ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI0952 good T KOG3348 Signal transduction mechanisms BolA (bacterial stress-induced morphogen)-related protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactI0952  323657 323385 -91  
         (91 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YAL046c [T] KOG3348 BolA (bacterial stress-induced morphogen)-re...   119   7e-28
SPCC4B3.11c [T] KOG3348 BolA (bacterial stress-induced morphogen...    84   3e-17
CE25173 [T] KOG3348 BolA (bacterial stress-induced morphogen)-re...    60   4e-10
At5g09830 [T] KOG3348 BolA (bacterial stress-induced morphogen)-...    60   7e-10
7303423 [T] KOG3348 BolA (bacterial stress-induced morphogen)-re...    56   8e-09
SPAC8C9.11 [T] KOG3348 BolA (bacterial stress-induced morphogen)...    52   2e-07

>YAL046c [T] KOG3348 BolA (bacterial stress-induced morphogen)-related
           protein
          Length = 118

 Score =  119 bits (298), Expect = 7e-28
 Identities = 54/76 (71%), Positives = 64/76 (84%)

Query: 15  SLTPEEKLITDKLSKELNPSSISVNDISGGCGSMFSINITSDKFKGLSIVKQHKLVNEIL 74
           ++TPEEK+ITDKL +EL P    V D+SGGCGSMF+INITS KF GLS++KQH+LVN IL
Sbjct: 34  AMTPEEKMITDKLQQELEPEVCKVQDVSGGCGSMFAINITSKKFNGLSLIKQHQLVNRIL 93

Query: 75  KDDIKRWHGLQLRTKK 90
           +DDI RWHGLQL TKK
Sbjct: 94  RDDISRWHGLQLTTKK 109


>SPCC4B3.11c [T] KOG3348 BolA (bacterial stress-induced morphogen)-related
           protein
          Length = 116

 Score = 84.0 bits (206), Expect = 3e-17
 Identities = 41/81 (50%), Positives = 59/81 (72%), Gaps = 1/81 (1%)

Query: 11  RRLYSLTPEEKLITDKLSKELNPSSISVNDISGGCGSMFSINITSDKFKGLSIVKQHKLV 70
           +R YS TP E+ I D L+++L+PSS+ V D+SGGCGSM+ + I S  F+G + + QH+LV
Sbjct: 25  KRFYS-TPGERRIKDILTEKLSPSSLRVIDVSGGCGSMYQVAIKSKAFQGKNTLAQHRLV 83

Query: 71  NEILKDDIKRWHGLQLRTKKE 91
           N ILK++I+  HGL L T+ E
Sbjct: 84  NSILKEEIRNMHGLNLSTEVE 104


>CE25173 [T] KOG3348 BolA (bacterial stress-induced morphogen)-related
           protein
          Length = 106

 Score = 60.5 bits (145), Expect = 4e-10
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 3/69 (4%)

Query: 21  KLITDKLSKELNPSSISVNDISGGCGSMFSINITSDKFKGLSIVKQHKLVNEILKDDIKR 80
           KL+T+ +      + + V+D+S GCGSMF + + +  FKG S V QHK V  IL++ IK 
Sbjct: 39  KLLTEGID---GCTRVEVHDVSNGCGSMFDVVVEAAGFKGKSKVAQHKQVTSILREQIKD 95

Query: 81  WHGLQLRTK 89
            HGL ++TK
Sbjct: 96  MHGLTIKTK 104


>At5g09830 [T] KOG3348 BolA (bacterial stress-induced morphogen)-related
          protein
          Length = 93

 Score = 59.7 bits (143), Expect = 7e-10
 Identities = 23/61 (37%), Positives = 43/61 (69%)

Query: 27 LSKELNPSSISVNDISGGCGSMFSINITSDKFKGLSIVKQHKLVNEILKDDIKRWHGLQL 86
          L+ +L P  + V DISGGCGS F + + S++F+G  ++++H++VN  L++++K  H L +
Sbjct: 11 LTSKLKPIHLEVIDISGGCGSSFEVEVVSEQFEGKRLLERHRMVNAALEEEMKEIHALSI 70

Query: 87 R 87
          +
Sbjct: 71 K 71


>7303423 [T] KOG3348 BolA (bacterial stress-induced morphogen)-related
          protein
          Length = 86

 Score = 56.2 bits (134), Expect = 8e-09
 Identities = 25/70 (35%), Positives = 41/70 (57%)

Query: 19 EEKLITDKLSKELNPSSISVNDISGGCGSMFSINITSDKFKGLSIVKQHKLVNEILKDDI 78
          + K + +KL +EL    +SV D S GCG  FS  I S  F G +++++H+LVN  L +++
Sbjct: 5  DSKYLEEKLKRELQTEYVSVTDESDGCGGKFSAVIVSPAFSGKTLLQKHRLVNSTLAEEL 64

Query: 79 KRWHGLQLRT 88
          K  H    ++
Sbjct: 65 KEIHAFSQKS 74


>SPAC8C9.11 [T] KOG3348 BolA (bacterial stress-induced morphogen)-related
          protein
          Length = 80

 Score = 51.6 bits (122), Expect = 2e-07
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 27 LSKELNPSSISVNDISGGCGSMFSINITSDKFKGLSIVKQHKLVNEILKDDIKRWHGL-Q 85
          +   L P+ I + D+SGGCG  F + I S  F+G S + +H+LVN  L++ IK  H   Q
Sbjct: 11 IQNTLEPTHIEIQDMSGGCGQNFEVIIVSPLFEGKSTLARHRLVNHKLQEVIKDIHAFTQ 70

Query: 86 LRT 88
          +RT
Sbjct: 71 VRT 73


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.316    0.135    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,275,757
Number of Sequences: 60738
Number of extensions: 185913
Number of successful extensions: 625
Number of sequences better than 1.0e-05: 6
Number of HSP's better than  0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 619
Number of HSP's gapped (non-prelim): 6
length of query: 91
length of database: 30,389,216
effective HSP length: 67
effective length of query: 24
effective length of database: 26,319,770
effective search space: 631674480
effective search space used: 631674480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)