDF 507
+ DEGHR+KN L +++L+GTP+QN+LSE ++LLNF P + F
Sbjct: 352 IVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSF 411
Query: 508 RKNFELPILQ--SRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAK--------- 556
F++ L + D +A + E + L L I++ F++RR + +A
Sbjct: 412 ESWFDITSLSETAEDIIAKEREQNV----LHMLHQILTPFLLRRLKSDVALEVPPKREVV 467
Query: 557 -YLPCKYEHVIF--------------------INLTPF-------QQSLYQHFIES---- 584
Y P + IF I L+P ++S+ I+
Sbjct: 468 VYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTGRPKRRTRKSINYSKIDDFPNE 527
Query: 585 ---------------RAVKKI---VKGDSNQPLKAIG-LLKKLCNHPDLLELSEDIPGSE 625
RAV ++ V+ + N L+ I LL+K CNHP L+E D
Sbjct: 528 LEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLLRKCCNHPYLIEYPID----- 582
Query: 626 ELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDL 685
P + +D N S KF +L R L ++K + K++L S T LD+
Sbjct: 583 ---PVTQEFKIDEELVTN--------SGKFLILDRMLPELKKRGH-KVLLFSQMTSMLDI 630
Query: 686 IEKMCFSNHYGVLRLDGTMNINKRQKLVDRFN-DPEGQEFIFLLSSKAGGCGINLIGANR 744
+ C + RLDG+M+ ++R+K + FN DPE FIFL+S++AGG GINL A+
Sbjct: 631 LMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPE--VFIFLVSTRAGGLGINLTAADT 688
Query: 745 LILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 804
+I+ D DWNP +D QA R R GQ K +YR ++ TI++KI +R + K L ++
Sbjct: 689 VIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII- 747
Query: 805 EKEDVERLFSSDNLKQLFKLDTKTICDTHETYNCKR 840
K + S NL + F LD K + + ++ + +R
Sbjct: 748 HKNHFKGGQSGLNLSKNF-LDPKELMELLKSRDYER 782
>YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 778
Score = 198 bits (504), Expect = 3e-50
Identities = 157/572 (27%), Positives = 265/572 (45%), Gaps = 92/572 (16%)
Query: 307 VSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIV 366
+ L +I + EN N I+ADEMGLGKT+Q +AL+ + + +G ++
Sbjct: 227 LEGLNWLITLYENGLNG-----ILADEMGLGKTVQSIALLAFIYEMDTKG-----PFLVT 276
Query: 367 CPSSLVNNWANEIDKWLGP-GSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP-- 423
P S ++NW NE K+ L +G K SA+ +N K
Sbjct: 277 APLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKER--------------SAKLKNFFKQHG 322
Query: 424 ---VLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGT 480
++I SY+ + R+ + + + ++ DEGHRLKN + L I R++L+GT
Sbjct: 323 GTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGT 382
Query: 481 PIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPIL--------QSRDSLATDEEVTLGK 532
P+QN+L+E ++LLNF P + F K F+ L ++ + L DE L K
Sbjct: 383 PLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDE---LQK 439
Query: 533 DRLRQLSNIVSKFIIRRTNNI-LAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIV 591
+ + L I+ F++RR + LA LP K E++I +T Q+ Y+ + + K +
Sbjct: 440 NLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYKAGLNGKLKKTMF 499
Query: 592 KG---------------DSNQPLKAIGLLKKLCNHPDLLE--LSEDIPGSEELIPDDYQS 634
K SN+ ++ K N + ++ + ++L + Q
Sbjct: 500 KELIKDFFTLNDEYIGHVSNRSIRDFINYKLSGNETSNTDNKINPTLLQMDKLYKKNLQM 559
Query: 635 SVDSRTSRN-----RSVIQTAF--------------------SSKFSVLARFLYKIKTES 669
+ ++ +N R +I + F S K +L + + + +E
Sbjct: 560 EISNKKLQNMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEG 619
Query: 670 NDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLS 729
+ K+++ S + LDLIE C N + R+DG++N R+ +++FN + + IFLLS
Sbjct: 620 H-KVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLS 678
Query: 730 SKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIF 789
++A G GINL+GA+ ++L D DWNP D QA+ R R GQ+ +YR TIE I
Sbjct: 679 TRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVIL 738
Query: 790 QRQSMKMSLSSCVVDEKEDVERLFSSDNLKQL 821
R + K +L V+ ++ +NLK+L
Sbjct: 739 TRAANKRNLERMVI-------QMGKFNNLKKL 763
>At5g44800 [R] KOG0383 Predicted helicase
Length = 2228
Score = 196 bits (497), Expect = 2e-49
Identities = 142/489 (29%), Positives = 247/489 (50%), Gaps = 55/489 (11%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT+ A + ++ + R C+++ P S + NW +E W ++
Sbjct: 697 ILADEMGLGKTVSASAFLSSLYFEFGVAR----PCLVLVPLSTMPNWLSEFSLWAPLLNV 752
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP------VLIISYDTLRRNVEQLKNC 442
++ S+ + D H ++ G KP VL+ +Y+ + + L+
Sbjct: 753 ----VEYHGSAKGRAIIRDYEWHAKNSTGTT-KKPTSYKFNVLLTTYEMVLADSSHLRGV 807
Query: 443 EVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLG 502
+++ DEGHRLKN++S F+ L++ RV+L+GTP+QN++ E + LLNF P
Sbjct: 808 PWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFP 867
Query: 503 SRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKY 562
S + F + F L + E+V +L +V+ ++RR + +P K
Sbjct: 868 SLSSFEERFH--------DLTSAEKV-------EELKKLVAPHMLRRLKKDAMQNIPPKT 912
Query: 563 EHVIFINLTPFQQSLYQHFIES--RAVKKIVKGDSNQPLKAIGL-LKKLCNHPDLLELSE 619
E ++ + LT Q Y+ + + ++ I KG + Q + I + L+K+CNHP L+ +E
Sbjct: 913 ERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE 972
Query: 620 DIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNY 679
GS E + D ++ S+K ++L L K+ + ++++ S
Sbjct: 973 PESGSLEFLHD----------------MRIKASAKLTLLHSML-KVLHKEGHRVLIFSQM 1015
Query: 680 TQTLDLIEKMCFSNHYGVL---RLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCG 736
T+ LD++E + +G R+DG++ + RQ + RFN + + F+FLLS++A G G
Sbjct: 1016 TKLLDILEDY-LNIEFGPKTFERVDGSVAVADRQAAIARFNQDKNR-FVFLLSTRACGLG 1073
Query: 737 INLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKM 796
INL A+ +I+ D D+NP AD QA+ R R GQ K +YR + ++EE+I Q K+
Sbjct: 1074 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL 1133
Query: 797 SLSSCVVDE 805
L V++
Sbjct: 1134 MLDQLFVNK 1142
>At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1339
Score = 194 bits (493), Expect = 5e-49
Identities = 174/646 (26%), Positives = 295/646 (44%), Gaps = 82/646 (12%)
Query: 171 QNAVDTKKSQKGKDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNKTLKELLGSSEDNTS 230
Q+A + Q K++E QK + K+L++ +N+ + E TS
Sbjct: 677 QDAKSDRVKQLLKETEKYLQKL-------GSKLKEAKLLTSRFENE-------ADETRTS 722
Query: 231 KKFPNVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQSMEKADT 290
+ ++ + + + + L+ V ++ +L++ + S+++
Sbjct: 723 NATDDETLIENEDESDQAKASYISAFFHLFLMVMIHTIQHYLESNEKYYLMAHSIKENIN 782
Query: 291 QADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQ--------- 341
+ S++ G K E ++ L+ ++ + N N I+ADEMGLGKT+Q
Sbjct: 783 EQPSSLVGGKLR-EYQMNGLRWLVSLYNNHLNG-----ILADEMGLGKTVQMGLGKTVQV 836
Query: 342 ---CLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKS 398
LM T +GP ++V PSS++ W +EI+ W S+ + G
Sbjct: 837 ISLICYLMETKNDRGP--------FLVVVPSSVLPGWQSEINFW--APSIHKIVYCGTPD 886
Query: 399 SLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEV--GLMLADEGHRLK 456
+ + H Q N VL+ +Y+ L ++ K ++ ++ DEGHR+K
Sbjct: 887 E-RRKLFKEQIVH----QKFN----VLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIK 937
Query: 457 NADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPIL 516
NA L R++L+GTP+QN+L E +ALLNF P + S DF + F P
Sbjct: 938 NASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQ 997
Query: 517 QSRDS--LATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQ 574
+ +S L ++EE L +RL Q ++ F++RR + + LP K E +I + +Q
Sbjct: 998 SNGESSALLSEEENLLIINRLHQ---VLRPFVLRRLKHKVENELPEKIERLIRCEASAYQ 1054
Query: 575 QSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQS 634
+ L + ++ + I S ++ L+ +CNHP L +L + E +P +
Sbjct: 1055 KLLMKRVEDN--LGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSE----EHFLPPIVR- 1107
Query: 635 SVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNH 694
K +L R L K+K ++ +++ S T+ LD++E
Sbjct: 1108 ----------------LCGKLEMLDRMLPKLKA-TDHRVLFFSTMTRLLDVMEDYLTLKG 1150
Query: 695 YGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNP 754
Y LRLDG + R L+D FN FIFLLS +AGG G+NL A+ +IL D DWNP
Sbjct: 1151 YKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNP 1210
Query: 755 AADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSS 800
D QA AR R GQKKD + RF + ++EE++ K+ +++
Sbjct: 1211 QVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVAN 1256
>Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1033
Score = 194 bits (492), Expect = 7e-49
Identities = 138/461 (29%), Positives = 220/461 (46%), Gaps = 66/461 (14%)
Query: 364 IIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP 423
+++ P S ++NW NE +W+ SL + G K + +A R+ + P
Sbjct: 215 MVLVPKSTLHNWMNEFKRWVP--SLRVICFVGDKDA-------------RAAFIRDEMMP 259
Query: 424 ----VLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSG 479
V + SY+ + + K ++ DE HR+KN S + + R++L+G
Sbjct: 260 GEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTG 319
Query: 480 TPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRL-RQL 538
TP+QN+L E +ALLNF P + S +DF F D + LG +L +L
Sbjct: 320 TPLQNNLHELWALLNFLLPDVFNSADDFDSWF-------------DTKNCLGDQKLVERL 366
Query: 539 SNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFI--ESRAVKKIVKGDSN 596
++ F++RR + K LP K E I++ L+ Q+ Y + + + K D
Sbjct: 367 HAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKM 426
Query: 597 QPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFS 656
+ L + L+K CNHP L + +E PG + S+ S K
Sbjct: 427 RLLNILMQLRKCCNHPYLFDGAE--PGPPYTTDEHIVSN----------------SGKMV 468
Query: 657 VLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQ------ 710
VL + L K+K E ++++ S T+ LD++E C Y RLDG +R+
Sbjct: 469 VLDKLLAKLK-EQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEV 527
Query: 711 ------KLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARV 764
+ ++ FN P +FIF+LS++AGG GINL A+ +IL D DWNP D QA+ R
Sbjct: 528 EFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRA 587
Query: 765 WRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDE 805
R GQKK ++R I+ T+EE+I +R +K+ L S V+ +
Sbjct: 588 HRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQ 628
>ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 823
Score = 192 bits (488), Expect = 2e-48
Identities = 142/501 (28%), Positives = 239/501 (47%), Gaps = 61/501 (12%)
Query: 307 VSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIV 366
+ L +I ++ENS N CI+ADEMGLGKTLQ +A + + + +R + I+
Sbjct: 58 IEGLNWLINMHENSIN-----CILADEMGLGKTLQTIAFLGYIRYVKKERKRHL----II 108
Query: 367 CPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLI 426
P S + NW E K++ P + +K S S W + +
Sbjct: 109 LPKSTLANWRREFRKFM-PNYKVRVFYSSRKEMRREAEEIMS-SRWDAC----------L 156
Query: 427 ISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDL 486
+Y+ L + ++ DE HR+KN SL + C R++++GTP+QN++
Sbjct: 157 TTYEMCINARSILNTVKWSYIVIDEAHRIKNEHSLLSKIVRIFSCDHRLLITGTPLQNNV 216
Query: 487 SEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFI 546
E +ALLNF P + ND K FE ++ + + +R++ +++ F
Sbjct: 217 HELWALLNFIVPEIF---NDAEK-FESYVMNIDEG---------DGEAIRRIRSVLQLFF 263
Query: 547 IRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQP----LKAI 602
+RR + LP K ++ L+P Q+ Y+ ++ R + + G + P + +
Sbjct: 264 LRREKIDVEMSLPPKKIVNLYSKLSPMQREWYRMLLK-RDLSPL--GSTRDPKGMLMNVV 320
Query: 603 GLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFL 662
L+K CNHP L +E P + + + +I+ S K VL + L
Sbjct: 321 MQLRKCCNHPYLFPDAEPKPYTND-----------------KHIIEN--SGKMIVLDKLL 361
Query: 663 YKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQ 722
+K + + ++++ S + LD++E Y R+DG+ + R + +D FN +
Sbjct: 362 ASLKAKGS-RVLIFSQMSMMLDILEDYAMFREYEYCRIDGSTSYRDRTEAIDGFNAEGSE 420
Query: 723 EFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTG 782
+F+FLL+++AGG GINL A+ +IL D DWNP D QA R R GQKK ++R IS
Sbjct: 421 KFLFLLTTRAGGLGINLSTADTVILFDSDWNPQMDLQAQDRAHRIGQKKQVVVFRLISEN 480
Query: 783 TIEEKIFQRQSMKMSLSSCVV 803
T+EE+I R K+ L ++
Sbjct: 481 TVEERIVYRSLQKLKLDDILL 501
>SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1284
Score = 183 bits (465), Expect = 9e-46
Identities = 158/535 (29%), Positives = 256/535 (47%), Gaps = 72/535 (13%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT Q +A +L+QG G ++V PSS + NW E+ ++
Sbjct: 572 ILADEMGLGKTCQVVAFFALLLEQGHHGPH-----LVVVPSSTLENWLRELARFC----- 621
Query: 389 SSLAIDGKKSSLNN-GNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQ---LKNCEV 444
SL ++ S N+ +++ I +L+ +Y N E LK+
Sbjct: 622 PSLRVEPYYGSQQERANIREAIEE------NEIKYDILVTTYQLATNNKEDRSFLKHQNF 675
Query: 445 GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSR 504
+ + DEGH LKN S + L ++ R++L+GTP+QN+L E +LL F P + S
Sbjct: 676 DVCVYDEGHYLKNRMSERYKHLMNLNANFRLLLTGTPLQNNLKELVSLLAFILPNMFDSD 735
Query: 505 NDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEH 564
D + ++ + A E+ L K R+ + +++ F++RR N + LP K +
Sbjct: 736 MD---DLDVIFKAKPTADADIEQALLSKQRISRAKTMMTPFVLRRRKNQVLNDLPKKTQI 792
Query: 565 VIFINLTPFQQSLYQHFIESRAVKKI---------VKGDSNQPLKAIGL------LKKLC 609
+ L+ Q +Y + + +++ K D K++ L+K
Sbjct: 793 IEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAA 852
Query: 610 NHP----------DLLELSEDIP-------GSEELIPDDYQSSVD---SRTSRNRSVIQT 649
NH L ++++DI +E+ I +D + D R R+ +Q+
Sbjct: 853 NHALLFRKFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFELHRLCRSFPTLQS 912
Query: 650 AF--------SSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLD 701
S K VL L K+K E + +I+L S +TQ LD++E++ + +RLD
Sbjct: 913 YTLKDDPWMDSGKIRVLKELLPKMKEEGS-RILLFSQFTQMLDILEQVLDTLKISYVRLD 971
Query: 702 GTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQAL 761
G+ + RQ ++D+F+ E +FLLS+KAGG GINL AN +IL D +NP D QA
Sbjct: 972 GSTQVEVRQDIIDQFHKEEDVT-VFLLSTKAGGFGINLACANVVILYDCSYNPFDDLQAE 1030
Query: 762 ARVWRDGQKKDCFIYRFISTGTIEEKIFQ----RQSMKMSLSSCVVDEKEDVERL 812
R R GQ ++ + R I+ TIEE I + + ++ MSLSS D +E ERL
Sbjct: 1031 DRAHRVGQVREVTVIRLITDNTIEEYIQKLANTKLALDMSLSSDGKDREEIGERL 1085
>CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1785
Score = 183 bits (464), Expect = 1e-45
Identities = 140/512 (27%), Positives = 240/512 (46%), Gaps = 43/512 (8%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRS--IDKCIIVCPSSLVNNWANEIDKWLG 384
G I+ADEMGLGKT+Q + + ++ + ++ +D +IVC S++ W E+++W
Sbjct: 214 GGILADEMGLGKTIQSVVFLRSIQETARTHYKTTGLDTALIVCHVSIIAQWIKELNQWFP 273
Query: 385 PGSLSSLAIDGKKSSLNNGNVADSV-SHWASAQGRNIVKP---VLIISYDTLRRNVEQLK 440
+ L S + G D V S + Q R P +++ +Y + + +
Sbjct: 274 KARVFLL-----HSHCSTGRQEDYVGSIFRKLQRRRKEYPDGAIILTTYSLFTKLKKPIV 328
Query: 441 NCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGL 500
+++ DEGH ++N ++ A+ + +R IL+GTP QN LSE++ L++F +PG
Sbjct: 329 KHLWQVVILDEGHYIRNENTKCSIAMRKLMTTQRFILTGTPFQNRLSEFWKLVDFVHPGR 388
Query: 501 LGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRR--TNNILAKYL 558
L F +NF I + + E + L L V I+RR ++ L
Sbjct: 389 LSDSATFHRNFTHIINAGANLNCSPEAAAKAYECLVALHIAVKPLILRRLQEDHKEVLQL 448
Query: 559 PCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKA---IGLLKKLCNHPDLL 615
P K E V+ L+ Q+ LY + S V +I++ + LKA I L +CNHP +
Sbjct: 449 PEKQEIVLSCELSKRQRRLYMEYGNSHQVNEIIE----RRLKAFVGINHLTNICNHPGIY 504
Query: 616 ELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVL 675
I D S K + + ++++L
Sbjct: 505 RSLSPASPKFGSIKD---------------------SGKVEMTFKLFDDWFKSPTNRVIL 543
Query: 676 ISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGC 735
+ + ++E + L G + R K++ +F D + +FL++++AGG
Sbjct: 544 FTQRRTVITMMEYFLAEKGIKCVSLTGADSAAARPKIIKKFEDDVSIK-VFLMTTRAGGL 602
Query: 736 GINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMK 795
G+NL AN++I+ DPDWNP AD QA R++R GQ D IYR +S GTIE+ F +Q K
Sbjct: 603 GLNLTCANKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRLVSNGTIEDLKFFKQVQK 662
Query: 796 MSLSSCVVDEKEDVERLFSSDNLKQLFKLDTK 827
+L++ ++ E +++ ++ L LF+L K
Sbjct: 663 ENLAARLLHNAE-IDQFVPNNTLADLFRLKPK 693
Score = 57.8 bits (138), Expect = 7e-08
Identities = 75/364 (20%), Positives = 145/364 (39%), Gaps = 46/364 (12%)
Query: 466 LDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATD 525
+ ++ P R I + T +++ L E + ++F PG L F+ NF+ I AT
Sbjct: 1201 MKKLKTPNRFIFTDTSVRDRLEELWWNVDFVFPGRLSDYKTFQTNFQNVIEIGCRLDATP 1260
Query: 526 EEVTLGKDRLRQL----SNIVSKFIIRRTNNILAKYLPCK--YEHV---IFINLTPFQQS 576
EE + + + L ++ +I+ N+ + K EH+ IF+ Q
Sbjct: 1261 EEASTAYECIVALHVALKPLILSRLIKNPNDWFCRREISKKEVEHIKVRIFVKQYFEQTL 1320
Query: 577 LYQHFI------ESRAVKKIVKGDSNQPL------KAIGLLK--KLCNHPDLLELSEDIP 622
+Q I + R +K + D Q + +GL K +C+HP +
Sbjct: 1321 FFQDIICPLSKRQRRCLKIYKRSDEVQGILRQSSAACVGLKKLTDICDHPGI-------- 1372
Query: 623 GSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQT 682
V T + S+ S K ++ + L K+V+ + Q
Sbjct: 1373 ----------HKGVTPETKKFGSIED---SGKVRIVFQLLDMWLGTPGAKVVIFTQRRQV 1419
Query: 683 LDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGA 742
++E N R+ +V+ F + + I L S G+ L A
Sbjct: 1420 AVMLEHFMKQKRIAYCSFLKAKNAYDRENVVNYFENTTDVQ-ILLAPSIMFKLGMQLKKA 1478
Query: 743 NRLILLDPDWNPAADQQALARV-WRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSC 801
N++I+ DP+WNP +D + + + + +D + R +S GT+E+ + ++ + L+S
Sbjct: 1479 NKVIIFDPEWNPDSDVKHTREMSFLTKKVEDVTVVRLVSEGTVEDSSYFKKLWESGLASR 1538
Query: 802 VVDE 805
++ +
Sbjct: 1539 LLSD 1542
>CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1038
Score = 181 bits (460), Expect = 3e-45
Identities = 140/527 (26%), Positives = 242/527 (45%), Gaps = 52/527 (9%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ DEMGLGKT+Q +A + + + G G +IV PSS + NW E KW S+
Sbjct: 416 ILGDEMGLGKTIQIVAFLSYLKQIGKTGPH-----LIVVPSSTIENWIGEFHKWCP--SI 468
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQ---LKNCEVG 445
L G + + + H Q +I V++ +Y+ + + KN +
Sbjct: 469 QLLTYYGSQDERKH------LRHRVKKQKDHI--DVILTTYNMVTSKSDDKKFFKNFSLN 520
Query: 446 LMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRN 505
++ DEGH LKN DS + L ++ ++++L+GTP+QN+L E +L+ F +
Sbjct: 521 YVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIELISLMYFVLSKVFNKYC 580
Query: 506 DFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHV 565
+ + Q +L T + +DR+ + I+ +I+RR N + LP K E +
Sbjct: 581 EDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYILRRLKNQVLGSLPSKSEQI 640
Query: 566 IFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHP----------DLL 615
I + + Q+ LY + +E+ + +S ++ L++ NHP L
Sbjct: 641 IEVEMKKPQKQLYDNIVEALQQSE----ESGDSYGSLMRLRQAANHPLLRRSEYTDQKLD 696
Query: 616 ELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIK--------- 666
