ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI1237 good J KOG0401 Translation, ribosomal structure and biogenesis Translation initiation factor 4F, ribosome/mRNA-bridging subunit (eIF-4G)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI1237 424928 421866 -1021
(1021 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL049c [J] KOG0401 Translation initiation factor 4F ribosome/mR... 514 e-145
YGR162w [J] KOG0401 Translation initiation factor 4F ribosome/mR... 511 e-144
SPAC17C9.03 [J] KOG0401 Translation initiation factor 4F ribosom... 224 5e-58
Hs10092601 [J] KOG0401 Translation initiation factor 4F ribosome... 122 3e-27
At3g60240_1 [J] KOG0401 Translation initiation factor 4F ribosom... 120 1e-26
Hs4503539 [J] KOG0401 Translation initiation factor 4F ribosome/... 115 3e-25
7304373 [J] KOG0401 Translation initiation factor 4F ribosome/mR... 110 1e-23
Hs4826710 [J] KOG0401 Translation initiation factor 4F ribosome/... 88 6e-17
At5g57870 [J] KOG0401 Translation initiation factor 4F ribosome/... 85 5e-16
At2g24050 [J] KOG0401 Translation initiation factor 4F ribosome/... 85 5e-16
CE02277 [J] KOG0401 Translation initiation factor 4F ribosome/mR... 83 2e-15
7301059 [J] KOG0401 Translation initiation factor 4F ribosome/mR... 81 7e-15
7303385 [J] KOG0401 Translation initiation factor 4F ribosome/mR... 73 3e-12
At1g62410 [J] KOG0401 Translation initiation factor 4F ribosome/... 59 4e-08
>YGL049c [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 914
Score = 514 bits (1324), Expect = e-145
Identities = 282/562 (50%), Positives = 344/562 (61%), Gaps = 24/562 (4%)
Query: 469 TKPREEAEVEDDGKITMTDFLQKLKEVSPVDDIYSFQYPSDITPPNDRYKKTSIKYAYGP 528
T E D T++ L+ L + P+ DIY F YP ++ P+ +YKK S+KY YGP
Sbjct: 366 TVKETEPSTSDIEMPTVSQLLETLGKAQPISDIYEFAYPENVERPDIKYKKPSVKYTYGP 425
Query: 529 DFLYQFKEKVDVKYDPAWMAEMTSKIVIPP----KKPGSSGRGEDRFSKGKVGSLRSEXX 584
FL QFK+K+ + DPAW+ ++SKIVIPP KP SGR F + +
Sbjct: 426 TFLLQFKDKLKFRPDPAWVEAVSSKIVIPPHIARNKPKDSGRFGGDFRSPSMRGMDHTSS 485
Query: 585 XXXXXXXXXXXXXXXXXXXXXYTSRKDXXXXXXXXXXXX-XXXXAPLVPSANRWVPKSKM 643
YTSRKD APLVPSANRW+PKS++
Sbjct: 486 SRVSSKRRSKRMGDDRRSNRGYTSRKDREKAAEKAEEQAPKEEIAPLVPSANRWIPKSRV 545
Query: 644 KKTEVKLAPDG-TELYDAEEASRKMKSLLNKLTLEMFEPISDDIMKIANQSRWEEKGETL 702
KKTE KLAPDG TEL+D EE RKMKSLLNKLTLEMF+ IS +I+ IANQS+WE+ GETL
Sbjct: 546 KKTEKKLAPDGKTELFDKEEVERKMKSLLNKLTLEMFDSISSEILDIANQSKWEDDGETL 605
Query: 703 KIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDSETPDKTGSHLVLHYLVQRCQT 762
KIVI+QIF+KACDEPHWSSMYAQLCGKVVKDLD +IKD E K G LVLHYLV RC
