ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI1268 suspect: LH YU KOG2022 Intracellular trafficking, secretion, and vesicular transport Nuclear transport receptor LGL2 (importin beta superfamily)
r_klactI1268 suspect: LH YU KOG2022 Nuclear structure Nuclear transport receptor LGL2 (importin beta superfamily)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI1268 433581 436757 1059
(1059 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL016w [YU] KOG2022 Nuclear transport receptor LGL2 (importin b... 905 0.0
>YGL016w [YU] KOG2022 Nuclear transport receptor LGL2 (importin beta
superfamily)
Length = 1081
Score = 905 bits (2339), Expect = 0.0
Identities = 474/1094 (43%), Positives = 706/1094 (64%), Gaps = 54/1094 (4%)
Query: 3 INHIVSLIETFNNSHDSKVINDIQNVLQQHQKSELGIDLANALLSQENGSTNVKYFGALT 62
I+ +V+LIE + H +N IQ LQ QKSE G LAN LLS + S NVKYFGALT
Sbjct: 4 IHEVVALIEELYSPHPKHDVNQIQQSLQSIQKSEQGFHLANELLSDDKYSANVKYFGALT 63
Query: 63 YTVQLTTCLHTESQ-LWSIFQGNLVHLTRMMFLFTSNPAAASNLLVTITKLMSNLSLIFL 121
TVQL T + + LW++F+ NL++LT+ L+ SNP L+ I KLMSNLSLIF
Sbjct: 64 LTVQLNTRGENDYETLWNVFRSNLLYLTKFSTLYVSNPNMYGQSLIIIKKLMSNLSLIFT 123
Query: 122 TINSDAIG--ADSNKIPAWRNPVNTCIKLLQHCNESNLFEWRTDNSEIAERLVRTCLNED 179
IN + + N I W NP+NT I+L+ N++ A++L+ +N
Sbjct: 124 KINDPQLNNAGNENMIKQWNNPINTFIQLMSVQNQNIN----------ADQLLLDSINCS 173
Query: 180 VPYTELIGNISSSAPLNKLLLLFTKVIVEDMNKYQSKKSSLSNVYEMVHNHLYISTMAIL 239
+ Y +L +S S N+L L FT+VIVED+ K+Q+K+ S+S ++E+VH HLYISTMA++
Sbjct: 174 LTYEQLSQFVSLSQKHNELALTFTEVIVEDLTKFQTKRHSMSQIHEVVHEHLYISTMALI 233
Query: 240 NFNLENMMSSGATSEVFPCITSWIHYISMARNVSAHGTMDLTEMFNNMINVMCMASNGSQ 299
N NL T VF CIT+WI+YIS+ R+VS+ G MDL+E+F N+I++M ++ GS
Sbjct: 234 NLNLTAQAVFNPT--VFDCITAWINYISLTRSVSSSGRMDLSEIFQNLIDLMYQSTEGSD 291
Query: 300 EFPYSDEVISIFDDLFSNDPTLMSFEVRAKLEAIFLGVSRHS-----MNTSNDWMLAYMN 354
+ ++++++IF ++F+NDP LMS+++R ++E IFLGV R ++ N WML YMN
Sbjct: 292 GYENAEKILTIFGNVFANDPLLMSYDLRQQIECIFLGVVRPDSGITDISNKNSWMLQYMN 351
Query: 355 HLVTNELYDDLKVLASCVVDFLQISNLDVCNKLFTNIHE----NTGDQSLEDYIRVLLQL 410
+LVTN+ + +LK LA C+VDFLQI+ L VCNKLFTNI D+ +++YI+VLLQ+
Sbjct: 352 YLVTNDFFSELKELAICIVDFLQINTLSVCNKLFTNIQAADNGQVQDEYIQEYIKVLLQM 411
Query: 411 TNFPLIPILQETYSSKMIEFWLDLAEGYGNLPQEALKADANEIAENMFNQVVQIYLPKIS 470
TNFPL P+LQE +S +M++FWLDL++ Y NL E L+ ++ E++ +F Q++ IYLPKIS
Sbjct: 412 TNFPLTPVLQEFFSVRMVDFWLDLSDAYTNLASETLRPNSIELSTQIFQQLINIYLPKIS 471
Query: 471 LMNKQKIMEEDDDQSLLHEFDDFRSATQDLMEILWTILGHSKLTIVLIRGVGQADTNNVD 530
L KQ+I+EE+ + + ++EF+DFR+A DL + LW+ILG+ LT VLI G+GQ + +
Sbjct: 472 LSVKQRIIEEEGESTSVNEFEDFRNAVSDLAQSLWSILGNDNLTNVLIDGMGQMPAASDE 531