++++ + E+ D V + + +F ++FL +
Sbjct: 697 KIAKMLCLREKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSGKCE 756
Query: 667 ---------TESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFN 717
+ DK+++ S +T LD++E Y RLDG + RQ++++ FN
Sbjct: 757 QLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFN 816
Query: 718 DPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYR 777
+ F+FLLS++AGG GINL AN +I+ D D+NP D+QA R R GQ+K + R
Sbjct: 817 LSK-DLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTR 875
Query: 778 FISTGTIEEKIFQRQSMKMSLSSCVVD-EKEDVERLFSSDNLKQLFK 823
+S GT+E + K+ L V D K ++ + +N K L +
Sbjct: 876 LVSKGTVEVGMLALAKKKLQLEKQVTDGVKGQLDEVHFIENFKFLLE 922
>SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 944
Score = 180 bits (457), Expect = 8e-45
Identities = 148/516 (28%), Positives = 250/516 (47%), Gaps = 44/516 (8%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT Q ++ + ++ ++G Q R ++V PSS + NW E +K+ SL
Sbjct: 436 ILADEMGLGKTCQVISFLASLKEKGIQNRH-----LVVVPSSTLGNWLREFEKFCP--SL 488
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTL---RRNVEQLKNCEVG 445
+ G +S N + + VL+ +Y R + L+
Sbjct: 489 RVESYSGTQSERINKRYYLMDTDF----------DVLVTTYQLASGSRDDRSFLRKQRFD 538
Query: 446 LMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRN 505
+ + DEGH LKN S + L +I R++++GTP+QN+L E +LL F P + +
Sbjct: 539 ISIFDEGHYLKNRMSERYKHLMNIPANFRLLITGTPLQNNLKELISLLAFMLPKVFDNN- 597
Query: 506 DFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHV 565
+ ++ S E L ++R+ + I++ FI+RR + LP K +HV
Sbjct: 598 --MQGLDIIYKIKTTSDGDIERAYLSQERISRAKTIMNPFILRRRKENVLSDLPPKIQHV 655
Query: 566 IFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLE--------- 616
+ ++ Q SLY +E + + + + L+ L + L LE
Sbjct: 656 EYCHMEETQLSLYLSVLELKNLVNANRENILMQLRKAALHQLLFRSQYNLETLSLMSKRI 715
Query: 617 LSED--IPGSEELIPDDYQSSVDSR----TSRNRSVIQTAFSSKFSVLARFLYKI----- 665
L ED + + + I +D + D + R + A K + + + K+
Sbjct: 716 LREDAYLDANPQYIFEDMEVMSDFELHKLADQYRHLHPFALKGKPWMDSAKVKKLCSLLK 775
Query: 666 KTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFI 725
K+ N++I++ S +TQ LD++E + + LRLDG+ + RQ+L+D F+ E + +
Sbjct: 776 KSRPNERILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQLIDDFHTNENYK-V 834
Query: 726 FLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIE 785
FLLS+K+GG GINL AN +IL D +NP D QA R R GQ + +YR I+ TIE
Sbjct: 835 FLLSTKSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRPVHVYRLITKNTIE 894
Query: 786 EKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQL 821
E I + + K++L S + + E +++ S + +K L
Sbjct: 895 ENIRRLANTKLTLESSLTTDSEKIQKEISGELMKSL 930
>At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 861
Score = 178 bits (452), Expect = 3e-44
Identities = 144/507 (28%), Positives = 250/507 (48%), Gaps = 77/507 (15%)
Query: 332 DEMGLGKTLQCLA-LMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSS 390
D+MGLGKTLQ ++ L + +QG G +++CP S+ + W +EI+++ +
Sbjct: 77 DQMGLGKTLQAISFLSYLKFRQGLPG-----PFLVLCPLSVTDGWVSEINRFTPNLEVLR 131
Query: 391 LA------IDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEV 444
+D +KS ++G+ + VL+ +YD + + L
Sbjct: 132 YVGDKYCRLDMRKSMYDHGHF--------------LPFDVLLTTYDIALVDQDFLSQIPW 177
Query: 445 GLMLADEGHRLKNADSLTFTAL-DSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGS 503
+ DE RLKN +S+ + L + PRR++++GTPIQN+L+E +AL++F P + G+
Sbjct: 178 QYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGT 237
Query: 504 RNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAK----YLP 559
+ F F+ ++ D L +V+ K+ + L I+ F++RRT ++L + LP
Sbjct: 238 LDQFLSAFK----ETGDGL----DVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLP 289
Query: 560 CKYEHVIFINLTPFQQSLYQHFI--ESRAVKKIVKGDSNQP-LKAIGL-LKKLCNHPDLL 615
E + + L Q+ +Y + E + ++ G SN L+ I + L+K C+HP L
Sbjct: 290 PLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLF 349
Query: 616 ELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVL 675
PG E P+ ++ ++Q S K VL + L ++ +S +++L
Sbjct: 350 ------PGIE---PEPFEEG--------EHLVQA--SGKLLVLDQLLKRLH-DSGHRVLL 389
Query: 676 ISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFN-------DPE---GQEFI 725
S T TLD+++ Y RLDG++ +R + F+ D E F+
Sbjct: 390 FSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFV 449
Query: 726 FLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIE 785
F++S++AGG G+NL+ A+ +I + DWNP D+QAL R R GQ ++ ++E
Sbjct: 450 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVE 509
Query: 786 EKIFQRQSMKMSLSSCVV----DEKED 808
E I +R K+ LS VV +EKE+
Sbjct: 510 EVILRRAERKLQLSHNVVGDNMEEKEE 536
>Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 897
Score = 175 bits (444), Expect = 2e-43
Identities = 139/490 (28%), Positives = 231/490 (46%), Gaps = 72/490 (14%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSID-KCIIVCPSSLVNNWANEIDKWLGP 385
GCI+ DEMGLGKT Q +AL + GR + + +I+CP S+++NW E+ ++ P
Sbjct: 66 GCILGDEMGLGKTCQTIALFIYLA-----GRLNDEGPFLILCPLSVLSNWKEEMQRF-AP 119
Query: 386 GSLSSLAIDGKKSS---LNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNC 442
G LS + G K L +S H VL+ +Y+ ++ LK+
Sbjct: 120 G-LSCVTYAGDKEERACLQQDLKQESRFH------------VLLTTYEICLKDASFLKSF 166
Query: 443 EVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLG 502
+++ DE HRLKN SL L ++L+GTPIQN L E ++LL+F P L
Sbjct: 167 PWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFS 226
Query: 503 SRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKY 562
+ D + +++ + +L ++ F++RR +A LP K
Sbjct: 227 KE------------EVGDFIQRYQDIEKESESGNELHKLLQPFLLRRVKAEVATELPKKT 274
Query: 563 EHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGL------LKKLCNHPDLLE 616
E VI+ ++ Q+ Y+ + K + N+ K + L L+K +HP L +
Sbjct: 275 EVVIYHGMSALQKKYYKAIL-----MKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFD 329
Query: 617 LSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLI 676
E P+ ++ D T + + L FLY +++L
Sbjct: 330 GVE---------PEPFEVG-DHLTEASGKL------HLLDKLLAFLYS----GGHRVLLF 369
Query: 677 SNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQE--FIFLLSSKAGG 734
S TQ LD+++ Y R+DG++ +R + F GQ+ F+FLLS++AGG
Sbjct: 370 SQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF----GQQPIFVFLLSTRAGG 425
Query: 735 CGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSM 794
G+NL A+ +I +D D+NP D QA AR R GQ K + R I T+EE ++++ +
Sbjct: 426 VGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAAS 485
Query: 795 KMSLSSCVVD 804
K+ L++ +++
Sbjct: 486 KLQLTNMIIE 495
>7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 844
Score = 173 bits (439), Expect = 9e-43
Identities = 148/516 (28%), Positives = 234/516 (44%), Gaps = 54/516 (10%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT+Q +A + + + G S +IV PSS ++NW EI +W +
Sbjct: 311 ILADEMGLGKTIQVIAFLAYLKENG----LSQAAHLIVVPSSTLDNWEAEISRWCPELVV 366
Query: 389 SSLAIDGKKSSLNNGNVA-DSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKN---CEV 444
+ G A D + + VL+ +Y + E+ K C++
Sbjct: 367 EKYHGSQDERRRMRGRFAKDGFTGF----------DVLLTTYHIVGSTPEERKMFRVCKL 416
Query: 445 GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLG-S 503
++ DE H LKN + + L +I R++L+GTP+QN+L E +LL F P S
Sbjct: 417 DYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMPKFFAKS 476
Query: 504 RNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYE 563
D + F D DE + ++++ I+ F++RR + K LP K
Sbjct: 477 IEDIKSLFAKKGKSDGDQ---DEVSQFQETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLS 533
Query: 564 HVIFINLTPFQQSLYQHFIE----------------SRAVKKIVKGDSNQPL-------- 599
V + ++ Q+ Y ++ A+ ++ +N PL
Sbjct: 534 LVEKVPMSSQQKIYYHELVDYYSNNKGEVCSSSERAGIAIMMEMRRIANHPLLMRHYFTD 593
Query: 600 -KAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQ--SSVDSRTSRNRSVIQTAF--SSK 654
G K+L N + +E E + D+Q ++ + + S K
Sbjct: 594 ANLRGFSKRLANASSFKKTNEQYIFEELAVMSDFQVYQMMNKHEFYDVKIPDNLICDSGK 653
Query: 655 FSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVD 714
F L L K+K E + +++L S +T LD++E+ +G RLDG +N RQ L+
Sbjct: 654 FLYLDTLLPKLKAEGH-RVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLIT 712
Query: 715 RFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCF 774
FN + F+FLLS+KAGG GINL A+ ++ D D+NP D+QA R R GQ++
Sbjct: 713 DFNGDDSI-FVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVT 771
Query: 775 IYRFISTGTIEEKIFQRQSMKMSLSSCVV-DEKEDV 809
IYR IS TIEE I K+ L + +EK +V
Sbjct: 772 IYRLISESTIEEGILMAAEEKLKLEKDITSNEKGEV 807
>ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1256
Score = 172 bits (436), Expect = 2e-42
Identities = 132/504 (26%), Positives = 230/504 (45%), Gaps = 83/504 (16%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+AD+MGLGKTLQ L + + + + + K +++CPSSL +W +E+ K+
Sbjct: 819 ILADDMGLGKTLQVLTFLCSEIYKTNR------KVLVICPSSLTGHWKSEVKKFF----- 867
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLML 448
+ + D+ S +LI SY+T R + + ++
Sbjct: 868 -----PFVAAEIYKREDRDTYS-------------ILISSYETFRNDYLNFIEKDWFYVV 909
Query: 449 ADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFR 508
DEGH L+N ++ ++ ++ IRC R+++L+GTP+ N + + +L NF P +G ++
Sbjct: 910 VDEGHVLRNKQTILYSRMNMIRCSRKMVLTGTPVHNSVEDLISLFNFLMPNYIGPEKEYG 969
Query: 509 KNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFI 568
S + +D E+ RL L V FI+RR + K LP K I +
Sbjct: 970 ---------SLNVKMSDSEIEKTHKRLDLLHRKVLPFILRRLKIDVLKDLPPKIIRDITV 1020
Query: 569 NLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELI 628
L P Q+ LY+ E + + GD+ +
Sbjct: 1021 ELGPVQEKLYREIDEKGGKESL--GDAELEYGKVD------------------------- 1053
Query: 629 PDDYQSSVDSRTSRNRSVI---------QTAFSSKFSVLARFLYKIKTES-NDKIVLISN 678
Q +V + +R+ + T S K L + E KI++
Sbjct: 1054 ----QKNVGFKRTRDLFLAVSHIGHFKDSTEVSCKVKALEDIISLCGGEDLGSKILIFFQ 1109
Query: 679 YTQTLDLIEKMCFSNH-YGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGI 737
+ T+DL+ K + + RLDG++ R K+ + FN G + L+++ GG G+
Sbjct: 1110 FKSTIDLVIKDIMKKYKFKYSRLDGSVPSAARTKIAEEFNT--GTTQMLFLTTQVGGLGL 1167
Query: 738 NLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMS 797
NL GA+ +++ + DWNP D QA+ R R GQK+ ++RFI+ T+EEK+ QS KM
Sbjct: 1168 NLTGADTVVMYEHDWNPFNDLQAMDRAHRIGQKRTVNVFRFIARNTLEEKVMNLQSFKMF 1227
Query: 798 LSSCVVDEKE-DVERLFSSDNLKQ 820
+++ +V ++ D+E + + D L++
Sbjct: 1228 VANSLVSQQNADIETMDTKDLLER 1251
>At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 763
Score = 171 bits (433), Expect = 5e-42
Identities = 184/709 (25%), Positives = 312/709 (43%), Gaps = 117/709 (16%)
Query: 164 EDLESFRQNAVDTKKSQKGKDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNKTLKELLG 223
ED E + V + ++ G+ +D++A + + A S G + G
Sbjct: 90 EDEEEVEETKVVMRAARVGRRFVIEDEEASDDDDDEAESSASEDEFGGGGGGSGGRR--G 147
Query: 224 SSEDNTSKKFPNVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMK-DFLDAKTVLDSSS 282
ED K K AKI + E LY +G+ + ++ TV +
Sbjct: 148 EDEDVVGKALQ--------KCAKISADLRKE----LYGTSSGVTDRYSEVETSTVRIVTQ 195
Query: 283 QSMEKADTQADSNITGSKSPVE-TDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQ 341
++ A DS+ P + V+ L + K +G G I+ADEMGLGKT+Q
Sbjct: 196 NDIDDACKAEDSDFQPILKPYQLVGVNFLLLLYK-------KGIEGAILADEMGLGKTIQ 248
Query: 342 CLALMWTMLKQ-----GPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGK 396
+ + T+L + GP ++VCP+S++ NW E+ KW S + L G
Sbjct: 249 AITYL-TLLSRLNNDPGPH--------LVVCPASVLENWERELRKWCP--SFTVLQYHGA 297
Query: 397 KSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQ-------LKNCEVGLMLA 449
+ + + S G+ VL++ Y R+ EQ LK +L
Sbjct: 298 ARAAYSRELNS-----LSKAGKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLM 352
Query: 450 DEGHRLKNADSLTFTALDSI--RCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRN-D 506
DE H LK+ +S + L S+ +R++L+GTP+QNDL E ++LL F P + + N D
Sbjct: 353 DEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVD 412
Query: 507 FRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVI 566
+K +L + D+ + + ++ +I+ FI+RR + + + L K + V
Sbjct: 413 LKK-----LLNAEDT-----------ELITRMKSILGPFILRRLKSDVMQQLVPKIQRVE 456
Query: 567 FINLTPFQQSLYQHFIE---SRAVKKIVKGDS---NQPLKAI---------GLLKKLCNH 611
++ + Q+ Y+ IE + + ++VK S N KA+ +K+ NH
Sbjct: 457 YVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQISNYFTQFRKIANH 516
Query: 612 PDLLE---LSEDI---------------PGSEELIPDDYQSSVDSR------------TS 641
P L+ ED+ S + + ++ + D R T
Sbjct: 517 PLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKGFNDFRIHQLLFQYGVNDTK 576
Query: 642 RNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLD 701
S S+K LA L +K +S ++++ S +T LD++E RLD
Sbjct: 577 GTLSDKHVMLSAKCRTLAELLPSMK-KSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLD 635
Query: 702 GTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQAL 761
G+ + RQ +VD FN+ + F LLS++AGG G+NL GA+ +I+ D D+NP D+QA
Sbjct: 636 GSTQVTDRQTIVDTFNN-DKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAE 694
Query: 762 ARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVE 810
R R GQ K I+R ++ T++E I++ K+ L + V++ V+
Sbjct: 695 DRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLESGVHVD 743
>At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1245
Score = 171 bits (432), Expect = 6e-42
Identities = 139/504 (27%), Positives = 241/504 (47%), Gaps = 70/504 (13%)
Query: 329 IMADEMGLGKTLQCLALMWTMLK-QGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGS 387
I+ADEMGLGKT+Q +AL+ +++ +G G +I+ P++++ NW +E+ WL S
Sbjct: 56 ILADEMGLGKTVQVMALIAYLMEFKGNYGPH-----LIIVPNAVLVNWKSELHTWLP--S 108
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLM 447
+S + G K + +Q + VL+ +Y+ + + +L + +
Sbjct: 109 VSCIYYVGTKDQRSK----------LFSQVKFEKFNVLVTTYEFIMYDRSKLSKVDWKYI 158
Query: 448 LADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDF 507
+ DE R+K+ +S+ LD RC RR++L+GTP+QNDL E ++LLN P + +R F
Sbjct: 159 IIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAF 218
Query: 508 RKNFELPILQ-------SRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPC 560
F P + D L T+++V + + +L I+ F++RR + LP
Sbjct: 219 HDWFAQPFQKEGPAHNIEDDWLETEKKVIV----IHRLHQILEPFMLRRRVEDVEGSLPA 274
Query: 561 KYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGD-----SNQPLKAIGL----------L 605
K V+ ++ Q ++Y +I++ ++ D P+ + L
Sbjct: 275 KVSVVLRCRMSAIQSAVYD-WIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMEL 333
Query: 606 KKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKI 665
+K CNHP L + P + D S K +L R L K+
Sbjct: 334 RKACNHPLL-----NYPYFNDFSKDFLVRS----------------CGKLWILDRILIKL 372
Query: 666 KTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFI 725
+ + +++L S T+ LD++E+ R+DGT ++ R+ + FNDP+ FI
Sbjct: 373 Q-RTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFI 431
Query: 726 FLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIE 785
FLLS +A G G+NL A+ +++ DPD NP ++QA+AR R GQ ++ + I +
Sbjct: 432 FLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTRE---VKVIYMEAVV 488
Query: 786 EKIFQRQSMKMSLSSCVVDEKEDV 809
EK+ Q S VD ++D+
Sbjct: 489 EKLSSHQKEDELRSGGSVDLEDDM 512
>SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 922
Score = 169 bits (428), Expect = 2e-41
Identities = 149/528 (28%), Positives = 244/528 (45%), Gaps = 66/528 (12%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT Q +A ++ + G +++ P+S + NW E K+
Sbjct: 409 ILADEMGLGKTCQTIAFFSLLMDKNINGPH-----LVIAPASTMENWLREFAKFCPK--- 460
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYD---TLRRNVEQLKNCEVG 445
K L G+ + V++ +Y T + + L+N +
Sbjct: 461 -------LKIELYYGSQVEREEIRERINSNKDSYNVMLTTYRLAATSKADRLFLRNQKFN 513
Query: 446 LMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRN 505
+ + DEGH LKN S + L SI RV+L+GTP+QN+L E +LL F P +
Sbjct: 514 VCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQNNLKELISLLAFILPHVF---- 569
Query: 506 DFR-KNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEH 564
D+ K+ ++ + + E L + R+ + +++ F++RR + + LP K
Sbjct: 570 DYGLKSLDVIFTMKKSPESDFERALLSEQRVSRAKMMMAPFVLRRKKSQVLDALPKKTRI 629
Query: 565 VIFINLTPFQQSLYQHFIESRAVKKIVKG-------DSNQPLK--------AIGLLKKLC 609
+ F + ++ Y F ++V ++ D+N L + L+KL
Sbjct: 630 IEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTNANLAKKKSTAGFVLVQLRKLA 689
Query: 610 NHPDLLEL--SEDI---------------PGSEELIPDD--YQSSVDSRTSRNRSVIQTA 650
+HP L + +DI +E I +D Y S ++ + +
Sbjct: 690 DHPMLFRIHYKDDILRQMAKAIMNEPQYKKANELYIFEDMQYMSDIELHNLCCKFPSINS 749
Query: 651 FSSKF-----SVLARFLYKIKT---ESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDG 702
F K + R L K+ T E+ D++VL S +TQ LD+++ + S + LR DG
Sbjct: 750 FQLKDEPWMDATKVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDG 809
Query: 703 TMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALA 762
+ ++ RQ L+D+F E +FLLS+KAGG GINL AN +IL D +NP D QA
Sbjct: 810 STQVDFRQDLIDQFYADESIN-VFLLSTKAGGFGINLACANMVILYDVSFNPFDDLQAED 868
Query: 763 RVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVE 810
R R GQKK+ +Y+F+ TIEE I + + K++L + + E VE
Sbjct: 869 RAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAKIALDATLSGNAETVE 916
>CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1529
Score = 164 bits (414), Expect = 7e-40
Identities = 136/531 (25%), Positives = 235/531 (43%), Gaps = 75/531 (14%)
Query: 321 RNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKC-IIVCPSSLVNNWANEI 379
R G +G I+AD+MGLGKTLQ + + + + +C +IVCP +LV++W E
Sbjct: 997 RTYGLHG-ILADDMGLGKTLQTMCSIALSVDRDEMSE--FHRCSLIVCPRTLVDHWCLEW 1053
Query: 380 DKWLG---PGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNV 436
+++ P S + G + + +I+YD L+
Sbjct: 1054 NRFFPQRVPASKNLTRCHGAE--------------------------ICVIAYDELK--T 1085
Query: 437 EQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFS 496
+ + ++ DEGH ++N+ + + R+ILSGTP+QN ++ ++L +
Sbjct: 1086 AYMMDRVWNYIVLDEGHVMRNSKLRAWKFASQLVGKSRLILSGTPVQNSPADLWSLFAWL 1145
Query: 497 NPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAK 556
PG LGS FR F I++ R A + ++ G + QL +V F++RR + K
Sbjct: 1146 MPGYLGSEKQFRSQFLKKIMKCRLPKANEADLKAGSAAISQLHKLVLPFVMRRLKTEVLK 1205
Query: 557 YLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLE 616
LP K LT Q+ +Y+ ++ + G S+ L + L+KL +H L+
Sbjct: 1206 ELPEKNVQDYECELTEDQKEIYRFVVDRCTSSQEDVGLSS--LVTLITLRKLTDHTKLVH 1263