Sbjct: 606 KIVIEQIFHKACDEPHWSSMYAQLCGKVVKDLDPNIKDKENEGKNGPKLVLHYLVARCHE 665
Query: 763 EFQTGWTDQLPTNEDGTPLQPEMMSDEYYKMAAAKRRGLGLVRFIGFLYRSNLLTSRMVF 822
EF+ GW D+LP EDG PL+PEMMSDEYY AAAKRRGLGLVRFIG+LY NLLT +M+F
Sbjct: 666 EFEKGWADKLPAGEDGNPLEPEMMSDEYYIAAAAKRRGLGLVRFIGYLYCLNLLTGKMMF 725
Query: 823 FCFKRLMKDIQNSPTEDTLESVCELLETIGEQFEGARIQVTAEAVIEGSSLLDTLFDQIK 882
CF+RLMKD+ N P+E+TLESV ELL T+GEQFE + VT +A +EGS LLD LF ++
Sbjct: 726 ECFRRLMKDLNNDPSEETLESVIELLNTVGEQFEHDKF-VTPQATLEGSVLLDNLFMLLQ 784
Query: 883 NVIENGDISSRIKFKLIDIVELREKRNWNSKNKNDGPKTIAQIXXXXXXXXXXXXXXXXX 942
++I+ G IS+RIKFKLID+ ELRE ++WNS K+ GPKTI QI
Sbjct: 785 HIIDGGTISNRIKFKLIDVKELREIKHWNSAKKDAGPKTIQQI--------HQEEEQLRQ 836
Query: 943 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQNRDGFTTTRSSSVRYSE---PKKEEQAP 999
N RD F +T++ S R ++ K EE +
Sbjct: 837 KKNSQRSNSRFNNHNQSNSNRYSSNRRNMQNTQRDSFASTKTGSFRNNQRNARKVEEVSQ 896
Query: 1000 TPTKSSGGAANMFDALMDAEDD 1021
P ANMFDALM+ + D
Sbjct: 897 AP------RANMFDALMNNDGD 912
>YGR162w [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 952
Score = 511 bits (1316), Expect = e-144
Identities = 292/584 (50%), Positives = 347/584 (59%), Gaps = 47/584 (8%)
Query: 466 DVETKPREEAEVE------DDGKITMTDFLQKLKEVSPVDDIYSFQYPSDITPPNDRYKK 519
D TK EAE+E DDG T++ L LK+ +P++D++SF YP I P+ +YKK
Sbjct: 386 DAGTKIGLEAEIETTTDETDDGTNTVSHILNVLKDATPIEDVFSFNYPEGIEGPDIKYKK 445
Query: 520 TSIKYAYGPDFLYQFKEKVDVKYDPAWMAEMTSKIVIPP------------KKPGSSGRG 567
+KY YGP FL QFK+K++VK D W+ SKIVIPP + +S RG
Sbjct: 446 EHVKYTYGPTFLLQFKDKLNVKADAEWVQSTASKIVIPPGMGRGNRSRDSGRFGNNSSRG 505
Query: 568 EDRFSKGKVGSLRSEXXXXXXXXXXXXXXXXXXXXXXXYTSRKDXXXXXXXXXXXXXXXX 627
D F V ++ YTSR+D
Sbjct: 506 HD-FRNTSVRNMDDRANSRTSSKRRSKRMNDDRRSNRSYTSRRDRERGSYRNEEKREDDK 564
Query: 628 -----APLVPSANRWVPKSKMKKTEVKLAPDG-TELYDAEEASRKMKSLLNKLTLEMFEP 681
APLVPSANRWVPK K KKTE KLAPDG TEL D +E RKMKSLLNKLTLEMF+
Sbjct: 565 PKEEVAPLVPSANRWVPKFKSKKTEKKLAPDGKTELLDKDEVERKMKSLLNKLTLEMFDA 624
Query: 682 ISDDIMKIANQSRWEEKGETLKIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDS 741
IS +I+ IAN S WE GETLK VI+QIF KACDEPHWSSMYAQLCGKVVK+L+ I D
Sbjct: 625 ISSEILAIANISVWETNGETLKAVIEQIFLKACDEPHWSSMYAQLCGKVVKELNPDITDE 684
Query: 742 ETPDKTGSHLVLHYLVQRCQTEFQTGWTDQLPTNEDGTPLQPEMMSDEYYKMAAAKRRGL 801
KTG LVLHYLV RC EF GWTD+LPTNEDGTPL+PEMMS+EYY A+AKRRGL
Sbjct: 685 TNEGKTGPKLVLHYLVARCHAEFDKGWTDKLPTNEDGTPLEPEMMSEEYYAAASAKRRGL 744
Query: 802 GLVRFIGFLYRSNLLTSRMVFFCFKRLMKDIQNSPTEDTLESVCELLETIGEQFEGARIQ 861
GLVRFIGFLYR NLLT +M+F CF+RLMKD+ +SP+E+TLESV ELL T+GEQFE +
