ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI1406 check: MH L KOG1805 Replication, recombination and repair DNA replication helicase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI1406 478337 482671 1445
(1445 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHR164c [L] KOG1805 DNA replication helicase 789 0.0
SPBC16D10.04c [L] KOG1805 DNA replication helicase 434 e-121
At1g08840 [L] KOG1805 DNA replication helicase 387 e-107
Hs20470741 [L] KOG1805 DNA replication helicase 372 e-102
CE23725 [L] KOG1805 DNA replication helicase 291 5e-78
CE02219 [L] KOG1805 DNA replication helicase 291 5e-78
7291108 [L] KOG1805 DNA replication helicase 250 1e-65
At5g35970 [L] KOG1803 DNA helicase 151 6e-36
At2g03270 [L] KOG1803 DNA helicase 149 4e-35
SPCC737.07c [L] KOG1803 DNA helicase 136 2e-31
YKL017c [L] KOG1803 DNA helicase 135 6e-31
YMR080c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 132 3e-30
Hs18375673 [A] KOG1802 RNA helicase nonsense mRNA reducing facto... 130 1e-29
Hs4504623 [L] KOG1803 DNA helicase 129 4e-29
At5g47010 [A] KOG1802 RNA helicase nonsense mRNA reducing factor... 126 3e-28
ECU09g1800 [L] KOG1805 DNA replication helicase 125 5e-28
SPAC16C9.06c [A] KOG1802 RNA helicase nonsense mRNA reducing fac... 122 3e-27
ECU10g1640 [A] KOG1802 RNA helicase nonsense mRNA reducing facto... 120 1e-26
CE28367 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 116 2e-25
CE19303 [L] KOG1803 DNA helicase 109 3e-23
CE08664 [L] KOG1803 DNA helicase 105 7e-22
Hs14251207_2 [A] KOG1804 RNA helicase 105 7e-22
At1g05460 [A] KOG1804 RNA helicase 104 9e-22
ECU05g1110 [L] KOG1803 DNA helicase 99 5e-20
SPBC29A10.10c [A] KOG1801 tRNA-splicing endonuclease positive ef... 94 2e-18
Hs7662212 [A] KOG1801 tRNA-splicing endonuclease positive effect... 90 2e-17
SPAC6G9.10c [A] KOG1801 tRNA-splicing endonuclease positive effe... 89 7e-17
YLR430w [A] KOG1801 tRNA-splicing endonuclease positive effector... 86 4e-16
7292369_2 [A] KOG1804 RNA helicase 85 1e-15
7302834 [A] KOG1804 RNA helicase 84 2e-15
At1g16800 [A] KOG1801 tRNA-splicing endonuclease positive effect... 77 2e-13
Hs14211540 [A] KOG1804 RNA helicase 76 4e-13
7303245 [A] KOG1804 RNA helicase 76 4e-13
Hs7661884 [A] KOG1804 RNA helicase 75 8e-13
CE05420 [A] KOG1801 tRNA-splicing endonuclease positive effector... 75 8e-13
At1g65780 [A] KOG1801 tRNA-splicing endonuclease positive effect... 75 8e-13
At5g37150 [A] KOG1801 tRNA-splicing endonuclease positive effect... 75 1e-12
At5g52090 [A] KOG1801 tRNA-splicing endonuclease positive effect... 72 5e-12
At4g05540 [A] KOG1801 tRNA-splicing endonuclease positive effect... 70 2e-11
7295157 [A] KOG1801 tRNA-splicing endonuclease positive effector... 66 5e-10
CE27795 [A] KOG1801 tRNA-splicing endonuclease positive effector... 65 1e-09
CE01466 [A] KOG1801 tRNA-splicing endonuclease positive effector... 65 1e-09
At5g37030 [A] KOG1801 tRNA-splicing endonuclease positive effect... 63 3e-09
Hs21703358_3 [A] KOG1804 RNA helicase 63 4e-09
Hs14769950_3 [A] KOG1804 RNA helicase 63 4e-09
CE07357 [A] KOG1801 tRNA-splicing endonuclease positive effector... 61 1e-08
At4g15570 [A] KOG1801 tRNA-splicing endonuclease positive effect... 61 1e-08
CE18803 [L] KOG1803 DNA helicase 60 3e-08
7301121 [L] KOG1807 Helicases 55 1e-06
>YHR164c [L] KOG1805 DNA replication helicase
Length = 1522
Score = 789 bits (2037), Expect = 0.0
Identities = 533/1527 (34%), Positives = 808/1527 (52%), Gaps = 142/1527 (9%)
Query: 1 MVSTPKK-KRTASVSISPFKKDTDAISVDYXXXXXXXXXXX----YHFAPLNRLS----- 50
M TP+K KR+AS+S+SP KK + + Y FAP+N L+
Sbjct: 1 MPGTPQKNKRSASISVSPAKKTEEKEIIQNDSKAILSKQTKRKKKYAFAPINNLNGKNTK 60
Query: 51 -SEEPILKSIPISRVRNVEAGSSVKDTVNAKTSGKTKLASKRIINSTKTRREKSTEAVPE 109
S +LKSI +S+VRN S KD A + +L + ++ K +RE S +
Sbjct: 61 VSNASVLKSIAVSQVRNT---SRTKDINKAVSKSVKQLPNSQV----KPKREMSNLSRHH 113
Query: 110 --TRYSDGPSEEVIWRYSPRKIDEQLCNHYNTGNDDNNSDELSQDMPLGQ--SSTPLIND 165
T+ DGP EEVIW+YSP + D + ++ E S D Q SSTP++ +
Sbjct: 114 DFTQDEDGPMEEVIWKYSPLQRD--------MSDKTTSAAEYSDDYEDVQNPSSTPIVPN 165
Query: 166 KFKDVIDFENMD-PNS-----IDKECRKIAQGSPVKRGEKDVTPMRDIHEILNDLEGPKL 219
+ K V+ F N+ PN+ I + + + P + ++ +R+I +IL+D+EG
Sbjct: 166 RLKTVLSFTNIQVPNADVNQLIQENGNEQVRPKPAEISTRE--SLRNIDDILDDIEGDLT 223
Query: 220 LPPS----SPICSEPVVIDDDPVENLPELASESISNHKHT--TTNGIERTFTMYPPQINX 273
+ P+ S + S P+ + VE E+ +E + T + +G + + +
Sbjct: 224 IKPTITKFSDLPSSPIKAPN--VEKKAEVNAEEVDKMDSTGDSNDGDDSLIDILTQKYVE 281
Query: 274 XXXXXXXXXXXXXXTQRFTKPVITECNXXXXXXXXXXXXXXXXXKPAT-------LPQLQ 326
Q+ N + T
Sbjct: 282 KRKSESQITIQGNTNQKSGAQESCGKNDNTKSRGEIEDHENVDNQAKTGNAFYENEEDSN 341
Query: 327 VRKIERIE-VMLESEDENVEDSVKS--NENQTD---HLLNNKADVVER------------ 368
++I++ E + S DE +DS+ NE QT + + D VE+
Sbjct: 342 CQRIKKNEKIEYNSSDEFSDDSLIELLNETQTQVEPNTIEQDLDKVEKMVSDDLRIATDS 401
Query: 369 ----YVNLAKFPFPQRGCQRLCIFEIKEMKSP---AQIILTCFNQDAGKVNLILRDPWIR 421
Y AK P+ G RL I ++ ++ P Q IL C + + ++++R PW+
Sbjct: 402 TLSAYALRAKSGAPRDGVVRLVIVSLRSVELPKIGTQKILECIDGKGEQSSVVVRHPWVY 461
Query: 422 FRYEQGMIIHLIEGDHFPNKRLLSNDKDPKTGLENDNLLIVYPDVLLSATAIGTAMDCER 481
+E G +IH+IEG + NKRLLS+DK+PKT L NDNLL++ PDVL SAT++G+++ C R
Sbjct: 462 LEFEVGDVIHIIEGKNIENKRLLSDDKNPKTQLANDNLLVLNPDVLFSATSVGSSVGCLR 521
Query: 482 RAVLSSKFNEP-GEYSLAAVLGNIIHAXXXXXXXXXXXXPNQFLSKGLALEILDKVIKPF 540
R++L +F +P GE SL LGNI+H + +S + ++ LD +++ +
Sbjct: 522 RSILQMQFQDPRGEPSLVMTLGNIVHELLQDSIKYKLS--HNKISMEIIIQKLDSLLETY 579
Query: 541 TTEVNMCGESVESVIKTISDEHLPFIIEFVNIYVTKDNSRSWIQVIGTKNKRKLSVSQIV 600
+ + +C E ++ V + + EH I+ FVN +V+K N + + GT+ + +S+S ++
Sbjct: 580 SFSIIICNEEIQYVKELVMKEHAENILYFVNKFVSKSNYGCYTSISGTRRTQPISISNVI 639
Query: 601 DIEENIWSSKYGLKGYIDVTVETNVDSDGKKLLAPVEIKTGKWKSNAHEAQGLIYTLLLQ 660
DIEENIWS YGLKG++D TVE NV+++ KK + P+E+KTGK +S ++E QGLIYTLLL
Sbjct: 640 DIEENIWSPIYGLKGFLDATVEANVENN-KKHIVPLEVKTGKSRSVSYEVQGLIYTLLLN 698
Query: 661 DRYDIPVNLHMMLYTKLREFSLQPKILISLKHLLNLRNKLATYLQVMNEEMSDWGGPQHE 720
DRY+IP+ ++ +T+ + + P +L S+KH+L RN+++ + +E+ + E
Sbjct: 699 DRYEIPIEFFLLYFTRDKNMTKFPSVLHSIKHILMSRNRMSMNFKHQLQEVFGQAQSRFE 758
Query: 721 LPAMIQNSKCDQCFMKTSCMVLNKLSDKEQTP---GLLKHEYTDLTRHLEAQGSQVLELF 777
LP ++++S CD CF+K SCMVLNKL + + TP GL++ E+ LT HL SQ L +
Sbjct: 759 LPPLLRDSSCDSCFIKESCMVLNKLLE-DGTPEESGLVEGEFEILTNHL----SQNLANY 813
Query: 778 RSFYGKYDRLLMMEETSITSVTKDTFLMSGTDREAQTGHCISQLTIKNV--QDQGNGRYL 835
+ F+ KY+ L+ EE+SIT V K+ FL+ G+ RE+++G C+S L + V ++ G Y+
Sbjct: 814 KEFFTKYNDLITKEESSITCVNKELFLLDGSTRESRSGRCLSGLVVSEVVEHEKTEGAYI 873
Query: 836 YTFCRENDIQGSFATSNAEQQETKKLKSAPPSMLSSDIHKGDYIMISNDTSGQLAIGTGH 895
