ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI0985 good K KOG1657 Transcription CCAAT-binding factor, subunit C (HAP5)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI0985 334535 334068 -156
(156 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR358w [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 234 4e-62
At1g54830 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 139 2e-33
At1g56170 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 139 2e-33
At3g48590 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 138 3e-33
At5g63470 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 138 3e-33
At1g08970 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 137 4e-33
SPBC3B8.02 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 130 5e-31
Hs11496978 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 125 2e-29
7290758 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 122 1e-28
At5g50480 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 119 2e-27
ECU05g0450 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 101 5e-22
At5g27910 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 100 1e-21
CE27996 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 96 3e-20
At5g50490 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 90 1e-18
At5g50470 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 86 2e-17
At5g38140 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 77 7e-15
Hs9845281 [L] KOG1658 DNA polymerase epsilon subunit C 66 2e-11
7291416 [L] KOG1658 DNA polymerase epsilon subunit C 64 8e-11
Hs8393116 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 62 3e-10
CE22389 [L] KOG1658 DNA polymerase epsilon subunit C 61 5e-10
Hs18426973 [K] KOG1659 Class 2 transcription repressor NC2 alpha... 59 3e-09
SPAC17G8.03c [K] KOG1659 Class 2 transcription repressor NC2 alp... 53 1e-07
At3g12480 [K] KOG1659 Class 2 transcription repressor NC2 alpha ... 53 2e-07
YER159c [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 49 4e-06
At5g43250 [K] KOG1657 CCAAT-binding factor subunit C (HAP5) 48 6e-06
>YOR358w [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 242
Score = 234 bits (597), Expect = 4e-62
Identities = 112/131 (85%), Positives = 122/131 (92%)
Query: 23 EEDEEIDVFHNVGQGLAGRYREIMIQYWQELINEIESTNEPGSQFQDDFKSHSLPLARIK 82
E+DEE DVF NVGQGL G Y+EIMI+YWQELINEIESTNEPGS+ QDDFKSHSLP ARI+
Sbjct: 107 EDDEEYDVFRNVGQGLVGHYKEIMIRYWQELINEIESTNEPGSEHQDDFKSHSLPFARIR 166
Query: 83 KVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRTLQKQDIADALQKSD 142
KVMKTDE+V+MIS EAPI+FAKACEIFITELTMRAWCVAE NKRRTLQK DIA+ALQKSD
Sbjct: 167 KVMKTDEDVKMISAEAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADIAEALQKSD 226
Query: 143 MFDFLIDIVPR 153
MFDFLID+VPR
Sbjct: 227 MFDFLIDVVPR 237
>At1g54830 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 217
Score = 139 bits (350), Expect = 2e-33
Identities = 68/123 (55%), Positives = 89/123 (72%), Gaps = 8/123 (6%)
Query: 31 FHNVGQGLAGRYREIMIQYWQELINEIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEE 90
+H + Q + + + +W+ EIE T DFK+HSLPLARIKK+MK DE+
Sbjct: 34 YHQIHQQQQQQLTQQLQSFWETQFKEIEKTT--------DFKNHSLPLARIKKIMKADED 85
Query: 91 VRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRTLQKQDIADALQKSDMFDFLIDI 150