Sbjct: 745 GLVRFIGFLYRLNLLTGKMMFECFRRLMKDLTDSPSEETLESVVELLNTVGEQFETDSFR 804
Query: 862 VTAEAVIEGSSLLDTLFDQIKNVIENGDISSRIKFKLIDIVELREKRNWNSKNKNDGPKT 921
T +A +EGS LLD+LF + N+I+ ISSRIKFKLIDI ELR +NWNS K++GPKT
Sbjct: 805 -TGQATLEGSQLLDSLFGILDNIIQTAKISSRIKFKLIDIKELRHDKNWNSDKKDNGPKT 863
Query: 922 IAQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQNRDGFTT 981
I QI ++D F T
Sbjct: 864 IQQIHEEEERQRQLKNNSRSNSRRTNNSSNRHSFRRDAPPA------------SKDSFIT 911
Query: 982 TRSSSVRYSE----PKKEEQAPTPTKSSGGAANMFDALMDAEDD 1021
TR+ S R S+ PK+E APT T A NMF ALM DD
Sbjct: 912 TRTYSQRNSQRAPPPKEEPAAPTST-----ATNMFSALMGESDD 950
>SPAC17C9.03 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 1403
Score = 224 bits (571), Expect = 5e-58
Identities = 131/304 (43%), Positives = 184/304 (60%), Gaps = 20/304 (6%)
Query: 628 APLVPSANRWVPKSKMKKTEVKLAPDGTELYDAEEASRKMKSLLNKLTLEMFEPISDDIM 687
APL SANRW PK +K D L E RK+K LNK+TLE F+ ISD I+
Sbjct: 973 APLQLSANRWQPKKLTEKPAETKGEDEEALLPPEVVQRKVKGSLNKMTLEKFDKISDQIL 1032
Query: 688 KIANQSRWEEKGETLKIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDSETPDKT 747
+IA QSR E G TLK VIQ F KA DEP++S+MYA+ K++ +DDSI+D DK
Sbjct: 1033 EIAMQSRKENDGRTLKQVIQLTFEKATDEPNFSNMYARFARKMMDSIDDSIRDEGVLDKN 1092
Query: 748 -----GSHLVLHYLVQRCQTEFQTGWTDQLPTNEDGTPLQPEMMSDEYYKMAAAKRRGLG 802
G L YL+ RCQ +F+ GW LP+ + G + E+MSDEYY AA KRRGLG
Sbjct: 1093 NQPVRGGLLFRKYLLSRCQEDFERGWKANLPSGKAG---EAEIMSDEYYVAAAIKRRGLG 1149
Query: 803 LVRFIGFLYRSNLLTSRMVFFCFKRLMKDIQNSPTEDTLESVCELLETIGEQFEGARIQV 862
LVRFIG L++ ++L+ +++ C KRL+ ++ P E+ +ES+C LL T+G V
Sbjct: 1150 LVRFIGELFKLSMLSEKIMHECIKRLLGNV-TDPEEEEIESLCRLLMTVG---------V 1199
Query: 863 TAEAVIEGSSLLDTLFDQIKNVIENGDISSRIKFKLIDIVELREKRNWNSKNK-NDGPKT 921
+A +G + +D +++ + + ++ SRIKF L+D+++ R K W KN+ GPKT
Sbjct: 1200 NIDATEKGHAAMDVYVLRMETITKIPNLPSRIKFMLMDVMDSR-KNGWAVKNEVEKGPKT 1258
Query: 922 IAQI 925
IA+I
Sbjct: 1259 IAEI 1262
>Hs10092601 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 1585
Score = 122 bits (306), Expect = 3e-27
Identities = 95/306 (31%), Positives = 149/306 (48%), Gaps = 42/306 (13%)
Query: 630 LVPSANRWVPKSKMKKTEVKLAPDGTELYDAEEASRKMKSLLNKLTLEMFEPISDDIMKI 689
L + N W P K D E +E RK++S+LNKLT +MF + + +
Sbjct: 726 LKKAENAWKPSQKRDSQA-----DDPENIKTQELFRKVRSILNKLTPQMFNQLMKQVSGL 780
Query: 690 ANQSRWEEKGETLKIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDSETPDKTGS 749
+ E LK VI +F KA DEP +S YA +C +V + ++ P T +
Sbjct: 781 TVDTE-----ERLKGVIDLVFEKAIDEPSFSVAYANMCRCLVTL---KVPMADKPGNTVN 832
Query: 750 HLVLHYLVQRCQTEFQTGWTD-------QLPTNEDGTPLQPEMMSDEYYKMA-AAKRRGL 801