Y F R + S SMLSS I D+++IS D G + G
Sbjct: 874 YCFSRRRNDNNS------------------QSMLSSQIAANDFVIIS-DEEGHFCLCQGR 914
Query: 896 VSEIANDFIVINCARNILANNIHGDSFDRNTRQVVRSVLLKQKEPLNEKQSLTNSHRYRI 955
V I I I+ R +L N + T Q V L+Q + + +T YRI
Sbjct: 915 VQFINPAKIGISVKRKLLNNRLLDKEKGVTTIQSVVESELEQSSLIATQNLVT----YRI 970
Query: 956 DKNESATGLTLARYNLLNLFLPEVLIEAEFSPQKSGEKLQLPVKXXXXXXXXXXXXIVEL 1015
DKN+ L+LAR+NLL+LFLP V + ++S KL K +V+
Sbjct: 971 DKNDIQQSLSLARFNLLSLFLPAVSPGVDIVDERS--KLCRKTKRSDGGNEILRSLLVDN 1028
Query: 1016 SEPKW--TTHAARIP---TLNDSFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELV 1070
PK+ IP + + + N NQK AI++ + DY LILGMPGTGKT+VI E++
Sbjct: 1029 RAPKFRDANDDPVIPYKLSKDTTLNLNQKEAIDKVMRAEDYALILGMPGTGKTTVIAEII 1088
Query: 1071 SILVNQGKSVMVTSYTNSAVDNIIMKLTSRIPRSKMVRLGSGRRVHDLVKPYCIT-EMLD 1129
ILV++GK V++TSYT+SAVDNI++KL R ++RLG +VH + Y +
Sbjct: 1089 KILVSEGKRVLLTSYTHSAVDNILIKL--RNTNISIMRLGMKHKVHPDTQKYVPNYASVK 1146
Query: 1130 GDNENLSEIIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYK 1189
N+ LS+ I++ VV TCLGIND + DFDYVILDEASQ+S+PVA+GPLR+G +
Sbjct: 1147 SYNDYLSK-INSTSVVATTCLGINDILFTLNEKDFDYVILDEASQISMPVALGPLRYGNR 1205
Query: 1190 FILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVL 1249
FI+VGDHYQLPPLVKN AR GL+ESLF+ C HP+SV EL LQYRM +I++LSN L
Sbjct: 1206 FIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPESVAELTLQYRMCGDIVTLSNFL 1265
Query: 1250 IYGGKLQCGTDEIRRQVLQFP--------NNYKCSQDTWLQKAINPEQPVVILDHDGFQS 1301
IY KL+CG +E+ Q L+ P N + WL+ + P + VV L++D
Sbjct: 1266 IYDNKLKCGNNEVFAQSLELPMPEALSRYRNESANSKQWLEDILEPTRKVVFLNYD---- 1321
Query: 1302 TSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLED 1361
+ +EQ++ ++ +L G+ + IGVM++Y+AQ+ LLK
Sbjct: 1322 -NCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLKKIFNK 1380
Query: 1362 L---DIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRINVAVSRAXXXXXXXX 1418
+++LTADQFQGRDK CIIISMVR N G LL++LRR+NVA++RA
Sbjct: 1381 NVYDGLEILTADQFQGRDKKCIIISMVRRNSQLNGGALLKELRRVNVAMTRAKSKLIIIG 1440
Query: 1419 XXXXXXXXHPLKPFVDHVARNNWITKM 1445
+K FV+ + NW+ M
Sbjct: 1441 SKSTIGSVPEIKSFVNLLEERNWVYTM 1467
>SPBC16D10.04c [L] KOG1805 DNA replication helicase
Length = 1398
Score = 434 bits (1116), Expect = e-121
Identities = 323/1023 (31%), Positives = 481/1023 (46%), Gaps = 127/1023 (12%)
Query: 447 DKDPKTGLENDN-LLIVYPDVLLSATAIGTAMDCERRAVLSSKFNEPGEYSLAAVLGNII 505
DKD ++ND L+I++P +L+SATA+ ++ C R+AV+S + G + A V GNI+
Sbjct: 418 DKDNTAIVDNDKGLIIIHPKILMSATAVASSFPCLRKAVISDRVGIYGPPTKAMVTGNIL 477
Query: 506 HAXXXXXXXXXXXXPNQFLSKGL-ALEILD----KVIKPFTTEVNMCGESVESVIKTISD 560
H L +G+ ALE +D IK + +++ S++ + + + D
Sbjct: 478 HDFFQHA-----------LYRGIDALENVDINLETSIKTYISDIYFADLSLDEIREEL-D 525
Query: 561 EHLPFIIEFVNIY-VTKDNSRSWIQVIGTKNKRKLSVSQIVDIEENIWSSKYGLKGYIDV 619
LP + V Y ++K N N + +S+++DIEE+IWS ++GLKG ID
Sbjct: 526 ARLPLLKSIVERYLISKKNDN---------NNESIHISRLLDIEESIWSPRFGLKGNIDA 576
Query: 620 TVE---TNVDSDGKKLLAPVEIKTGKWKSN-AHEAQGLIYTLLLQDRYDIPVNLHMMLYT 675
TVE T L P+E+KTG++ N +H AQ L+YTLL+ DRY I N ++ Y
Sbjct: 577 TVEVVLTEKPESSSTLTLPLELKTGRYVDNISHFAQSLLYTLLISDRYGINTNQALLCYL 636
Query: 676 KLREFSLQPKILISLKHLLNLRNKLATYLQVMNEEMSDWGGPQHELPAMIQNSK-CDQCF 734
+ L+ L+ RN LA + + LP MI N K CD C
Sbjct: 637 ENSTIKNLVASNSQLRGLIMTRNSLAQH------------NFRRSLPEMISNRKICDHCS 684
Query: 735 MKTSCMVLNKLSDKEQTPGLLKHEYTDLTRHLEAQGSQVLELFRSFYGKYDRLLMMEETS 794
+ + C+ K+SDK LT +V + FY K+++LL EE
Sbjct: 685 LVSECLFFQKMSDKGVANS------NGLTESWNEWMREVKDEDLEFYKKWEKLLNQEERL 738
Query: 795 ITSVTKDTFLMSGTDREAQTGHCISQLTIKNVQ------DQGNGRYLYTFCRENDIQGSF 848
+ D + EA G + L I D Y + F +N
Sbjct: 739 LLLKRGDVLTFDTEELEAY-GKTLYPLYITKEDIVCLEIDDRVFHYKFAFLNDNGY---- 793
Query: 849 ATSNAEQQETKKLKSAPPSMLSSDIHKGDYIMISNDTSGQLAIGTGHVSEIANDFIVINC 908
P + L S G+ + IS D G ++ GH+ I + I +
Sbjct: 794 ----------------PRNFLHSGFSVGERVFIS-DEHGHWSLAKGHIVHIQDSCIEVRT 836
Query: 909 ARNILANNIHGDSFDRNTRQVVRSVLLKQKEPLNEKQSLTNSHRYRIDKNESATGLTLAR 968
+ + +FD QV E +N RYRIDK+E ++G+ R
Sbjct: 837 RHRLHIPWLKMPNFDFKKNQV----FFGNYEDSKLSFIGSNHTRYRIDKDEFSSGIASIR 892
Query: 969 YNLLNLFLPEVLIEAEFSPQKSGEKLQLPVKXXXXXXXXXXXXIVELSEPKWTTHAARIP 1028
L++ LP+ + I+ L PK+ A P
Sbjct: 893 GTLMSSVLPDAPL-------------------------IIRDMIIRLKPPKFCNSALIDP 927
Query: 1029 TLNDSFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVNQGKSVMVTSYTNS 1088
NE+Q A+++ Y+LILGMPGTGKT+ I L+ L+ + K +++TS+T+
Sbjct: 928 EFLKCLNEDQITALKKCHAAEHYSLILGMPGTGKTTTISSLIRSLLAKKKKILLTSFTHL 987
Query: 1089 AVDNIIMKLTSRIPRSKMVRLGSGRRVHDLVKPYCITEMLDGDN-ENLSEIIDAAQVVGV 1147
AVDNI++KL S +VRLGS ++H LVK +C+TE D+ +L + Q+V
Sbjct: 988 AVDNILIKLKGC--DSTIVRLGSPHKIHPLVKEFCLTEGTTFDDLASLKHFYEDPQIVAC 1045
Query: 1148 TCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYKFILVGDHYQLPPLVKNSF 1207
+ LG+ R FDY I+DEASQ+ LP+ +GPL+ KF+LVGDHYQLPPLVKNS
Sbjct: 1046 SSLGVYHSIFNKRK--FDYCIIDEASQIPLPICLGPLQLAEKFVLVGDHYQLPPLVKNSR 1103
Query: 1208 ARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVL 1267
+GL SLF+ L HP++V L+LQYRMN +I SLS+ LIYGG L CG+ I ++ L
Sbjct: 1104 TSKDGLSLSLFKLLSEKHPEAVTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTISQKKL 1163
Query: 1268 QFPNNY-------KCSQDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQLSXXX 1320
P + S W+ K INP V+ F +T + VE + L
Sbjct: 1164 ILPKAHLSDGLPDSSSSLHWVNKLINPSHSVI------FFNTDDILGVESKTNNILENHT 1217
Query: 1321 XXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLEDL-DIDVLTADQFQGRDKDC 1379
L G++ IG++S+YK+Q+ LL L+ +I++ T D++QGRDKD
Sbjct: 1218 EAFLIEQAVSSFLERGVKQSSIGIISIYKSQVELLSKNLKSFTEIEINTVDRYQGRDKDI 1277
Query: 1380 IIISMVRSNPDQASGVLLRDLRRINVAVSRAXXXXXXXXXXXXXXXXHPLKPFVDHVARN 1439
I+IS VRSN G LLRD R+NVA+SRA + + + + +N
Sbjct: 1278 ILISFVRSNSKNLVGELLRDWHRLNVALSRAKVKCIMFGSLSTLSSSNIVSHLLKLLEKN 1337
Query: 1440 NWI 1442
WI
Sbjct: 1338 KWI 1340
>At1g08840 [L] KOG1805 DNA replication helicase
Length = 1296
Score = 387 bits (993), Expect = e-107
Identities = 317/1120 (28%), Positives = 531/1120 (47%), Gaps = 157/1120 (14%)
Query: 330 IERIEVMLESEDENVEDS--VKSNENQTDHLLNNKAD--VVERYVNLAKFPFPQRGCQRL 385
++++E ++ +D+ +D V D ++++ D V E V+L K
Sbjct: 253 LDQVEDVIAVDDKTTDDVGIVMPQARVKDDIISSVVDCAVDEGPVSLPKMQNSINPDSYF 312
Query: 386 CIFEIKEMKS---------PAQIILTCFNQDAGKVNLILRDPWIRFRYEQGMIIHLIEGD 436
+ E+ E + P +++ + L L D W G I++I G+
Sbjct: 313 LVLEVSEKRGSGSSSKGQCPYKVLRLLDEHTGVECALYLWDEWFYSTVSPGDSINVI-GE 371
Query: 437 HFPNKRLLSNDKDPKTGLEN-DNLLIVYPDVLLSATAIGTAMDCERRAVLSSKFNEPGEY 495
D D K ++ +N LIV+PD L++ T + + C RR VL + E+
Sbjct: 372 F---------DGDGKCDVDRQNNFLIVHPDTLVAGTRVAASFGCPRRTVLDERLRS-NEH 421
