ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI1222 good R KOG2321 General function prediction only WD40 repeat protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI1222 419415 417316 -700
(700 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR145w [R] KOG2321 WD40 repeat protein 990 0.0
SPCC330.09 [R] KOG2321 WD40 repeat protein 537 e-152
Hs13430872 [R] KOG2321 WD40 repeat protein 378 e-104
At3g56990 [R] KOG2321 WD40 repeat protein 373 e-103
7298152 [R] KOG2321 WD40 repeat protein 359 7e-99
CE04474 [R] KOG2321 WD40 repeat protein 329 8e-90
ECU08g0310 [R] KOG2321 WD40 repeat protein 125 2e-28
>YGR145w [R] KOG2321 WD40 repeat protein
Length = 707
Score = 990 bits (2560), Expect = 0.0
Identities = 496/707 (70%), Positives = 566/707 (79%), Gaps = 7/707 (0%)
Query: 1 MVLKSTSASEISVYQVSGTNVARSLPDWIAKKRKRSLKNDLEYQNRVELIQDFEFSEASN 60
MVLKSTSA+++SVYQVSGTNV+RSLPDWIAKKRKR LKNDLEYQNRVELIQDFEFSEASN
Sbjct: 1 MVLKSTSANDVSVYQVSGTNVSRSLPDWIAKKRKRQLKNDLEYQNRVELIQDFEFSEASN 60
Query: 61 KIKVTPDGNYVMATGTYKPQIHVYDFSNLSLKFERHTDAENIDFCILSEDWTKSVHLQND 120
KIKV+ DG Y MATGTYKPQIHVYDF+NLSLKF+RHTDAEN+DF ILS+DWTKSVHLQND
Sbjct: 61 KIKVSRDGQYCMATGTYKPQIHVYDFANLSLKFDRHTDAENVDFTILSDDWTKSVHLQND 120
Query: 121 RTIQFQNKGGIHYTTRIPKFGRSLAYNKVNCDLYVGASSNELYRLNLEQGRFLNPFKLDT 180
R+IQFQNKGG+HYTTRIPKFGRSL YNKVNCDLYVGAS NELYRLNLE+GRFLNPFKLDT
Sbjct: 121 RSIQFQNKGGLHYTTRIPKFGRSLVYNKVNCDLYVGASGNELYRLNLEKGRFLNPFKLDT 180
Query: 181 EGVNHVSINEVNGLLAASMETNVVEFWDPRSRSRVAKLHLENNLDSADFQVTCSSFKNDG 240
EGVNHVSINEVNGLLAA ETNVVEFWDPRSRSRV+KL+LENN+D+ FQVT +SF+NDG
Sbjct: 181 EGVNHVSINEVNGLLAAGTETNVVEFWDPRSRSRVSKLYLENNIDNRPFQVTTTSFRNDG 240
Query: 241 LNFACGTSNGYSYIYDLRTSEPSIVKDQGYGFAVNKIIWLDSVEDSNKILTCDKRIAKIW 300
L FACGTSNGYSYIYDLRTSEPSI+KDQGYGF + KIIWLD+V NKI+TCDKRIAKIW
Sbjct: 241 LTFACGTSNGYSYIYDLRTSEPSIIKDQGYGFDIKKIIWLDNVGTENKIVTCDKRIAKIW 300
Query: 301 NKNDGKAYASMEPSVDINDIEHVPGTGMFFTANEGIPMHTYYIPNLGPAPRWCSFLDSIT 360
++ DGKAYASMEPSVDINDIEHVPGTGMFFTANE IPMHTYYIP+LGP+PRWCSFLDSIT
Sbjct: 301 DRLDGKAYASMEPSVDINDIEHVPGTGMFFTANESIPMHTYYIPSLGPSPRWCSFLDSIT 360
Query: 361 EELEEKPSDSVYSNYRFITKADVKKLNLTHLIGSKVLRAYMHGFFINTELYDKVALIANP 420
