ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI1014 suspect: %id L KOG1121 Replication, recombination and repair Tam3-transposase (Ac family)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI1014 342806 341217 -530
(530 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
At4g05510 [L] KOG1121 Tam3-transposase (Ac family) 70 8e-12
At1g42110 [L] KOG1121 Tam3-transposase (Ac family) 69 1e-11
At3g23085 [L] KOG1121 Tam3-transposase (Ac family) 54 8e-07
>At4g05510 [L] KOG1121 Tam3-transposase (Ac family)
Length = 604
Score = 70.1 bits (170), Expect = 8e-12
Identities = 117/469 (24%), Positives = 182/469 (37%), Gaps = 101/469 (21%)
Query: 29 ILDFIDLSCKRHTSENLKNALLSCLSEYSISHKVSSITLDNGSNNISMLDGIDKALDLGF 88
IL F D+ HT + L + + CL E+ I KV ++TLDN + N SM + + L L
Sbjct: 201 ILSFSDM-LPPHTGDALASKIHECLKEWGIEKKVFTLTLDNATANNSMQEVLIDRLKLDN 259
Query: 89 DLNGVRSISRIRCMNHVLNRVFLDLLNAFEKGHESLLSRIDKLASYTKSNVYIRNKIRSY 148
+L +RC HVLNR+ + L+ LS+I + Y K + R +
Sbjct: 260 NLMCKGEFFHVRCCAHVLNRIVQNGLDVI----SDALSKIRETVKYVKGSTSRRLALAE- 314
Query: 149 IPCTIPKHNI-------TRFLSRYRQLEVFLKVSKGAKEFFFDNRFKPEFQLIPDDCSVF 201
C K + TR+ S Y L LK + NRFK I D
Sbjct: 315 --CVEGKGEVLLSLDVQTRWNSTYLMLHKALKYQRAL------NRFK-----IVDKNYKN 361
Query: 202 CYQEEELEYILFFVRIARIFQEVTMLLQDDTTNSLCNGIKYYMTIRQYYKSCEELKNGSD 261
C EE + I F ++T L+ + Y T Y+
Sbjct: 362 CPSSEEWKRAKTIHEILMPFYKITNLMSG----------RSYSTSNLYFG---------- 401
Query: 262 DILHVANVGIKKTHLPSNTIKEQVFSAVMASYPKFEKYMDFAFKEPGYWVA--HISQPHR 319
HV + ++ KF+KY +KE +A + P
Sbjct: 402 ---HVWKI-----------------QCLLEMRLKFDKY----WKEYSVILAMRAVLDPRM 437
Query: 320 KTDLLNRSFEQ------SFKEDVIES-ATSYVVSYCKRFTETSDIRSHNKPTEPLNINRV 372
K LL R +++ K D +E+ T Y K F T P + +++ V
Sbjct: 438 KFKLLKRCYDELDPTTSQEKIDFLETKITELFGEYRKAFPVT--------PVDLFDLDDV 489
Query: 373 KKPKLLKNLSAYLDRNISEFHFAPKDEWQIYLGEPLEKEKDFLSYWLENQSRFPALCSLA 432
P++ + SA LD + + PK E + + + L YW EN+ RF AL +A
Sbjct: 490 --PEVEEGKSA-LDMYLED----PKLEMKNH------PNLNVLQYWKENRLRFGALAYMA 536
Query: 433 LAFYHTKLSTADVERSFSISKRVLDD-RFSLASSNLKSTMIVRNRLMCF 480
+ +++ E SFSI VL+ R L +N+++ + R+ L F
Sbjct: 537 MDVLSIPITSVASESSFSIGSHVLNKYRSRLLPTNVQALLCTRSWLYGF 585
>At1g42110 [L] KOG1121 Tam3-transposase (Ac family)
Length = 659
Score = 69.3 bits (168), Expect = 1e-11
Identities = 105/467 (22%), Positives = 185/467 (39%), Gaps = 57/467 (12%)
Query: 29 ILDFIDLSCKRHTSENLKNALLSCLSEYSISHKVSSITLDNGSNNISMLDGIDKALDLGF 88