Query: 496 SLAAVLGNIIHAXXXXXXXXXXXXPNQFLSKGLALEILDKVIKPFTTEVNMCGESVESVI 555
+ A+LG + H + GL E VI+ + CG V
Sbjct: 422 ATVALLGTLQHQVFQAGLSQESPSVD-----GLQ-EYASTVIEKSIESLYACGVHEGDVR 475
Query: 556 KTISDEHLPFIIEFVNIY-VTKDNSRSWIQVIGTKNKRKLSVSQIVDIEENIWSSKYGLK 614
T+ + +P ++ ++ + +KD+ S + T K+ + VS+++DIEE W+ KYGLK
Sbjct: 476 STLF-KAIPKMLNWIEHFRYSKDSEVSKVDFGSTIGKKAVKVSEVIDIEEMSWAPKYGLK 534
Query: 615 GYIDVTVETNVDSDGKKL---LAPVEIKTGKWKSNA----HEAQGLIYTLLLQDRYDIPV 667
G ID +V V+SD + + P+E K+GK S H AQ ++YTLL+ +RY +
Sbjct: 535 GMIDASVRVIVESDMNTVNEKIMPLEFKSGKAPSGQSSIEHSAQVILYTLLMSERYLKHI 594
Query: 668 NLHMMLYTKLRE---FSLQPKILISLKHLLNLRNKLATYLQVMNEEMSDWGGPQHELPAM 724
+ ++ Y + + S+Q L+ L + RN+LA + V + +LP M
Sbjct: 595 DNGLLYYLQSDQTQGISVQRSDLVGL---IIRRNELANDILVASTTQ--------QLPPM 643
Query: 725 IQNSKCDQCFMKTSCMVLNKLSDKEQTPGLLKHEYTDLTRHLEAQGSQVLELFRSFYGKY 784
++ +D T E + L + S + L +F +
Sbjct: 644 LR-------------------ADGGNT------ESSGLGDVFDTHVSHLSTLHFNFLRHW 678
Query: 785 DRLLMMEETSITSVTKDTFLMSGTDREAQTGHCISQ-LTIKNVQDQGNG----RYLYTFC 839
DRL+ +E + + KD G+ + S L + N N R++Y F
Sbjct: 679 DRLIDLEGREMQLLRKDIAHPHGSKGSHSASYLSSMVLDVTNGFQHHNSHKETRFIYRFV 738
Query: 840 RENDIQGSFATSNAEQQETKKLKSAPPSMLSSDIHKGDYIMISNDTSGQLAIGTGHVSEI 899
R+ + ++ + T L + L + GD +++ + S L + G +++I
Sbjct: 739 RQKSSESRERVTSEDMIRTGNLATDD---LDCKLRTGDRVILRTEVS-HLTVANGIIADI 794
Query: 900 ANDFIVINCARNILANNIHGDSFDRNTRQVVRSVLLKQKEPLNEKQSLTNSHRYRIDKNE 959
+ I ++ ++ + L EP +E +L++ +RI K+E
Sbjct: 795 SRTHISVSLSKRLR---------------------LPWSEPSSEVSNLSHE-LWRIYKDE 832
Query: 960 SATGLTLARYNLLNLFLPEVLIEAEFSPQKSGEKLQLPVKXXXXXXXXXXXXIVELSEPK 1019
T ++ R+NL+ LF+ ++G ++ IV+L P+
Sbjct: 833 FMTSFSVMRFNLMQLFV------------QNGHNIR--------------KMIVDLEPPR 866
Query: 1020 WTTHA--ARIPTLN-----DSFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSI 1072
+ + ++ P ++ S N +Q+ AI + LT +DY LILGMPGTGKTS + V
Sbjct: 867 FDNGSILSQDPAISYIWSEKSLNNDQRQAILKILTAKDYALILGMPGTGKTSTMVHAVKA 926
Query: 1073 LVNQGKSVMVTSYTNSAVDNIIMKLTSRIPRSKMVRLGSGRRVHDLVKPYCITEMLDGDN 1132
L+ +G S+++ SYTNSAVDN+++KL ++ + +R+G VH+ V+ C + M
Sbjct: 927 LLIRGSSILLASYTNSAVDNLLIKLKAQ--GIEFLRIGRDEAVHEEVRESCFSAMNMCSV 984
Query: 1133 ENLSEIIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYKFIL 1192
E++ + +D +VV TCLGIN P L R FD I+DEA Q++LPV+IGPL F F+L
Sbjct: 985 EDIKKKLDQVKVVASTCLGINSPLLVNRR--FDVCIIDEAGQIALPVSIGPLLFASTFVL 1042
Query: 1193 VGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYG 1252
VGDHYQLPPLV+++ AR+NG+ SLF +L +HPQ++ LQ QYRM IM LSN LIYG
Sbjct: 1043 VGDHYQLPPLVQSTEARENGMGISLFRRLSEAHPQAISVLQNQYRMCRGIMELSNALIYG 1102
Query: 1253 GKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQND 1312
+L CG+ E+ L + S WL+K + P + VV F +T + E D
Sbjct: 1103 DRLCCGSAEVADATLVLSTS--SSTSPWLKKVLEPTRTVV------FVNTDMLRAFEARD 1154
Query: 1313 HGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLEDLDIDVLTADQF 1372
++ L+ +G++ IG+++ Y +Q SL++ + +++ T D++
Sbjct: 1155 QNAINNPVEASIIAEIVEELVNNGVDSKDIGIITPYNSQASLIQHAIPTTPVEIHTIDKY 1214
Query: 1373 QGRDKDCIIISMVRS--NPDQASGVLLRDLRRINVAVSRA 1410
QGRDKDCI++S VRS P ++ LL D RINVA++RA
Sbjct: 1215 QGRDKDCILVSFVRSREKPRSSASSLLGDWHRINVALTRA 1254
>Hs20470741 [L] KOG1805 DNA replication helicase
Length = 1060
Score = 372 bits (955), Expect = e-102
Identities = 311/1100 (28%), Positives = 519/1100 (46%), Gaps = 178/1100 (16%)
Query: 391 KEMKSPAQIILTCFNQDAGKVNLILRDPWIRFRYEQGMIIHLIEGDHFPNKRLLSNDKDP 450
KE ++++T K ILR+ W E G IIHL EGD + ++ D
Sbjct: 58 KEGNCEKRLVITASQSLENKELCILRNDWCSVPVEPGDIIHL-EGDCTSDTWIIDKDF-- 114
Query: 451 KTGLENDNLLIVYPDVLLSATAIGTAMDCERRAVLSSKFNEPGEYSLAAVLGNIIHAXXX 510
LI+YPD+L+S T+I +++ C RRAVLS F + ++G ++H
Sbjct: 115 -------GYLILYPDMLISGTSIASSIRCMRRAVLSETFRSSDPATRQMLIGTVLHEVF- 166
Query: 511 XXXXXXXXXPNQFLSKGLALEILDKVIKPFTTEVNMCGESV-----ESVIKTISDEHLPF 565
+ ++ A E L ++ E+ E + IK +++LP
Sbjct: 167 ----------QKAINNSFAPEKLQELAFQTIQEIRHLKEMYRLNLSQDEIKQEVEDYLPS 216
Query: 566 IIEFVNIYVTKDNSRSWIQV---IGTKNKRKLSVSQI-----VDIEENIWSSKYGLKGYI 617
++ ++ K+ S + Q+ + + N + S I +DIEE+IWS ++GLKG I
Sbjct: 217 FCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIEVVKPMDIEESIWSPRFGLKGKI 276
Query: 618 DVTVETNVDSDGKKL--LAPVEIKTGKWKSNA--HEAQGLIYTLLLQDRYDIPVNLHMML 673
DVTV + K + P+E+KTGK +SN+ H +Q ++YTLL Q+R P ++L
Sbjct: 277 DVTVGVKIHRGYKTKYKIMPLELKTGK-ESNSIEHRSQVVLYTLLSQERRADP-EAGLLL 334
Query: 674 YTKLREFSLQPKILISLKHLLNLRNKLATYL-QVMNEEMSDWGGPQHELPAMIQNSK-CD 731
Y K + P + + LL LRN++A L +++ + LP +I+ K C
Sbjct: 335 YLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRISKSATRQKTQLASLPQIIEEEKTCK 394
Query: 732 QCFMKTSCMVLNKLSDKEQ----TPGLLKHEYTDLTRHLEAQGSQVLELFRSFYGKYDRL 787
C +C + ++ +++ P ++ + + T+HL+ + ++ + +
Sbjct: 395 YCSQIGNCALYSRAVEQQMDCSSVPIVMLPKIEEETQHLK-------QTHLEYFSLWCLM 447
Query: 788 LMMEETSITSVT--KDTFLMSGTDREAQTGHCISQLT-IKNVQDQGNGRYLYTF-CREND 843
L +E S + ++ +LM ++ E ++G CI L +++V+ +G+YL+ F C+
Sbjct: 448 LTLESQSKDNKKNHQNIWLMPASEME-KSGSCIGNLIRMEHVKIVCDGQYLHNFQCKH-- 504
Query: 844 IQGSFATSNAEQQETKKLKSAPPSMLSSDIHKGDYIMISNDTSGQLAIGTGHVSEIANDF 903
G+ +N + GD +++S + A+ G+V EI +
Sbjct: 505 --GAIPVTN--------------------LMAGDRVIVSGEERSLFALSRGYVKEI--NM 540
Query: 904 IVINCARNILANNIHGDSFDRNTRQVVRSVLLKQKEPLNEKQSLTNSHRYRIDKNESATG 963
+ C DRN + S L +R+D+ E
Sbjct: 541 TTVTCL------------LDRNLSVLPESTL------------------FRLDQEEKNCD 570
Query: 964 LTLARYNLLNLFLPEVLIEAEFSPQKSGEKLQLPVKXXXXXXXXXXXXIVELSEPKWTTH 1023
+ NL L +E F +K + I++ EP++ ++
Sbjct: 571 IDTPLGNLSKL------MENTFVSKKLRD------------------LIIDFREPQFISY 606
Query: 1024 AARI---------PTLNDSFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILV 1074
+ + + N+ Q+ A+++ L +DY LI+GMPGTGKT+ IC LV IL
Sbjct: 607 LSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILY 666
Query: 1075 NQGKSVMVTSYTNSAVDNIIMKLTSRIPRSKMVRLGSGRRVHDLVKPYCITEMLDGDNEN 1134
G SV++TSYT+SAVDNI++KL + +RLG ++VH ++ + E+ +
Sbjct: 667 ACGFSVLLTSYTHSAVDNILLKLAKF--KIGFLRLGQIQKVHPAIQQFTEQEICRSKSIK 724
Query: 1135 ----LSEIIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYKF 1190
L E+ ++ +V TC+GIN P + FD+ I+DEASQ+S P+ +GPL F +F
Sbjct: 725 SLALLEELYNSQLIVATTCMGINHPIFSRK--IFDFCIVDEASQISQPICLGPLFFSRRF 782
Query: 1191 ILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLI 1250
+LVGDH QLPPLV N AR G+ ESLF++L + +VV+L +QYRMN++IMSLSN L
Sbjct: 783 VLVGDHQQLPPLVLNREARALGMSESLFKRL-EQNKSAVVQLTVQYRMNSKIMSLSNKLT 841
Query: 1251 YGGKLQCGTDEIRRQV------------LQFPNNYKCSQDTWLQKAINPEQPVVILDHDG 1298
Y GKL+CG+D++ V L+F +Y S + WL P PV L+ D