EELEEKPSD+VYSNYRFIT+ DVKKLNLTHL+GS+VLRAYMHGFFINTELYDKV+LIANP
Sbjct: 361 EELEEKPSDTVYSNYRFITRDDVKKLNLTHLVGSRVLRAYMHGFFINTELYDKVSLIANP 420
Query: 421 NSYRDXXXXXXXXXXXXXXXXXXXXTGAITTSKVKVNKMLVDKLSEKRGDKVAGKVLEDD 480
++Y+D +GA+ K+KVNK LVDKLS+KRGDKVAGKVL DD
Sbjct: 421 DAYKDEREREIRRRIEKERESRIRSSGAVQKPKIKVNKTLVDKLSQKRGDKVAGKVLTDD 480
Query: 481 RFKEMFEDDAFQVDEDDYDYKQLNPVKSARETSEGAAKRIRALTAAEESDEERIAARDGK 540
RFKEMFED+ FQVDEDDYD+KQLNPVKS +ET EGAAKRIRALTAAEESDEERIA +DG+
Sbjct: 481 RFKEMFEDEEFQVDEDDYDFKQLNPVKSIKETEEGAAKRIRALTAAEESDEERIAMKDGR 540
Query: 541 SNYXXXXXXXXXXXXXXGNGERD--QDMSXXXXXXXXXXXXXXXXXXXXXXXXXXFMNEL 598
+Y ++ +++S FMNE+
Sbjct: 541 GHYDYEDEESDEEESDDETNQKSNKEELSEKDLRKMEKQKALIERRKKEKEQSERFMNEM 600
Query: 599 TVGQIESREQD-AINMTFDKKVKQLNKEIGSSRSKDAIVRKNHRGEAELTF---XXXXXX 654
G S ++D + ++TF ++V +L + +S ++I+R+N RGEAELTF
Sbjct: 601 KAGTSTSTQRDESAHVTFGEQVGELLEVENGKKSNESILRRNQRGEAELTFIPQRKSKKD 660
Query: 655 XXXXXXXFENNSDGDDDDETA-KVDNGRTKPRFDGRRRASKNVFRGM 700
+N+SD + +E K DNGR+KPRF+ RRRASKN FRGM
Sbjct: 661 GNYKSRRHDNSSDEEGIEENGNKKDNGRSKPRFENRRRASKNAFRGM 707
>SPCC330.09 [R] KOG2321 WD40 repeat protein
Length = 634
Score = 537 bits (1383), Expect = e-152
Identities = 272/553 (49%), Positives = 364/553 (65%), Gaps = 38/553 (6%)
Query: 1 MVLKSTSASEISVYQVSGTNVARSLPDWIAKKRKRSLKNDLEYQNRVELIQDFEFSEASN 60
M LK + + + VY VSG V + LP+WI+K R LK D +R+EL+QDFE+ EASN
Sbjct: 1 MSLKVQNPNNVRVYTVSGEGVTQRLPNWISK---RKLKKDYALSHRIELLQDFEYPEASN 57
Query: 61 KIKVTPDGNYVMATGTYKPQIHVYDFSNLSLKFERHTDAENIDFCILSEDWTKSVHLQND 120
+IK T DG Y MATG YKP I V+DF+ +SLKFERHTDAEN+ F ILS+DWTKSVHLQ D
Sbjct: 58 RIKCTRDGKYAMATGVYKPHIKVFDFAEMSLKFERHTDAENVQFEILSDDWTKSVHLQTD 117
Query: 121 RTIQFQNKGGIHYTTRIPKFGRSLAYNKVNCDLYVGASSNELYRLNLEQGRFLNPFKLD- 179
RT+ F ++GGIHY+TRIPK+GR L Y+ NCDLY+ A+ +E+YRLNLEQGRFLNP K++
Sbjct: 118 RTVDFHSQGGIHYSTRIPKYGRDLKYHYPNCDLYLAAAGDEVYRLNLEQGRFLNPLKIES 177
Query: 180 ------TEGVNHVSINEVNGLLAASMETNVVEFWDPRSRSRVAKLHLENNLDSADF---- 229
T GVN + IN ++ LLA + VEFWDPR RSRV L + + + S +
Sbjct: 178 AQIDSPTGGVNVIDINPMHQLLAFGTDAGSVEFWDPRDRSRVGILEIPSTVPSTPYSDNS 237