Query: 617 LSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIK---------- 666
+ G+ + I S A S K L + L + +
Sbjct: 1264 DTLAKIGAPQYI---------------LSKALAAKSGKMEALKQLLIECEICKNPDEEVE 1308
Query: 667 --------TESNDKIVLISNYTQTLDLIEKMCFSNHYGV----LRLDGTMNINKRQKLVD 714
S + ++ + + L+ S +G L LDG++ R K+V+
Sbjct: 1309 QPEDLGGLVASGHRALIFCQWKTSAKLVSDALKSGEFGSVVSHLVLDGSVPAGDRMKMVN 1368
Query: 715 RFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCF 774
RFN+ + + + +L++ GG G+NL GA+ +I LD DWNP D QA+ R R GQ ++
Sbjct: 1369 RFNEDKTID-VLILTTHVGGVGLNLTGADTVIFLDHDWNPMKDLQAIDRAHRLGQTRNVN 1427
Query: 775 IYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLD 825
+YR I+ GT+EEK+ K++ + ++ + L +F LD
Sbjct: 1428 VYRLITQGTVEEKVMSLAKFKLNTAQALIGADNTSMMTMETGELMNMFTLD 1478
>7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1311
Score = 161 bits (407), Expect = 5e-39
Identities = 134/515 (26%), Positives = 234/515 (45%), Gaps = 49/515 (9%)
Query: 156 DGDIPEQHEDLESFRQNAVDTKKSQKGKDSESQDQ-----KAKESSPNSAPSIHHPKMLS 210
D + P E+ E R+++ D +++ DSE Q K ES S+ K
Sbjct: 294 DYEAPAAEEEEEEERKSSGDEEEAANSSDSEVMPQRKRRRKKSESDKGSSDFEPEEKQKK 353
Query: 211 NG---VKNKTLKELLGSSEDNTSK-KFPNVPVVIDPKLAKIL----------RPHQVEGV 256
G +K + E G +D+ K K ++ +I K + R ++E
Sbjct: 354 KGRKRIKKTSSGESDGDGDDDKQKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDR 413
Query: 257 RFLYRCVTGLVMKDFLDAKTVLDSSSQSMEKADTQADSNITGSKSPVET-DVSSLKDV-I 314
+ LY + V + ++ ++ + +KA Q D + P + V + D
Sbjct: 414 QKLYNRI--FVKSESVEINELVLDFDEESKKALLQVDKGLLKKLKPHQVAGVKFMWDACF 471
Query: 315 KINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNN 374
+ + S+ + GCI+A MGLGKTLQ + L T+L R +D+ +I+ P S VNN
Sbjct: 472 ETLKESQEKPGSGCILAHCMGLGKTLQVVTLSHTLLVN--TRRTGVDRVLIISPLSTVNN 529
Query: 375 WANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLR- 433
WA E W+ + + + + + ++ W + G V I+ YD R
Sbjct: 530 WAREFTSWMKFANRNDIEVYDISRYKDKPTRIFKLNEWFNEGG------VCILGYDMYRI 583
Query: 434 -----------RNVEQLKNCEVG----LMLADEGHRLKNADSLTFTALDSIRCPRRVILS 478
+ EQL V L++ DEGH LKN + A+ +R RR++L+
Sbjct: 584 LANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLT 643
Query: 479 GTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQL 538
GTP+QN+L EY+ ++ F P LLG+ ++ F PI + + +T+ ++ L K R L
Sbjct: 644 GTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHIL 703
Query: 539 SNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKK--IVKGDSN 596
++ I RR ++LA YLP K+E+V++ L+ QQ LY +++ + + V G
Sbjct: 704 HKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTHREQSGGDVVGKGA 763
Query: 597 QPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDD 631
+ + L+++ HP L ++ D ++ L+ +D
Sbjct: 764 RLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSND 798
Score = 122 bits (307), Expect = 2e-27
Identities = 81/288 (28%), Positives = 147/288 (50%), Gaps = 40/288 (13%)
Query: 615 LELSEDIPGSEELIPDD----YQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESN 670
LE+ + G + DD ++ V+ R N S K +L R L + +
Sbjct: 861 LEMLGGLGGGSSVQKDDPSEWWKPFVEERELNN-----VHHSPKLLILLRLLQQCEA-IG 914
Query: 671 DKIVLISNYTQTLDLIE----------------------KMCFSNHYGVLRLDGTMNINK 708
DK+++ S Q+LD+IE K C+++ RLDG+ ++ +
Sbjct: 915 DKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQ 974
Query: 709 RQKLVDRFNDPEG-QEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRD 767
R+ + +FN+ + +FL+S++AGG GINL+ ANR+++ D WNP+ D Q++ RV+R
Sbjct: 975 REAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRF 1034
Query: 768 GQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTK 827
GQ K C+IYR I+ GT+E+K+++RQ K + + V+DE++ + R ++ +L +L+ + K
Sbjct: 1035 GQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDEQQ-ISRHYNQTDLMELYSYELK 1093
Query: 828 TICDTHETYNCKRCKNGKQILKAPVMLYGDATSWNHLNHDALAKTNDH 875
+ K L A ++ + + + HD+L + +H
Sbjct: 1094 PSTEREMPI------LPKDRLFAEILTEHEKLIFKYHEHDSLLEQEEH 1135
>At1g05480 [L] KOG0390 DNA repair protein SNF2 family
Length = 588
Score = 157 bits (396), Expect = 9e-38
Identities = 154/600 (25%), Positives = 253/600 (41%), Gaps = 119/600 (19%)
Query: 250 PHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQSMEKADTQADSNITGSKSPVETDVSS 309
PHQ EG F+++ + G +M ++
Sbjct: 3 PHQQEGFEFIWKNLAGTIM--------------------------------------LNE 24
Query: 310 LKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPS 369
LKD ENS G GCIM+ G GKT + + L+ P K +I+ P+
Sbjct: 25 LKDF----ENSDETG--GCIMSHAPGTGKTRLTIIFLQAYLQCFPDC-----KPVIIAPA 73
Query: 370 SLVNNWANEIDKW---LGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIV----- 421
SL+ WA E KW + +LSSL GK++S G + A+A+ N +
Sbjct: 74 SLLLTWAEEFKKWNISIPFHNLSSLDFTGKENSAALGLLMQKN---ATARSNNEIRMVKI 130
Query: 422 ------KPVLIISYDTLRR------------------------NVEQLKNCEVGLMLADE 451
K +L ISY+ + ++ ++ GL++ DE
Sbjct: 131 YSWIKSKSILGISYNLYEKLAGVKDEDKKTKMVREVKPDKELDDIREILMGRPGLLVLDE 190
Query: 452 GHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNF 511
H +N S + L + +R++LSGTP QN+ E +L + P L K
Sbjct: 191 AHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLERLTSTLKKS 250
Query: 512 ELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLT 571
+ + + +E G + +L ++ F+ +IL LP E V+ +N
Sbjct: 251 GMTVTKRGKKNLGNEINNRG---IEELKAVMLPFVHVHKGSILQSSLPGLRECVVVLNPP 307
Query: 572 PFQQSLYQHF--IESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIP 629
Q+ + + +R K + + + L ++ HP L+ + I E L
Sbjct: 308 ELQRRVLESIEVTHNRKTKNVFETEHKLSLVSV--------HPSLVSRCK-ISEKERLSI 358
Query: 630 DD--YQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIE 687
D+ R N+SV +T F +F L + +K+++ S Y L LI
Sbjct: 359 DEALLAQLKKVRLDPNQSV-KTRFLMEFVELCEVI-------KEKVLVFSQYIDPLKLIM 410
Query: 688 KMCFSNHYG-----VLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGA 742
K S VL + G + +RQ L++ FNDP+ + +FL S+KA GI+L+GA
Sbjct: 411 KHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGA 470
Query: 743 NRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCV 802
+R+ILLD WNPA ++QA++R +R GQK+ + Y ++ GT E + +Q+ K +S V
Sbjct: 471 SRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELV 530
>SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 830
Score = 153 bits (387), Expect = 1e-36
Identities = 145/579 (25%), Positives = 245/579 (42%), Gaps = 117/579 (20%)
Query: 314 IKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVN 373
+K E A G I+AD+MGLGKT+Q +AL+ + P+ + SI ++V P SL+
Sbjct: 244 LKSRETVSKSSASGGILADDMGLGKTIQMIALI--LSHPLPKKKHSIKSTLVVAPLSLIK 301
Query: 374 NWANEIDKWLGPGSLSSLAIDGKK-----SSLNNGNVADS-----VSHWAS--AQGRNIV 421
W +E+ L+++ G ++ +V + VS W S G +
Sbjct: 302 QWESEVQT---KSKLTAIVYHGASRYKLLKVIHEYDVVITTYQILVSEWVSHNTTGTDGK 358
Query: 422 KPVLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTP 481
P SY+ + ++ + + DE H +KN S + A +++ R L+GTP
Sbjct: 359 SPTEAKSYEKKKPSLFAFYWWRI---ILDEAHTIKNKSSKSALACCALQGINRWCLTGTP 415
Query: 482 IQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNI 541
+QN++ E ++L+ F + ++ ++ LP+ Q ++L RLR L ++
Sbjct: 416 LQNNVDELYSLVKFLHINPFNDQSVWKDQISLPLCQGEENLVFK--------RLRMLLSV 467
Query: 542 VSKFIIRRTNNIL---------------AKYLP----CKYEHV---IFINLTPFQQSLYQ 579
+ ++RRT +L +K L CK+E + NL +
Sbjct: 468 I---MLRRTKTLLEANAGKDGTGGALKLSKRLVYKVICKFEESERDFYSNLARNMERTMS 524
Query: 580 HFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLL--ELSEDIPGSEEL---------- 627
+F+ S + K + L + L++ CNHP L + +D+ L
Sbjct: 525 NFVNSGKLGK----NYTNILCLLLRLRQACNHPQSLNFQFEQDVDAFNALDGAANTNKLA 580
Query: 628 -------------------------------IPDDYQSSVDSRTSRNRSVIQTAF----- 651
+P D+ SRN +
Sbjct: 581 SDQDVDDLANLLETVEIGSRKKSFCTICMAELPPDFHEKKCKDCSRNFKELDKGIQDPND 640
Query: 652 -----SSKFSVLARFLYKIKTESND------KIVLISNYTQTLDLIEKMCFSNHYGVLRL 700
SSK + + L + E +D K ++ S +T LD+I+ G +R
Sbjct: 641 KTLYKSSKIREILKILSLDEQEEDDTVRGLRKTIIFSQFTTFLDIIDLHLRKAGIGFVRY 700
Query: 701 DGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQA 760
DG MN R+K +D G + + L S K G G+NL A+R+IL D WNPA ++QA
Sbjct: 701 DGRMNNRAREKSLDLLRSDSGTQ-VLLCSLKCGALGLNLTCASRVILCDVWWNPAIEEQA 759
Query: 761 LARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLS 799
+ RV R GQ++D +Y+ + TIEEKI + Q++K L+
Sbjct: 760 IDRVHRIGQRRDVLVYKLVVENTIEEKIVELQNLKRDLA 798
>Hs19923174 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1162
Score = 149 bits (377), Expect = 1e-35
Identities = 149/571 (26%), Positives = 238/571 (41%), Gaps = 76/571 (13%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSI----------DKC-------IIVCPS 369
G I+AD+MGLGKTL +AL+ T Q + + D C +I+CP+
Sbjct: 591 GGILADDMGLGKTLTMIALILTQKNQEKKEEKEKSTALTWLSKDDSCDFTSHGTLIICPA 650
Query: 370 SLVNNWANEIDKWLGPGSLSSLAIDG--KKSSLNNGNVADSVSHWASAQGRNIVKPVLII 427
SL+++W NE++K + L G + S + D V S + I
Sbjct: 651 SLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARVLSTYDIVITTYSLVAKEIPTNKQEA 710
Query: 428 SYDTLRRNVE----QLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQ 483
NVE L ++ DE H +KN T A+ ++ R ++GTPIQ
Sbjct: 711 EIPGANLNVEGTSTPLLRIAWARIILDEAHNVKNPRVQTSIAVCKLQACARWAVTGTPIQ 770
Query: 484 NDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVS 543
N+L + ++LL F N +R + + + L+ + L + QL +
Sbjct: 771 NNLLDMYSLLKFLRCSPFDEFNLWRSQVDNGSKKGGERLSILTKSLLLRRTKDQLDSTGR 830
Query: 544 KFIIRRTNNILAKYLPCKY-EHVIFINLTPFQQSLYQHFIESRAVKKIVKGDS-NQPLKA 601
+I +L E ++ +S Q +++ + G S N P
Sbjct: 831 PLVILPQRKFQLHHLKLSEDEETVYNVFFARSRSALQSYLKRHESRGNQSGRSPNNPFSR 890
Query: 602 IGL-----------------------------LKKLCNHPDLLELSED---IPGSEELIP 629
+ L L++ C H LL+ + D + G ++
Sbjct: 891 VALEFGSEEPRHSEAADSPRSSTVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLS 950
Query: 630 DDYQSSV-------DSRTSRNRSVIQTAF----------SSKFSVLARFLYKIKTES-ND 671
+ Q S DS S S+ T F S+K S L L I+ S +
Sbjct: 951 LEEQLSALTLSELRDSEPSSTVSLNGTFFKMELFEGMRESTKISSLLAELEAIQRNSASQ 1010
Query: 672 KIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSK 731
K V++S +T L ++ + +DG++N +R LV+ FN G + + L+S
Sbjct: 1011 KSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVEAFNHSRGPQ-VMLISLL 1069
Query: 732 AGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQR 791
AGG G+NL G N L LLD WNP+ + QA R++R GQ+KD I+RF+ GT+EEKI Q
Sbjct: 1070 AGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1129
Query: 792 QSMKMSLSSCVVDEKEDVERLFSSDNLKQLF 822
Q K L+ V+ + + +L+ LF
Sbjct: 1130 QEKKKDLAKQVLSGSGESVTKLTLAHLRVLF 1160
>7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1534
Score = 147 bits (372), Expect = 5e-35
Identities = 116/466 (24%), Positives = 199/466 (41%), Gaps = 100/466 (21%)
Query: 183 KDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNKTLKELLGSSEDNTSKKFPNVPVVIDP 242
++ E +D + S ++ S H K + N + + G N + + + P
Sbjct: 325 EEEEEEDDEDLNESDDATNSGMHVKDIYN------VPDENGQVVVNMAHPEGEETLYLAP 378
Query: 243 KLAKILRPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQSMEKADTQADSNITGSKSP 302
++AK+++PHQ+ GVRFLY
Sbjct: 379 QIAKVIKPHQIGGVRFLY------------------------------------------ 396
Query: 303 VETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDK 362
++I+ +GCI+A MGLGKTLQ ++ L+ S
Sbjct: 397 --------DNIIESTRRYNKSSGFGCILAHSMGLGKTLQVVSFCDIFLRH-----TSAKT 443
Query: 363 CIIVCPSSLVNNWANEIDKWLG---------PGSLSSLAIDGKKSSLNNGNVADSVSHWA 413
+ V P + + NW +E + W+ P + ++ ++ +L A + +W
Sbjct: 444 VLCVMPINTLQNWLSEFNMWIPRYSTDSNVRPRNFDIFVLNDQQKTLTAR--AKVILNWV 501
Query: 414 SAQG-----------------------RNIVKPV-LIISYDTLRRNVEQLKNCEVGLMLA 449
G ++++P + S D + E L L++
Sbjct: 502 HDGGVLLIGYELFRLLALKLVKTRKRKGSVIRPDGMDSSSDLMNLVYEALVKPGPDLVIC 561
Query: 450 DEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRK 509
DEGHR+KN+ + AL IR RR++L+G P+QN+L EY+ +++F P LG+R +F
Sbjct: 562 DEGHRIKNSHAGISLALKEIRTRRRIVLTGYPLQNNLLEYWCMVDFVRPNYLGTRTEFCN 621
Query: 510 NFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFIN 569
FE PI + +T +++ L + R L +++ F+ RR++ +L LP KYE+VI +
Sbjct: 622 MFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLGFVQRRSHTVLQLTLPQKYEYVILVK 681
Query: 570 LTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLL 615
+T FQ+ LY F+ K PLKA + K+ NHPD+L
Sbjct: 682 MTAFQRKLYDTFMTDVVRTKAFP----NPLKAFAVCCKIWNHPDVL 723
>CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1359
Score = 146 bits (368), Expect = 2e-34
Identities = 121/503 (24%), Positives = 215/503 (42%), Gaps = 92/503 (18%)
Query: 165 DLESFRQNAVDTKKSQKGKDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNKTLKELLGS 224
D ++ +D ++++K + + ++ + + +ML+ + LK ++
Sbjct: 380 DSSKLQKETIDAERAEKERRKRLEKKQKEFNGIVLEEGEDLTEMLTGTSSQRKLKSVVLD 439
Query: 225 SEDNTSKKFPNVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQS 284
+ +T + PV + L +IL+PHQ G++F+Y C + +S
Sbjct: 440 PDSSTVDEESKKPVEVHNSLVRILKPHQAHGIQFMYDC------------------AFES 481
Query: 285 MEKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLA 344
+++ DT+ G I+A MGLGKTLQ +
Sbjct: 482 LDRLDTEGS---------------------------------GGILAHCMGLGKTLQVIT 508
Query: 345 LMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWL--GPGSLSSLAIDGKKSSLNN 402
+ T+L G + + ++V P +++ NW E KWL L ++ ++ S
Sbjct: 509 FLHTVLMHEKIGEKC-KRVLVVVPKNVIINWFKEFQKWLVDNDEELDTIDVNELDSYKTI 567
Query: 403 GNVADSVSHWASAQGRNIVKPVLIISYDTLR-----------------RNVEQ------- 438
+ ++ W S++ V+II YD R R +E+
Sbjct: 568 EDRRRALKAWHSSK----TPSVMIIGYDLFRILTVEDDPKKKKPKNRNRRLEKAKEDFRK 623
Query: 439 -LKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSN 497
L+N +++ DE H+LKN DS + I RR+ L+GTP+QN+L EY ++NF
Sbjct: 624 YLQNPGPDMVVCDEAHKLKNDDSALSKCMVKILTKRRICLTGTPLQNNLMEYHCMVNFVK 683
Query: 498 PGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKY 557
PGLLG++ +F F I + R A+ EV+ K R L + + K + R+ +L +
Sbjct: 684 PGLLGTKTEFANRFVNIINRGRTKDASPLEVSFMKRRCHVLYDHLKKCVDRKDYRVLTEA 743
Query: 558 LPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGD---SNQPLKAIGLLKKLCNHPDL 614
+P K E+VI + T Q +LY F+ + GD S + L + ++ HP
Sbjct: 744 IPPKQEYVINVRQTERQCALYNAFLND------IVGDSGLSKRLLPDYHMFSRIWTHPYQ 797
Query: 615 LELSEDIPGSEELIPDDYQSSVD 637
L L E E ++ +D + D
Sbjct: 798 LVLHEQRMERERVMREDAEEEAD 820
Score = 112 bits (281), Expect = 2e-24
Identities = 81/259 (31%), Positives = 131/259 (50%), Gaps = 34/259 (13%)
Query: 650 AFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMC---------FSNHYGVLR- 699
A S+K +L + K + E DK+++ S ++L LI++M F++ + L
Sbjct: 944 ALSNKLILLVEIIKKCE-EIGDKLLVFSQSLESLTLIKRMLEYMAGTGQWFADGHEALNA 1002
Query: 700 ----------------LDGTMNINKRQKLVDRFNDPEG-QEFIFLLSSKAGGCGINLIGA 742
+DG++ KR + FNDP + + L+S++AG G N++ A
Sbjct: 1003 EGEETWSWLEGEDYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNMVAA 1062
Query: 743 NRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCV 802
NR+I+ D WNP+ D Q+L RV+R GQ K +IYRFI+ GT+EE+I++RQ K S S V
Sbjct: 1063 NRVIIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRV 1122
Query: 803 VDEKEDVERLFSSDNLKQLFKLDTKTICDTHETYNCKRCKNGKQILKAPVMLYGDATSWN 862
VDE + ++R + ++L +L++ T E C K L A V+ +
Sbjct: 1123 VDEAQ-IQRHYLGNDLTELYQFTPSTFDPDVEI----SCAPPKDRLLADVIHKNQHAVVD 1177
Query: 863 HLNHDAL-AKTNDHLLKNE 880
++ HD L A D L +
Sbjct: 1178 YIEHDTLFANVEDEKLTEQ 1196
>At3g24340 [L] KOG0390 DNA repair protein SNF2 family
Length = 1132
Score = 145 bits (367), Expect = 2e-34
Identities = 135/544 (24%), Positives = 242/544 (43%), Gaps = 76/544 (13%)
Query: 309 SLKDVIKINE-NSRN-RGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIV 366
+L KINE NS +G+ GCI++ + G GKT + + + LK+ P +++
Sbjct: 591 NLAGTTKINELNSVGVKGSGGCIISHKAGTGKTRLTVVFLQSYLKRFPNSHP-----MVI 645
Query: 367 CPSSLVNNWANEIDKW---LGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP 423
P++L+ W +E+ KW + +++SL + G + A++VS + N ++
Sbjct: 646 APATLMRTWEDEVRKWNVNIPFYNMNSLQLSGYED-------AEAVSRLEGNRHHNSIRM 698
Query: 424 VLIIS--------------YDTLRRNVEQLKNCE------------VGLMLADEGHRLKN 457
V ++S Y+ L N KN E GL++ DEGH +N
Sbjct: 699 VKLVSWWKQKSILGISYPLYEKLAAN----KNTEGMQVFRRMLVELPGLLVLDEGHTPRN 754
Query: 458 ADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQ 517
SL + L +R +R+ LSGT QN+ E +L + P + + + EL
Sbjct: 755 QSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSNVLCLARPADKDTISS--RIHEL---- 808
Query: 518 SRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSL 577
S+ S + ++R+ L +++ F+ IL + LP + V+ +N PFQQ
Sbjct: 809 SKCSQEGEHGRVNEENRIVDLKAMIAHFVHVHEGTILQESLPGLRDCVVVLN-PPFQQKK 867
Query: 578 YQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVD 637
I++ S + L + HP L + +I ++
Sbjct: 868 ILDRIDT----------SQNTFEFEHKLSAVSVHPSLYLCCNPTKKEDLVIGPATLGTLK 917
Query: 638 SRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMC-----FS 692
+ ++T F F +I +K+++ S Y TL LI + ++
Sbjct: 918 RLRLKYEEGVKTKFLIDF-------IRISGTVKEKVLVYSQYIDTLKLIMEQLIAECDWT 970
Query: 693 NHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDW 752
+L + G + RQ ++D FN P+ + L S+KA GI+L+GA+R+++LD W
Sbjct: 971 EGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVGASRVVILDVVW 1030
Query: 753 NPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERL 812
NP+ + QA++R +R GQK+ FIY + T E + +QS K +S V + ++
Sbjct: 1031 NPSVESQAISRAFRIGQKRAVFIYHLMVKDTSEWNKYCKQSEKHRISELVFSSTNEKDKP 1090
Query: 813 FSSD 816
+++
Sbjct: 1091 INNE 1094
>Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2492
Score = 144 bits (364), Expect = 5e-34
Identities = 120/440 (27%), Positives = 206/440 (46%), Gaps = 39/440 (8%)
Query: 164 EDLESFRQNAVDTKKSQKGKDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNKTLKELLG 223
ED S ++ + ++ +K ++ E ++++ +E + S S G K ++++L
Sbjct: 1432 EDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDS------KSPGKGRKKIRKIL- 1484
Query: 224 SSEDNTSKKFPNVPVVIDPKLAKIL-RPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSS 282
+D + N + + +I R + E +R + K + K VLD
Sbjct: 1485 -KDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDE 1543
Query: 283 QSMEKADTQADSNITGSKSPVETD-VSSLKDVI--KINENSRNRGAYGCIMADEMGLGKT 339
++ E Q N+ P + D V + D + + ++ G+ GCI+A MGLGKT
Sbjct: 1544 ETKEPL-VQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGS-GCILAHCMGLGKT 1601
Query: 340 LQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWL-GPGSLSSLAIDGKKS 398