Query: 531 ---------LYQVEAMSFLLAKLLDGVNFSQSPFISDAIGENHLID-NLLFLLQTGCKQK 580
L+++E M F+L +L + S+SP+I + + N + N++ + QTG +
Sbjct: 532 TLIIKDTDVLFRIETMCFVLNTILVDMTLSESPWIKNIVDANKFFNQNVISVFQTGFQTS 591
Query: 581 EHSKTAQVLKLDFVKATCNLLGVMATYFHVDSKPLGPIVESLFECLETSRQYNPIEY--- 637
+K +Q+LKLDFV+ + L+G +A YF + L P VE+LF+ L T +
Sbjct: 592 ASTKVSQILKLDFVRTSTTLIGTLAGYFKQEPFQLNPYVEALFQGLHTCTNFTSKNEQEK 651
Query: 638 --SIKMELQLNRTISLICENCRKELIPFLPNFIQVLRSIMRPESPVSHFTREKFVKSIGN 695
+ K+E+ + +T+S +CE CR+EL P+L +FI L +++ P+S VSHFTR K V+SIG
Sbjct: 652 ISNDKLEVMVIKTVSTLCETCREELTPYLMHFISFLNTVIMPDSNVSHFTRTKLVRSIGY 711
Query: 696 IIQMCVSEGPEAQANHISNMVDMIGGLIQTTDAKSDMLS--------LLACLSELGSGLS 747
++Q VS GPE QA +I + +++ G I+ A S L LL C+SEL + L
Sbjct: 712 VVQCQVSNGPEEQAKYILQLTNLLSGSIEHCLASSVQLQEQQDYINCLLYCISELATSLI 771
Query: 748 QLPNDDEFIENNPMYLAQLPAFQAYWLQDPMRVKDKVMHLVQYAL--SKYGTDPEFVEVS 805
Q E IEN+ + L +L FQ++W DP++++ K+M + L S Y + FVE+
Sbjct: 772 Q---PTEIIENDAL-LQRLSEFQSFWSSDPLQIRSKIMCTIDKVLDNSIYCKNSAFVEIG 827
Query: 806 CLIIGKAITLPDDIPHFLRYPLSEMMSFYMTCISNCDYASGLPYIEYQLEKIVAGFKDQL 865
CLI+GK + LPD P+FL+Y +SE+M+F + + NC+ A+ LPY Y LEK+++ F+ +L
Sbjct: 828 CLIVGKGLNLPDGEPYFLKYNMSEVMNFVLRHVPNCELATCLPYFVYLLEKLISEFRKEL 887
Query: 866 TSHEFDEMFKQFFLNYYSSHISSDPDLIQSMVSWVNSVLEAKPSLALKSEYWTQFIVPEF 925
T EFD MF++ L YY ++I +DPDL+Q + +VN+VL+ KP LA+ S++WT FI+P+F
Sbjct: 888 TPQEFDFMFEKILLVYYDAYIINDPDLLQMTIGFVNNVLDVKPGLAIGSKHWTSFILPQF 947
Query: 926 LKYLQAKEKFTISSTTKFWMKTLNNRRYTQEDTEIINALFQSMGKQLVYQTMFSLHHAQR 985
LK + ++EKFTI + KFW K +NN++Y QE+ + S+G LVYQ M+ L H QR
Sbjct: 948 LKLIPSREKFTIVAVAKFWTKLINNKKYNQEELTTVRQQVSSIGGDLVYQIMYGLFHTQR 1007
Query: 986 SDVPQYAELIRTLFAKYPMPMKDWLYELLPQITGKEAIFHERFINKLTVTRASRATLSTV 1045
SD+ Y +L+R L AK+P+ ++WL +LPQI A HE+FINKL +TR SRA + +
Sbjct: 1008 SDLNSYTDLLRALVAKFPIEAREWLVAVLPQICNNPA-GHEKFINKLLITRGSRAAGNVI 1066
Query: 1046 TEWWLDCNGLPNLQ 1059
+WWLDC LPN Q
Sbjct: 1067 LQWWLDCTTLPNYQ 1080
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,113,591
Number of Sequences: 60738
Number of extensions: 2564351
Number of successful extensions: 7227
Number of sequences better than 1.0e-05: 1
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7214
Number of HSP's gapped (non-prelim): 1
length of query: 1059
length of database: 30,389,216
effective HSP length: 117
effective length of query: 942
effective length of database: 23,282,870
effective search space: 21932463540
effective search space used: 21932463540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)