Query: 230 -QVTCSSFKNDGLNFACGTSNGYSYIYDLRTSEPSIVKDQGYGFAVNKIIWLDSVEDSN- 287
VT ++NDGLN A G S+G + +YDLR+S P + KDQGY + + W+DS D
Sbjct: 238 RSVTALKYRNDGLNVAIGLSDGATLLYDLRSSSPYMSKDQGYSMPIKSLHWMDSALDGTA 297
Query: 288 KILTCDKRIAKIWNKNDGKAYASMEPSVDINDIEHVPGTGMFFTANEGIPMHTYYIPNLG 347
++L+ D +I KIW K+ GK ++S+EP+V++ND+ + GTG+ TANEG PMH +YIP+L
Sbjct: 298 RVLSADSKIIKIWEKDTGKPFSSIEPTVELNDVCPIEGTGLILTANEGSPMHAFYIPSLN 357
Query: 348 PAPRWCSFLDSITEELEEKPSDSVYSNYRFITKADVKKLNLTHLIGSKVLRAYMHGFFIN 407
PAPRWCSFLD+ITEE+EE P+ ++Y +Y+F+TK ++ L L HL+G+ V+RAYMHGFFI+
Sbjct: 358 PAPRWCSFLDNITEEMEENPAPTIYDDYKFVTKKELLNLGLDHLVGTGVIRAYMHGFFID 417
Query: 408 TELYDKVALIANPNSYRDXXXXXXXXXXXXXXXXXXXXTGAITTSKVKVNKMLVDKLS-- 465
LY+K LIANP SY + + ++ KVN L +LS
Sbjct: 418 NNLYEKARLIANPFSYEEHRQKIVKERLEKQRASKIR-----SQNRPKVNAGLASRLSYQ 472
Query: 466 -----EKRGDKVAGKVLEDDRFKEMFEDDAFQVDEDDYDYKQLNPVKSARETSEGAAKRI 520
+K G +LED+RFK +F D F+VDED +YKQL+P +S
Sbjct: 473 ENKLRKKTGVTDGPSILEDERFKNVFTDKEFEVDEDTLEYKQLHPSRS----------EA 522
Query: 521 RALTAAEESDEER 533
R LTAAEES+EE+
Sbjct: 523 RGLTAAEESEEEK 535
>Hs13430872 [R] KOG2321 WD40 repeat protein
Length = 638
Score = 378 bits (971), Expect = e-104
Identities = 223/555 (40%), Positives = 306/555 (54%), Gaps = 81/555 (14%)
Query: 3 LKSTSASEISVYQVSGTNVARSLPDWIAKKRKRSL-KNDLEYQNRVELIQDFEFSEASNK 61
++ +S +E+ +Y +S +SLP+W++ ++KR+L K D++ + R+ELIQDFE
Sbjct: 1 MQVSSLNEVKIYSLS---CGKSLPEWLSDRKKRALQKKDVDVRRRIELIQDFEMPTVCTT 57
Query: 62 IKVTPDGNYVMATGTYKPQIHVYDFSNLSLKFERHTDAENIDFCILSEDWTKSVHLQNDR 121
IKV+ DG Y++ATGTYKP++ YD LSLKFER D+E + F ILS+D++K V L NDR
Sbjct: 58 IKVSKDGQYILATGTYKPRVRCYDTYQLSLKFERCLDSEVVTFEILSDDYSKIVFLHNDR 117
Query: 122 TIQFQNKGGIHYTTRIPKFGRSLAYNKVNCDLYVGASSNELYRLNLEQGRFLNPFKLDTE 181
I+F ++ G +Y TRIPKFGR +Y+ +CDLY +S+E+YRLNLEQGR+LNP + D
Sbjct: 118 YIEFHSQSGFYYKTRIPKFGRDFSYHYPSCDLYFVGASSEVYRLNLEQGRYLNPLQTDAA 177
Query: 182 GVNHVSINEVNGLLAASMETNVVEFWDPRSRSRVAKLHLENNLDSADFQV----TCSSFK 237
N IN V+GL A VE WDPR+R+RV L N +AD ++ T S+ K
Sbjct: 178 ENNVCDINSVHGLFATGTIEGRVECWDPRTRNRVGLLDCALNSVTADSEINSLPTISALK 237
Query: 238 -NDGLNFACGTSNGYSYIYDLRTSEPSIVKDQGYGFAVNKIIWLDSVEDSNKILTCDKRI 296