L L+ RCQ EF+ D Q P + + DE + A+RR +
Sbjct: 833 FRKL--LLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERTRLHDELEEAKDKARRRSI 890
Query: 802 GLVRFIGFLYRSNLLTSRMVFFCFKRLMKDIQNSPTEDTLESVCELLETIGE--QFEGAR 859
G ++FIG L++ +LT ++ C +L+K + E++LE +C LL TIG+ FE A+
Sbjct: 891 GNIKFIGELFKLKMLTEAIMHDCVVKLLK----NHDEESLECLCRLLTTIGKDLDFEKAK 946
Query: 860 IQVTAEAVIEGSSLLDTLFDQIKNVIENGDISSRIKFKLIDIVELREKRNWNSKNKNDGP 919
+ +D F+Q++ +++ SSRI+F L D+++LR NW S+ + GP
Sbjct: 947 PR------------MDQYFNQMEKIVKERKTSSRIRFMLQDVIDLR-LCNWVSRRADQGP 993
Query: 920 KTIAQI 925
KTI QI
Sbjct: 994 KTIEQI 999
>At3g60240_1 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 1528
Score = 120 bits (300), Expect = 1e-26
Identities = 91/299 (30%), Positives = 152/299 (50%), Gaps = 31/299 (10%)
Query: 630 LVPSANRWVPKSKMKKTEVKLAPDGTELYDAEEASRKMKSLLNKLTLEMFEPISDDIMKI 689
L PS + P M K E K GT + + R++KS+LNKLT + FE + + + +
Sbjct: 882 LFPSPH--TPMQVMHKAERKYQV-GTIADEEQAKQRQLKSILNKLTPQNFEKLFEQVKSV 938
Query: 690 ANQSRWEEKGETLKIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDSETPDKTGS 749
+ TL VI QIF+KA EP + MYA C + L D ++ E T
Sbjct: 939 NI-----DNAVTLSGVISQIFDKALMEPTFCEMYADFCFHLSGALPDFNENGEKI--TFK 991
Query: 750 HLVLHYLVQRCQTEFQTGWTDQLPTN---EDGTPLQPEMMSDEYYKMAAAKRRGLGLVRF 806
L+L+ +CQ EF+ G ++ + E+G Q E +E K +RR LG +R
Sbjct: 992 RLLLN----KCQEEFERGEKEEEEASRVAEEGQVEQTEEEREE--KRLQVRRRMLGNIRL 1045
Query: 807 IGFLYRSNLLTSRMVFFCFKRLMKDIQNSPTEDTLESVCELLETIGEQFEGARIQVTAEA 866
IG LY+ +LT +++ C ++L+ P E+ +E++C+L+ TIG + + +
Sbjct: 1046 IGELYKKRMLTEKIMHACIQKLL-GYNQDPHEENIEALCKLMSTIGVMIDHNKAKFQ--- 1101
Query: 867 VIEGSSLLDTLFDQIKNVIENGDISSRIKFKLIDIVELREKRNWNSKNKNDGPKTIAQI 925
+D F+++K + ++SSR++F LI+ ++LR K W + K +GPK I ++
Sbjct: 1102 -------MDGYFEKMKMLSCKQELSSRVRFMLINAIDLR-KNKWQERMKVEGPKKIEEV 1152
>Hs4503539 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 907
Score = 115 bits (288), Expect = 3e-25
Identities = 87/301 (28%), Positives = 155/301 (50%), Gaps = 28/301 (9%)
Query: 633 SANRWVPKSKMKKTEVKLAPDGTELYDAEEAS-RKMKSLLNKLTLEMFEPISDDIMKIAN 691
+A +W+P ++ + A + + +A RK++ +LNKLT E F+ + +++ +
Sbjct: 46 NAQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGV 105
Query: 692 QSRWEEKGETLKIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLD--DSIKDSETPDKTGS 749
+S+ KG L IV +KA +EP +SS+YAQLC ++ +D D P + S
Sbjct: 106 ESKLILKGVILLIV-----DKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQS 160
Query: 750 HLVLHYLVQRCQTEFQTGWTDQLPTNEDGTPLQPEMMSDEYYKMAAAKRRGLGLVRFIGF 809