IL F DL H E + + CL E+ + K+ +ITLDN S N SM + L G
Sbjct: 199 ILAFCDLK-PPHNGEEIAKKVYDCLKEWGLEKKILTITLDNASANTSMQTILKHRLQSGN 257
Query: 89 DLNGVRSISRIRCMNHVLNRVFLDLLNAFEKGHESLLSRIDKLASYTKSNVYIRNKIRSY 148
L + +RC H+LN + + A + LL I + + K++ ++ +
Sbjct: 258 GLLCGGNFLHVRCCAHILNLI----VQAGLELASGLLENITESVKFVKASESRKDSFATC 313
Query: 149 IPCTIPKHNI-------TRFLSRYRQLEVFLKVSKGAKEFFFDNRFKPEFQLIPDDCSVF 201
+ C K TR+ S Y E+ + K K F N ++ + +P
Sbjct: 314 LECVGIKSGAGLSLDVSTRWNSTY---EMLARALKFRKAFAILNLYERGYCSLP------ 364
Query: 202 CYQEEELEYILFFVRIARIFQEVTML---LQDDTTNSLCNGIKYYMTIRQYYKSCEELKN 258
EEE + + + F +T ++ T N + + Y +C+++
Sbjct: 365 --TEEECDRGEKICDLLKPFNTITTYFSGVKYPTANIYFIQVWKIELLLMKYANCDDV-- 420
Query: 259 GSDDILHVANVGIKKTHLPSNTIKEQVFSAVMASYPKFEKYMDFAFKEPGYWVAHISQPH 318
D+ +A KK N +S ++A + + Y
Sbjct: 421 ---DVREMAKKMQKKFAKYWNE-----YSVILAMGAALDPRLKLQILRSAYNKVDPVTAE 472
Query: 319 RKTDLLNRSFEQSFKEDVIESATSYVVSYCKRFTETSDIRSHNKPTEPLNINRVKKPKLL 378
K D++ + ++E +SA+S S+ + P E LN + ++ +
Sbjct: 473 GKVDIVRNNLILLYEEYKTKSASS------------SNSSTTLTPHELLNESPLEAD--V 518
Query: 379 KNLSAYLDRNISEFHFAPKDEWQIYL-GEPLEKEKDF-----LSYWLENQSRFPALCSLA 432
+ L+ ++ + K +IYL EP + K F LS+W ENQ R+ L S+A
Sbjct: 519 NDDLFELESSLISASKSTKSTLEIYLDDEPRLEMKTFSDMEILSFWKENQHRYGDLASMA 578
Query: 433 LAFYHTKLSTADVERSFSISKRVLDD-RFSLASSNLKSTMIVRNRLM 478
++T E +FS+ RVL+ R L N+++ + RN L+
Sbjct: 579 SDLLSIPITTVASESAFSVGGRVLNPFRNRLLPQNVQALICTRNWLL 625
>At3g23085 [L] KOG1121 Tam3-transposase (Ac family)
Length = 463
Score = 53.5 bits (127), Expect = 8e-07
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 29 ILDFIDLSCKRHTSENLKNALLSCLSEYSISHKVSSITLDNGSNNISMLDGIDKALDL-- 86
IL F D+ HT E L N +LSCL E+ + K+ S+TLDN NN SM + L +
Sbjct: 227 ILAFCDMK-PPHTGEELANKILSCLKEWGLEKKIFSLTLDNARNNDSMQSILKHRLQMIS 285
Query: 87 GFDLNGVRSISRIRCMNHVLNRV 109
G L +RC HVLN +
Sbjct: 286 GNGLLCDGKFFHVRCCAHVLNLI 308
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,363,431
Number of Sequences: 60738
Number of extensions: 1403928
Number of successful extensions: 3657
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3655
Number of HSP's gapped (non-prelim): 5
length of query: 530
length of database: 30,389,216
effective HSP length: 111
effective length of query: 419
effective length of database: 23,647,298
effective search space: 9908217862
effective search space used: 9908217862
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)