VRMIS EAP++FA+ACE+FI ELT+R+W EENKRRTLQK DIA A+ ++D+FDFL+DI
Sbjct: 86 VRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDI 145
Query: 151 VPR 153
VPR
Sbjct: 146 VPR 148
>At1g56170 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 199
Score = 139 bits (349), Expect = 2e-33
Identities = 66/106 (62%), Positives = 83/106 (78%), Gaps = 8/106 (7%)
Query: 49 YWQELINEIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEI 108
+W + EIE T DFK+H+LPLARIKK+MK DE+VRMIS EAP++FAKACE+
Sbjct: 58 FWANQMQEIEHTT--------DFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEM 109
Query: 109 FITELTMRAWCVAEENKRRTLQKQDIADALQKSDMFDFLIDIVPRN 154
FI ELT+RAW EENKRRTLQK DIA A+ ++D+FDFL+DI+PR+
Sbjct: 110 FILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRD 155
>At3g48590 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 234
Score = 138 bits (348), Expect = 3e-33
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 8/106 (7%)
Query: 49 YWQELINEIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEI 108
+W EIE N DFK+H LPLARIKK+MK DE+VRMIS EAPILFAKACE+
Sbjct: 47 FWTYQRQEIEQVN--------DFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACEL 98
Query: 109 FITELTMRAWCVAEENKRRTLQKQDIADALQKSDMFDFLIDIVPRN 154
FI ELT+R+W AEENKRRTLQK DIA A+ ++D+FDFL+DIVPR+
Sbjct: 99 FILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRD 144
>At5g63470 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 250
Score = 138 bits (347), Expect = 3e-33
Identities = 69/105 (65%), Positives = 81/105 (76%), Gaps = 8/105 (7%)
Query: 49 YWQELINEIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEI 108
+W EIE N DFK+H LPLARIKK+MK DE+VRMIS EAPILFAKACE+
Sbjct: 60 FWTYQRQEIEQVN--------DFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACEL 111
Query: 109 FITELTMRAWCVAEENKRRTLQKQDIADALQKSDMFDFLIDIVPR 153
FI ELT+R+W AEENKRRTLQK DIA A+ ++D+FDFL+DIVPR
Sbjct: 112 FILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR 156
>At1g08970 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 231
Score = 137 bits (346), Expect = 4e-33
Identities = 70/124 (56%), Positives = 89/124 (71%), Gaps = 9/124 (7%)
Query: 31 FHNVGQGLAGRYREIMIQ-YWQELINEIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDE 89
FH + Q + +Q +W+ EIE T DFK+HSLPLARIKK+MK DE
Sbjct: 43 FHQIHQQQQQQQLAQQLQAFWENQFKEIEKTT--------DFKNHSLPLARIKKIMKADE 94
Query: 90 EVRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRTLQKQDIADALQKSDMFDFLID 149
+VRMIS EAP++FA+ACE+FI ELT+R+W EENKRRTLQK DIA A+ ++D+FDFL+D
Sbjct: 95 DVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVD 154
Query: 150 IVPR 153
IVPR
Sbjct: 155 IVPR 158
>SPBC3B8.02 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 415
Score = 130 bits (328), Expect = 5e-31
Identities = 74/159 (46%), Positives = 103/159 (64%), Gaps = 20/159 (12%)
Query: 9 QENVTNEQGPLMDLEED-----------EEIDVFHNVGQGLAGRYREIMIQYWQELINEI 57
Q++V+ Q P+ D++ E F NV QGL G + + +YWQ+ I+ +
Sbjct: 38 QDSVSRFQQPVPDVDPTAVNHYNASAPIEVASPFDNVTQGLVGSDAQALAEYWQKTIDTL 97
Query: 58 ESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVR--MISGEAPILFAKACEIFITELTM 115
E ++ K+ LPLARIKKVMKTD++V+ MIS EAP LFAK EIFI ELTM
Sbjct: 98 EHDDQA-------VKTLHLPLARIKKVMKTDDDVKNKMISAEAPFLFAKGSEIFIAELTM 150
Query: 116 RAWCVAEENKRRTLQKQDIADALQKSDMFDFLIDIVPRN 154