LQ ++ + T+L + ++VCP + NW NE +KW G L + +
Sbjct: 1602 LQVVSFLHTVLLCD---KLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELAT 1658
Query: 399 SLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLR-----RNVEQLKNCEV--------- 444
+ + W G V+II Y+ R RNV+ K E+
Sbjct: 1659 VKRPQERSYMLQRWQEDGG------VMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPG 1712
Query: 445 -GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGS 503
++ DEGH LKN S A++SIR RR+IL+GTP+QN+L EY ++NF LLGS
Sbjct: 1713 PDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGS 1772
Query: 504 RNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYE 563
+FR F PI + + +T +V + K R L +++ + R+ L K+LP K+E
Sbjct: 1773 IKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHE 1832
Query: 564 HVIFINLTPFQQSLYQHFIE 583
+V+ + +T Q LYQ++++
Sbjct: 1833 YVLAVRMTSIQCKLYQYYLD 1852
Score = 119 bits (298), Expect = 2e-26
Identities = 79/235 (33%), Positives = 124/235 (52%), Gaps = 30/235 (12%)
Query: 629 PDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEK 688
PD Y+ V T + V++ S K +L L ++ E DK+++ S +LDLIE
Sbjct: 1999 PDWYKDFV---TDADAEVLE--HSGKMVLLFEIL-RMAEEIGDKVLVFSQSLISLDLIED 2052
Query: 689 MC----------------------FSNHYGVLRLDGTMNINKRQKLVDRFNDPEG-QEFI 725
+ + RLDG+ R+K + FND + +
Sbjct: 2053 FLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRL 2112
Query: 726 FLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIE 785
F++S+KAG GINL+ ANR+I+ D WNP+ D Q++ RV+R GQ K ++YRF++ GT+E
Sbjct: 2113 FIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTME 2172
Query: 786 EKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTKTICDTHETYNCKR 840
+KI+ RQ K SLS VVD+++ VER F+ + L +L+ + + D + KR
Sbjct: 2173 DKIYDRQVTKQSLSFRVVDQQQ-VERHFTMNELTELYTFEPDLLDDPNSEKKKKR 2226
>Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2288
Score = 144 bits (364), Expect = 5e-34
Identities = 120/440 (27%), Positives = 206/440 (46%), Gaps = 39/440 (8%)
Query: 164 EDLESFRQNAVDTKKSQKGKDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNKTLKELLG 223
ED S ++ + ++ +K ++ E ++++ +E + S S G K ++++L
Sbjct: 1228 EDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDS------KSPGKGRKKIRKIL- 1280
Query: 224 SSEDNTSKKFPNVPVVIDPKLAKIL-RPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSS 282
+D + N + + +I R + E +R + K + K VLD
Sbjct: 1281 -KDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDE 1339
Query: 283 QSMEKADTQADSNITGSKSPVETD-VSSLKDVI--KINENSRNRGAYGCIMADEMGLGKT 339
++ E Q N+ P + D V + D + + ++ G+ GCI+A MGLGKT
Sbjct: 1340 ETKEPL-VQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGS-GCILAHCMGLGKT 1397
Query: 340 LQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWL-GPGSLSSLAIDGKKS 398
LQ ++ + T+L + ++VCP + NW NE +KW G L + +
Sbjct: 1398 LQVVSFLHTVLLCD---KLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELAT 1454
Query: 399 SLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLR-----RNVEQLKNCEV--------- 444
+ + W G V+II Y+ R RNV+ K E+
Sbjct: 1455 VKRPQERSYMLQRWQEDGG------VMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPG 1508
Query: 445 -GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGS 503
++ DEGH LKN S A++SIR RR+IL+GTP+QN+L EY ++NF LLGS
Sbjct: 1509 PDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGS 1568
Query: 504 RNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYE 563
+FR F PI + + +T +V + K R L +++ + R+ L K+LP K+E
Sbjct: 1569 IKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHE 1628
Query: 564 HVIFINLTPFQQSLYQHFIE 583
+V+ + +T Q LYQ++++
Sbjct: 1629 YVLAVRMTSIQCKLYQYYLD 1648
Score = 119 bits (298), Expect = 2e-26
Identities = 79/235 (33%), Positives = 124/235 (52%), Gaps = 30/235 (12%)
Query: 629 PDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEK 688
PD Y+ V T + V++ S K +L L ++ E DK+++ S +LDLIE
Sbjct: 1795 PDWYKDFV---TDADAEVLE--HSGKMVLLFEIL-RMAEEIGDKVLVFSQSLISLDLIED 1848
Query: 689 MC----------------------FSNHYGVLRLDGTMNINKRQKLVDRFNDPEG-QEFI 725
+ + RLDG+ R+K + FND + +
Sbjct: 1849 FLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRL 1908
Query: 726 FLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIE 785
F++S+KAG GINL+ ANR+I+ D WNP+ D Q++ RV+R GQ K ++YRF++ GT+E
Sbjct: 1909 FIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTME 1968
Query: 786 EKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTKTICDTHETYNCKR 840
+KI+ RQ K SLS VVD+++ VER F+ + L +L+ + + D + KR
Sbjct: 1969 DKIYDRQVTKQSLSFRVVDQQQ-VERHFTMNELTELYTFEPDLLDDPNSEKKKKR 2022
>Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2454
Score = 144 bits (364), Expect = 5e-34
Identities = 120/440 (27%), Positives = 206/440 (46%), Gaps = 39/440 (8%)
Query: 164 EDLESFRQNAVDTKKSQKGKDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNKTLKELLG 223
ED S ++ + ++ +K ++ E ++++ +E + S S G K ++++L
Sbjct: 1394 EDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDS------KSPGKGRKKIRKIL- 1446
Query: 224 SSEDNTSKKFPNVPVVIDPKLAKIL-RPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSS 282
+D + N + + +I R + E +R + K + K VLD
Sbjct: 1447 -KDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDE 1505
Query: 283 QSMEKADTQADSNITGSKSPVETD-VSSLKDVI--KINENSRNRGAYGCIMADEMGLGKT 339
++ E Q N+ P + D V + D + + ++ G+ GCI+A MGLGKT
Sbjct: 1506 ETKEPL-VQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGS-GCILAHCMGLGKT 1563
Query: 340 LQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWL-GPGSLSSLAIDGKKS 398
LQ ++ + T+L + ++VCP + NW NE +KW G L + +
Sbjct: 1564 LQVVSFLHTVLLCD---KLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELAT 1620
Query: 399 SLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLR-----RNVEQLKNCEV--------- 444
+ + W G V+II Y+ R RNV+ K E+
Sbjct: 1621 VKRPQERSYMLQRWQEDGG------VMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPG 1674
Query: 445 -GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGS 503
++ DEGH LKN S A++SIR RR+IL+GTP+QN+L EY ++NF LLGS
Sbjct: 1675 PDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGS 1734
Query: 504 RNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYE 563
+FR F PI + + +T +V + K R L +++ + R+ L K+LP K+E
Sbjct: 1735 IKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHE 1794
Query: 564 HVIFINLTPFQQSLYQHFIE 583
+V+ + +T Q LYQ++++
Sbjct: 1795 YVLAVRMTSIQCKLYQYYLD 1814
Score = 119 bits (298), Expect = 2e-26
Identities = 79/235 (33%), Positives = 124/235 (52%), Gaps = 30/235 (12%)
Query: 629 PDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEK 688
PD Y+ V T + V++ S K +L L ++ E DK+++ S +LDLIE
Sbjct: 1961 PDWYKDFV---TDADAEVLE--HSGKMVLLFEIL-RMAEEIGDKVLVFSQSLISLDLIED 2014
Query: 689 MC----------------------FSNHYGVLRLDGTMNINKRQKLVDRFNDPEG-QEFI 725
+ + RLDG+ R+K + FND + +
Sbjct: 2015 FLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRL 2074
Query: 726 FLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIE 785
F++S+KAG GINL+ ANR+I+ D WNP+ D Q++ RV+R GQ K ++YRF++ GT+E
Sbjct: 2075 FIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTME 2134
Query: 786 EKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTKTICDTHETYNCKR 840
+KI+ RQ K SLS VVD+++ VER F+ + L +L+ + + D + KR
Sbjct: 2135 DKIYDRQVTKQSLSFRVVDQQQ-VERHFTMNELTELYTFEPDLLDDPNSEKKKKR 2188
>7298963 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1061
Score = 142 bits (359), Expect = 2e-33
Identities = 147/620 (23%), Positives = 254/620 (40%), Gaps = 144/620 (23%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQ------------------------------G 356
G I+AD+MGLGKTL ++ + K G + G
Sbjct: 460 GGILADDMGLGKTLTMISSVLAC-KNGQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSKG 518
Query: 357 RRSIDK--CIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWAS 414
R+ + ++VCP+SL+ W +E++ + L+ G + D
Sbjct: 519 RKDTRRGGTLVVCPASLLRQWESEVESKVSRQKLTVCVHHGNNRETKGKYLRDY------ 572
Query: 415 AQGRNIVKPVLIISYDTLRRNVEQLK---NCEVGLMLADEGHRLKNADSLTFTALDSIRC 471
+++ +Y + R + L + ++ DE H ++N S + A+ +R
Sbjct: 573 --------DIVVTTYQIVAREHKSLSAVFGVKWRRIILDEAHVVRNHKSQSSLAVCDLRG 624
Query: 472 PRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFE----------------LPI 515
R L+GTPIQN + +ALL F + ++K + L +
Sbjct: 625 KYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTWKKWIDNKSAGGQNRLNLLMKSLML 684
Query: 516 LQSRDSLATDEEVTLGKDRLRQLSNI--------VSKFIIRRTNNILAKYLPCKYEHVIF 567
+++ L +D ++ ++ +L I V + ++ + + A++L + E
Sbjct: 685 RRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTYSRTLFAQFLHQRAERETD 744
Query: 568 INLTP------FQQ---------SLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHP 612
N + Q +++ F KK VK S+ L + L+++C HP
Sbjct: 745 FNYRSDANKPTYNQIKDPNGAYYKMHEKFARMAGSKKEVK--SHDILVLLLRLRQICCHP 802
Query: 613 DLLELSEDIPGSEELIPDDYQSS-----------------VDSRTSRNRSVIQTAF---- 651
L++ D G E D+ S D+ T +SV
Sbjct: 803 GLIDAMLD--GEESQTMGDHSSDSDTPEIDLLAQLNKLAITDTSTDGQQSVANAGDDGPP 860
Query: 652 ----------------------------SSKFSVLARFLY-KIKTESNDKIVLISNYTQT 682
SSK +++ + L I S+DK +++S +T
Sbjct: 861 LLPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVIQILKTSILKSSDDKAIVVSQWTSV 920
Query: 683 LDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGA 742
LD++ + L L+GT+ + RQ +V+ FND Q+ + LLS AGG G+NLIGA
Sbjct: 921 LDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGA 980
Query: 743 NRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCV 802
N L+LLD WNP + QA R++R GQKK+ IY+F+ T+E++I Q K+ L+ V
Sbjct: 981 NHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGV 1040
Query: 803 VDEKEDVERLFSSDNLKQLF 822
+ + V + D+LK LF
Sbjct: 1041 LTGAK-VSSKLTIDDLKGLF 1059
>At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 678
Score = 135 bits (340), Expect = 3e-31
Identities = 134/556 (24%), Positives = 235/556 (42%), Gaps = 93/556 (16%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLK-QGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGP 385
G I+ADEMG+GKT+Q ++L+ + + R ++ +++ P ++ W +EI + P
Sbjct: 155 GGILADEMGMGKTIQAISLVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSP 214
Query: 386 GSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISY---DTLRRNVEQLKNC 442
GS L G K N V + P++ Y + + + L +
Sbjct: 215 GSTRVLQYHGPKRDKN-------VQKLMNYDFVLTTSPIVENEYRKDEGVDETMSPLHSI 267
Query: 443 EVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLG 502
+ ++ DE H +KN S T A+ ++ R LSGTP+QND+ E ++L+++S
Sbjct: 268 KWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSLVSYS------ 321
Query: 503 SRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKY 562
F F +T + N+ KF+I NIL +P +
Sbjct: 322 ----FLNFF----------YSTYASFAFRHTHITFARNVTVKFLIG--GNILPLSIPVRI 365
Query: 563 EHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAI-------------------- 602
E+V + + SL + R +V+ D + L +
Sbjct: 366 ENVPAVLIMQINTSLGG---KRRDALSVVEADFYESLYKVSKTTFDGYIQAGTLMNNYAH 422
Query: 603 --GLLKKL---CNHPDLLELSEDIPGSEELIP----------------DDYQSSVDSRTS 641
GLL +L +HP L+ S + L+ D + +S + + S
Sbjct: 423 IFGLLIRLRQAVDHPYLVSYSSPSGANANLLDANKNEKECGFGHDPSKDYFVTSSEHQAS 482
Query: 642 RNR-------------SVIQTAFSSKFSVLARFL-YKIKTESNDKIVLISNYTQTLDLIE 687
+ + ++ S+K L + + ++ + + K ++ S +T LDLI
Sbjct: 483 KTKLKGFRASSILNRINLDDFKTSTKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLIS 542
Query: 688 KMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLIL 747
+ ++L G+M+ + + F + E + L+S +AGG +NL A+ + +
Sbjct: 543 YALGKSGVSCVQLVGSMSKAAKDAALKNFKE-EPDCRVLLMSLQAGGVALNLTAASHVFM 601
Query: 748 LDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSL-SSCVVDEK 806
+DP WNPA ++QA R+ R GQ K + RFI T+EEKI Q K L S + D +
Sbjct: 602 MDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKKEDLFESTLGDSE 661
Query: 807 EDVERLFSSDNLKQLF 822
E V + D++K LF
Sbjct: 662 EAVVQKLGEDDIKSLF 677
>At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1048
Score = 130 bits (328), Expect = 7e-30
Identities = 89/290 (30%), Positives = 147/290 (50%), Gaps = 23/290 (7%)
Query: 329 IMADEMGLGKTLQCLALMWTML-KQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGS 387
I+ADEMGLGKT+ +AL+ + +G G +IV P+S++ NW E KW
Sbjct: 143 ILADEMGLGKTIMTIALLAHLACDKGIWGPH-----LIVVPTSVMLNWETEFLKWCPAFK 197
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLM 447
+ + K+ L W + V I +Y + ++ + K + +
Sbjct: 198 ILTYFGSAKERKLKRQG-------WMKLNSFH----VCITTYRLVIQDSKMFKRKKWKYL 246
Query: 448 LADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDF 507
+ DE H +KN S + L + RR++L+GTP+QNDL E ++L++F P + S +F
Sbjct: 247 ILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEF 306
Query: 508 RKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIF 567
+ F PI + + + + K+ + +L N++ F++RR + K LP K+EHVIF
Sbjct: 307 KDWFCNPI-----AGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIF 361
Query: 568 INLTPFQQSLYQHFIESRAVK-KIVKGDSNQPLKAIGLLKKLCNHPDLLE 616
L+ Q++LY+ FI S + + G + I L+K+CNHPDL E
Sbjct: 362 CRLSKRQRNLYEDFIASTETQATLTSGSFFGMISIIMQLRKVCNHPDLFE 411
Score = 112 bits (280), Expect = 3e-24
Identities = 69/188 (36%), Positives = 101/188 (53%), Gaps = 3/188 (1%)
Query: 654 KFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLV 713
K LA L K+K + + ++ + T+ LD++E Y +RLDG+ +RQ L+
Sbjct: 661 KLQELAMLLRKLKFGGH-RALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLM 719
Query: 714 DRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDC 773
RFN + F+F+LS+++GG GINL+GA+ +I D DWNPA DQQA R R GQ ++
Sbjct: 720 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 778
Query: 774 FIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTKTICDTH 833
IYR IS TIEE I ++ + K L + V+ E F + +LF K +
Sbjct: 779 HIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELFS-GHKALTTKD 837
Query: 834 ETYNCKRC 841
E K C
Sbjct: 838 EKETSKHC 845
>CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1933
Score = 130 bits (327), Expect = 9e-30
Identities = 91/296 (30%), Positives = 148/296 (49%), Gaps = 35/296 (11%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQ----GPQGRRSIDKCIIVCPSSLVNNWANEIDKWLG 384
I+ADEMGLGKT+Q ++L+ M GP +IV P+S++ NW E KW
Sbjct: 619 ILADEMGLGKTIQTISLLAHMACSESIWGPH--------LIVVPTSVILNWEMEFKKWCP 670
Query: 385 PGSLSSLAIDG---KKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKN 441
+L L G +++ G + + H V I SY T+ +++ K
Sbjct: 671 --ALKILTYFGTAKERAEKRKGWMKPNCFH------------VCITSYKTVTQDIRAFKQ 716
Query: 442 CEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLL 501
++ DE +KN S + AL ++R RR++L+GTP+QN L E ++L++F P +
Sbjct: 717 RAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMELWSLMHFLMPTIF 776
Query: 502 GSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCK 561
S +DF+ F P+ + +G+ L ++ FI+RR + K LP K
Sbjct: 777 SSHDDFKDWFSNPLTGMMEGNMEFNAPLIGR-----LHKVLRPFILRRLKKEVEKQLPEK 831
Query: 562 YEHVIFINLTPFQQSLYQHFIESRAVKKIVK-GDSNQPLKAIGLLKKLCNHPDLLE 616
EH++ +L+ Q+ LY F+ R+ K+ +K G+ L + L+K CNHP+L E
Sbjct: 832 TEHIVNCSLSKRQRYLYDDFMSRRSTKENLKSGNMMSVLNIVMQLRKCCNHPNLFE 887
Score = 111 bits (277), Expect = 6e-24
Identities = 64/169 (37%), Positives = 97/169 (56%), Gaps = 8/169 (4%)
Query: 656 SVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDR 715
+VL R LY K + ++ + ++ LD+++ + Y RLDGT + +RQ +++R
Sbjct: 1245 AVLLRQLYLYK----HRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMER 1300
Query: 716 FN-DPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCF 774
FN DP+ F F+LS+++GG G+NL GA+ +I D DWNP D QA R R GQ ++
Sbjct: 1301 FNADPK--VFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVS 1358
Query: 775 IYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLF-SSDNLKQLF 822
IYR IS TIEE I ++ + K L +DE F SD+++ LF
Sbjct: 1359 IYRLISERTIEENILRKATQKRRLGELAIDEAGFTPEFFKQSDSIRDLF 1407
>Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 348
Score = 126 bits (317), Expect = 1e-28
Identities = 91/261 (34%), Positives = 139/261 (52%), Gaps = 26/261 (9%)
Query: 585 RAVKKI---VKGDSNQPLKAIG-LLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRT 640
RAV ++ V+ + N L+ I LL+K CNHP L+E D P + +D
Sbjct: 53 RAVVEVNIPVESEVNLKLQNIMMLLRKCCNHPYLIEYPID--------PVTQEFKIDEEL 104
Query: 641 SRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRL 700
N S KF +L R L ++K + K++L S T LD++ C + RL
Sbjct: 105 VTN--------SGKFLILDRMLPELKKRGH-KVLLFSQMTSMLDILMDYCHLRDFNFSRL 155
Query: 701 DGTMNINKRQKLVDRFN-DPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQ 759
DG+M+ ++R+K + FN DPE FIFL+S++AGG GINL A+ +I+ D DWNP +D Q
Sbjct: 156 DGSMSYSEREKNMHSFNTDPE--VFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQ 213
Query: 760 ALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLK 819
A R R GQ K +YR ++ TI++KI +R + K L ++ K + S NL
Sbjct: 214 AQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII-HKNHFKGGQSGLNLS 272
Query: 820 QLFKLDTKTICDTHETYNCKR 840
+ F LD K + + ++ + +R
Sbjct: 273 KNF-LDPKELMELLKSRDYER 292
>HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 310
Score = 126 bits (316), Expect = 2e-28
Identities = 84/238 (35%), Positives = 127/238 (53%), Gaps = 22/238 (9%)
Query: 604 LLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLY 663
LL+K CNHP L+E D P + +D N S KF +L R L
Sbjct: 3 LLRKCCNHPYLIEYPID--------PVTQEFKIDEELVTN--------SGKFLILDRMLP 46
Query: 664 KIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFN-DPEGQ 722
++K + K++L S T LD++ C + RLDG+M+ ++R+K + FN DPE
Sbjct: 47 ELKKRGH-KVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPE-- 103
Query: 723 EFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTG 782
FIFL+S++AGG GINL A+ +I+ D DWNP +D QA R R GQ K +YR ++
Sbjct: 104 VFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTAN 163
Query: 783 TIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTKTICDTHETYNCKR 840
TI++KI +R + K L ++ K + S NL + F LD K + + ++ + +R
Sbjct: 164 TIDQKIVERAAAKRKLEKLII-HKNHFKGGQSGLNLSKNF-LDPKELMELLKSRDYER 219
>At4g31900 [R] KOG0383 Predicted helicase
Length = 1067
Score = 125 bits (315), Expect = 2e-28
Identities = 88/285 (30%), Positives = 144/285 (49%), Gaps = 36/285 (12%)
Query: 548 RRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGD---SNQPLKAIGL 604