Sbjct: 842 YEGKLECGSDKVANAVINLRHFKDVKLELEFYADY--SDNPWLMGVFEPNNPVCFLNTDK 899
Query: 1299 FQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTT 1358
+ EQ + G +S + G IG+++ Y+ Q+ ++
Sbjct: 900 VPAP------EQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDL 953
Query: 1359 LEDL--DIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRINVAVSRAXXXXXX 1416
L ++V T D++QGRDK +++S VRSN D G LL+D RR+NVA++RA
Sbjct: 954 LARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLIL 1013
Query: 1417 XXXXXXXXXXHPLKPFVDHV 1436
PL+ ++H+
Sbjct: 1014 LGCVPSLNCYPPLEKLLNHL 1033
>CE23725 [L] KOG1805 DNA replication helicase
Length = 1069
Score = 291 bits (745), Expect = 5e-78
Identities = 273/1027 (26%), Positives = 449/1027 (43%), Gaps = 129/1027 (12%)
Query: 401 LTCFNQDAGKVNLILRDPWIRFRYEQGMIIHLIEGDHFPNKRLLSNDKDPKTGLENDNLL 460
L C +++ + L+D W E G I+LI + ++ L ND + ++
Sbjct: 119 LECIDKEGTTRIVYLQDHWSEMSIEAGSTINLIGAQAWGDRDFLVND--------DVGIV 170
Query: 461 IVYPDVLLSATAIGTAMDCERRAVLSSKFNEPGEYSLAAVLGNIIHAXXXXXXXXXXXXP 520
I+ PD L+ TA+ +A C R+ VL+ KF + A +LG I+H
Sbjct: 171 ILNPDALVPCTAVASATFCARKTVLNDKFKFGNASNKAMLLGTIMHEIFQTAITSK---- 226
Query: 521 NQFLSKGLALEILDKVIKPFTTEVNMCGESVESVIKTISDEHLPFIIEFVNIYVTKDNSR 580
+ + + ++I +K + E+ + S + + I ++N + NS
Sbjct: 227 KRPVMENDLMKIWNKQAPKYAEEL-VALSFTPSCLDAELQPYFSIICGWINKHYPLSNSF 285
Query: 581 -SWIQVIGTKNKRKLSVSQIVDIEENIWSSKYGLKGYIDVTVETNVDSDGKKLLAPVEIK 639
S + + +K++ + ++ DIEENIW SK GLKG IDVT+ T + L E+K
Sbjct: 286 FSKREPLPSKSE----LLEVYDIEENIWDSKLGLKGKIDVTMRTKSRGGMESL----ELK 337
Query: 640 TGKWK-SNAHEAQGLIYTLLLQDRYDIPVNLHMMLYTKLREFSLQPKILISLKHLLNLRN 698
TGK S+ H Q L+Y ++ RY+ P+ +LY K L +L RN
Sbjct: 338 TGKSSCSSEHTGQVLLYCMMQSSRYEQPIGPGNILYLKDGASHCVTPRAADLLGVLQQRN 397
Query: 699 KLATYLQVMNEEMSDWGGPQHELPAMIQNSK-CDQCFMKTSCMVLNKLSDK-EQTPGLLK 756
KL+ + + LP Q+S+ CD+C KT C K + ++ +K
Sbjct: 398 KLSVHFEDPTTS---------NLPDPRQDSRFCDKCDHKTMCSFYQKTEENFSKSNDKMK 448
Query: 757 HEYTDLTRHLEAQGSQVLELFRSFYGKYDRLLMMEETSITSVTKDTFLMSGTDREAQTGH 816
+ + HLE +E ++ E +TS KD +L S +R + G
Sbjct: 449 NFAENEMAHLEQNH---IEYAANWIRWISAEWKCERERMTSQNKDLWLKSVQER-VEEGT 504
Query: 817 CISQLTIKNVQDQGNGRYLYTFCRENDIQGSFATSNAEQQETKKLKSAPPSMLSSDIHKG 876
C+S L + + + + + +F R K LKS+ + G
Sbjct: 505 CLSDLHPVSEEMSNSQKIIISFSR------------------KFLKSSN----TPTFRPG 542
Query: 877 DYIMISNDTSGQLAIGTGHVSEIANDFIVINCARNILANNIHGDSF--DRNTRQVVRSVL 934
D ++SN +AIG + E+++D ++ + + + + F D+ T S
Sbjct: 543 DVCLLSNKK--HIAIGFALIDEVSDDQQIVKISTDKTIKSRYEAPFHLDKYTSMSTHSTT 600
Query: 935 LKQKEPLNEKQSLTNSHRYRIDKNESATGLTLARYNLLNLFLPEVLIEAEFSPQKSGEKL 994
L L + + R N+L LP ++++A +G L
Sbjct: 601 LGNLVYLLQNDEIGKRLR-----------------NILVDLLPPIIMDA------TGFNL 637
Query: 995 QLPVKXXXXXXXXXXXXIVELSEPKWTTHAARIPTLNDSFNENQKMAIERSLTCRDYNLI 1054
T A + + N Q+ A+ +L D+ ++
Sbjct: 638 ---------------------------TPAIKKIIIKAKLNNEQRKAVVHALATEDFMMV 670
Query: 1055 LGMPGTGKTSVICELVSILVNQGKSVMVTSYTNSAVDNIIMKLTSRIPRSKMVRLGSGRR 1114
G+PG+GKT++I L+ LV K V++ ++T+SAVDNI+ KLT + K++RLGS
Sbjct: 671 EGLPGSGKTTLISVLIQCLVATNKKVLLAAFTHSAVDNILTKLTKEVAAEKILRLGSSSS 730
Query: 1115 VHDLVKPYCITEMLDGDNEN-----LSEIIDAAQVVGVTCLGINDPWLQMRNGDFDYVIL 1169
+ D +K + L+ + + +++ +V TC + L FD VI+
Sbjct: 731 IKDDIKKMTLKAKLENETSEEYYAAVRKVMKTTPIVACTCHHVPRELL-FSYRHFDVVIV 789
Query: 1170 DEASQVSLPVAIGPLRFGYKFILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSV 1229
DEAS V P+ + L KF+LVGD QL PLV + A+ G S EKL SHP V
Sbjct: 790 DEASMVLEPLLLPVLATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQSHPGVV 849
Query: 1230 VELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQD---TWLQKAIN 1286
V L QYRMN EI LS+ L Y +L CG + + R L +Y + D ++KA++
Sbjct: 850 VSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDHIRKALS 909
Query: 1287 PE--QPVVILDHDGFQSTSNQQF-VEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIG 1343
+ V LD QST N + E + G + + G++ +IG
Sbjct: 910 GDIKDSCVFLD---TQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGVKPHEIG 966
Query: 1344 VMSMYKAQMSLLKTTLEDLDIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRI 1403
VMS Y+ Q+ ++ L +++V T D +QGR+K II S+ +N LL+D RR+
Sbjct: 967 VMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSELLKDERRV 1026
Query: 1404 NVAVSRA 1410
NVA++RA
Sbjct: 1027 NVALTRA 1033
>CE02219 [L] KOG1805 DNA replication helicase
Length = 1105
Score = 291 bits (745), Expect = 5e-78
Identities = 273/1027 (26%), Positives = 449/1027 (43%), Gaps = 129/1027 (12%)
Query: 401 LTCFNQDAGKVNLILRDPWIRFRYEQGMIIHLIEGDHFPNKRLLSNDKDPKTGLENDNLL 460
L C +++ + L+D W E G I+LI + ++ L ND + ++
Sbjct: 155 LECIDKEGTTRIVYLQDHWSEMSIEAGSTINLIGAQAWGDRDFLVND--------DVGIV 206
Query: 461 IVYPDVLLSATAIGTAMDCERRAVLSSKFNEPGEYSLAAVLGNIIHAXXXXXXXXXXXXP 520
I+ PD L+ TA+ +A C R+ VL+ KF + A +LG I+H
Sbjct: 207 ILNPDALVPCTAVASATFCARKTVLNDKFKFGNASNKAMLLGTIMHEIFQTAITSK---- 262
Query: 521 NQFLSKGLALEILDKVIKPFTTEVNMCGESVESVIKTISDEHLPFIIEFVNIYVTKDNSR 580
+ + + ++I +K + E+ + S + + I ++N + NS
Sbjct: 263 KRPVMENDLMKIWNKQAPKYAEEL-VALSFTPSCLDAELQPYFSIICGWINKHYPLSNSF 321
Query: 581 -SWIQVIGTKNKRKLSVSQIVDIEENIWSSKYGLKGYIDVTVETNVDSDGKKLLAPVEIK 639
S + + +K++ + ++ DIEENIW SK GLKG IDVT+ T + L E+K
Sbjct: 322 FSKREPLPSKSE----LLEVYDIEENIWDSKLGLKGKIDVTMRTKSRGGMESL----ELK 373
Query: 640 TGKWK-SNAHEAQGLIYTLLLQDRYDIPVNLHMMLYTKLREFSLQPKILISLKHLLNLRN 698
TGK S+ H Q L+Y ++ RY+ P+ +LY K L +L RN
Sbjct: 374 TGKSSCSSEHTGQVLLYCMMQSSRYEQPIGPGNILYLKDGASHCVTPRAADLLGVLQQRN 433
Query: 699 KLATYLQVMNEEMSDWGGPQHELPAMIQNSK-CDQCFMKTSCMVLNKLSDK-EQTPGLLK 756
KL+ + + LP Q+S+ CD+C KT C K + ++ +K
Sbjct: 434 KLSVHFEDPTTS---------NLPDPRQDSRFCDKCDHKTMCSFYQKTEENFSKSNDKMK 484
Query: 757 HEYTDLTRHLEAQGSQVLELFRSFYGKYDRLLMMEETSITSVTKDTFLMSGTDREAQTGH 816
+ + HLE +E ++ E +TS KD +L S +R + G
Sbjct: 485 NFAENEMAHLEQNH---IEYAANWIRWISAEWKCERERMTSQNKDLWLKSVQER-VEEGT 540
Query: 817 CISQLTIKNVQDQGNGRYLYTFCRENDIQGSFATSNAEQQETKKLKSAPPSMLSSDIHKG 876
C+S L + + + + + +F R K LKS+ + G
Sbjct: 541 CLSDLHPVSEEMSNSQKIIISFSR------------------KFLKSSN----TPTFRPG 578
Query: 877 DYIMISNDTSGQLAIGTGHVSEIANDFIVINCARNILANNIHGDSF--DRNTRQVVRSVL 934
D ++SN +AIG + E+++D ++ + + + + F D+ T S
Sbjct: 579 DVCLLSNKK--HIAIGFALIDEVSDDQQIVKISTDKTIKSRYEAPFHLDKYTSMSTHSTT 636
Query: 935 LKQKEPLNEKQSLTNSHRYRIDKNESATGLTLARYNLLNLFLPEVLIEAEFSPQKSGEKL 994
L L + + R N+L LP ++++A +G L
Sbjct: 637 LGNLVYLLQNDEIGKRLR-----------------NILVDLLPPIIMDA------TGFNL 673
Query: 995 QLPVKXXXXXXXXXXXXIVELSEPKWTTHAARIPTLNDSFNENQKMAIERSLTCRDYNLI 1054
T A + + N Q+ A+ +L D+ ++
Sbjct: 674 ---------------------------TPAIKKIIIKAKLNNEQRKAVVHALATEDFMMV 706