N L A GT+ G I+
Sbjct: 238 FNGALTMAVGTTTGQGKIF----------------------------------------- 256
Query: 297 AKIWNKNDGKAYASMEPSVDINDIEHVPGTGMFFTANEGIPMHTYYIPNLGPAPRWCSFL 356
S+EP D+ND+ P +GM TANE M YYIP LGPAPRWCSFL
Sbjct: 257 ------------TSLEPEHDLNDVCLYPNSGMLLTANETPKMGIYYIPVLGPAPRWCSFL 304
Query: 357 DSITEELEEKPSDSVYSNYRFITKADVKKLNLTHLIGSKVLRAYMHGFFINTELYDKVAL 416
D++TEELEE P +VY +Y+F+TK D++ L LTHLIGS LRAYMHGFF++ LY KV L
Sbjct: 305 DNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKL 364
Query: 417 IANPNSYRDXXXXXXXXXXXXXXXXXXXXTGAITTSKV-KVNKMLVDKLSEKRGDKVAG- 474
+ NP +Y + + K+ KVNK L KL E+ +K
Sbjct: 365 MVNPFAYEEYRKDKIRQKIEETRAQ------RVQLKKLPKVNKELALKLIEEEEEKQKST 418
Query: 475 ---------KVLEDDRFKEMFEDDAFQVDEDDYDYKQLNPVKSARETSEGAAKRIRALTA 525
+L DDRFK MFE+ QVDE+ +++ LNP+ S + SE K++R L
Sbjct: 419 WKKKVKSLPNILTDDRFKVMFENPDLQVDEESEEFRLLNPLVS--KISEKRKKKLRLLEQ 476
Query: 526 AEESDEERIAARDGK 540
E ++E +GK
Sbjct: 477 QELREKEEEEEPEGK 491
>At3g56990 [R] KOG2321 WD40 repeat protein
Length = 711
Score = 373 bits (958), Expect = e-103
Identities = 214/555 (38%), Positives = 322/555 (57%), Gaps = 35/555 (6%)
Query: 3 LKSTSASEISVYQVSGTNVARSLPDWIAKKRKRSLKNDLEYQNRVELIQDFEFSEASNKI 62
LKSTS + + +Y VS A ++P W+ K++R+L+ + Y RVELIQ+ +F A+ +I
Sbjct: 8 LKSTSINGVKLYNVSS---APNVPTWLNPKKQRALRKNPHYMQRVELIQELKFETATTRI 64
Query: 63 KVTPDGNYVMATGTYKPQIHVYDFSNLSLKFERHTDAENIDFCILSEDWTKSVHLQNDRT 122
K TPDG Y++A+G Y PQ+ VY+ + L+LKFERH D+E +DF IL +D++K L DR+
Sbjct: 65 KATPDGEYLIASGIYPPQVKVYELNQLALKFERHLDSEIVDFEILDDDFSKLAFLCADRS 124
Query: 123 IQFQNKGGIHYTTRIPKFGRSLAYNKVNCDLYVGASSNELYRLNLEQGRFLNPFKLDTEG 182
I K G H+T RIP+ GR + Y+ +CDL ASS +LYR+NLEQGRFL+P +
Sbjct: 125 INLHAKYGKHHTLRIPRMGRDMTYDSWSCDLLCAASSPDLYRINLEQGRFLSPLSTQSPA 184
Query: 183 VNHVSINEVNGLLAASMETNVVEFWDPRSRSRVAKLHLENNLDSADFQVTCSSF-KNDGL 241
+N VS + ++GL+A E VEF+D R +S A+++ + A +VT F ++GL
Sbjct: 185 LNVVSRSNLHGLVACGGEDGAVEFFDMRMKSSAARINAVTHGGDAAAEVTAIEFDDSEGL 244
Query: 242 NFACGTSNGYSYIYDLRTSEPSIVKDQGYGFAVNKIIWLDSVEDSN-KILTCDKRIAKIW 300
A G+S G +IYDLRTS P VKD Y + I W ++ K++T +K I +IW
Sbjct: 245 QVAVGSSAGKVFIYDLRTSTPIRVKDHMYESPILNIKWQRTLNTQQPKLITTNKHIVRIW 304