R ++L +P K E ++ ++++ Q+ +Y+ I + K D SN +K
Sbjct: 326 RLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAKISNVLMK---- 381
Query: 605 LKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYK 664
L+++C+HP LL D++ + +++ S K +L + + K
Sbjct: 382 LRQVCSHPYLLP--------------DFEPRFEDANEAFTKLLEA--SGKLQLLDKMMVK 425
Query: 665 IKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEF 724
+K E ++++ + + TL L+E ++ R+DG ++ +RQ +DRFN F
Sbjct: 426 LK-EQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRF 484
Query: 725 IFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTI 784
FLLS++AGG GINL A+ +I+ D DWNP AD QA+ARV R GQ IYR I GT+
Sbjct: 485 CFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTV 544
Query: 785 EEKIFQRQSMKMSLSSCVV-------DEKEDV-----ERLFSSDN 817
EE++ + KM L VV DE +D+ + LFS +N
Sbjct: 545 EERMMEITKNKMLLEHLVVGKQHLCQDELDDIIKYGSKELFSEEN 589
>At3g42670 [L] KOG0390 DNA repair protein SNF2 family
Length = 1256
Score = 124 bits (312), Expect = 5e-28
Identities = 149/655 (22%), Positives = 272/655 (40%), Gaps = 138/655 (21%)
Query: 211 NGVKNKTLKELLGSSEDNTSKKFPNVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKD 270
+GV++ T + SS+ ++++ NV +I P+L + L HQ + FL++
Sbjct: 638 DGVESHTFTIPVASSDMPSAEESDNVWSLI-PQLKRKLHLHQKKAFEFLWK--------- 687
Query: 271 FLDAKTVLDSSSQSMEKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIM 330
N+ GS P D SS K GC++
Sbjct: 688 ------------------------NLAGSVVPAMMDPSSDK-------------IGGCVV 710
Query: 331 ADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSS 390
+ G GKT +A + + LK P G+R + ++ P + + W E KW P +
Sbjct: 711 SHTPGAGKTFLIIAFLASYLKIFP-GKRPL----VLAPKTTLYTWYKEFIKWEIPVPVHL 765
Query: 391 L------AIDGKKSSLNNG------------NVADSVSHWASAQGRNIVKPVLIISYDTL 432
L + +K+ G + D + W + VL++ Y +
Sbjct: 766 LHGRRTYCMSKEKTIQFEGIPKPSQDVMHVLDCLDKIQKWHAQPS------VLVMGYTSF 819
Query: 433 ------------RRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGT 480
R+ + ++ GL++ DEGH ++ S AL + R++LSGT
Sbjct: 820 LTLMREDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGT 879
Query: 481 PIQNDLSEYFALLNFSNPGLLGS-RNDFRKNFELP--------ILQSR------DSLATD 525
QN+ EYF L + P + + K F+ +L++R D +A
Sbjct: 880 LFQNNFCEYFNTLCLARPKFVHEVLVELDKKFQTNQAEQKAPHLLENRARKFFLDIIAKK 939
Query: 526 EEVTLGKDRLRQLS---NIVSKFI--IRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQH 580
+ +G +RL+ L+ N+ S FI + + LP + + +N T Q
Sbjct: 940 IDTKVGDERLQGLNMLRNMTSGFIDNYEGSGSGSGDVLPGLQIYTLLMNSTDVQHK---- 995
Query: 581 FIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIP---GSEELIPDDYQSSVD 637
++ I+ PL+ L+ HP L++ + +EL+ +
Sbjct: 996 --SLTKLQNIMSTYHGYPLELELLITLAAIHPWLVKTTTCCAKFFNPQELLEIEKLKHDA 1053
Query: 638 SRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYG- 696
+ S+ V+ F + +KI++ + + L ++ F N +
Sbjct: 1054 KKGSKVMFVLNLVF--------------RVVKREKILIFCHNIAPIRLFLEL-FENVFRW 1098
Query: 697 -----VLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPD 751
+L L G + + +R +++D+F +P GQ + L S A GI+L A+R+I+LD +
Sbjct: 1099 KRGRELLTLTGDLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSE 1158
Query: 752 WNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEK 806
WNP+ +QA+AR +R GQ+K ++Y+ +S GT+EE ++R + K +SS + E+
Sbjct: 1159 WNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFSEE 1213
>CE11083 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1091
Score = 122 bits (307), Expect = 2e-27
Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 668 ESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFL 727
E +K+V++S +T L+LIE S+ + + G + + RQ+ VD FN +G + L
Sbjct: 931 EKKEKVVIVSQWTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQERVDSFNREKGGARVML 990
Query: 728 LSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 787
LS AGG G+NL G N L+++D WNPA +QQA R++R GQKKD FI+R ++ GTIE++
Sbjct: 991 LSLAAGGVGLNLTGGNHLVMVDLHWNPALEQQAFDRIYRMGQKKDVFIHRLVTKGTIEQR 1050
Query: 788 IFQRQSMKMSLSSCVVD--EKEDVERLFSSDNLKQLFKLDTK 827
+ Q K++L+S V+D + +L ++D +K LF L+ K
Sbjct: 1051 VVMLQKDKVALASSVLDGNATRKMNKLTTAD-IKMLFGLNEK 1091
>At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1496
Score = 122 bits (306), Expect = 2e-27
Identities = 134/572 (23%), Positives = 249/572 (43%), Gaps = 97/572 (16%)
Query: 101 IYSTLRRSFTVPIKGYVP--RHNIPMALGTKAKVVIPPRPLHDPTDELA--IVLYDPTVD 156
I++T R ++ K + + + M +G K+ PR T +++ ++L+ D
Sbjct: 365 IFTTFHRKLSIDAKRFADGCQREVRMKVGRSYKI---PRTAPIRTRKISRDMLLFWKRYD 421
Query: 157 GDIPEQHEDLESFRQNAVDTKKSQKGKDSESQDQKAKESSPNSAPSIHHPKMLSNGVKNK 216
+ E+ + E ++ A K+ Q+ ++S+ Q Q+ I ++ S+ ++NK
Sbjct: 422 KQMAEERKKQE--KEAAEAFKREQEQRESKRQQQRLNFL-------IKQTELYSHFMQNK 472
Query: 217 T---LKELLGSSEDNTSKKFPNVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLV--MKDF 271
T E L ++N + +P + +++ P + E + R V K
Sbjct: 473 TDSNPSEALPIGDENPIDEV--LPETSAAEPSEVEDPEEAELKEKVLRAAQDAVSKQKQI 530
Query: 272 LDA-KTVLDSSSQSMEKADTQADSNITGSKS---------PVETDVSS---LKDVIKINE 318
DA T Q+ E D +++GS + PV + V + K +K +
Sbjct: 531 TDAFDTEYMKLRQTSEMEGPLNDISVSGSSNIDLHNPSTMPVTSTVQTPELFKGTLKEYQ 590
Query: 319 --------NSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSS 370
N +G G I+ADEMGLGKT+Q +A + + ++ + ++V P+S
Sbjct: 591 MKGLQWLVNCYEQGLNG-ILADEMGLGKTIQAMAFLAHLAEE----KNIWGPFLVVAPAS 645
Query: 371 LVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP------- 423
++NNWA+EI ++ ++ +W Q R I++
Sbjct: 646 VLNNWADEISRFCPD--------------------LKTLPYWGGLQERTILRKNINPKRM 685
Query: 424 --------VLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRV 475
+LI SY L + + + + M+ DE +K++ S+ + L S C R+
Sbjct: 686 YRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRL 745
Query: 476 ILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRL 535
+L+GTPIQN+++E +ALL+F P L + + F + F I + TL + +L
Sbjct: 746 LLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENH-----AEHGGTLNEHQL 800
Query: 536 RQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDS 595
+L I+ F++RR + L K E + L+ QQ+ YQ ++ ++ +
Sbjct: 801 NRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNR 860
Query: 596 NQ--PLKAIGL------LKKLCNHPDLLELSE 619
Q K + L L+K+CNHP+L E +E
Sbjct: 861 GQFTDKKVLNLMNIVIQLRKVCNHPELFERNE 892
Score = 88.6 bits (218), Expect = 4e-17
Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 652 SSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQK 711
S K L L +++ N +++L + T+ L+++E Y LRLDG+ I R+
Sbjct: 1205 SGKLQTLDILLKRLRA-GNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRD 1263
Query: 712 LVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKK 771
+V F F+FLLS++AGG GINL A+ +I + DWNP D QA+ R R GQ K
Sbjct: 1264 MVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK 1322
Query: 772 DCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV 803
D T+EEKI R S K ++ V+
Sbjct: 1323 D---------ETVEEKILHRASQKNTVQQLVM 1345
>At2g21450 [L] KOG0390 DNA repair protein SNF2 family
Length = 816
Score = 122 bits (306), Expect = 2e-27
Identities = 122/516 (23%), Positives = 229/516 (43%), Gaps = 76/516 (14%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKW---- 382
GCI+A G GKT ++ + + + PQ R ++V P ++ +W E W
Sbjct: 287 GCILAHAPGSGKTFLLISFLQSFMAMDPQARP-----LVVLPKGIIESWKREFTLWEVEK 341
Query: 383 LGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRR-----NVE 437
+ S+ + +K L + W + +L + Y R N E
Sbjct: 342 IPLLDFYSVKAESRKQQLK------VLGQWIKE------RSILFLGYQQFTRIICDDNFE 389
Query: 438 QL-KNCEV------GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYF 490
++C++ L++ DEGH +N ++ ++L ++ R+V+L+GT QN++ E F
Sbjct: 390 AASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTRRKVVLTGTLFQNNVEEVF 449
Query: 491 ALLNFSNPGLL---GSR---NDFRKNFELP----ILQSRDSLA----TDEEVTLGKDRLR 536
+L+ P L G+R + E+P + QS S+ E+TL +
Sbjct: 450 NILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGTFFAAVELTLQRSTNF 509
Query: 537 QLSNIVSKFIIRRTNNIL-------AKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKK 589
+ K + T NIL + LP E + +NL+ Q+ E + ++K
Sbjct: 510 SAKASLIKDLREMTRNILHYHKADFSGLLPGLSEFTVMLNLSSIQRD------EVKGLRK 563
Query: 590 IVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSV-IQ 648
+ + K I L L HP L E+ P + E D ++V + + ++
Sbjct: 564 M------ELFKQISLGAALYIHPKLKSFLEENPSNGEKGFSDNNTTVMKLDKMLKKINVR 617
Query: 649 TAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNH-----YGVLRLDGT 703
KF + L + + +K+++ S Y + +E++ S + + G
Sbjct: 618 DGVKMKFFL---NLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGD 674
Query: 704 MNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALAR 763
+ +R+ ++RFN+ + +F S KA G GI+L+GA+R+++LD NP+ QQA+AR
Sbjct: 675 SSNEQREWSMERFNN-SLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVAR 733
Query: 764 VWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLS 799
+R GQK+ + Y+ ++ + EE+ ++ + K +S
Sbjct: 734 AYRPGQKRKVYAYKLVAADSPEEENYETCTRKEMMS 769
>At5g20420 [L] KOG0390 DNA repair protein SNF2 family
Length = 1261
Score = 122 bits (305), Expect = 3e-27
Identities = 148/651 (22%), Positives = 268/651 (40%), Gaps = 121/651 (18%)
Query: 207 KMLSNGVKNKTLKELLGSSEDNTSKKFPNVPVVIDPKLAKILRPHQVEGVRFLYRCVTGL 266
K+ + K + SSE +++ NV +I PKL + L HQ FL+R
Sbjct: 639 KLSHKEAQTKDFSMISDSSEMLAAEESDNVWALI-PKLKRKLHVHQRRAFEFLWR----- 692
Query: 267 VMKDFLDAKTVLDSSSQSMEKADTQADSNITGSKSPVETDVSSLKDVIKINENSRNRGAY 326
N+ GS P SL D S N G
Sbjct: 693 ----------------------------NVAGSVEP------SLMD-----PTSGNIG-- 711
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGP- 385
GC+++ G GKT +A + + LK P G+R + ++ P + + W E KW P
Sbjct: 712 GCVISHSPGAGKTFLIIAFLTSYLKLFP-GKRPL----VLAPKTTLYTWYKEFIKWEIPV 766
Query: 386 ------GSLSSLAIDGKKSSLNNG------NVADSVSHWASAQGRNIVKPVLIISYDTL- 432
G + K+ NG +V + Q + VL++ Y +
Sbjct: 767 PVHLIHGRRTYCTFKQNKTVQFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSFT 826
Query: 433 -----------RRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTP 481
R+ + ++ GL++ DEGH ++ S AL + R++LSGT
Sbjct: 827 TLMREDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTL 886
Query: 482 IQNDLSEYFALLNFSNPG-----LLGSRNDFRKNFELP----ILQSR------DSLATDE 526
QN+ EYF L + P L+ F+ N + +L++R D +A
Sbjct: 887 FQNNFCEYFNTLCLARPKFIHEVLMELDQKFKTNHGVNKAPHLLENRARKLFLDIIAKKI 946
Query: 527 EVTLGKDRLR---QLSNIVSKFI--IRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHF 581
+ ++G +RL+ L N+ + FI + + LP + + +N T Q +
Sbjct: 947 DASVGDERLQGLNMLKNMTNGFIDNYEGSGSGSGDALPGLQIYTLVMNSTDIQHKILTK- 1005
Query: 582 IESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTS 641
++ ++K PL+ + HP L+ S ++ P + +
Sbjct: 1006 -----LQDVIKTYFGYPLEVELQITLAAIHPWLVTSSNCC--TKFFNPQELSEIGKLKHD 1058
Query: 642 RNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYG----- 696
+ SK + ++++ +KI++ + + + ++ F N +
Sbjct: 1059 AKKG-------SKVMFVLNLIFRVV--KREKILIFCHNIAPIRMFTEL-FENIFRWQRGR 1108
Query: 697 -VLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPA 755
+L L G + + +R +++D+F +P + L S A GI+L A+R+I+LD +WNP+
Sbjct: 1109 EILTLTGDLELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPS 1168
Query: 756 ADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEK 806
+QA+AR +R GQ+K ++Y+ +S GT+EE ++R + K +S + E+
Sbjct: 1169 KTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSCMIFSEE 1219
>At2g16390 [L] KOG0390 DNA repair protein SNF2 family
Length = 888
Score = 119 bits (299), Expect = 2e-26
Identities = 122/501 (24%), Positives = 206/501 (40%), Gaps = 81/501 (16%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPG 386
GCIMA G GKT ++ M + L + PQ K ++V P ++ W E +W
Sbjct: 372 GCIMAHAPGSGKTFMIISFMQSFLAKYPQA-----KPLVVLPKGILPTWKKEFVRWQVE- 425
Query: 387 SLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNV-----EQLKN 441
+ L K+ N + W K +L + Y V + L
Sbjct: 426 DIPLLDFYSAKAE-NRAQQLSILKQWMEK------KSILFLGYQQFSTIVCDDTTDSLSC 478
Query: 442 CEV-----GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFS 496
E+ +++ DEGH +N D+ +L ++ PR+V+LSGT QN + E F +LN
Sbjct: 479 QEILLKVPSILILDEGHTPRNEDTNLLQSLAQVQTPRKVVLSGTLYQNHVKEVFNILNLV 538
Query: 497 NPGLL-------------------------GSRNDFRKNFELPILQSRDSLATDEEVTLG 531
P L GS +D F + +L E+ T+
Sbjct: 539 RPKFLKLDTSKSAVKRILAYTPCDVRGRLTGSNSDMASMFNETV---EHTLQKSEDFTVK 595
Query: 532 KDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIV 591
++ L + K + + L + LP + + +NL+P Q + VKK+
Sbjct: 596 IKVIQDLREMTKKVLHYYKGDFLDE-LPGLADFTVVLNLSPKQLN---------EVKKLR 645
Query: 592 KGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAF 651
+ + A+G L HP L S+ + D+ +D +
Sbjct: 646 REKRKFKVSAVGSAIYL--HPKLKVFSDKSDDVSDTTMDEMVEKLD---------LNEGV 694
Query: 652 SSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMC-----FSNHYGVLRLDGTMNI 706
+KF + L + + +K+++ S Y L +E++ + V L G +
Sbjct: 695 KAKFFLN---LINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSS 751
Query: 707 NKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWR 766
+R+ ++ FN + IF S KA G GI+L+GA+R+++LD NP+ +QA+ R +R
Sbjct: 752 EQREWSMETFNSSPDAK-IFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFR 810
Query: 767 DGQKKDCFIYRFISTGTIEEK 787
GQKK YR I+ + EE+
Sbjct: 811 PGQKKMVHAYRLIAGSSPEEE 831
>YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1489
Score = 116 bits (290), Expect = 2e-25
Identities = 98/369 (26%), Positives = 161/369 (43%), Gaps = 71/369 (19%)
Query: 319 NSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQ----GPQGRRSIDKCIIVCPSSLVNN 374
N ++G G I+ADEMGLGKT+Q ++++ + + GP ++V P+S ++N
Sbjct: 719 NLYDQGING-ILADEMGLGKTVQSISVLAHLAENHNIWGP--------FLVVTPASTLHN 769
Query: 375 WANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP----------- 423
W NEI K+L + + +W +A R +++
Sbjct: 770 WVNEISKFLPQFKI--------------------LPYWGNANDRKVLRKFWDRKNLRYNK 809
Query: 424 -----VLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILS 478
V++ SY + + L+ + M+ DE +K++ S + L S C R++L+
Sbjct: 810 NAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLT 869
Query: 479 GTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQL 538
GTPIQN + E +ALL+F P L S ++F + F I ++ L + +LR+L
Sbjct: 870 GTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEA-----NTKLNQQQLRRL 924
Query: 539 SNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQ----------HFIESRAVK 588
I+ F++RR + L K E + +LT Q LYQ IE+ A
Sbjct: 925 HMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATN 984
Query: 589 KIV------KGDSNQPLKAIGLLKKLCNHPDLLELSE-DIPGSEELIPDDYQSSVDSRTS 641
G + A+ +K+CNHPDL E ++ D P S S +
Sbjct: 985 DSTSNSASNSGSDQNLINAVMQFRKVCNHPDLFERADVDSPFSFTTFGKTTSMLTASVAN 1044
Query: 642 RNRSVIQTA 650
N SVI +
Sbjct: 1045 NNSSVISNS 1053
Score = 105 bits (262), Expect = 3e-22
Identities = 68/215 (31%), Positives = 115/215 (52%), Gaps = 8/215 (3%)
Query: 619 EDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISN 678
ED P + L P+ + S S S+K L L K+K+E + ++++
Sbjct: 1266 EDFPKTG-LFPEPLNKNFSSNISMPSMDRFITESAKLRKLDELLVKLKSEGH-RVLIYFQ 1323
Query: 679 YTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLV-DRFNDPEGQEFIFLLSSKAGGCGI 737
T+ +DL+E+ Y +RLDG+ + R+ LV D +PE F+FLLS++AGG GI
Sbjct: 1324 MTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPE--IFVFLLSTRAGGLGI 1381
Query: 738 NLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMS 797
NL A+ +I D DWNP D QA+ R R GQ + +YR + GTIEE++ R K
Sbjct: 1382 NLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQ 1441
Query: 798 LSSCVVD---EKEDVERLFSSDNLKQLFKLDTKTI 829
+ V++ ++++++ + +N ++ + +K+I
Sbjct: 1442 VQQVVMEGKTQEKNIKTIEVGENDSEVTREGSKSI 1476
>CE14110 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1026
Score = 115 bits (288), Expect = 3e-25
Identities = 63/168 (37%), Positives = 101/168 (59%), Gaps = 11/168 (6%)
Query: 668 ESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFL 727
E +K+V++S +T L+L+EK + + + G + + RQ+ VD FN +G + L
Sbjct: 854 EKKEKVVIVSQWTSVLNLVEKHIQAGGHNYTSITGQVLVKDRQERVDSFNQEKGGAQVML 913
Query: 728 LSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIY--------RFI 779
LS AGG G+NLIG N LI++D WNPA +QQA R++R GQKK+ FI+ R I
Sbjct: 914 LSLTAGGVGLNLIGGNHLIMVDLHWNPALEQQACDRIYRMGQKKEVFIHRLNISKFCRLI 973
Query: 780 STGTIEEKIFQRQSMKMSLSSCVVD--EKEDVERLFSSDNLKQLFKLD 825
GTIE+++ Q K++L++ V++ + +L ++D ++ LF LD
Sbjct: 974 VKGTIEQRVMDLQEKKLALAASVLEGTATRKLNKLTTAD-IRMLFGLD 1020
>YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1514
Score = 115 bits (287), Expect = 4e-25
Identities = 91/325 (28%), Positives = 159/325 (48%), Gaps = 43/325 (13%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
I+ADEMGLGKT+Q ++L+ + + + + +IV P+S++ NW E ++ PG
Sbjct: 718 ILADEMGLGKTIQTISLLAYLACE----KENWGPHLIVVPTSVLLNWEMEFKRF-APG-F 771
Query: 389 SSLAIDG----KKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEV 444
L G +K N D+ V I+SY + ++ K
Sbjct: 772 KVLTYYGSPQQRKEKRKGWNKPDAFH-------------VCIVSYQLVVQDQHSFKRKRW 818
Query: 445 GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLL--- 501
M+ DE H +KN S + AL + RR++L+GTP+QN+L+E ++LL F P +
Sbjct: 819 QYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDG 878
Query: 502 ------GSRNDFRKNFELP---ILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNN 552
+ F++ F P I+++ + D+E K + +L ++ +++RR
Sbjct: 879 KKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDKET---KKTVAKLHQVLRPYLLRRLKA 935
Query: 553 ILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKK--IVKGDSNQPLKAIGLLKKLCN 610
+ K +P KYEH+++ L+ Q+ LY F+ SRA K + G+ + + L+K+CN
Sbjct: 936 DVEKQMPAKYEHIVYCKLSKRQRFLYDDFM-SRAQTKATLASGNFMSIVNCLMQLRKVCN 994
Query: 611 HPDLLELSEDIPG--SEELIPDDYQ 633
HP+L E+ + E + DY+
Sbjct: 995 HPNLFEVRPILTSFVLEHCVASDYK 1019
Score = 113 bits (283), Expect = 1e-24
Identities = 63/168 (37%), Positives = 98/168 (57%), Gaps = 2/168 (1%)
Query: 654 KFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLV 713
K LA L ++K ++ + ++ + T+ LD++E+ + Y +RLDG I RQ L
Sbjct: 1247 KLQKLAILLQQLK-DNGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILT 1305
Query: 714 DRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDC 773
+RFN + + +F+LSS++GG GINL GA+ +I D DWNPA D+Q R R GQ +D
Sbjct: 1306 ERFNT-DSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDV 1364