Query: 1055 LGMPGTGKTSVICELVSILVNQGKSVMVTSYTNSAVDNIIMKLTSRIPRSKMVRLGSGRR 1114
G+PG+GKT++I L+ LV K V++ ++T+SAVDNI+ KLT + K++RLGS
Sbjct: 707 EGLPGSGKTTLISVLIQCLVATNKKVLLAAFTHSAVDNILTKLTKEVAAEKILRLGSSSS 766
Query: 1115 VHDLVKPYCITEMLDGDNEN-----LSEIIDAAQVVGVTCLGINDPWLQMRNGDFDYVIL 1169
+ D +K + L+ + + +++ +V TC + L FD VI+
Sbjct: 767 IKDDIKKMTLKAKLENETSEEYYAAVRKVMKTTPIVACTCHHVPRELL-FSYRHFDVVIV 825
Query: 1170 DEASQVSLPVAIGPLRFGYKFILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSV 1229
DEAS V P+ + L KF+LVGD QL PLV + A+ G S EKL SHP V
Sbjct: 826 DEASMVLEPLLLPVLATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQSHPGVV 885
Query: 1230 VELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQD---TWLQKAIN 1286
V L QYRMN EI LS+ L Y +L CG + + R L +Y + D ++KA++
Sbjct: 886 VSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDHIRKALS 945
Query: 1287 PE--QPVVILDHDGFQSTSNQQF-VEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIG 1343
+ V LD QST N + E + G + + G++ +IG
Sbjct: 946 GDIKDSCVFLD---TQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGVKPHEIG 1002
Query: 1344 VMSMYKAQMSLLKTTLEDLDIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRI 1403
VMS Y+ Q+ ++ L +++V T D +QGR+K II S+ +N LL+D RR+
Sbjct: 1003 VMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSELLKDERRV 1062
Query: 1404 NVAVSRA 1410
NVA++RA
Sbjct: 1063 NVALTRA 1069
>7291108 [L] KOG1805 DNA replication helicase
Length = 1119
Score = 250 bits (639), Expect = 1e-65
Identities = 285/1040 (27%), Positives = 448/1040 (42%), Gaps = 183/1040 (17%)
Query: 449 DPKTGL----ENDNLLIVYPDVLLSATAIGTAMDCERRAVLSSKFN--EPGE--YSLAAV 500
DP G + + +PD L+S T + ++ C+R++VL +F + G S +
Sbjct: 129 DPSAGCYVVDKEQGYCVSHPDFLISGTTVTGSLFCKRKSVLQERFRGLDSGNSVVSTSRY 188
Query: 501 LGNIIHAXXXXXXXXXXXXPNQFLSKGLALEILDKVIKPFTTEVNMCGESV------ESV 554
N I+ ++ L K L ++ DK + + S+ ++
Sbjct: 189 QHNPIYPECIPFQMVIGTLVHELLQKVLRQKLFDKKHIQSALQEMLASSSLAHLLYASNL 248
Query: 555 IKTISDEHLPFIIEFVNIYVTKDNSRSWIQVIGTKNKRKLSVSQIVDIEENIWSSKYGLK 614
I+ ++HL I+ + +V + V+ + R + +I DIEEN+W + GLK
Sbjct: 249 IQVEMEDHLMKFIDPIVSFVAQYVKGEPPSVLLPEVYRG-QIHEICDIEENLWVPQLGLK 307
Query: 615 GYIDVTVETNVDSDGKKLLAPVEIKTGKWK-SNAHEAQGLIYTLLLQDRYDIPVNLHMML 673
G +DV+V+ ++++ P+E+KTG+ S H+ Q L+Y L+ ++L
Sbjct: 308 GKVDVSVKVKNQRQREEII-PLELKTGRASFSMEHKGQLLLYQLM-HSAQGRDTQSGLLL 365
Query: 674 YTK---LREFSLQPKILISLKHLLNLRNKLATYLQVMNEEMSDWGGPQHELPA---MIQN 727
Y K LRE + + LL LRN LA +L + P +LP + +
Sbjct: 366 YLKEGLLREVASGRN---EQRDLLMLRNDLAYWLTREVAIPASKEDPLEQLPLPEPVYHH 422
Query: 728 SKCDQCFMKTSCMVLNKLSDKEQTPGL-----LKHEYTDLTRHLEAQGSQVLELFRSFYG 782
S C C T C + + K+ + L LK L HL E ++
Sbjct: 423 SACGNCAYNTIC---SSFAQKDSSLQLSDSHPLKKLMPQLLEHLS-------EADHAYVQ 472
Query: 783 KYDRLLMMEE--TSITSVTKDTFLMSGTDREAQTGHCISQLTIKNVQDQ--GNGRYLYTF 838
+ LL +EE +S + + +RE + G I L + Q+ GRY
Sbjct: 473 HWCGLLALEEQHNRQSSHVRSFWTKDPAEREKE-GIAIRHLKLVKGQEVILEEGRY---- 527
Query: 839 CRENDIQGSFATSNAEQQETKKLKSAPPS--MLSSDIHKGDYIMISNDTSGQLAIGTGHV 896
+Q + + A PS + S G+Y++IS+ + +LA+ G +
Sbjct: 528 ----------------RQTLELGEEADPSRDLSLSGFDLGEYVVISS--TSRLAVAAGFI 569
Query: 897 SEIANDFIVINCARNILANNIHGDSFDRNTRQVVRSVLLKQKEPLNEKQSLTNSHRYRID 956
I R + L+ + L+++ S + ID
Sbjct: 570 VSIE-----------------------------ARRLDLRLERDLSQRYS---EETFIID 597
Query: 957 KNESATGLTLARYNLLNLFLPEVLIEAEFSPQKSGEKLQLPVKXXXXXXXXXXXXIVELS 1016
K++S + A +N NL + +L E GE+ Q IV
Sbjct: 598 KHDSQS---FATFNFTNLGM--LLSE--------GERFQ-----------ELRDIIVAKK 633
Query: 1017 EPKWTTHAARIPTLNDS-----FNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVS 1071
P+ +I + N+ Q+ A R+LT + LI G+PGTGKT + LV
Sbjct: 634 PPEQHKVLPKIILTKGAPILLNLNKVQQNAALRALTTSSHLLIKGLPGTGKTQTLVALVR 693
Query: 1072 ILVNQGKSVMVTSYTNSAVDNIIMKLTS-RIPRSKMVRLGSGRRVHDLVKPYCITEMLDG 1130
+L GKSV++T+ T+SAVDN+IM+L +P M+RLGSG R+H ++ E L
Sbjct: 694 LLHLLGKSVLITAQTHSAVDNLIMRLLPFGLP---MMRLGSGSRIHKQLEEIS-EERLTK 749
Query: 1131 DNENLSEIIDAA---QVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFG 1187
D + + E+ A +VGVTCLG P Q R FDY I+DEA+QV P + PL
Sbjct: 750 DCKTVEELEKALGQPSIVGVTCLGCGHPLFQRRQ--FDYCIVDEATQVLQPTVLRPLIHC 807
Query: 1188 YKFILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSN 1247
KF+LVGD QLPP+V++ AR G E+LF++L ++ L LQYRMN I L+N
Sbjct: 808 SKFVLVGDPEQLPPIVRSKEARQRGADETLFQRL--DSEKATAVLSLQYRMNKTITRLAN 865
Query: 1248 VLIYGGKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINP--EQPVVILDHDGFQ----- 1300
L YGG L+C +DE+ +F W+Q+A+ EQ V +++
Sbjct: 866 ELTYGGDLKCASDEV--SGARFEVELLNEAPRWVQRALTTHLEQAVTLINTGDCLERCQE 923
Query: 1301 ------------STSNQQFVEQNDH----------GQLSXXXXXXXXXXXXXXLLAHGIE 1338
S+ Q F E D + + LL G E
Sbjct: 924 FVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAGIVMHLLRYLLKSGYE 983
Query: 1339 VDQIGVMSMYKAQMSLLKTTLEDLDIDV--LTADQFQGRDKDCIIISMVRSNPD------ 1390
+IGV++ Y+AQ+ L K LD D+ T DQFQGRDK+ II S ++ D
Sbjct: 984 ASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGDFSDMER 1043
Query: 1391 QASGVLLRDLRRINVAVSRA 1410
+L D RR+ VA++RA
Sbjct: 1044 SREAEILEDQRRLTVAITRA 1063
>At5g35970 [L] KOG1803 DNA helicase
Length = 750
Score = 151 bits (382), Expect = 6e-36
Identities = 131/433 (30%), Positives = 200/433 (45%), Gaps = 69/433 (15%)
Query: 1034 FNENQKMAIERSLTC-RDYNLILGMPGTGKTSVICELVSILVNQGKSVMVTSYTNSAVDN 1092
F+ +Q+ AI + R ++ G PGTGKT ++ E++++ V QG+ V+VT+ TN+AVDN
Sbjct: 276 FDSSQRRAIALGVNKKRPVMIVQGPPGTGKTGMLKEVITLAVQQGERVLVTAPTNAAVDN 335
Query: 1093 IIMKLTSRIPRSKMVRLGSGRRVHDLVKPYCITEMLDG---------------------- 1130
++ KL +VR+G+ R+ V + E+++
Sbjct: 336 MVEKLLHL--GLNIVRVGNPARISSAVASKSLGEIVNSKLASFRAELERKKSDLRKDLRQ 393
Query: 1131 -------------------------DNENLSEIIDAAQVVGVTCLGINDPWLQMRNGDFD 1165
+ E + EI+ AQVV T +G DP ++ R FD
Sbjct: 394 CLRDDVLAAGIRQLLKQLGKTLKKKEKETVKEILSNAQVVFATNIGAADPLIR-RLETFD 452
Query: 1166 YVILDEASQVSLPVAIGPLRFGYKFILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSH 1225
V++DEA Q P P+ G + IL GD QL P+V + A + GL SL E+ H
Sbjct: 453 LVVIDEAGQSIEPSCWIPILQGKRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASLH 512
Query: 1226 PQSV-VELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKA 1284
+ +L QYRMN I ++ +YGG L+ ++ P + TW+ +
Sbjct: 513 DGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSP----FVKATWITQC 568
Query: 1285 INPEQPVVILDHD---GFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQ 1341
P+V+LD G S ++ ++ G L L+ G+
Sbjct: 569 -----PLVLLDTRMPYGSLSVGCEERLDPAGTGSLYNEGEADIVVNHVISLIYAGVSPMA 623
Query: 1342 IGVMSMYKAQMSLLKTTLEDL----DIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLL 1397