L+ + Q EF+ + ++ PL PE E + A AK + LG ++FIG
Sbjct: 161 TTFRRLLISKLQDEFENRTRNVDVYDKRENPLLPE----EEEQRAIAKIKMLGNIKFIGE 216
Query: 810 LYRSNLLTSRMVFFCFKRLM---KDIQNSPTEDTLESVCELLETIGEQFEGARIQVTAEA 866
L + +L+ ++ C K L+ K +Q + LE +C+++ T+G + + R
Sbjct: 217 LGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECLCQIMRTVGPRLDHER------- 269
Query: 867 VIEGSSLLDTLFDQIKNVIENGDISSRIKFKLIDIVELREKRNWNSKNK--NDGPKTIAQ 924
SL+D F ++ +++ + ++ +RI+F L D VELRE +W + ++GPKTI Q
Sbjct: 270 ---AKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELRE-HHWVPRKAFLDNGPKTINQ 325
Query: 925 I 925
I
Sbjct: 326 I 326
>7304373 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 1666
Score = 110 bits (274), Expect = 1e-23
Identities = 83/310 (26%), Positives = 153/310 (48%), Gaps = 28/310 (9%)
Query: 630 LVPSANRWVPKSKMKKTEVKLAPDGTELYDAEEASRKMKSLLNKLTLEMFEPISDDIMKI 689
L + N W P+ K D + +E R+++ +LNKLT E F+ + ++I+K+
Sbjct: 719 LSENENAWRPRVLNKSDGDS---DAKSALEKDELVRRVRGILNKLTPERFDTLVEEIIKL 775
Query: 690 ANQSRWEEKGETLKIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDSETPDKTGS 749
+ + + VI +F KA DEP++S YA+LC ++ ++ + E+ K+ S
Sbjct: 776 KIDTP-----DKVDEVIVLVFEKAIDEPNFSVSYARLCQRLAAEVKVIDERMESETKSNS 830
Query: 750 HLVLHYLVQRCQTEFQTGWTDQLPTNEDGTPLQPEMM----SDEYYKMAA--------AK 797
+ L+ + + EF + + P+ ++ ++E ++ A +
Sbjct: 831 AHFRNALLDKTEQEFTQNVSQSTAKEKKLQPIVDKIKKCTDANEKAELEAFLEEEERKIR 890
Query: 798 RRGLGLVRFIGFLYRSNLLTSRMVFFCFKRLMKDIQNSPTEDTLESVCELLETIGEQFEG 857
RR G VRFIG L++ ++LT ++++ C L+ N +ED LE +C+LL T+G +FE
Sbjct: 891 RRSGGTVRFIGELFKISMLTGKIIYSCIDTLL----NPHSEDMLECLCKLLTTVGAKFEK 946
Query: 858 ARIQVTAEAVIEGSSLLDTLFDQI--KNVIENGDISSRIKFKLIDIVELREKRNWNSKNK 915
+ + T I K + +SSR++F L D+++LR K W + ++
Sbjct: 947 TPVNSKDPSRCYSLEKSITRMQAIASKTDKDGARVSSRVRFMLQDVIDLR-KNKWQT-SR 1004
Query: 916 NDGPKTIAQI 925
N+ PKT+ QI
Sbjct: 1005 NEAPKTMGQI 1014
>Hs4826710 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 1396
Score = 88.2 bits (217), Expect = 6e-17
Identities = 75/298 (25%), Positives = 137/298 (45%), Gaps = 38/298 (12%)
Query: 637 WVPKSKMKKTEVKLAPDGTELYDAEEASRKMKSLLNKLTLEMFEPISDDIMKIANQSRWE 696
W P SK + + + ++ R+ +S+LNKLT +MF+ + + ++A +
Sbjct: 539 WKPSSKRTAADKDRGEEDADGSKTQDLFRRWRSILNKLTPQMFQQLMKQVTQLAIDTEDA 598
Query: 697 EKGETLKIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDSETPDKTGSHLVLHYL 756
KG +L +++ F W + L + + T + L
Sbjct: 599 SKG-SLTSFLRRPFQSPTSL--WPIQHVPL--------PHGAESAHYGKPTVTVNFRKLL 647
Query: 757 VQRCQTEFQTGWTD-------QLPTNEDGTPLQPEMMSDEYYKMA-AAKRRGLGLVRFIG 808
+ RCQ EF+ D Q +E T + E + +E + A+R LG ++FIG