Query: 774 FIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQL 821
IYRF+S TIE I ++ + K L + V+ E + FS +++ L
Sbjct: 1365 HIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDFTTDYFSKLSVRDL 1412
>HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 757
Score = 114 bits (286), Expect = 5e-25
Identities = 57/158 (36%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Query: 672 KIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSK 731
K+++ S + LD++E Y R+DG + N RQ +DRF P+ F+FLL ++
Sbjct: 24 KVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTR 83
Query: 732 AGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQR 791
AGG GINL A+ I+ D DWNP D QA AR R GQ K +YR I+ + E ++F +
Sbjct: 84 AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDK 143
Query: 792 QSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTKTI 829
S+K+ L V+ +D+ R ++ ++QL K++ + +
Sbjct: 144 ASLKLGLDKAVL---QDINRKGGTNGVQQLSKMEVEDL 178
>Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 2971
Score = 114 bits (286), Expect = 5e-25
Identities = 79/290 (27%), Positives = 144/290 (49%), Gaps = 23/290 (7%)
Query: 329 IMADEMGLGKTLQCLALMWTML-KQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGS 387
I+ADEMGLGKT+Q ++L+ + ++G G +I+ P+S++ NW E+ +W
Sbjct: 443 ILADEMGLGKTIQTISLLAHLACEKGNWGPH-----LIIVPTSVMLNWEMELKRWCPSFK 497
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLM 447
+ + K+ L W + V I SY + ++ + + +
Sbjct: 498 ILTYYGAQKERKLKRQG-------WTKPNAFH----VCITSYKLVLQDHQAFRRKNWRYL 546
Query: 448 LADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDF 507
+ DE +KN S + +L + RR++L+GTP+QN L E ++L++F P + S +F
Sbjct: 547 ILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREF 606
Query: 508 RKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIF 567
++ F P+ + +E G +++L ++ F++RR + K +P KYEHVI
Sbjct: 607 KEWFSNPL---TGMIEGSQEYNEG--LVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIR 661
Query: 568 INLTPFQQSLYQHFIESRAVKK-IVKGDSNQPLKAIGLLKKLCNHPDLLE 616
L+ Q+ LY F+ K+ + G + + L+K+CNHP+L +
Sbjct: 662 CRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINILMQLRKVCNHPNLFD 711
Score = 114 bits (285), Expect = 7e-25
Identities = 59/171 (34%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 654 KFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLV 713
K LA L ++K E + ++++ + T+ LD++E+ + + LRLDG+ + +RQ L+
Sbjct: 1785 KLQTLAVLLRQLKAEGH-RVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 1843
Query: 714 DRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDC 773
+RFN + + F F+LS+++GG G+NL GA+ ++ D DWNP D QA R R GQ +D
Sbjct: 1844 ERFN-ADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 1902
Query: 774 FIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKL 824
IYR IS T+EE I ++ + K L ++ F +++LF +
Sbjct: 1903 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDM 1953
>At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1277
Score = 113 bits (282), Expect = 1e-24
Identities = 69/174 (39%), Positives = 104/174 (59%), Gaps = 6/174 (3%)
Query: 652 SSKFSVLARFLYKIKTE-SNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQ 710
SSK S L + L KIK S +K ++ S +T LDL+E + LR DG + R+
Sbjct: 1108 SSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGRE 1167
Query: 711 KLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQK 770
K++ FN+ + Q+ I L+S KAGG G+NL A+ + L+DP WNPA ++QA+ R+ R GQK
Sbjct: 1168 KVLKEFNETK-QKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQK 1226
Query: 771 KDCFIYRFISTGTIEEKIFQRQSMKM-SLSSCVVDEKEDVERLFSSDNLKQLFK 823
+ F+ RFI T+EE++ Q Q+ K ++ + DE+ RL + LK LF+
Sbjct: 1227 RTVFVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARL---EELKMLFR 1277
>Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 336
Score = 112 bits (281), Expect = 2e-24
Identities = 96/363 (26%), Positives = 171/363 (46%), Gaps = 43/363 (11%)
Query: 334 MGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAI 393
MGLGKT+Q + ++ +L G +G +I+ P S + NW E W ++ +
Sbjct: 1 MGLGKTIQSITFLYEILLTGIRG-----PFLIIAPLSTIANWEREFRTWT---DINVVVY 52
Query: 394 DGKKSSLNNGNVADSVSHWASAQGRNIVKP----VLIISYDTLRRNVEQLKNCEVGLMLA 449
G S ++ + ++ +QGR I +I +++ + +L E ++
Sbjct: 53 HG--SLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVII 110
Query: 450 DEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRK 509
DE HRLKN + L + +V+L+GTP+QN + E F+LL+F P S + F +
Sbjct: 111 DEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQ 170
Query: 510 NFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFIN 569
F L T+E+V ++L I+ ++RR + K L K E +I +
Sbjct: 171 EF--------GDLETEEQV-------QKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVE 215
Query: 570 LTPFQQSLYQHFIESR-AVKKIVKGDSNQP--LKAIGLLKKLCNHPDLLELSEDIPGSEE 626
LT Q+ Y+ +E + G +N P + + L+K CNHP L I G+EE
Sbjct: 216 LTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYL------IKGAEE 269
Query: 627 LIPDDYQSSVDSRTS--RNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLD 684
I +++ + + S +++IQ+A K ++ + L K+K K+++ S + LD
Sbjct: 270 KILGEFRDTYNPAASDFHLQAMIQSA--GKLVLIDKLLPKMKA-GGHKVLIFSQMVRCLD 326
Query: 685 LIE 687
++E
Sbjct: 327 ILE 329
>CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1274
Score = 112 bits (280), Expect = 3e-24
Identities = 72/228 (31%), Positives = 113/228 (48%), Gaps = 17/228 (7%)
Query: 667 TESNDKIVLISNYTQTLDLIEKMC--------------FSNHYGVLRLDGTMNINKRQKL 712
T+ +KI++ S LD++E++ + + LRLDGT + R+KL
Sbjct: 790 TQIGEKILIFSQNLTALDMLEEILKKRQIRGKDGPGQRWEKNRNYLRLDGTTSGADREKL 849
Query: 713 VDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKD 772
++RFN G +FL+S++AG GINL+ ANR I++D WNP D QA+ RV+R GQ+K
Sbjct: 850 INRFNSEPGLS-LFLISTRAGSLGINLVSANRCIIIDACWNPCHDAQAVCRVYRYGQQKK 908
Query: 773 CFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTKTICDT 832
F+YR I ++E IF RQ K L VVD+ + V+ S L+ L D +
Sbjct: 909 TFVYRLIMDNSMERSIFNRQISKHGLQQRVVDDAQ-VDANISQKELETLLMYDEAQDVN- 966
Query: 833 HETYNCKRCKNGKQILKAPVMLYGDATSWNHLNHDALAKTNDHLLKNE 880
H+ +N G +L + + H+ L ++ L +
Sbjct: 967 HDKWNTDDWDFGDPVLDSITKRMSQMFAGKPFLHETLIMESEQSLSEQ 1014
Score = 109 bits (273), Expect = 2e-23
Identities = 58/171 (33%), Positives = 96/171 (55%), Gaps = 1/171 (0%)
Query: 446 LMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRN 505
L++ DEGH++KN + L +I RR++L+G P+QN+L EYF +++F P LG+R
Sbjct: 459 LVVCDEGHKIKNITAEISMTLGAINTKRRIVLTGYPLQNNLLEYFCMIDFVRPKYLGTRK 518
Query: 506 DFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHV 565
F FE PI + ++ ++V + R L +V F+ RRT+++L K LP E+V
Sbjct: 519 SFIDRFEKPIKNGQCVDSSPDDVKIALQRTHVLVELVKGFVQRRTHHLLKKILPESKEYV 578
Query: 566 IFINLTPFQQSLYQHFIESRAVKKIVKGDS-NQPLKAIGLLKKLCNHPDLL 615
+ + + Q+ LY++F+ + D+ PL A K+ NHPD+L
Sbjct: 579 LLLRKSQIQRQLYRNFVLWAKNEIAANNDAVFNPLMAFSACSKIWNHPDIL 629
>ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 883
Score = 111 bits (277), Expect = 6e-24
Identities = 59/152 (38%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 652 SSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQK 711
S K VL L K+K E + ++++ T+ +DLIE Y LRLDG++ + R +
Sbjct: 725 SGKLVVLDELLPKLKAEGH-RLLMYFQMTRMIDLIEDYLVRKGYTYLRLDGSLKASARAE 783
Query: 712 LVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKK 771
++ + + +FIFLLS++AGG GINL A+ ++ D DWNP ADQQA+ R R GQ +
Sbjct: 784 VIRDWQASD--KFIFLLSTRAGGLGINLTAADTVVFYDSDWNPTADQQAMDRAHRLGQTR 841
Query: 772 DCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV 803
D +YR I+ GT+EEK+ + + K + V+
Sbjct: 842 DVTVYRLITRGTVEEKVLESANRKDEIQKMVI 873
Score = 100 bits (249), Expect = 1e-20
Identities = 86/296 (29%), Positives = 144/296 (48%), Gaps = 41/296 (13%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQ----GPQGRRSIDKCIIVCPSSLVNNWANEIDKWLG 384
I+AD+MGLGKT+Q ++L+ + + GP ++V SS ++NWA E ++L
Sbjct: 297 ILADDMGLGKTVQSISLLAHLYETEEVPGP--------FLVVTISSTLDNWAQEFARFL- 347
Query: 385 PGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEV 444
S + S S + R V+I +Y T + + LK +
Sbjct: 348 -------------PSFRVCRFSGSPSERKELKKRFKNSDVVITTYQTAVSDEKMLKKIKW 394
Query: 445 GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSR 504
M+ DE +K++ S + L S + R++L+GTPIQN + E +ALL+F P L S
Sbjct: 395 QYMILDEAQAIKSSMSRRWKTLLSFKARNRLLLTGTPIQNSMQELWALLHFIMPTLFDSL 454
Query: 505 NDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEH 564
N+F F I S T +E + L++L I+ F++RR + + L K +
Sbjct: 455 NEFSDWFSKEIETSAIMKKTVDEKS-----LQRLHAILKPFMLRRHKSDVIHELGQKTQI 509
Query: 565 VIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGL-LKKLCNHPDLLELSE 619
++ +L+ Q+ LY K+I + S+ ++ + + LKK+CNHPDL + E
Sbjct: 510 DLYCDLSYRQKVLY---------KEITRSCSSMEMENLLMQLKKVCNHPDLFKKLE 556
>At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1029
Score = 110 bits (274), Expect = 1e-23
Identities = 64/171 (37%), Positives = 103/171 (59%), Gaps = 4/171 (2%)
Query: 652 SSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQK 711
SSK + L L +++ S K +L S +T LDL++ N++ +RLDGT++ +R+K
Sbjct: 862 SSKITALLEELEGLRS-SGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREK 920
Query: 712 LVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKK 771
++ F++ +G + L+S KAGG GINL A+ ++DP WNPA ++QA+ R+ R GQ K
Sbjct: 921 VLKEFSE-DGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTK 979
Query: 772 DCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLF 822
+ I RFI GT+EE++ Q+ K + S + ++E R + LK LF
Sbjct: 980 EVKIRRFIVKGTVEERMEAVQARKQRMISGALTDQE--VRSARIEELKMLF 1028
Score = 63.5 bits (153), Expect = 1e-09
Identities = 82/356 (23%), Positives = 141/356 (39%), Gaps = 93/356 (26%)
Query: 325 AYGCIMADEMGLGKTLQCLALM----WTMLKQG-----PQGRRSIDKCI----------- 364
A G I+AD MGLGKT+ ++L+ W G +G + I +
Sbjct: 412 ARGGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKAT 471
Query: 365 ----------------------IVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNN 402
IVCP +L+ W EI+ PGSLS G+ +
Sbjct: 472 KFLGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDA 531
Query: 403 GNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCE-VGL-------MLADEGHR 454
++ S V+I +Y L Q + + G+ ++ DE H
Sbjct: 532 KLLSQS--------------DVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHT 577
Query: 455 LKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELP 514
+KN+ S A ++ RR L+GTPIQN+L + ++LL F G+ + K + P
Sbjct: 578 IKNSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKP 637
Query: 515 ILQSRDSLATDEEVTLGKDR-LRQLSNIVSKFIIRRTNNILAK------YLPCKYEHVIF 567
+ G +R L+ + +I+ ++RRT + + LP VI+
Sbjct: 638 FEE-------------GDERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIY 684
Query: 568 INLTPFQQSLYQHFIESRAVK--------KIVKGDSNQPLKAIGLLKKLCNHPDLL 615
L+ ++ Y + VK K++ ++ L+ + L++ C+HP L+
Sbjct: 685 CELSESERDFYDALFKRSKVKFDQFVEQGKVLHNYAS-ILELLLRLRQCCDHPFLV 739
>At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 881
Score = 105 bits (261), Expect = 4e-22
Identities = 61/166 (36%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 637 DSRTSRNRSVIQTAFSSKFSVLARFLYKIKTES-NDKIVLISNYTQTLDLIEKMCFSNHY 695
DS + + SSK S L L + E+ N K V+ S + + L L+E + +
Sbjct: 691 DSSNTDGEDAKSSTKSSKVSALLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGF 750
Query: 696 GVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSS-KAGGCGINLIGANRLILLDPDWNP 754
+LRLDG M + KR +++ F +PE + LL+S KA G GINL A+R+ L DP WNP
Sbjct: 751 TILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNP 810
Query: 755 AADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSS 800
A ++QA+ R+ R GQK++ + R I+ +IEE++ + Q K +L++
Sbjct: 811 AVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLAN 856
Score = 64.3 bits (155), Expect = 8e-10
Identities = 82/369 (22%), Positives = 144/369 (38%), Gaps = 87/369 (23%)
Query: 304 ETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMW---------------- 347
E D L + + R G + AD+MGLGKTL L+L+
Sbjct: 257 EKDGEFLNTLTNYRSDKRPDPLRGGVFADDMGLGKTLTLLSLIAFDRYGNASTSTPTEEP 316
Query: 348 ------TMLKQGPQGRR----------------------SIDKCIIVCPSSLVNNWANEI 379
+ K+G + R S +IVCP S+++ W ++
Sbjct: 317 LDGEGDKIEKKGKKRGRGKSSESVTRKKLKTDDVVGMNVSQKTTLIVCPPSVISAWITQL 376
Query: 380 DKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQ- 438
++ PG L G G D V+ +++ +Y TL VE+
Sbjct: 377 EEHTVPGILKVYMYHG-------GERTDDVNELMKYD-------IVLTTYGTLA--VEES 420
Query: 439 -----LKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALL 493
+K E ++ DE H +KNA++ + ++ RR ++GTPIQN + ++L+
Sbjct: 421 WEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLM 480
Query: 494 NFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNI 553
F ++ ++ + P+ Q K L +L +++ +RRT
Sbjct: 481 AFLRFEPFSIKSYWQSLIQRPLGQG------------NKKGLSRLQVLMATISLRRTKEK 528
Query: 554 LAKYLPCKYEHVIFINLTPFQQSLYQHFIESRA---VKKIVKGDS-----NQPLKAIGLL 605
LP K ++ L+P ++ LY H +E A V+ ++ S + L I L
Sbjct: 529 SLIGLPPKTVETCYVELSPEERQLYDH-MEGEAKGVVQNLINNGSLMRNYSTVLSIILRL 587
Query: 606 KKLCNHPDL 614
++LC+ L
Sbjct: 588 RQLCDDMSL 596
>Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1009
Score = 104 bits (259), Expect = 7e-22
Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 638 SRTSRNRSVIQTAFSSKFSVLARFLYKIKTES-NDKIVLISNYTQTLDLIEKMCFSNHYG 696
+R S +S ++ SSK + L L ++ ++ N K +++S +T L LIE ++ +
Sbjct: 818 ARDSEKKSDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFV 877
Query: 697 VLRLDGTMNINKRQKLVDRFNDPE-GQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPA 755
RLDG+M KR + + F + E G I LLS KAGG G+NL A+R+ L+DP WNPA
Sbjct: 878 FTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPA 937
Query: 756 ADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSS 815
A+ Q R R GQK++ I +FI ++EE + + Q+ K L++ K+ ++
Sbjct: 938 AEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKKP-----NA 992
Query: 816 DNLKQLFKLDTKTICD 831
D +KQ + +T+ D
Sbjct: 993 DEMKQAKINEIRTLID 1008
Score = 57.4 bits (137), Expect = 1e-07
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 43/267 (16%)
Query: 349 MLKQGP---QGRRSID------KCIIVCPSSLVNNWANEIDKWLGPG-SLSSLAIDGKKS 398
MLK+G +G + D +I+CP S+++NW ++ + + L+ G
Sbjct: 455 MLKKGACAVEGSKKTDVEERPRTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGP-- 512
Query: 399 SLNNGNVADSVSHWASAQGRNIVKPVL-IISYDTLRRNVEQLKNCEVGLMLADEGHRLKN 457
D + A ++IV I+++D + L + ++ DEGH ++N
Sbjct: 513 --------DRIREPALLSKQDIVLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRN 564
Query: 458 ADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQ 517
++ A+ + RR +L+GTPIQN L + ++LL+F R + + + P
Sbjct: 565 PNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLLSFLKLKPFIDREWWHRTIQRP--- 621
Query: 518 SRDSLATDEEVTLGKD-RLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQS 576
VT+G + LR+L +++ +RRT K P + P ++
Sbjct: 622 ----------VTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKP--------VLELPERKV 663
Query: 577 LYQHFIESRAVKKIVKGDSNQPLKAIG 603
QH S +KI + N+ IG
Sbjct: 664 FIQHITLSDEERKIYQSVKNEGRATIG 690
>7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2237
Score = 103 bits (257), Expect = 1e-21
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 326 YGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGP 385
+ CI+ADEMGLGKT+Q L + ++ + G +G +++ P S + NW E + W
Sbjct: 2041 HNCILADEMGLGKTIQSLTFVHSVYEYGIRG-----PFLVIAPLSTIPNWQREFEGWT-- 2093
Query: 386 GSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP----VLIISYDTLRRNVEQLKN 441
++ + G +S + D ++ + G+ + +P VLI +++ + + LK
Sbjct: 2094 -DMNVVVYHGSVTSKQM--IQDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTDYMDLKA 2150
Query: 442 CEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLL 501
L + DE HRLKN + L + RV+LSGTP+QN++SE F+LLNF P
Sbjct: 2151 FNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQF 2210
Query: 502 GSRNDFRKNFELPILQSRDSLATDEE 527
S+ +F F SL T+EE
Sbjct: 2211 SSQEEFMSEF--------GSLRTEEE 2228
>At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 1178
Score = 101 bits (252), Expect = 4e-21
Identities = 128/504 (25%), Positives = 208/504 (40%), Gaps = 69/504 (13%)
Query: 328 CIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGS 387
C +ADEMGLGKTLQ +A+ + +G ++VCP+ L WA E+++WL
Sbjct: 222 CFIADEMGLGKTLQAIAIAGCFISEG--------SILVVCPAVLRFTWAEELERWLP--- 270
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLM 447
S L D + N A + W V++ISY L+ + E L+
Sbjct: 271 -SCLPSDVHLVFGHQDNPA-YLPRWPK---------VVVISYKMLQHLRTTMLEREWALL 319
Query: 448 LADEGHRL----KNADSLTF-TALDSIRCPRRVI-LSGTPIQNDLSEYFALLNFSNPGLL 501
+ DE H L K +D T LD + +I LSGTP + S PGLL
Sbjct: 320 IVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTP------------SVSRPGLL 367
Query: 502 G-SRNDFRKNF-ELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFI-IRRTNNILAKYL 558
G + +F K + E+ +++ ++ + G RL +L+ ++++ + IRR L L
Sbjct: 368 GKDKYEFAKTYCEVGLVRGIQG-KIFQDFSKG-TRLLELNILLNQTVMIRRLKQHLLTQL 425
Query: 559 PCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELS 618
P K ++ I L +L IV Q AI + + + PD
Sbjct: 426 PPKRRQIVTILLKKSDIAL---------AMAIVSEAKKQKDGAIAEVTEKSHEPDQNARG 476
Query: 619 EDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFL----------YKIK-- 666
+ G D +S + Q +K S +L Y +
Sbjct: 477 SNEAGHVNAENSDGPNSDKENQLCGKLSYQQLGIAKLSAFREWLSLHPLLSGLDYTPEEI 536
Query: 667 --TESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEF 724
S+ K+V+ +++ + LD I++ G +R+DGT RQ V F +
Sbjct: 537 DGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQF-SSEVK 595
Query: 725 IFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTI 784
I ++ +AGG G++ A ++ L+ P+ QA R R GQ +Y F + T+
Sbjct: 596 IAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTM 655
Query: 785 EEKIFQRQSMKMSLSSCVVDEKED 808
+E +Q + K+ S D K D
Sbjct: 656 DESNWQNLNKKLHRISSTTDGKYD 679
>CE11450 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 518
Score = 101 bits (251), Expect = 6e-21
Identities = 57/140 (40%), Positives = 85/140 (60%), Gaps = 3/140 (2%)
Query: 695 YGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNP 754
+G + G + I RQ+ VD FN +G LLS AGG G+NLIG N LI++D WNP