I V S Y AQ+ LL+ L+D ++V T D FQGR+ D +IISMVRSN A G L
Sbjct: 624 IAVQSPYVAQVQLLRERLDDFPVADGVEVATIDSFQGREADAVIISMVRSNNLGAVG-FL 682
Query: 1398 RDLRRINVAVSRA 1410
D RR+NVA++RA
Sbjct: 683 GDSRRMNVAITRA 695
>At2g03270 [L] KOG1803 DNA helicase
Length = 635
Score = 149 bits (375), Expect = 4e-35
Identities = 125/433 (28%), Positives = 201/433 (45%), Gaps = 73/433 (16%)
Query: 1031 NDSFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVNQGKSVMVTSYTNSAV 1090
N + +++QK AI ++L+ +D L+ G PGTGKT+ + E+V V +G ++ + +N AV
Sbjct: 183 NKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKRGSKILACAASNIAV 242
Query: 1091 DNIIMKLTSRIPRSKMVRLGSGRRVHDLVKPYCI-TEMLDGDNENL-------------- 1135
DNI+ +L + K+VR+G R+ V + ++L GDN L
Sbjct: 243 DNIVERLVPH--KVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEMKALNGK 300
Query: 1136 --------------------------------SEIIDAAQVVGVTCLGINDPWLQMRNGD 1163
S++I A V+ T G L R
Sbjct: 301 LLKAKDKNTRRLIQKELRTLGKEERKRQQLAVSDVIKNADVILTTLTGALTRKLDNRT-- 358
Query: 1164 FDYVILDEASQVSLPVAIGPLRFGYKFILVGDHYQLPPLVKNSFARDNGLQESLFEKLCH 1223
FD VI+DE +Q L G + IL GDH QLPP ++++ A GL +LFE+L
Sbjct: 359 FDLVIIDEGAQALEVACWIALLKGSRCILAGDHLQLPPTIQSAEAERKGLGRTLFERLAD 418
Query: 1224 SHPQSVVE-LQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQDTWLQ 1282
+ + L +QYRM+ IM+ S+ +Y K+ + + N +
Sbjct: 419 LYGDEIKSMLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLEN---------VT 469
Query: 1283 KAINPEQPVVILDHDGFQSTSNQQFVEQN-DHGQLSXXXXXXXXXXXXXXLLAHGIEVDQ 1341
K+ + E ++++D G + E + G+ L+ G++
Sbjct: 470 KSSSTEATLLLVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKR------LMESGVQPSD 523
Query: 1342 IGVMSMYKAQMSLLKTTL---EDL-DIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLL 1397
IG+++ Y AQ+ LL+ E L D+++ T D FQGR+K+ IIISMVRSN + G L
Sbjct: 524 IGIITPYAAQVMLLRILRGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVG-FL 582
Query: 1398 RDLRRINVAVSRA 1410
+D RR+NVAV+R+
Sbjct: 583 KDQRRMNVAVTRS 595
>SPCC737.07c [L] KOG1803 DNA helicase
Length = 660
Score = 136 bits (343), Expect = 2e-31
Identities = 124/435 (28%), Positives = 204/435 (46%), Gaps = 72/435 (16%)
Query: 1027 IPTLNDSFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVNQGKSVMVTSYT 1086
I N N +QK A++ S+ ++ +LI G PGTGKT + E++ LV + K ++V +
Sbjct: 203 IKYFNKELNASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEIIQQLVLRNKRILVCGAS 262
Query: 1087 NSAVDNIIMKLTSR-IPRSKMVRLGSGRRV------------------HDLVK------P 1121
N AVDNI+ +L+S IP MVRLG R+ D+++
Sbjct: 263 NLAVDNIVDRLSSSGIP---MVRLGHPARLLPSILDHSLDVLSRTGDNGDVIRGISEDID 319
Query: 1122 YCITEMLDGDN-----------------------ENLSEIIDAAQVVGVTCLGINDPWLQ 1158
C++++ N + ++ I+ A++VV T G Q
Sbjct: 320 VCLSKITKTKNGRERREIYKNIRELRKDYRKYEAKTVANIVSASKVVFCTLHGAGSR--Q 377
Query: 1159 MRNGDFDYVILDEASQVSLPVAIGPLRFGYKFILVGDHYQLPPLVKNSFARDNGLQESLF 1218
++ FD VI+DEASQ P PL K IL GDH QL P V++ S+F
Sbjct: 378 LKGQRFDAVIIDEASQALEPQCWIPLLGMNKVILAGDHMQLSPNVQSKRP-----YISMF 432
Query: 1219 EKLCHSHPQSV-VELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQ 1277
E+L S V L +QYRM+ I + Y KL +E+++++L N + ++
Sbjct: 433 ERLVKSQGDLVKCFLNIQYRMHELISKFPSDTFYDSKL-VPAEEVKKRLLMDLENVEETE 491
Query: 1278 DTWLQKAINPEQPVVILDHDG-FQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHG 1336
T + P+ D G +Q + ++ S LL G
Sbjct: 492 LT--------DSPIYFYDTLGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAG 543
Query: 1337 IEVDQIGVMSMYKAQMSLLKTTLED--LDIDVLTADQFQGRDKDCIIISMVRSNPDQASG 1394
+E I V++ Y AQ++L++ L++ +++++ + D+ QGR+K+ II S+VRSN + G
Sbjct: 544 LEAKDIAVVTPYNAQVALIRQLLKEKGIEVEMGSVDKVQGREKEAIIFSLVRSNDVREVG 603
Query: 1395 VLLRDLRRINVAVSR 1409
L + RR+NVA++R
Sbjct: 604 -FLAEKRRLNVAITR 617
>YKL017c [L] KOG1803 DNA helicase
Length = 683
Score = 135 bits (339), Expect = 6e-31
Identities = 125/451 (27%), Positives = 210/451 (45%), Gaps = 86/451 (19%)
Query: 1030 LNDSFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILV--NQGKSVMVTSYTN 1087
LN + N++QK AI ++ D +I G PGTGKT + EL+ L+ N + +++ +N
Sbjct: 204 LNPNLNDSQKTAINFAIN-NDLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSN 262
Query: 1088 SAVDNIIMKLTSRIPRSKMVRLGSGRRVHDLVKPYCIT----------------EMLDGD 1131
+VD I+ +LT +P + ++R+G R+ D K + + + L +
Sbjct: 263 ISVDTILERLTPLVPNNLLLRIGHPARLLDSNKRHSLDILSKKNTIVKDISQEIDKLIQE 322
Query: 1132 NENLS----------------------------EIIDAAQVVGVTCLGIN---------- 1153
N+ L ++I +++V T G +
Sbjct: 323 NKKLKNYKQRKENWNEIKLLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRD 382
Query: 1154 DPWLQMRNGDFDYVILDEASQVSLPVAIGPL-----RFGYKFILVGDHYQLPPLVKNSFA 1208
DP Q+ FD +I+DE SQ P PL +F +K +L GD+ QLPP +K
Sbjct: 383 DPNFQL----FDTLIIDEVSQAMEPQCWIPLIAHQNQF-HKLVLAGDNKQLPPTIKTEDD 437
Query: 1209 RD--NGLQESLFEKLCHSHPQS--VVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRR 1264
++ + L+ +LF+++ P+ V L +QYRMN +IM + +Y GKL R
Sbjct: 438 KNVIHNLETTLFDRIIKIFPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANR 497
Query: 1265 QVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDG--FQSTSNQQFVEQNDHGQLSXXXXX 1322
++ P T + + + P++ D G FQ T+++ + + + +
Sbjct: 498 LLIDLPT----VDATPSEDDDDTKIPLIWYDTQGDEFQETADEATILGSKYNE----GEI 549
Query: 1323 XXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLED----LDIDVLTADQFQGRDKD 1378
L + + + IGV+S Y AQ+S LK + D DI++ T D FQGR+KD
Sbjct: 550 AIVKEHIENLRSFNVPENSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKD 609
Query: 1379 CIIISMVRSNPDQASGVLLRDLRRINVAVSR 1409
II+S+VRSN G L++ RR+NVA++R
Sbjct: 610 VIILSLVRSNEKFEVG-FLKEERRLNVAMTR 639
>YMR080c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 971
Score = 132 bits (333), Expect = 3e-30
Identities = 132/419 (31%), Positives = 199/419 (46%), Gaps = 69/419 (16%)
Query: 1035 NENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVNQGKS-VMVTSYTNSAVDNI 1093
N +Q A+ L R +LI G PGTGKT +V L K ++V + +N AVD++
Sbjct: 410 NSSQSNAVSHVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHL 468
Query: 1094 IMKLTSRIPRSKMVRLGSGRR------VHDLVKPYCITEMLDGDNENL------------ 1135
KL R K+VRL + R V +L + G+ +NL
Sbjct: 469 AAKL--RDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSA 526
Query: 1136 --------------SEIIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAI 1181
+EI++ A VV TC+G D L + F V++DE++Q S P +
Sbjct: 527 SDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLDTK---FRTVLIDESTQASEPECL 583
Query: 1182 GPLRFGYK-FILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNA 1240
P+ G K ILVGDH QL P++ A D GL++SLFE+L S + L++QYRMN
Sbjct: 584 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLI-SLGHVPIRLEVQYRMNP 642