Sbjct: 648 LNRCQKEFEKDKDDDEVFEKKQKEMDEAATAEERERLKEELEEARDIARRCSLGNIKFIG 707
Query: 809 FLYRSNLLTSRMVFFCFKRLMKDIQNSPTEDTLESVCELLETIGEQ--FEGARIQVTAEA 866
L++ +LT ++ C +L+K+ E++LE +C LL TIG+ FE A+ +
Sbjct: 708 ELFKLKMLTEAIMHDCVVKLLKNHD----EESLECLCRLLTTIGKDLDFEKAKPR----- 758
Query: 867 VIEGSSLLDTLFDQIKNVIENGDISSRIKFKLIDIVELREKRNWNSKNKNDGPKTIAQ 924
+D F+Q++ +I+ SSRI+F L D+++LR NW + + GP+ + +
Sbjct: 759 -------MDQYFNQMEKIIKEKKTSSRIRFMLQDVLDLRGS-NWVPRRGDQGPRPLTR 808
>At5g57870 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 780
Score = 85.1 bits (209), Expect = 5e-16
Identities = 68/289 (23%), Positives = 132/289 (45%), Gaps = 24/289 (8%)
Query: 639 PKSKMKKTEVKLAPDGTELYDAEEASRKMKSLLNKLTLEMFEPISDDIMKIANQSRWEEK 698
P + K EV + L + + + +K +LNKLT E ++ + +++ S
Sbjct: 191 PAPVLVKAEVPWSARRGNLSENDRVLKTVKGILNKLTPEKYDLLKGQLIESGITS----- 245
Query: 699 GETLKIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDSETPDKTGSHLVL-HYLV 757
+ LK VI IF+KA EP + MYA+LC D++D + + + L+
Sbjct: 246 ADILKGVITLIFDKAVLEPTFCPMYAKLC----SDINDQLPTFPPAEPGDKEITFKRVLL 301
Query: 758 QRCQTEFQTGWTDQLPTNEDGTPLQPEMMSDEYYKMAAAKRRGLGLVRFIGFLYRSNLLT 817
CQ F+ + + P Q +D K K + LG +R IG L + ++
Sbjct: 302 NICQEAFEGASQLREELRQMSAPDQEAERND---KEKLLKLKTLGNIRLIGELLKQKMVP 358
Query: 818 SRMVFFCFKRLM-KDIQNSPTEDTLESVCELLETIGEQFEGARIQVTAEAVIEGSSLLDT 876
++V + L+ D + P E+ +E++C +TIG+Q +G ++ + D
Sbjct: 359 EKIVHHIVQELLGADEKVCPAEENVEAICHFFKTIGKQLDGN---------VKSKRINDV 409
Query: 877 LFDQIKNVIENGDISSRIKFKLIDIVELREKRNWNSKNKNDGPKTIAQI 925
F +++ + +N + R++F + +I+++R W + + +TI +I
Sbjct: 410 YFKRLQALSKNPQLELRLRFMVQNIIDMR-SNGWVPRREEMKARTITEI 457
>At2g24050 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 747
Score = 85.1 bits (209), Expect = 5e-16
Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 24/289 (8%)
Query: 639 PKSKMKKTEVKLAPDGTELYDAEEASRKMKSLLNKLTLEMFEPISDDIMKIANQSRWEEK 698
P + K EV + L D + + +K +LNKLT E +E + ++ S
Sbjct: 150 PTPVLIKAEVPWSAKRGALSDKDRVVKSVKGILNKLTPEKYELLKGQLIDAGITS----- 204
Query: 699 GETLKIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDSETPDKTGSHLVL-HYLV 757
+ LK VIQ IF A +P + MYA LC D++ + + + G + L+
Sbjct: 205 ADILKEVIQLIFENAILQPTFCEMYALLC----FDINGQLPSFPSEEPGGKEITFKRVLL 260
Query: 758 QRCQTEFQTGWTDQLPTNEDGTPLQPEMMSDEYYKMAAAKRRGLGLVRFIGFLYRSNLLT 817
CQ F+ + E P+ + K AK R LG +R IG L + ++
Sbjct: 261 NNCQEAFEGAGKLK---EEIRQMTNPDQEMERMDKEKMAKLRTLGNIRLIGELLKQKMVP 317
Query: 818 SRMVFFCFKRLM-KDIQNSPTEDTLESVCELLETIGEQFEGARIQVTAEAVIEGSSLLDT 876
++V + L+ D + P E +E++C+ TIG+Q + + + DT