Query: 301 NKNDGKAYASMEPSV-DINDIEHVPGTGMFFTANEGIPMHTYYIPNLGPAPRWCSFLDSI 359
+ N G+ S+EP+ INDI G+G+ A + + +Y+IP LGPAP+WCS L+++
Sbjct: 305 DPNTGEGMTSIEPTQGGINDICVFRGSGLMLLALDSSLIPSYFIPELGPAPKWCSPLENL 364
Query: 360 TEELEEKPSDSVYSNYRFITKADVKKLNLTHLIGSKVLRAYMHGFFINTELYDKVALIAN 419
TEELEE ++Y NY+F+ D++KL LTHLIG+ +L+A MHG+FIN LY K +
Sbjct: 365 TEELEESAQTTIYDNYKFLAMEDLEKLQLTHLIGTDLLKASMHGYFINYHLYKKALAVIE 424
Query: 420 PNSYRDXXXXXXXXXXXXXXXXXXXXTGAITTSK--VKVNKMLVDKL----SEKRG---- 469
P ++ D T IT + KVN+ L +L SE+
Sbjct: 425 PFAFDD------YLERRKQEKLEEQRTQRITKKRRLPKVNRDLAARLHGDESEEENKTAE 478
Query: 470 -DKVAGKVLE------------DDRFKEMFEDDAFQVDEDDYDYKQLNPVKSARETSEGA 516
+ KVL+ D RF MF++ FQ+D+D Y+Y L+PV S+++
Sbjct: 479 DGEATKKVLKKKKPILTDEHFVDGRFGSMFQNPDFQIDKDSYEYGVLHPVASSKKQPSLL 538
Query: 517 AKRIRALTAAEESDE 531
+ A++ +E+ +
Sbjct: 539 DEHFEAVSDDDENSD 553
>7298152 [R] KOG2321 WD40 repeat protein
Length = 721
Score = 359 bits (922), Expect = 7e-99
Identities = 188/536 (35%), Positives = 311/536 (57%), Gaps = 20/536 (3%)
Query: 9 SEISVYQVSGTNVARSLPDWIAKKRKRS-LKNDLEYQNRVELIQDFEFSEASNKIKVTPD 67
+E++ ++ + +S+PDW+ +RKRS L ++ + ++ELIQDF+ I+++PD
Sbjct: 4 NEVNDVKIYNLSAGKSVPDWLTDRRKRSQLMKKVDSRRQIELIQDFDMPGVCTSIRMSPD 63
Query: 68 GNYVMATGTYKPQIHVYDFSNLSLKFERHTDAENIDFCILSEDWTKSVHLQNDRTIQFQN 127
Y++ATGTYKP++ ++ SNLS+KFER DAE F ++S+D++K V LQ DR ++
Sbjct: 64 QQYILATGTYKPRVKCFEVSNLSIKFERCFDAEVTTFEVISDDYSKMVFLQCDRYVEIHA 123
Query: 128 KGGIHYTTRIPKFGRSLAYNKVNCDLYVGASSNELYRLNLEQGRFLNPFKLDTEGVNHVS 187
G HY RIP+FGR + Y+K +CD+++ +++RLNLE+G+FL PF+ D +N
Sbjct: 124 AHGRHYRLRIPRFGRDMKYHKPSCDMFIVGVGRDIFRLNLERGQFLQPFETDGSCLNACE 183
Query: 188 INEVNGLLAASMETNVVEFWDPRSRSRVAKLHLENNLDSA-DF-QVTCSSFKNDGLNFAC 245
+N + LL A + VE WDPR++ R + L + L +F VT F+N GL+
Sbjct: 184 VNPEHHLLVAGTKEGTVEAWDPRTKQRCSTLDVAMKLPGVKEFPSVTALKFRN-GLHMGV 242
Query: 246 GTSNGYSYIYDLRTSEPSIVKDQGYGFAVNKIIWLDSVEDSNKILTCDKRIAKIWNKNDG 305
GT++G+ IYD+R +P +VK+ + ++ + + N + + D+ K+W++ G
Sbjct: 243 GTASGHVLIYDIRAKQPLLVKNHLNRLPIKRLAFNPA---QNAVYSLDEATLKLWDEQTG 299
Query: 306 KAYASMEPSVDINDIEHVPGTGMFFTANEGIPMHTYYIPNLGPAPRWCSFLDSITEELEE 365