Query: 1241 EIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQ 1300
+ + + Y G LQ G +R V PN S+ W + I P++ F
Sbjct: 643 YLSEFPSNMFYEGSLQNGVTIEQRTV---PN----SKFPWPIRGI----PMM------FW 685
Query: 1301 STSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLE 1360
+ ++ + N L+ L G++ +QIGV++ Y+ Q + + ++
Sbjct: 686 ANYGREEISANGTSFLN-RIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ 744
Query: 1361 ---DLD------IDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRINVAVSRA 1410
LD ++V + D FQGR+KD II+S VR+N QA G LRD RR+NV ++RA
Sbjct: 745 MNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIG-FLRDPRRLNVGLTRA 802
>Hs18375673 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1118
Score = 130 bits (328), Expect = 1e-29
Identities = 133/445 (29%), Positives = 206/445 (45%), Gaps = 78/445 (17%)
Query: 1012 IVELSEPKWTTHAARIPTLNDSFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVS 1071
I++ PK T A +P LN S K ++R L+ LI G PGTGKT +V
Sbjct: 454 IIKCQLPKRFT-AQGLPDLNHSQVYAVKTVLQRPLS-----LIQGPPGTGKTVTSATIVY 507
Query: 1072 ILVNQGKS-VMVTSYTNSAVDNIIMKLTSRIPRS--KMVRLGSGRR-----------VHD 1117
L QG V+V + +N AVD +LT +I ++ K+VRL + R +H+
Sbjct: 508 HLARQGNGPVLVCAPSNIAVD----QLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHN 563
Query: 1118 LVKPYC-------ITEMLDGDNENLS---------------EIIDAAQVVGVTCLGINDP 1155
++ + ++ D E S E++ A V+ TC+G DP
Sbjct: 564 QIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDP 623
Query: 1156 WLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYK-FILVGDHYQLPPLVKNSFARDNGLQ 1214
++ F +++DE++Q + P + P+ G K ILVGDH QL P+V A GL
Sbjct: 624 --RLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLS 681
Query: 1215 ESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYK 1274
+SLFE+L + + LQ+QYRM+ + + + + Y G LQ G R F
Sbjct: 682 QSLFERLVVLGIRPI-RLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQ-- 738
Query: 1275 CSQDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLA 1334
W Q P++P+ F T Q+ + + L+ L A
Sbjct: 739 -----WPQ----PDKPMF------FYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA 783
Query: 1335 HGIEVDQIGVMSMYKAQMSLLKTTLEDL---------DIDVLTADQFQGRDKDCIIISMV 1385
G + DQIG+++ Y+ Q S L ++ ++++ + D FQGR+KD II+S V
Sbjct: 784 -GAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCV 842
Query: 1386 RSNPDQASGVLLRDLRRINVAVSRA 1410
R+N Q G L D RR+NVA++RA
Sbjct: 843 RANEHQGIG-FLNDPRRLNVALTRA 866
>Hs4504623 [L] KOG1803 DNA helicase
Length = 993
Score = 129 bits (323), Expect = 4e-29
Identities = 117/447 (26%), Positives = 196/447 (43%), Gaps = 68/447 (15%)
Query: 1016 SEPKWTTHAARIPTLNDSFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVN 1075
S P + + N + +QK A+ +L+ ++ +I G PGTGKT+ + E++ V
Sbjct: 174 SAPSPASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVK 233
Query: 1076 QGKSVMVTSYTNSAVDNIIMKLTSRIPRSKMVRLGSGRRVHDLVKPYCIT---------- 1125
QG V+ + +N AVDN++ +L + + +++RLG R+ + V+ + +
Sbjct: 234 QGLKVLCCAPSNIAVDNLVERLA--LCKQRILRLGHPARLLESVQQHSLDAVLARSDSAQ 291
Query: 1126 -------------------------------------EMLDGDNENLSEIIDAAQVVGVT 1148
E+ + + + E + +A VV T
Sbjct: 292 NVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLAT 351
Query: 1149 CLGIN--DPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYKFILVGDHYQLPPLVKNS 1206
G + P + FD V++DE +Q PL K IL GDH QLPP +
Sbjct: 352 NTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSH 411
Query: 1207 FARDNGLQESLFEKLCHSHPQSVVE-LQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQ 1265
A GL SL E+L + VV L +QYRM+ IM ++ +Y G++ + R
Sbjct: 412 KAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQVTAHSSVARHL 471
Query: 1266 VLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQLSXXXXXXXX 1325
+ P +++T + P++++D G +E+ D
Sbjct: 472 LRDLP-GVAATEETGV--------PLLLVDTAGCGLFE----LEEEDEQSKGNPGEVRLV 518
Query: 1326 XXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTL--EDLDIDVLTADQFQGRDKDCIIIS 1383
L+ G+ I V+S Y Q+ LL+ +L ++++ + D FQGR+K+ +I+S
Sbjct: 519 SLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILS 578
Query: 1384 MVRSNPDQASGVLLRDLRRINVAVSRA 1410
VRSN G L D RRINVAV+RA
Sbjct: 579 FVRSNRKGEVGFLAED-RRINVAVTRA 604
>At5g47010 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1235
Score = 126 bits (316), Expect = 3e-28
Identities = 125/426 (29%), Positives = 192/426 (44%), Gaps = 79/426 (18%)
Query: 1035 NENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVNQGKS-VMVTSYTNSAVDNI 1093
N +Q A+ +S+ + +LI G PGTGKT +V + QG+ V+V + +N AVD +
Sbjct: 487 NASQVNAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQL 545
Query: 1094 IMKLTSRIPRSKMVRLGSGRR------VHDLVKPYCITEMLDGDNENLS----------- 1136
K+++ K+VRL + R V L Y + + + L
Sbjct: 546 AEKISAT--GLKVVRLCAKSREAVSSPVEYLTLHYQVRHLDTSEKSELHKLQQLKDEQGE 603
Query: 1137 ------------------EIIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLP 1178
EI +A V+ TC+G D L++ N F V++DE++Q + P
Sbjct: 604 LSSSDEKKYKNLKRATEREITQSADVICCTCVGAAD--LRLSNFRFRQVLIDESTQATEP 661
Query: 1179 VAIGPLRFGYK-FILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYR 1237
+ PL G K +LVGDH QL P++ A GL +SLFE+L + + LQ+QYR
Sbjct: 662 ECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-TLGIKPIRLQVQYR 720
Query: 1238 MNAEIMSLSNVLIYGGKLQCGTDEIRRQV--LQFPNNYKCSQDTWLQKAINPEQPVVILD 1295
M+ + + Y G LQ G I RQ + FP W P +P+
Sbjct: 721 MHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFP---------WPV----PNRPMFFYV 767
Query: 1296 HDGFQ--STSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMS 1353
G + S S ++ + + + L G+ QIGV++ Y+ Q +
Sbjct: 768 QLGQEEISASGTSYLNRTEAANVE---------KLVTAFLKSGVVPSQIGVITPYEGQRA 818
Query: 1354 LLKTTLED---------LDIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRIN 1404
+ + +I+V + D FQGR+KD II+S VRSN Q G L D RR+N
Sbjct: 819 YIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG-FLNDPRRLN 877
Query: 1405 VAVSRA 1410
VA++RA
Sbjct: 878 VALTRA 883
>ECU09g1800 [L] KOG1805 DNA replication helicase
Length = 934
Score = 125 bits (314), Expect = 5e-28
Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 26/222 (11%)
Query: 1035 NENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVNQGKSVMVTSYTNSAVDNII 1094
N++Q+ A+ SL CR+Y +I GMPGTGK+++IC L+ IL K V++ YTN A+ NI
Sbjct: 624 NDDQRSALFLSLNCRNYRIIHGMPGTGKSTLICLLIKILAYLKKKVLLICYTNLALANIT 683
Query: 1095 MKLTSRIPRSKMVRLGSGRRVHDLVKPYCITEMLDGDNENLSEIIDAAQVVGVTCLGIND 1154
KL +G R++ K E+ E D ++V TC D
Sbjct: 684 KKL-------------NGIRIYAAGK----EEVSFKTVEEAGLFFDRIELVVGTCFSFAD 726
Query: 1155 PWLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYKFILVGDHYQLPPLVKNSFARDNGLQ 1214