Sbjct: 318 EKIVHHIVQELLGDDTKACPAEGDVEALCQFFITIGKQLDDSP---------RSRGINDT 368
Query: 877 LFDQIKNVIENGDISSRIKFKLIDIVELREKRNWNSKNKNDGPKTIAQI 925
F ++K + + + R++F + ++V+LR + W + + K I +I
Sbjct: 369 YFGRLKELARHPQLELRLRFMVQNVVDLRANK-WVPRREEVKAKKINEI 416
>CE02277 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 1156
Score = 83.2 bits (204), Expect = 2e-15
Identities = 73/306 (23%), Positives = 146/306 (46%), Gaps = 39/306 (12%)
Query: 630 LVPSANRWVPKSKMKKTEVKLAPDGTELYDAEEASRKMKSLLNKLTLEMFEPISDDIMKI 689
L S + W P + K E + + + E +K++SL+NK+T P++++ +
Sbjct: 489 LPSSKDAWKP-DRQKTAEAVASEEAAVI----EVCKKVRSLMNKVTPTSQRPLTEEFISY 543
Query: 690 ANQSRWEEKGETLKIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDSETPDKTGS 749
S + + ++IV F+KA +EP + ++YA++C + + E G
Sbjct: 544 NVSSNDAQLAQVVEIV----FDKAVEEPKFCALYAEMC--------KAQANHELSQTGGK 591
Query: 750 HLVLHYLVQRCQTEFQTGW---TDQLPTNE-DGTPLQPEMMSDEYYKMAAAKRRGLGLVR 805
+ ++ R Q FQ D+L E + P++ E+M E + +RR G++
Sbjct: 592 SAFRNKVLTRTQMTFQDKKDIDADKLAIIEKEEDPVKKELMLAE--EKQKFRRRKFGVMT 649
Query: 806 FIGFLYRSNLLTSRMVFFCFKRLMKDIQNSP------TEDTLESVCELLETIGEQFEGAR 859
F+G+LYR+ LL++++V C L I++ E+++ +L+ET+G + ++
Sbjct: 650 FMGYLYRNQLLSTKIVQTCTFELFNSIKDQDIKKEDVDEESIHCGLQLIETVGVMLDKSK 709
Query: 860 IQVTAEAVIEGSSLLDTLFDQIKNVIENGDISSRIKFKLIDIVELREKRNWNSKNKNDGP 919
T LD F +++ S++I+F +++++ELR+ + K+ GP
Sbjct: 710 DSTTV--------FLDQWFQKLE--AAKPYCSNKIRFMIMNLMELRKDKWIPRKSTESGP 759
Query: 920 KTIAQI 925
K I +I
Sbjct: 760 KKIDEI 765
>7301059 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 1905
Score = 81.3 bits (199), Expect = 7e-15
Identities = 84/308 (27%), Positives = 136/308 (43%), Gaps = 67/308 (21%)
Query: 635 NRWVPKSKMKKTEVKLAPDGTELYDAEEASRKMKSLLNKLTLEMFEPISDDI--MKIANQ 692
N W P + + V +A E D E +K++ +LNKLT + FE + ++ +K+ N+
Sbjct: 1081 NAWQPGTLRR---VSMAGGQDEDDDVEGVLKKVRGILNKLTPDNFEVLLKEMSSIKMDNE 1137
Query: 693 SRWEEKGETLKIVIQQIFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDSETPDKTGSHLV 752
++ V+ IF K EP+++ YA+ C K L IK T S
Sbjct: 1138 AKMTN-------VMLLIFEKTISEPNFAPTYARFC----KVLFHEIKAENKSLFTSS--- 1183
Query: 753 LHYLVQRCQTEFQTGWTDQLPTNEDGTPLQPEM------------------MSDEYYKMA 794
L+ R Q EF++ D N LQP M M D Y+
Sbjct: 1184 ---LITRIQHEFESNVND---ANAKSKKLQPTMERINQCSDPAKKAELRAEMEDLEYQF- 1236
Query: 795 AAKRRGLGLVRFIGFLYRSNLLTSRMVFFCFKRLMKDIQNSPTEDTLESVCELLETIGEQ 854
+RR G VRFIG L++ LT+ V C + L++ E+ LE +C+LL T+G
Sbjct: 1237 --RRRAWGTVRFIGELFKLQSLTNDRVLNCVESLLE----HGCEEKLEYMCKLLTTVGHL 1290
Query: 855 FEGARIQVTAEAVIEGSSLLDTLFDQIKNVIENG-----------DISSRIKFKLIDIVE 903
E + + ++ +F +I+++I ISSR++F + D+++