Sbjct: 380 HGYTSITGEVAIKDRQERVDSFNQEKGGAQDMLLSLTAGGVGLNLIGGNHLIMVDLHWNP 439
Query: 755 AADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD--EKEDVERL 812
A +QQA R++R GQKK+ I+R I TIE+++ Q K++L++ V++ + +L
Sbjct: 440 ALEQQACDRIYRMGQKKEVHIHRLIVKETIEQRVMSLQEKKLALAASVLEGSATRGMNKL 499
Query: 813 FSSDNLKQLFKLDTKTICDT 832
+SD ++ LF LD + DT
Sbjct: 500 TNSD-IRTLFGLDEEFELDT 518
>SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 897
Score = 100 bits (250), Expect = 8e-21
Identities = 63/164 (38%), Positives = 97/164 (58%), Gaps = 4/164 (2%)
Query: 665 IKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEF 724
I ++ N+KI++ S ++Q L L+ M + +R DGTM+ N+RQK + FN+ +
Sbjct: 736 IGSKRNEKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDK-DVL 794
Query: 725 IFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTI 784
+ L+S KAG G+NL AN +IL +P +NP+ + QA+ RV R GQ+K +YRFI+ TI
Sbjct: 795 VMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTI 854
Query: 785 EEKIFQRQSMKMSLSSCVVDEKED--VERLFSSDNLKQLFKLDT 826
EE+I Q K L +D E+ + RL + L LF L++
Sbjct: 855 EERIVSVQRKKRQLVKEALDSNENNPLSRL-DKEELLYLFGLNS 897
Score = 89.4 bits (220), Expect = 2e-17
Identities = 77/322 (23%), Positives = 139/322 (42%), Gaps = 35/322 (10%)
Query: 318 ENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWAN 377
E+ G +MAD+MGLGKT+Q +AL+ T Q P + ++ IV +L++ WA
Sbjct: 262 ESMEQSSKCGGVMADDMGLGKTIQTIALLLTQKSQDPLRKTNL----IVVSVALLHQWAE 317
Query: 378 EIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVE 437
E+ + P S+ I ++G+ ++ + +Q ++ +++Y+ + +
Sbjct: 318 ELSTKVHPSKKLSVYI-------HHGSTKKNLDSYELSQYDVVLTTYSMLAYEMKQNDAF 370
Query: 438 QLKNCEVGL--------------MLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQ 483
N ++ DE H ++N D+L + R LSGTPIQ
Sbjct: 371 NNNNPATATPPPACSLLETSWYRIVLDEAHTIRNRDTLAAKCCVKLDAKYRWCLSGTPIQ 430
Query: 484 NDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVS 543
N + E+++LL F + F K+ P+ R + E L + R+ S +
Sbjct: 431 NHIDEFYSLLKFLRIKPYCVWSLFAKDISRPLKSYRADIV---EAALKRLRILLASTVFR 487
Query: 544 KFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIG 603
+ R NN+ LP K + +NL P +++LY + S +++ L G
Sbjct: 488 RTKETRVNNLPIVNLPPKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFNNDHDLSRYG 547
Query: 604 L-------LKKLCNHPDLLELS 618
L++ C HP L++ S
Sbjct: 548 FLLVSLLRLRQFCCHPWLVKSS 569
>ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 556
Score = 94.7 bits (234), Expect = 5e-19
Identities = 118/528 (22%), Positives = 213/528 (39%), Gaps = 109/528 (20%)
Query: 318 ENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWAN 377
E++ NRG I+AD+MGLGKT+Q LA+ + + P +I+ P+SL+ +WA+
Sbjct: 133 EHALNRGGR-MIVADDMGLGKTIQALAVAYYYRAEWP--------LVIIAPASLLEDWAD 183
Query: 378 EIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVE 437
++LG + ++ + K+ + + + ++SY+ +
Sbjct: 184 ACRRFLG---MEAMVMRRKE---------------------DFGQEIGVVSYEVASSHAN 219
Query: 438 QLKNCEVGLMLADEGHRLKNADSLTFTALDSI--RCPRRVILSGTPIQNDLSEYFALLNF 495
L C G+++ADE H LK+ + A+ + + R ++LSGTP + E + +++
Sbjct: 220 VLA-CGAGVVIADECHYLKSLQTKRTKAIVPLLQKVSRALLLSGTPAVSRPLELYPIISA 278
Query: 496 SNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFI-IRRTNNIL 554
+ R F + E G +L ++ KF+ IRRT + +
Sbjct: 279 VD------RTIFPRFAEYGARYCNGRKVGQWYDYKGCSNAEELHYVLRKFLMIRRTKDEV 332
Query: 555 AKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDL 614
LP K+ + + T G + P K DL
Sbjct: 333 LGQLPPKFRRQVVLECT---------------------GRQDDPRK------------DL 359
Query: 615 LELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIV 674
+ S D + Y+ +V + + + T E K V
Sbjct: 360 VGESVDTN-----VVMQYREAVGLKVDPVKQYLATM----------------VEKGMKFV 398
Query: 675 LISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGG 734
+ ++T+ ++ +E + ++R+DG++ R LV +F + E + + LLS A
Sbjct: 399 VFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRHLLVKKFQENE-EVMVALLSITACS 457
Query: 735 CGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSM 794
G+ L ++ + WNP QA R+ R GQK I ++ GTI+E ++ +
Sbjct: 458 TGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKSSVDIIYLVAKGTIDEYVWPKLLS 517
Query: 795 KMS-LSSCVVDEKEDVERLFSSDNLKQLFKLDTKTICDTHETYNCKRC 841
K++ L S V + SS Q KT+C +N KRC
Sbjct: 518 KLNVLESLGVGSNQLKNVGVSSQAAGQ------KTLCQ----FNIKRC 555
>7298962 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 965
Score = 94.0 bits (232), Expect = 9e-19
Identities = 55/175 (31%), Positives = 98/175 (55%), Gaps = 3/175 (1%)
Query: 652 SSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQK 711
S+K ++ L ++ T +NDKI++ S + L ++ K + L +G + +R+
Sbjct: 789 SAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREI 848
Query: 712 LVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKK 771
++ FN ++ + LLS AGG G+NL AN ++++D WNP ++QA R++R GQ K
Sbjct: 849 VLRDFN-ANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTK 907
Query: 772 DCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEK--EDVERLFSSDNLKQLFKL 824
FIYR++ T+E++I Q K+ ++ V+ E+ E + + NL +L KL
Sbjct: 908 PTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGGEVTKCVGGGLNLAELKKL 962
>At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1287
Score = 90.1 bits (222), Expect = 1e-17
Identities = 54/161 (33%), Positives = 87/161 (53%), Gaps = 5/161 (3%)
Query: 669 SNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFND-PEGQEFIFL 727
+ +K ++ S +T+ L+L+E S+H RLDGTM++ R K V FN PE + +
Sbjct: 1129 AGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVT--VMI 1186
Query: 728 LSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 787
+S KA G+N++ A +++LD WNP + QA+ R R GQ + + RF T+E++
Sbjct: 1187 MSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDR 1246
Query: 788 IFQRQSMK--MSLSSCVVDEKEDVERLFSSDNLKQLFKLDT 826
I Q K M S+ DEK + + ++L LF D+
Sbjct: 1247 ILALQQKKRMMVASAFGEDEKGSRQSHLTVEDLSYLFMADS 1287
>At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1056
Score = 88.6 bits (218), Expect = 4e-17
Identities = 55/154 (35%), Positives = 81/154 (51%), Gaps = 5/154 (3%)
Query: 672 KIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRF-NDPEGQEFIFLLSS 730
K ++ S +T LDL+E N RLDGTM++ R + V F NDP+ + + ++S
Sbjct: 903 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVK--VMIMSL 960
Query: 731 KAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKI-- 788
KAG G+N+I A +ILLD WNP + QA+ R R GQ + + R T+E++I
Sbjct: 961 KAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILA 1020
Query: 789 FQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLF 822
Q + KM S+ D + D+LK LF
Sbjct: 1021 LQEEKRKMVASAFGEDHGGSSATRLTVDDLKYLF 1054
>Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 3124
Score = 86.3 bits (212), Expect = 2e-16
Identities = 82/310 (26%), Positives = 136/310 (43%), Gaps = 32/310 (10%)
Query: 329 IMADEMGLGKTLQCLALMWTML-KQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGS 387
I+ADE GLGKT+Q +A + +G G ++V S + W E+ +W PG
Sbjct: 1077 ILADEAGLGKTVQIIAFFAHLACNEGNWGPH-----LVVVRSCNILKWELELKRWC-PG- 1129
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLM 447
L L+ G L WA + V I SY R + +
Sbjct: 1130 LKILSYIGSHRELKAKR-----QEWAEPNSFH----VCITSYTQFFRGLTAFTRVRWKCL 1180
Query: 448 LADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRNDF 507
+ DE R+K + A+ +++ +R++L +P+ N E + +++F PG+
Sbjct: 1181 VIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFLVPGI------- 1233
Query: 508 RKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIF 567
P L S ++E + +L + FI+RRT + K L KYEHV+
Sbjct: 1234 ----SRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLK 1289
Query: 568 INLTPFQQSLYQHFIESRAVKKIVK-GDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEE 626
L+ Q++LY+ I ++ +K G L + L+++CNHP L+E PGS
Sbjct: 1290 CRLSNRQKALYEDVILQPGTQEALKSGHFVNVLSILVRLQRICNHPGLVEPRH--PGSSY 1347
Query: 627 LI-PDDYQSS 635
+ P +Y S+
Sbjct: 1348 VAGPLEYPSA 1357
Score = 73.6 bits (179), Expect = 1e-12
Identities = 52/186 (27%), Positives = 93/186 (49%), Gaps = 14/186 (7%)
Query: 652 SSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQK 711
S K LA L K+K+E +++++S LD++E ++ +R+D + +RQ+
Sbjct: 1861 SGKLEALAILLQKLKSEGR-RVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQE 1919
Query: 712 LVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKK 771
L+ FN + + F +LS+ + GINL+ A+ ++ D D NP D +A R G+ K
Sbjct: 1920 LMRSFNR-DRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCK 1978
Query: 772 DCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKLDTKTICD 831
D IYR +S +IEEK+ + + K+ + + + N + L +TI +
Sbjct: 1979 DIHIYRLVSGNSIEEKLLKNGT------------KDLIREVAAQGNDYSMAFLTQRTIQE 2026
Query: 832 THETYN 837
E Y+
Sbjct: 2027 LFEVYS 2032
>At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 833
Score = 86.3 bits (212), Expect = 2e-16
Identities = 49/161 (30%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
Query: 663 YKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFN-DPEG 721
+ ++ + + K ++ S +T LDLI ++L G+M + R +++F DP+
Sbjct: 673 FMVERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDC 732
Query: 722 QEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFIST 781
+ +FL+S KAGG +NL A+ + ++DP WNPA ++QA R+ R GQ K + RFI
Sbjct: 733 R--VFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIE 790
Query: 782 GTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLF 822
T+EE+I + Q K + V ++ + ++++ LF
Sbjct: 791 NTVEERILRLQKKKELVFEGTVGGSQEAIGKLTEEDMRFLF 831
Score = 52.8 bits (125), Expect = 2e-06
Identities = 29/84 (34%), Positives = 44/84 (51%), Gaps = 17/84 (20%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKC---------IIVCPSSLVNNWAN 377
G I+ADEMG+GKT+Q ++L+ RR +D+ +++CP V+ W N
Sbjct: 159 GGILADEMGMGKTIQAISLVLA--------RREVDRAQFGEAAGCTLVLCPLVAVSQWLN 210
Query: 378 EIDKWLGPGSLSSLAIDGKKSSLN 401
EI ++ PGS L G K + N
Sbjct: 211 EIARFTSPGSTKVLVYHGAKRAKN 234
>YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1169
Score = 85.5 bits (210), Expect = 3e-16
Identities = 57/197 (28%), Positives = 106/197 (52%), Gaps = 7/197 (3%)
Query: 633 QSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTES-NDKIVLISNYTQTLDLIEKMC- 690
Q++ +S+ + + SSK + L + L ++ S +++V+ S ++ LD++EK
Sbjct: 974 QTNSNSKNLEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELT 1033
Query: 691 --FSNHYG-VLRLDGTMNINKRQKLVDRFNDPE-GQEFIFLLSSKAGGCGINLIGANRLI 746
FS + + DG +++ +R ++ F + ++ I LLS KAGG G+NL A+
Sbjct: 1034 HTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAY 1093
Query: 747 LLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEK 806
++DP W+P+ + QA+ R+ R GQ + RFI +IEEK+ + Q K ++ +D
Sbjct: 1094 MMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGE-AMDTD 1152
Query: 807 EDVERLFSSDNLKQLFK 823
ED R + ++ LF+
Sbjct: 1153 EDERRKRRIEEIQMLFE 1169
>SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 963
Score = 85.5 bits (210), Expect = 3e-16
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 2/172 (1%)
Query: 652 SSKFSVLARFLYKIKTESND-KIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQ 710
S+K L LY ++ + K ++ S +T LDLI + ++LDG M R
Sbjct: 791 STKIEALVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARA 850
Query: 711 KLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQK 770
++ F++ + IFL+S KAGG +NL A+++ ++DP WN A QA+ R+ R GQK
Sbjct: 851 ATIEAFSN-DINITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQK 909
Query: 771 KDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLF 822
+ + +IE KI + Q K + +D+ E S ++++ LF
Sbjct: 910 RPIKVITLCIENSIESKIIELQEKKAQMIHATIDQDEKALNQLSVEDMQFLF 961
Score = 68.9 bits (167), Expect = 3e-11
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 21/219 (9%)
Query: 286 EKADTQADSNITGSKSPVETDVSSL---KDVIKINENSRNRGAYGCIMADEMGLGKTLQC 342
EK + +A + + P E ++ L ++ + + + G I+ADEMG+GKT+Q
Sbjct: 334 EKLEEEAPREVKQIEQPKELVLNLLPFQREGVYWLKRQEDSSFGGGILADEMGMGKTIQT 393
Query: 343 LALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNN 402
+AL L P+G+ ++ +V P + W EID +LS+ G+ ++
Sbjct: 394 IAL----LLSEPRGKPTL----VVAPVVAIMQWKEEIDTHTNK-ALSTYLYYGQARDISG 444
Query: 403 GNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKN------CEVGLMLADEGHRLK 456
++ S+ N+++ V RR +K E ++ DE H +K
Sbjct: 445 EELS---SYDVVLTSYNVIESVYRKERSGFRRKNGVVKEKSLLHQMEFYRIILDEAHGIK 501
Query: 457 NADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNF 495
+ T A+ +R R++ LSGTP+QN + E F+LL F
Sbjct: 502 SRTCNTARAVCGLRTTRKICLSGTPLQNRIGELFSLLRF 540
>YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 790
Score = 85.1 bits (209), Expect = 4e-16
Identities = 53/172 (30%), Positives = 92/172 (52%), Gaps = 2/172 (1%)
Query: 652 SSKFSVLARFLYKIKTESND-KIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQ 710
S+K L LYK+++ K ++ S +T LDL+E + ++L G+M+ +R
Sbjct: 618 STKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRD 677
Query: 711 KLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQK 770
+ + F + E +FL+S KAGG +NL A+++ +LDP WNP+ + Q+ RV R GQ
Sbjct: 678 ETIKYFMNNIQCE-VFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQY 736
Query: 771 KDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLF 822
+ I RF +IE +I + Q K ++ +++ E + +L+ LF
Sbjct: 737 RPVKITRFCIEDSIEARIIELQEKKANMIHATINQDEAAISRLTPADLQFLF 788
Score = 70.9 bits (172), Expect = 9e-12
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 32/184 (17%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPG 386
G ++ADEMG+GKT+Q +AL+ L + P ++V P+ + W NEI++ G
Sbjct: 205 GGVLADEMGMGKTIQTIALLMNDLTKSPS--------LVVAPTVALMQWKNEIEQHT-KG 255
Query: 387 SLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLII--------SYDTLRRN--- 435
L G A + QG ++V + +Y R+N
Sbjct: 256 QLKIYIYHG----------ASRTTDIKDLQGYDVVLTTYAVLESVFRKQNYGFRRKNGLF 305
Query: 436 --VEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALL 493
L N + ++ DE H +K+ S T A+++++ +R LSGTP+QN + E ++L+
Sbjct: 306 KQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLSGTPLQNRIGEMYSLI 365
Query: 494 NFSN 497
F N
Sbjct: 366 RFLN 369
>SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1040
Score = 83.6 bits (205), Expect = 1e-15
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 626 ELIPDDYQSSVDSR-------TSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISN 678
EL+P Y + +++R T T + + IK + DKI++ S
Sbjct: 835 ELLPKQYSNILENRQMGMKIFTDPKHWTTSTKIEKALNAVKEI---IKKQPTDKILIFSQ 891
Query: 679 YTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFN-DPEGQEFIFLLSSKAGGCGI 737
+ L+L L G ++ +R + + F DP + + L+S KAG G+
Sbjct: 892 FVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVR--VLLISLKAGNVGL 949
Query: 738 NLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMS 797
NL AN +I+LDP WNP ++QA+ R R GQ K I R ++ TIEE++ Q K
Sbjct: 950 NLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLALQDRKRE 1009
Query: 798 LSSCVVDEKEDVERLFSSDNLKQLFKLDTKTI 829
L + EK L+++ +L+TK +
Sbjct: 1010 LIDSALGEK----------GLREISRLNTKEL 1031
>7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1477
Score = 83.6 bits (205), Expect = 1e-15
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 50/310 (16%)
Query: 319 NSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANE 378
N ++G G I+ADEMGLGKT+Q +A + + + + V +V W
Sbjct: 548 NIYDQGISG-ILADEMGLGKTVQSIAFLCHIAEHYG---------VFVPDFKVVPYW--- 594
Query: 379 IDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQ 438
GS + I + + + D+ H V+I SY + + +
Sbjct: 595 -------GSPAERKILRQFWDQKHLHTRDASFH------------VVITSYQLVVSDYKY 635
Query: 439 LKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNP 498
+ M+ DE +K+A S + L C R++LSGTPIQN ++E +ALL+F P
Sbjct: 636 FNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMP 695
Query: 499 GLLGSRNDFRKNFELPILQSRDSLATDEEVT-LGKDRLRQLSNIVSKFIIRRTNNILAKY 557
L S ++F + F S+D + E T + + ++ +L I+ F++RR +
Sbjct: 696 TLFDSHDEFNEWF------SKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENE 749
Query: 558 LPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIV-----------KGDSNQPLKAIGLLK 606
L K E +++ LT Q+ LY+ + ++ ++ ++ + + +
Sbjct: 750 LSDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFR 809
Query: 607 KLCNHPDLLE 616
K+CNHP+L E
Sbjct: 810 KVCNHPELFE 819
Score = 57.4 bits (137), Expect = 1e-07
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 652 SSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQK 711
+ K VL L ++K + ++++ S T+ +DL+E+ + + +RLDG+ I+ R+
Sbjct: 1086 AGKLFVLDNLLTRLKANGH-RVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRD 1144
Query: 712 LVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRL 745
+V F F+FLLS++AGG GINL A+ L
Sbjct: 1145 MVADFQT-RADIFVFLLSTRAGGLGINLTAADTL 1177
>At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1047
Score = 82.4 bits (202), Expect = 3e-15
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 672 KIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSK 731
K ++ S +T LDL+E + RLDGTM++ R + V F+ + + L+S K
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVK-VMLMSLK 952
Query: 732 AGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQR 791
AG G+N++ A +ILLD WNP + QA+ R R GQ + + R T+E++I +
Sbjct: 953 AGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKL 1012
Query: 792 QSMKMSLSSCVVDEK---EDVERLFSSDNLKQLF 822
Q K ++ + E+ RL + D+LK LF
Sbjct: 1013 QEEKRTMVASAFGEEHGGSSATRL-TVDDLKYLF 1045
>At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1648
Score = 82.0 bits (201), Expect = 4e-15
Identities = 60/216 (27%), Positives = 108/216 (49%), Gaps = 20/216 (9%)
Query: 634 SSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKT-ESNDKIVLISNYTQTLDLIEKMCFS 692
S D + S V+Q ++ +K + R + IK+ + K+++ S++ LD++E +
Sbjct: 1396 SDQDHKDSEASLVVQGSYGTKIEAVTRRILWIKSSDPQTKVLVFSSWNDVLDVLEHAFAA 1455
Query: 693 NHYGVLRLDGTMNINKRQKLVDRFNDPEGQEF-------------IFLLSSKAGGCGINL 739
N +R+ G K Q + +F E + + LL + G G+NL
Sbjct: 1456 NSITCIRMKGG---RKSQTAISKFKGSEKETQKTNSHQKEEKSIQVLLLLVQHGANGLNL 1512
Query: 740 IGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQ-RQSMKMSL 798
+ A +IL++P NPAA+ QA+ RV R GQ+K ++RF+ +GT+EE I++ ++ +L
Sbjct: 1513 LEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRFLVSGTVEESIYKLNRNKNTNL 1572