K A +E + ND +P TGMFF A E + M TYY+P +GPAPRWCSFLD++TEE+E
Sbjct: 300 KQIAYVESTSSFNDFCTIPDTGMFFVAQEDVKMMTYYVPAMGPAPRWCSFLDNLTEEIES 359
Query: 366 KPSDSVYSNYRFITKADVKKLNLTHLIGSKVLRAYMHGFFINTELYDKVALIANPNSYRD 425
+ ++VY +Y+F+T ++ +L + HL+GS +L+ YMHG+F++ LY+K + P ++
Sbjct: 360 EVVENVYDDYQFVTAKELAELGMEHLVGSNLLKGYMHGYFMDARLYNKAKAVVEPFAFDR 419
Query: 426 XXXXXXXXXXXXXXXXXXXXTGAITTSKVKVNKMLVDKLSEKRGD-------KVAGKVLE 478
I + KVNK L K+ +++ + + +LE
Sbjct: 420 FRKDKIRQEIESERKSRL----QIESKLPKVNKELALKIMDEQANPSNSAKQRNVPSLLE 475
Query: 479 DDRFKEMFEDDAFQVDEDDYDYKQLNPVKSARETSEG--AAKRIRALTAAEESDEE 532
D RFK MFE+ F+V++ +Y+ L PV + + S+ KR+ AE +E
Sbjct: 476 DSRFKAMFENADFEVNKSAEEYRLLAPVLNRLDKSKAKELKKRVEVAHVAELHADE 531
>CE04474 [R] KOG2321 WD40 repeat protein
Length = 754
Score = 329 bits (844), Expect = 8e-90
Identities = 192/551 (34%), Positives = 302/551 (53%), Gaps = 34/551 (6%)
Query: 3 LKSTSASEISVYQVSGTNVARSLPDWIAKKRKRSLKN-DLEYQNRVELIQDFEFSEASNK 61
++ ++ +++ +Y +S +SLP+W++ + +R L+ + + + R++LIQDFE + SN
Sbjct: 1 MEVSTVNDVKIYNLSA---GKSLPEWMSSRTRRKLEQRNTDVRQRIQLIQDFEMPDVSNT 57
Query: 62 IKVTPDGNYVMATGTYKPQIHVYDFSNLSLKFERHTDAENIDFCILSEDWTKSVHLQNDR 121
+ +TPDG YV A+G YKP + YD +NLSLKFER DA+ I LS+D++K V L+ +R
Sbjct: 58 VNITPDGKYVWASGNYKPWLRCYDLNNLSLKFERGLDADVIKLIPLSDDYSKVVILEEER 117
Query: 122 TIQFQNKGGIHYTTRIPKFGRSLAYNKVNCDLYVGASSNELYRLNLEQGRFLNPFKLDTE 181
I+ G ++ R+P GR +A ++ + DLY+ S +E+YR NLEQG +L PF+ T
Sbjct: 118 WIEMHAMLGRYFRMRMPCQGRDMALSEESSDLYLVGSKSEVYRFNLEQGCWLTPFE-STA 176
Query: 182 GVNHVSINEVNGLLAASMETNVVEFWDPRSRSRVAKLHLENNLDS-----ADFQVTCSSF 236
+N V + + L+ VVE WD R +S L ++++S VT +F
Sbjct: 177 PLNCVQVCTEHQLICCGTTNGVVEAWDHRDKSLCGTLDAGSSVNSHIGENQKVAVTSVAF 236
Query: 237 KNDGLNFACGTSNGYSYIYDLRTSEPSIVKDQGYGFAVNKIIWLDSVEDSNKILTCDKRI 296
+D L+ GTS G IYDLR P ++KD +NK+ ++ +D + + + D R+
Sbjct: 237 -SDPLHIGVGTSTGQILIYDLRARRPLLIKDHNNELPINKLDFIKR-DDGDVVASMDSRM 294
Query: 297 AKIWNKNDGKAYASMEPSVDINDIEHVPGTGMFFTANEGIPMHTYYIPNLGPAPRWCSFL 356
K+W++ DG A++E + +ND P +GMFF ANE M Y+IP LGPAP+WCS+L
Sbjct: 295 MKLWHEEDGSPMAAIENTCPLNDFCRFPNSGMFFFANEAPKMLQYFIPQLGPAPKWCSYL 354