Sbjct: 1291 LES-----SLPEHYQLRDRIEKIFRRIQDIINRSRGTSHRQQVHIKISSRVRFMMQDVLD 1345
Query: 904 LREKRNWN 911
LR RNW+
Sbjct: 1346 LR-LRNWD 1352
>7303385 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 869
Score = 72.8 bits (177), Expect = 3e-12
Identities = 57/206 (27%), Positives = 103/206 (49%), Gaps = 17/206 (8%)
Query: 722 MYAQLCGKVVKDLDDSIKDSETPDKTGSHLVLHYLVQRCQTEFQTGWTDQLPTNEDGTPL 781
MYAQLC ++ ++ K+ + S L L+ C+ +F ++L +E+
Sbjct: 1 MYAQLCKRLSEEAPSFDKEP-----SNSSTFLRLLIAVCRDKFN----NRLKRDENDNRP 51
Query: 782 QPEMMSDEYYKMAAAKRRGLGLVRFIGFLYRSNLLTSRMVFFCFKRLMKDIQNSPTEDTL 841
PE +DE + AK+R LG V+FIG L + ++L+ ++ C L D + T T
Sbjct: 52 PPENEADEEERRHLAKQRMLGNVKFIGELNKLDMLSKNVLHQCIMELF-DKKKKRTAGTQ 110
Query: 842 ESVCELLETIGEQFEGARIQVTAEAVIEGSSLLDTLFDQIKNVIENGDISSRIKFKLIDI 901
E +CE +E + + + + +E +G L++ F++++ ++ + RI+F L D+
Sbjct: 111 E-MCEDMECLAQLLKTCGKNLDSE---QGKELMNQYFEKLERRSKSSEYPPRIRFMLKDV 166
Query: 902 VELREKRNW--NSKNKNDGPKTIAQI 925
+ELR+ NW +GP I QI
Sbjct: 167 IELRQ-NNWVPRKLGTTEGPVPIKQI 191
>At1g62410 [J] KOG0401 Translation initiation factor 4F ribosome/mRNA-bridging
subunit (eIF-4G)
Length = 223
Score = 58.9 bits (141), Expect = 4e-08
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 709 IFNKACDEPHWSSMYAQLCGKVVKDLDDSIKDSETPDKTGSHLVLHYLVQRCQTEFQTGW 768
IF+KA EP + MYAQLC + + + + KT L+ CQ F+
Sbjct: 17 IFDKAVLEPTFCPMYAQLCFDIRHKMP---RFPPSAPKTDEISFKRVLLNTCQKVFER-- 71
Query: 769 TDQLPTNEDGTPLQPEMMSDEYYKMAAAKRRGLGLVRFIGFLYRSNLLTSRMVFFCFKRL 828
TD L + E P+ ++ ++ R LG +RF G L+ +LT ++V ++L
Sbjct: 72 TDDL-SEEIRKMNAPDQEAEREDEVRLLNLRTLGNLRFCGELFLKRMLTEKVVLAIGQKL 130
Query: 829 MKDI-QNSPTEDTLESVCELLETIGEQFEGARIQVTAEAVIEGSSLLDTLFDQIKNVIEN 887
++D Q P+E+ + ++C L T+G++ + S L++ + ++KN+ +
Sbjct: 131 LEDAEQMCPSEEKIIAICLFLNTVGKKLDSL-----------NSKLMNEILRRLKNLSNH 179
Query: 888 GDISSRIKFKLIDIVEL 904
+ ++ + I+ L
Sbjct: 180 PQLVMSLRLMVGKIIHL 196
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.310 0.130 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,001,005
Number of Sequences: 60738
Number of extensions: 1525136
Number of successful extensions: 3573
Number of sequences better than 1.0e-05: 14
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3515
Number of HSP's gapped (non-prelim): 24
length of query: 1021
length of database: 30,389,216
effective HSP length: 116
effective length of query: 905
effective length of database: 23,343,608
effective search space: 21125965240
effective search space used: 21125965240
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)