Query: 799 SSCVVDEKEDVERLFSSDNLKQLFKLDTKTICDTHE 834
SS ++ ++ F + LK L L +T E
Sbjct: 1573 SSFSSRNTKNQDQQFLT--LKDLESLFASPTAETAE 1606
>YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1619
Score = 81.6 bits (200), Expect = 5e-15
Identities = 50/189 (26%), Positives = 100/189 (52%), Gaps = 10/189 (5%)
Query: 624 SEELIPDDYQSSVDSRTSRNRSVIQTAF-----SSKFSVLARFLYKIKTES-NDKIVLIS 677
+EE + +Y S ++ + + ++V F S+K + + ++ ES +KI++ S
Sbjct: 1409 TEEDLHAEYLSEMEKQKIQQKNVYVPNFESLEPSTKIEQCIQVIQRVFDESATEKIIIFS 1468
Query: 678 NYTQTLDLIEKMCFSN-HYGVLRLDGTMNINKRQKLVDRF-NDPEGQEFIFLLSSKAGGC 735
+T +++E + ++ L+ G+MN +R +++ F DPE + I L+S KAG
Sbjct: 1469 QFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPEKR--ILLISMKAGNS 1526
Query: 736 GINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMK 795
G+ L AN ++++DP WNP ++QA R +R Q K +++ ++E++I + Q K
Sbjct: 1527 GLTLTCANHVVIVDPFWNPYVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRISELQKRK 1586
Query: 796 MSLSSCVVD 804
+ +D
Sbjct: 1587 KEMVDSAMD 1595
>SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1063
Score = 81.6 bits (200), Expect = 5e-15
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 48/207 (23%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQ----GPQGRRSIDKCIIVCPSSLVNNWANEIDKWLG 384
I+ADEMGLGKT+Q +++M + + GP +++ P+S ++NW EI +++
Sbjct: 864 ILADEMGLGKTVQSISVMAYLAETHNIWGP--------FLVIAPASTLHNWQQEITRFVP 915
Query: 385 PGSLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKP----------------VLIIS 428
+ +W S + R I++ V++ S
Sbjct: 916 K--------------------LKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTS 955
Query: 429 YDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSE 488
Y + + + ++ + M+ DE +K++ S + +L + +C R++L+GTPIQN + E
Sbjct: 956 YQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQE 1015
Query: 489 YFALLNFSNPGLLGSRNDFRKNFELPI 515
+ALL+F P L S N+F + F I
Sbjct: 1016 LWALLHFIMPSLFDSHNEFSEWFSKDI 1042
>At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1227
Score = 79.7 bits (195), Expect = 2e-14
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 622 PGSEELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQ 681
P S + +D S S N + +FS + + + + +K ++ + +T+
Sbjct: 1026 PQSPATVMNDVNQS--SENGENNQQLDKSFSLPATPAKSSVGGVVNVAGEKAIVFTQWTK 1083
Query: 682 TLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIG 741
LDL+E S+ R DG M + R V FN + ++S KA G+N++
Sbjct: 1084 MLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVS-VMIMSLKAASLGLNMVA 1142
Query: 742 ANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSC 801
A +I+LD WNP + QA+ R R GQ + + RF T+E++I Q K + +
Sbjct: 1143 ACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILALQQKKRKMVAS 1202
Query: 802 VVDEKEDVER--LFSSDNLKQLF 822
E E+ R S ++L LF
Sbjct: 1203 AFGEHENGSRESHLSVEDLNYLF 1225
>7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 701
Score = 75.9 bits (185), Expect = 3e-13
Identities = 107/487 (21%), Positives = 185/487 (37%), Gaps = 81/487 (16%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPS-SLVNNWANEIDKWLGPGS 387
++ DEMGLGKT Q LA+ P ++VC + S ++WA I L
Sbjct: 266 MICDEMGLGKTYQALAVADYFKDDWP---------LLVCTTASTRDSWAKHIMDLLPKVP 316
Query: 388 LSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLM 447
+ + + LNN + + VLI SY+ + R+ ++L + G +
Sbjct: 317 IHYVQV------LNNNQLYVGEAK------------VLITSYNMMERHEDKLMQRKFGFI 358
Query: 448 LADEGHRLKNADSLTFTALDSI--RCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSRN 505
+ DE H LKN+ + T + + R V+LSGTP + E F L +
Sbjct: 359 IFDESHTLKNSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMID-------G 411
Query: 506 DFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVS-KFIIRRTNNILAKYLPCKYEH 564
F E +T G+ L +L I+ K+++RRT + L K
Sbjct: 412 KFMNFMEFTTRYCDGKQSTFGWDANGQSNLEELKVILHLKYMLRRTKVEVLPQLAEKNRE 471
Query: 565 VIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGS 624
+ ++ + + A K N+ LK + +
Sbjct: 472 TVVLDPA---------LVWTNAETKETLDAFNKELK-----------------TAKGRAT 505
Query: 625 EELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLD 684
EE++ Y + + +T + ++T + K ++ +++ +D
Sbjct: 506 EEILLRFYARTAEVKTRAVCAYLKTL----------------VKEQKKFIIFAHHRVMMD 549
Query: 685 LIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANR 744
I +R+DG + R VD F + + LLS KA GI L A
Sbjct: 550 AISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCK-VALLSLKACNSGITLTAAEI 608
Query: 745 LILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 804
++ + DWNP+ QA +R R GQ K I+ T ++ I+ K + S V
Sbjct: 609 IVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNKQEVLSKVGI 668
Query: 805 EKEDVER 811
E++++
Sbjct: 669 FAENLQK 675
>Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 954
Score = 75.5 bits (184), Expect = 3e-13
Identities = 104/494 (21%), Positives = 196/494 (39%), Gaps = 79/494 (15%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSL 388
++AD+MGLGKT+Q + + K+ P ++V PSS+ W +WL SL
Sbjct: 455 LLADDMGLGKTIQAICIAAFYRKEWP--------LLVVVPSSVRFTWEQAFLRWL--PSL 504
Query: 389 SSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLML 448
S D ++ + + R + I+S+D L + +QLK +++
Sbjct: 505 S----------------PDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLKT-PFKVVI 547
Query: 449 ADEGHRLKNADSLTF-TALDSIRCPRRVI-LSGTPIQNDLSEYFALLNFSNPGLLGSRND 506
DE H LKN+ + A+ ++ +RVI LSGTP + +E + + P +
Sbjct: 548 IDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHA 607
Query: 507 FRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFI-IRRTNNILAKYLPCKYEHV 565
F + R D G L +L ++ + + +RR + + LP K +
Sbjct: 608 FGLRY---CDAKRMPWGWDYS---GSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKI 661
Query: 566 IFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSE 625
+ I P + + A K++ D + + L+
Sbjct: 662 VVI--APGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFF----------------- 702
Query: 626 ELIPDDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDL 685
+RT+ +K + ++ + +K ++ +++ LD
Sbjct: 703 ------------NRTA----------EAKIPSVIEYILDLLESGREKFLVFAHHKVVLDA 740
Query: 686 IEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRL 745
I + H +R+DG+ + +R+ L +F E + + +LS A G+ A+ +
Sbjct: 741 ITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSE-RHAVAVLSITAANMGLTFSSADLV 799
Query: 746 ILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMS-LSSCVVD 804
+ + WNP QA RV R GQ I+ ++ GT ++ ++ K+ L+ +
Sbjct: 800 VFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVLAEAGLS 859
Query: 805 EKEDVERLFSSDNL 818
E E S+D L
Sbjct: 860 ETNFSEMTESTDYL 873
>SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 430
Score = 75.1 bits (183), Expect = 5e-13
Identities = 38/86 (44%), Positives = 52/86 (60%)
Query: 718 DPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYR 777
DP+ +IF+LS++AGG G+NL A+ +I+ D DWNP D QA R R GQ K+ I R
Sbjct: 1 DPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILR 60
Query: 778 FISTGTIEEKIFQRQSMKMSLSSCVV 803
I+ +IEE I R K+ L V+
Sbjct: 61 LITEKSIEENILSRAQYKLDLDGKVI 86
>At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 638
Score = 72.0 bits (175), Expect = 4e-12
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 318 ENSRNRGAYGCIMADEMGLGKTLQCLALMW-----TMLKQGPQGRRSIDKCIIVCPSSLV 372
+ R+R G I+AD+ GLGKT+ ++L+ + KQ + ++ +IVCP+S+V
Sbjct: 67 KEKRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRKGQNSGGTLIVCPASVV 126
Query: 373 NNWANEI-DKWLGPGSLSSLAIDGKKSSLNNGNVA--DSVSHWASAQGRNIVKPVLIISY 429
WA E+ +K LS L G + + +A D V + + + ++ Y
Sbjct: 127 KQWAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMTTYAIVTNEVPQNPMLNRY 186
Query: 430 DTLRRNVE----QLKNCEVGLM--------LADEGHRLKNADSLTFTALDSIRCPRRVIL 477
D++R L VG + + DE H +KN +L A S+R RR L
Sbjct: 187 DSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRAKRRWCL 246
Query: 478 SGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPI 515
+GTPI+N + + ++ F N F + + PI
Sbjct: 247 TGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPI 284
Score = 60.1 bits (144), Expect = 2e-08
Identities = 31/90 (34%), Positives = 47/90 (51%)
Query: 717 NDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIY 776
N G L+S KAG G+N++ A+ +ILLD WNP + QA+ R R GQ + +
Sbjct: 501 NSISGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVT 560
Query: 777 RFISTGTIEEKIFQRQSMKMSLSSCVVDEK 806
R T+EE+I K ++ + + EK
Sbjct: 561 RIAIKNTVEERILTLHERKRNIVASALGEK 590
>7295362 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1270
Score = 72.0 bits (175), Expect = 4e-12
Identities = 61/197 (30%), Positives = 96/197 (47%), Gaps = 14/197 (7%)
Query: 630 DDYQSSVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESN-DKIVLISNYTQTLDLIEK 688
D Q R ++S+I FS+K S + + KIK E+ +KI++ S + L I +
Sbjct: 1083 DSPQLYYSVRPGAHKSIIGD-FSTKISSVVELVLKIKGENEQEKIIVFSQWQAILIEIAR 1141
Query: 689 MCFSNHYGVLRLDGTMNINK-RQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLIL 747
L L+G NK K D F +P L+ G G+NLI A + L
Sbjct: 1142 --------ALSLNGIQFRNKCTNKDFDDFKNPLSNVTCLLMPLSKGSKGLNLIEATHVFL 1193
Query: 748 LDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKE 807
++P NP ++QA+ R+ R GQK+ ++RFI TIEE I + + + +
Sbjct: 1194 VEPILNPGDERQAIGRIHRFGQKRPTKVHRFIVNETIEENIL--SLITSADDTTTLSTHW 1251
Query: 808 DVERLFSSDNLKQLFKL 824
D+E + + D+LK+LF L
Sbjct: 1252 DLENM-TLDSLKKLFIL 1267
>Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 220
Score = 70.9 bits (172), Expect = 9e-12
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 327 GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSID-KCIIVCPSSLVNNWANEIDKWLGP 385
GCI+ DEMGLGKT Q +AL + GR + + +I+CP +
Sbjct: 28 GCILGDEMGLGKTCQTIALFIYLA-----GRLNDEGPFLILCPYVCFEQLERRNAEICSR 82
Query: 386 GSLSSLAIDGK-KSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLRRNVEQLKNCEV 444
L ++ D + ++ L +S H VL+ +Y+ ++ LK+
Sbjct: 83 SFLCNICSDKEERACLQQDLKQESRFH------------VLLTTYEICLKDASFLKSFPW 130
Query: 445 GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGL 500
+++ DE HRLKN SL L ++L+GTPIQN L E ++LL+F P L
Sbjct: 131 SVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDL 186
>At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 675
Score = 69.3 bits (168), Expect = 2e-11
Identities = 84/386 (21%), Positives = 157/386 (39%), Gaps = 54/386 (13%)
Query: 426 IISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSI--RCPRRVILSGTPIQ 483
I+SYD + + + L + +++ADE H LKN + +A + + ++LSGTP
Sbjct: 301 IVSYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPAL 360
Query: 484 NDLSEYFALLNFSNPGLLGSRNDFRKNF----------ELPILQSRDSLATDEEVTLGKD 533
+ E F L P + + +++ + +LP + T + G
Sbjct: 361 SRPIELFKQLEALYPDVYRNIHEYGGRYCKGVSPLHIEKLPRSSYKGFFGTYQ----GAS 416
Query: 534 RLRQLSNIVSKFI-IRRTNNILAKYLPCKYEHVIFINLTPFQ-QSLYQHFIESRAVKKIV 591
+L N++ + IRR + LP K +F++L + + F E + VK +
Sbjct: 417 NHDELHNLMKATVMIRRLKKDVLTELPSKRRQQVFLDLAAKDMKQINALFHELKVVKSKI 476
Query: 592 KGD-SNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQSSVDSRTSRNRSVIQTA 650
K S +K++ ++K LI Y S
Sbjct: 477 KDCISEDDIKSLKFIEK------------------NLINKIYTDSA-------------- 504
Query: 651 FSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQ 710
+K + +L + E+ K ++ +++ L+ + + G +R+DG+ + RQ
Sbjct: 505 -VAKIPAVLDYLENV-IEAGCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQ 562
Query: 711 KLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQK 770
LV F D + + +LS +A G GI L A+ +I + W P QA R R GQ
Sbjct: 563 ALVSDFQDKDEIKAA-VLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQV 621
Query: 771 KDCFIYRFISTGTIEEKIFQRQSMKM 796
I+ ++ T+++ I+ K+
Sbjct: 622 SSVNIHYLLANDTVDDIIWDVVQSKL 647
>SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 104
Score = 67.0 bits (162), Expect = 1e-10
Identities = 33/99 (33%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 725 IFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTI 784
+ ++S KAGG G+NL AN + ++DP W+ + + QA+ R+ R GQ+K F+ R+I T+
Sbjct: 6 VLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTV 65
Query: 785 EEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFK 823
EE++ + Q K ++ + E +++ S +++K LF+
Sbjct: 66 EERMLKIQERKNFITG-TLGMSEGKQQVQSIEDIKMLFE 103
>YLR247c [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1556
Score = 61.6 bits (148), Expect = 5e-09
Identities = 54/208 (25%), Positives = 96/208 (45%), Gaps = 23/208 (11%)
Query: 647 IQTAFSSKFSVLARFLYKIKTESNDK------IVLISNYTQTLDLIEKMCFSNHYGVLR- 699
I+ +F +K + + + ++ +S + ++L S T+ L +I K+ H L
Sbjct: 1350 IKESFGAKIDFVIKLISYLRLKSEQENADPPQVILYSQKTEYLKVIGKVLKLYHIEHLAC 1409
Query: 700 LDGTMNINKRQKLVDRFNDPEGQEFI--FLLSSKAGGCGINLIGANRLILLDPDWNPAAD 757
L T N+ + N+ + Q + LL+ K G G+NLI A + LLDP N + +
Sbjct: 1410 LSNTANVG------ETINNFKRQPSVTCLLLNVKTLGAGLNLINAKHIFLLDPILNNSDE 1463
Query: 758 QQALARVWRDGQKKDCFIYRFISTGTIEEKIF-------QRQSMKMSLSSCVVDEKEDVE 810
QA+ R R GQ ++ F++ F+ T+EE I +R+ + S DE +D
Sbjct: 1464 LQAMGRNNRIGQDEETFVWNFMIRNTVEENILRYKCILEERKRKEKSKKGDKYDEAQDET 1523
Query: 811 RLFSSDNLKQLFKLDTKTICDTHETYNC 838
SD+ K + + + + H +NC
Sbjct: 1524 DNEESDDAKFEISVVDQEVSNEH-LWNC 1550
>SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1375
Score = 61.6 bits (148), Expect = 5e-09
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 16/217 (7%)
Query: 580 HFIESRAVKKIVKGDSNQPLKAIGLLKKLCNHPDLLELSEDIPGSEELIP-----DDYQS 634
H S ++ +K S+ P+ L K N+ + S DI +E + D+
Sbjct: 1109 HLYCSFCLEAWLKHSSSCPMCKTKLNK---NNAYYIGESRDIYSRQEFVTGFNKRDERLE 1165
Query: 635 SVDSRTSRNRS--VIQTAFSSKFSVLARFLYKIK-TESNDKIVLISNYTQTLDLIEKMCF 691
+D R S ++ +F SK +++ L +K E K+V+ S + LD++ K
Sbjct: 1166 ILDDEAYRQISNMELKESFGSKIDTISKHLLYLKHNELYPKVVVFSQWLDVLDVLHKSFE 1225
Query: 692 SNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPD 751
+N +R DG + + RF + + + L +++ G+ L A + + +P
Sbjct: 1226 ANGIVFIRFDG----KSKNTCLKRFKEERSLQ-VLTLHARSQSSGLTLTNATHVFMCEPL 1280
Query: 752 WNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKI 788
N + QA++RV R GQ + F+Y +I T+E I
Sbjct: 1281 LNSGIEMQAISRVHRIGQTRPTFVYYYIVEDTVEGHI 1317
>Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1669
Score = 56.2 bits (134), Expect = 2e-07
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 643 NRSVIQTAFSSKFSVLARFLYKIKTE-SNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLD 701
+RS I+ A + + Y +E +N + + + LD+I K N+ ++
Sbjct: 1510 HRSSIKCAICRQTTSHKEISYVFTSEKANQEEDIPVKWQDVLDIISKALTDNNMEFAQIS 1569
Query: 702 GTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQAL 761
+ R DP Q I LL G G+ +I A ++L++P NPA + QA+
Sbjct: 1570 RVKTFQENLSAFKR--DP--QINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAI 1625
Query: 762 ARVWRDGQKKDCFIYRFISTGTIEEKI 788
RV R GQ K ++RF+ TIEE++
Sbjct: 1626 GRVHRIGQTKPTIVHRFLIKATIEERM 1652
>Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 293
Score = 52.4 bits (124), Expect = 3e-06
Identities = 35/162 (21%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
Query: 648 QTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNIN 707
QTA + K + ++ + + K ++ +++ L + N +R+DG+++ +
Sbjct: 65 QTAIA-KAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSS 123
Query: 708 KRQKLVDRFN-DPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWR 766
+R LV++F DP+ + + +LS +A G G+ A+ ++ + W+P +QA R R
Sbjct: 124 ERIHLVNQFQKDPDTR--VAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHR 181
Query: 767 DGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKED 808
GQ I+ I+ GT++ ++ + K ++ ++ +++
Sbjct: 182 IGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKE 223
>7293730 [R] KOG0383 Predicted helicase
Length = 884
Score = 52.0 bits (123), Expect = 4e-06
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 329 IMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGP--- 385
I+ADEMGLGKT+Q + ++++ K+G ++ P S + NW E + W
Sbjct: 743 ILADEMGLGKTIQTVTFLYSLYKEG----HCRGPFLVAVPLSTLVNWEREFELWAPDFYC 798
Query: 386 ----GSLSSLA-IDGKKSSLNNGNVADS-VSHWASAQGRNIVKPVLIISYDTLRRNVEQL 439
G S A I + S G + S VS + Q + VL+ SY+ + + L
Sbjct: 799 ITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYK---FNVLLTSYELISMDAACL 855
Query: 440 KNCEVGLMLADEGHRLKNADS 460
+ + +++ DE HRLK+ S
Sbjct: 856 GSIDWAVLVVDEAHRLKSNQS 876
>CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 689
Score = 51.6 bits (122), Expect = 5e-06
Identities = 33/127 (25%), Positives = 60/127 (46%), Gaps = 1/127 (0%)
Query: 672 KIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSK 731
K+++ +++ LD I+ G +R+DG ++R L D F + + +LS
Sbjct: 494 KVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNIR-VAVLSIT 552
Query: 732 AGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQR 791
A G GI L A+ ++ + +NP QA R R GQK F+ I+ T ++ ++
Sbjct: 553 AAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNM 612
Query: 792 QSMKMSL 798
K+ +
Sbjct: 613 VQQKLDV 619
>CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 687
Score = 51.6 bits (122), Expect = 5e-06
Identities = 33/127 (25%), Positives = 60/127 (46%), Gaps = 1/127 (0%)
Query: 672 KIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSK 731
K+++ +++ LD I+ G +R+DG ++R L D F + + +LS
Sbjct: 492 KVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNIR-VAVLSIT 550
Query: 732 AGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQR 791
A G GI L A+ ++ + +NP QA R R GQK F+ I+ T ++ ++
Sbjct: 551 AAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNM 610
Query: 792 QSMKMSL 798
K+ +
Sbjct: 611 VQQKLDV 617
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,393,894
Number of Sequences: 60738
Number of extensions: 2403901
Number of successful extensions: 8530
Number of sequences better than 1.0e-05: 155
Number of HSP's better than 0.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 7643
Number of HSP's gapped (non-prelim): 374
length of query: 895
length of database: 30,389,216
effective HSP length: 115
effective length of query: 780
effective length of database: 23,404,346
effective search space: 18255389880
effective search space used: 18255389880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)