Query: 357 DSITEELEEKPSDSVYSNYRFITKADVKKLNLTHLIGSKVLRAYMHGFFINTELYDKVAL 416
+++TEE+EE + +VY NYRF+TK + L L+ LIG+ VLRAYMHG+FI+ LY+K
Sbjct: 355 ENLTEEMEETET-TVYDNYRFVTKKQLDDLGLSGLIGTNVLRAYMHGYFIDARLYNKAQT 413
Query: 417 IANPNSYR------------DXXXXXXXXXXXXXXXXXXXXTGAITTSKVKVNKMLVDKL 464
P +Y D A + +
Sbjct: 414 QMQPFAYEKYKDEKIKSMIADEREESAVKKKVEKLPAVNKALAARLRDEASAANQKAETK 473
Query: 465 SEKRGDK---VAGKVLEDDRFKEMFEDDAFQVDEDDYDYKQLNPVKSARETSEGAAK-RI 520
EK+ K A +L DDRFK++FE + F+VDE + +K+A + AK +
Sbjct: 474 KEKKKSKKSDAATSLLADDRFKKLFESEDFEVDETSEQF-----LKNASIAQKMKAKGPV 528
Query: 521 RALTAAEESDE 531
+ EES++
Sbjct: 529 EVESEGEESED 539
>ECU08g0310 [R] KOG2321 WD40 repeat protein
Length = 298
Score = 125 bits (315), Expect = 2e-28
Identities = 67/213 (31%), Positives = 114/213 (53%), Gaps = 8/213 (3%)
Query: 46 RVELIQDFEFSEASNKIKVTPDGNYVMATGTYKPQIHVYDFSNLSLKFERHTDAENIDFC 105
+V + + S +S + ++ DG Y+++ G YKP I +YD +NLSLK ERH +++ +
Sbjct: 5 KVSMTNNLGHSASSTDMSLSDDGRYLLSVGVYKPSIKIYDLANLSLKVERHLESDPVRVI 64
Query: 106 ILSEDWTKSVHLQNDRTIQFQNKGGIHYTTRIPKFGRSLAYNKVNCDLYVGASSNELYRL 165
L ED +K+ L+NDRTI+F K G H ++P + N+ ++ G + +YR
Sbjct: 65 PLVEDASKACILRNDRTIEFHAKYGYHEGIKVPTPCFDICLNRFRAEILSGGTGLSVYRF 124
Query: 166 NLEQGRFLNPFKLDTEGVNHVSINEVNGLLAASMETNVVEFWDPRSRSRVAKLHLENNLD 225
NL+QGRFL + + + + +NE NGL+ ++ ++F D R + V + +
Sbjct: 125 NLDQGRFLRSYAVTIGEIWSIGMNECNGLIGVGGDSK-MQFIDQRCKEIVKSVEYNESPS 183
Query: 226 SADFQVTCSSFKNDGLNFACGTSNGYSYIYDLR 258
S SF ++G++ GT G Y +DLR
Sbjct: 184 SI-------SFSDNGIDLGVGTREGSVYFHDLR 209
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.132 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,865,706
Number of Sequences: 60738
Number of extensions: 1597402
Number of successful extensions: 4044
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4009
Number of HSP's gapped (non-prelim): 12
length of query: 700
length of database: 30,389,216
effective HSP length: 113
effective length of query: 587
effective length of database: 23,525,822
effective search space: 13809657514
effective search space used: 13809657514
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)