RAW A++N+RRTLQ+ DIA+A+ KS+M+DFLIDI+ ++
Sbjct: 151 RAWLHAKKNQRRTLQRSDIANAVSKSEMYDFLIDIISKD 189
>Hs11496978 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 335
Score = 125 bits (315), Expect = 2e-29
Identities = 63/106 (59%), Positives = 78/106 (73%), Gaps = 6/106 (5%)
Query: 49 YWQELINEIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEI 108
+W ++ EI + DF+ LPLARIKK+MK DE+V+MIS EAP+LFAKA +I
Sbjct: 22 FWPRVMEEIRNLTVK------DFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQI 75
Query: 109 FITELTMRAWCVAEENKRRTLQKQDIADALQKSDMFDFLIDIVPRN 154
FITELT+RAW E+NKRRTLQ+ DIA A+ K D FDFLIDIVPR+
Sbjct: 76 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRD 121
>7290758 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 601
Score = 122 bits (307), Expect = 1e-28
Identities = 61/105 (58%), Positives = 74/105 (70%), Gaps = 6/105 (5%)
Query: 49 YWQELINEIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEI 108
+W +++E+ S Q D K LPLARIKK+MK DE +MI+GEAP+LFAKACE
Sbjct: 133 FWPNIVSEVHSIG------QVDAKHQVLPLARIKKIMKLDENAKMIAGEAPLLFAKACEY 186
Query: 109 FITELTMRAWCVAEENKRRTLQKQDIADALQKSDMFDFLIDIVPR 153
FI ELTM AW EE++RRTLQ+ DIA A+ D FDFLIDIVPR
Sbjct: 187 FIQELTMHAWVHTEESRRRTLQRSDIAQAIANYDQFDFLIDIVPR 231
>At5g50480 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 202
Score = 119 bits (297), Expect = 2e-27
Identities = 54/85 (63%), Positives = 70/85 (81%)
Query: 70 DFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRTL 129
DFK+ LPLARIKK+MK D +V M+S EAPI+FAKACE+FI +LTMR+W AEENKR TL
Sbjct: 49 DFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTL 108
Query: 130 QKQDIADALQKSDMFDFLIDIVPRN 154
QK DI++A+ S +DFL+D+VP++
Sbjct: 109 QKSDISNAVASSFTYDFLLDVVPKD 133
>ECU05g0450 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 219
Score = 101 bits (251), Expect = 5e-22
Identities = 49/83 (59%), Positives = 63/83 (75%)
Query: 72 KSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRTLQK 131
K +LPLARIK++MK +E VRM++ E P+LF+ E FI ELT+RAW EENKRR LQK
Sbjct: 35 KDLNLPLARIKRLMKIEEGVRMVASEVPVLFSMITEKFIEELTLRAWINTEENKRRILQK 94
Query: 132 QDIADALQKSDMFDFLIDIVPRN 154
D+ A++ S+MFDFL+ IVPRN
Sbjct: 95 SDLTAAVKTSEMFDFLVYIVPRN 117
>At5g27910 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 187
Score = 100 bits (248), Expect = 1e-21
Identities = 46/80 (57%), Positives = 64/80 (79%)
Query: 70 DFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRTL 129
DFK+H LP+ RIKK+MK D +V MI+ EAPIL +KACE+FI +LTMR+W A+E+KR TL
Sbjct: 31 DFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTL 90
Query: 130 QKQDIADALQKSDMFDFLID 149
QK ++ A+ ++ +FDFL+D
Sbjct: 91 QKSNVDAAVAQTVIFDFLLD 110
>CE27996 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 232
Score = 95.5 bits (236), Expect = 3e-20
Identities = 49/112 (43%), Positives = 72/112 (63%), Gaps = 4/112 (3%)
Query: 43 REIMIQYWQELINEIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVR--MISGEAPI 100
R++ +W+E ++ +E + K+ S+P+AR+KK+M+ D++VR MI+ +API
Sbjct: 79 RQMTEDFWREKKQKMTEISE--EDMLNKSKNMSVPMARVKKIMRIDDDVRNFMIASDAPI 136
Query: 101 LFAKACEIFITELTMRAWCVAEENKRRTLQKQDIADALQKSDMFDFLIDIVP 152
A+A E FI E+T W E +RR LQK DIA A+QKSD FDFLID +P
Sbjct: 137 FMAQAAEFFIEEMTAMGWQYVSEARRRILQKADIASAVQKSDQFDFLIDFLP 188
>At5g50490 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 186
Score = 90.1 bits (222), Expect = 1e-18
Identities = 41/99 (41%), Positives = 69/99 (69%)
Query: 56 EIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTM 115
+++S G + + K+H P++RIK++MK D +V MI+ EAP L +KACE+F+ +LTM
Sbjct: 17 QLKSFWSKGMEGDLNVKNHEFPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTM 76
Query: 116 RAWCVAEENKRRTLQKQDIADALQKSDMFDFLIDIVPRN 154
R+W A+E+ R T++K D+ + ++ +FDFL D VP++
Sbjct: 77 RSWLHAQESNRLTIRKSDVDAVVSQTVIFDFLRDDVPKD 115
>At5g50470 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 212
Score = 86.3 bits (212), Expect = 2e-17
Identities = 43/91 (47%), Positives = 61/91 (66%), Gaps = 6/91 (6%)
Query: 70 DFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRTL 129
D K H+ PL RIKK+MK++ EV M++ EAP+L +KACE+ I +LTMR+W E R+TL
Sbjct: 58 DVKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLTMRSWLHTVEGGRQTL 117
Query: 130 Q------KQDIADALQKSDMFDFLIDIVPRN 154
+ + DI+ A +S F FL D+VPR+
Sbjct: 118 KRSDTLTRSDISAATTRSFKFTFLGDVVPRD 148
>At5g38140 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 191
Score = 77.4 bits (189), Expect = 7e-15
Identities = 38/83 (45%), Positives = 57/83 (67%), Gaps = 6/83 (7%)
Query: 76 LPLARIKKVMKTDEEVRM------ISGEAPILFAKACEIFITELTMRAWCVAEENKRRTL 129
LPL+R++K++K+D EV++ IS + P LF+KACE FI E+T+RAW + R T+
Sbjct: 58 LPLSRVRKILKSDPEVKIYVNFQKISCDVPALFSKACEYFILEVTLRAWMHTQSCTRETI 117
Query: 130 QKQDIADALQKSDMFDFLIDIVP 152
++ DI A++ S +DFLID VP
Sbjct: 118 RRCDIFQAVKNSGTYDFLIDRVP 140
>Hs9845281 [L] KOG1658 DNA polymerase epsilon subunit C
Length = 117
Score = 66.2 bits (160), Expect = 2e-11
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Query: 60 TNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWC 119
T+ PG++ LPLAR+K ++K D +V + EA + A+A E+F+ + A+C
Sbjct: 31 TSVPGARLS------RLPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYC 84
Query: 120 VAEENKRRTLQKQDIADALQKSDMFDFL 147
A++ KR+TLQ++D+ +A++ D F FL
Sbjct: 85 CAQQGKRKTLQRRDLDNAIEAVDEFAFL 112
>7291416 [L] KOG1658 DNA polymerase epsilon subunit C
Length = 155
Score = 63.9 bits (154), Expect = 8e-11
Identities = 33/96 (34%), Positives = 55/96 (56%)
Query: 52 ELINEIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFIT 111
E + E TN + ++ K LPLARI+ +MK D ++ M + EA + AKA E+FI
Sbjct: 54 EQLTEKPVTNGNKAPADNEAKMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKAVELFIA 113
Query: 112 ELTMRAWCVAEENKRRTLQKQDIADALQKSDMFDFL 147
L+ ++ ++K++T+QK+D+ A+ D FL
Sbjct: 114 SLSRESYTYTAQSKKKTIQKRDVDMAISAVDSLLFL 149
>Hs8393116 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 131
Score = 62.0 bits (149), Expect = 3e-10
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 75 SLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRTLQKQDI 134
SLPL+RI+ +MK+ EV I+ EA +L AKA E+F+ L ++ +++ L D+
Sbjct: 18 SLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTYSDL 77
Query: 135 ADALQKSDMFDFLIDIVPRNV 155
A+ Q+S+ F FL DI+P+ +
Sbjct: 78 ANTAQQSETFQFLADILPKKI 98
>CE22389 [L] KOG1658 DNA polymerase epsilon subunit C
Length = 179
Score = 61.2 bits (147), Expect = 5e-10
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 48 QYWQELINEIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACE 107
Q +E + EIE + ++ LPL R+KKV++ + +V M++ EA L AKA E
Sbjct: 15 QMSEEDVREIE-------EHVEELVRSQLPLGRVKKVVRMNPDVEMLNNEALQLMAKAAE 67
Query: 108 IFITELTMRAWCVAEENKRRTLQKQDIADALQKSDMFDFLID 149
+FI EL+ A A KR+T+Q +DI A++K+ F FL D
Sbjct: 68 LFIKELSNAANQNAALEKRKTVQTKDIDKAIKKTWAFAFLED 109
>Hs18426973 [K] KOG1659 Class 2 transcription repressor NC2 alpha subunit
(DRAP1)
Length = 205
Score = 58.5 bits (140), Expect = 3e-09
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 77 PLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRTLQKQDIAD 136
P ARIKK+M+TDEE+ ++ P++ ++A E+F+ L +A V + +T+ +
Sbjct: 13 PPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQ 72
Query: 137 ALQKSDMFDFLIDIV 151
++ FDFL D+V
Sbjct: 73 CIELEQQFDFLKDLV 87
>SPAC17G8.03c [K] KOG1659 Class 2 transcription repressor NC2 alpha subunit
(DRAP1)
Length = 199
Score = 53.1 bits (126), Expect = 1e-07
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 55 NEIESTNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELT 114
N+ E+ P + ++ F P+ARIKK+M+ D++V ++ P++ +KA E+F+ +
Sbjct: 8 NDSETKPNPATYWKSRF-----PVARIKKIMQADQDVGKVAQVTPVIMSKALELFMQSII 62
Query: 115 MRAWCVAEENKRRTLQKQDIADALQKSDMFDFLIDIVPR 153
+ ++ + + + A+Q + FDFL DIV +
Sbjct: 63 QESCKQTRLHQAKRVTVSHLKHAVQSVEQFDFLQDIVEK 101
>At3g12480 [K] KOG1659 Class 2 transcription repressor NC2 alpha subunit
(DRAP1)
Length = 297
Score = 52.8 bits (125), Expect = 2e-07
Identities = 24/75 (32%), Positives = 47/75 (62%)
Query: 79 ARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRTLQKQDIADAL 138
ARIKK+M+ DE+V I+ P+L +K+ E+F+ +L R + + E +T+ + +
Sbjct: 16 ARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLKHCV 75
Query: 139 QKSDMFDFLIDIVPR 153
++ ++FDFL ++V +
Sbjct: 76 ERYNVFDFLREVVSK 90
>YER159c [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 142
Score = 48.5 bits (114), Expect = 4e-06
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 59 STNEPGSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAW 118
+ NE G F D K+H P A++KK+M+TDE++ +S P++ ++ E FI L ++
Sbjct: 38 NNNELGDVF-DRIKTH-FPPAKVKKIMQTDEDIGKVSQATPVIAGRSLEFFIALLVKKSG 95
Query: 119 CVAEENKRRTLQKQDIADALQKSDMFDFL 147
+A + + + + + + FDFL
Sbjct: 96 EMARGQGTKRITAEILKKTILNDEKFDFL 124
>At5g43250 [K] KOG1657 CCAAT-binding factor subunit C (HAP5)
Length = 130
Score = 47.8 bits (112), Expect = 6e-06
Identities = 25/81 (30%), Positives = 46/81 (55%), Gaps = 1/81 (1%)
Query: 77 PLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRTLQKQDIAD 136
P+ R+KK+MK D+++ I+ EA + + E+F+ L ++ V E KR+T+ +
Sbjct: 13 PIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTAEKKRKTVNLDHLRI 72
Query: 137 ALQK-SDMFDFLIDIVPRNVQ 156
A+++ DFL+D +P Q
Sbjct: 73 AVKRHQPTSDFLLDSLPLPAQ 93
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,348,023
Number of Sequences: 60738
Number of extensions: 374869
Number of successful extensions: 1163
Number of sequences better than 1.0e-05: 25
Number of HSP's better than 0.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1134
Number of HSP's gapped (non-prelim): 25
length of query: 156
length of database: 30,389,216
effective HSP length: 97
effective length of query: 59
effective length of database: 24,497,630
effective search space: 1445360170
effective search space used: 1445360170
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)