P N FD+ ++DE SQ+ L + + P+ KF++VGDH QL PL ++S L
Sbjct: 727 PIYV--NRQFDFCVIDEGSQMHLLLTLIPVSISKKFVIVGDHLQLKPLSRSS----KDLS 780
Query: 1215 ESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQ 1256
SLFE H + +L+ QYRM +EIM LSN L YG +L+
Sbjct: 781 LSLFE---HLLGEDHSKLRTQYRMGSEIMRLSNTLFYGNQLR 819
>SPAC16C9.06c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 925
Score = 122 bits (307), Expect = 3e-27
Identities = 130/441 (29%), Positives = 202/441 (45%), Gaps = 93/441 (21%)
Query: 1027 IPTLNDSFNENQKMAIERSLTCRDYNLILGMPGTGKT----SVICELVSILVNQGKS--- 1079
+P LN S +E + + + L+ LI G PGTGKT SV+ L ++ + KS
Sbjct: 390 LPKLNASQSEAVRAVLSKPLS-----LIQGPPGTGKTVTSASVVYHLATMQSRKRKSHSP 444
Query: 1080 VMVTSYTNSAVDNIIMKLTSRIPRS--KMVRLGSGRR-----------VHDLVKPYCITE 1126
V+V + +N AVD +L +I R+ ++VR+ + R +H+ +K Y
Sbjct: 445 VLVCAPSNVAVD----QLAEKIHRTGLRVVRVAAKSREDIESSVSFLSLHEQIKNYKFNP 500
Query: 1127 MLD------GDNENLS----------------EIIDAAQVVGVTCLGINDPWLQMRNGDF 1164
L +N LS E++ AA V+ TC+G D ++ F
Sbjct: 501 ELQRLLKLRSENNELSIQDEKKLRILVAAAEKELLRAAHVICCTCVGAGDR--RISKYKF 558
Query: 1165 DYVILDEASQVSLPVAIGPLRFGYK-FILVGDHYQLPPLVKNSFARDNGLQESLFEKLCH 1223
V++DEA+Q S P + PL G K +LVGDH QL P+V N L +SLFE+L
Sbjct: 559 RSVLIDEATQASEPECMIPLVLGAKQVVLVGDHQQLGPVVMNKKVALASLSQSLFERLII 618
Query: 1224 SHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCG---TDEIRRQVLQFPNNYKCSQDTW 1280
S L +QYRM+ + + Y G LQ G ++ I R V FP W
Sbjct: 619 LG-NSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARHV-DFP---------W 667
Query: 1281 LQKAINPEQPVVILDHDGFQ--STSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIE 1338
+Q P+ P++ + G + S S F+ + + L +
Sbjct: 668 IQ----PDSPLMFYANFGQEELSASGTSFLNRTE---------ASTCEKIVTTFLRSNVL 714
Query: 1339 VDQIGVMSMYKAQMSLLKTTLEDLD---------IDVLTADQFQGRDKDCIIISMVRSNP 1389
+QIG+++ Y Q S + +++ ++V + D FQGR+KD II+S VRS+
Sbjct: 715 PEQIGIVTPYDGQRSYIVQYMQNNGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSE 774
Query: 1390 DQASGVLLRDLRRINVAVSRA 1410
Q G + D RR+NVA++RA
Sbjct: 775 HQGIG-FVNDPRRLNVALTRA 794
>ECU10g1640 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 782
Score = 120 bits (302), Expect = 1e-26
Identities = 119/404 (29%), Positives = 183/404 (44%), Gaps = 59/404 (14%)
Query: 1035 NENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVNQ-GKSVMVTSYTNSAVDNI 1093
N +Q++A+ +L R LI G PGTGKT V +V LV G V+V + +N+AVD +
Sbjct: 346 NASQEVAVRAALG-RKVTLIQGPPGTGKTLVSSAIVYNLVRHYGGKVLVVAPSNTAVDQL 404
Query: 1094 IMKLTS---RIPR-------------------SKMVRLGSGRRVHDLVKPYCITEMLDGD 1131
+K+ R+ R + L GR+ D + D
Sbjct: 405 TLKIHKTGLRVLRVMSRRREYGQSDVSFLSLHENLRELQEGRKRKDEDHSRYDSIYNDEV 464
Query: 1132 NENLS-EIIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYK- 1189
NE+L ++++ A+V+ TC + F V++DEA Q + P+++ PL +G K
Sbjct: 465 NESLKKQLLNQAEVITCTC--VTSGQKMFNRFKFHCVLIDEAVQSTEPLSLIPLVYGCKK 522
Query: 1190 FILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVL 1249
+LVGDH QL P + G ++SLFE+L S L +QYRM+A++ + +
Sbjct: 523 LVLVGDHKQLGPTILCKKVAQAGFKQSLFERLI-SIGVVPYMLSVQYRMDADLCEWPSEM 581
Query: 1250 IYGGKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQSTSNQQFVE 1309
Y G+L G R L P N+ E+ S S FV
Sbjct: 582 FYNGELLTGGKNFCRFDLGIPVNF-------FYVCYGREE----------VSASGTSFVN 624
Query: 1310 QNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTL---EDLDIDV 1366
Q + L G+ QIGV++ Y+ Q S + + E ++++
Sbjct: 625 QAE---------ALYCESIIRHLFKCGVTESQIGVITPYEGQRSYILNRIFGAEPGNLEI 675
Query: 1367 LTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRINVAVSRA 1410
D FQGR+KD II+S+VRSN Q G + D RR+NV ++RA
Sbjct: 676 SNVDGFQGREKDFIIVSLVRSNLYQGIG-FVGDKRRMNVTLTRA 718
>CE28367 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1069
Score = 116 bits (291), Expect = 2e-25
Identities = 124/432 (28%), Positives = 196/432 (44%), Gaps = 78/432 (18%)
Query: 1025 ARIPTLNDSFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVNQGK-SVMVT 1083
A +P LN S Q A+++ LT R +LI G PGTGKT V +V LV + + +V+V
Sbjct: 441 AGLPELNSS----QMQAVKQVLT-RPLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVC 495
Query: 1084 SYTNSAVDNIIMKLTSRIPRSKMVRLGSGRRVH-DLVKPYC----------------ITE 1126
S +N AVD++ K+ K+VRL + R H + PY + +
Sbjct: 496 SPSNIAVDHLAEKIHKT--GLKVVRLCARSREHSETTVPYLTLQHQLKVMGGAELQKLIQ 553
Query: 1127 MLDGDNE---------------NLSEIIDAAQVVGVTCLGINDPWL-QMRNGDFDYVILD 1170
+ D E E++ AA V+ TC D L ++R V++D
Sbjct: 554 LKDEAGELEFKDDLRYMQLKRVKEHELLAAADVICCTCSSAADARLSKIRTRT---VLID 610
Query: 1171 EASQVSLP-VAIGPLRFGYKFILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSV 1229
E++Q + P + + +R + +LVGDH QL P+V A GL +SLFE+L +
Sbjct: 611 ESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLLGIRPF 670
Query: 1230 VELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQ 1289
LQ+QYRM+ + + + Y G LQ G E R + ++ P +
Sbjct: 671 -RLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWP-----------KPNK 718
Query: 1290 PVVILDHDGFQ--STSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSM 1347
P G + S S F+ + + + L+ G++ QIGV++
Sbjct: 719 PAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSK---------LIKAGVQPHQIGVITP 769
Query: 1348 YKAQMSLLKTTLEDL---------DIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLR 1398
Y+ Q S + + ++++ + D FQGR+KD II++ VRSN G L
Sbjct: 770 YEGQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIG-FLS 828
Query: 1399 DLRRINVAVSRA 1410
D RR+NVA++RA
Sbjct: 829 DPRRLNVAITRA 840
>CE19303 [L] KOG1803 DNA helicase
Length = 693
Score = 109 bits (273), Expect = 3e-23
Identities = 116/434 (26%), Positives = 192/434 (43%), Gaps = 55/434 (12%)
Query: 1016 SEPKWTTHAARIPTLNDSFNENQKMAIERSL-TCRDYNLILGMPGTGKTSVICELVSILV 1074
S P + H +I L ++ N +Q A+ ++ T R+ I G PGTGKT VI E+V L+
Sbjct: 221 SIPMPSIHDRKIGNLPETLNPSQVAAVSAAMNTQRNLLCIQGPPGTGKTRVIAEIVHQLM 280
Query: 1075 NQGKSVMVTSYTNSAVDNIIMKLTSRI------------------PRSKMVRLGSGRRVH 1116
+ K V+V + T+ AV N + T R+ + + S ++
Sbjct: 281 KKKKKVLVCAPTHVAVRNAMDATTGRMIEEMPEEKAEQQLCLLANTKDEFQNHKSASKLE 340
Query: 1117 DLVKPYCITEMLDGDNENLS-----------EIIDAAQVVGVTCLGIND-PWLQMRNGDF 1164
++ K D + +S I ++ + LG + L + +
Sbjct: 341 EIKKQLSTMSTSDPLYKKMSYEYYLIRNSIFRSIFYPKLAVFSTLGTSSIQKLPEYHWNA 400
Query: 1165 DYVILDEASQVSLPVAIGPLRFG---YKFILVGDHYQLPPLVKNSFARDNGLQESLFEKL 1221
D +I+DEA+Q + P P+ K ILVGD QLP +V + A + SL EKL
Sbjct: 401 DVMIVDEAAQCTEPATWVPVLTTPSCKKLILVGDQKQLPAVVLSDKAMKGNFKLSLMEKL 460
Query: 1222 CHSHPQSVVELQL--QYRMNAEIMSLSNVLIYGGKLQCG---TDEIRRQVLQFPNNYKCS 1276
+ + + L QYRMN +IM+ SN + Y +L +D R + PN
Sbjct: 461 AEEFSSNNINILLNEQYRMNKKIMNWSNEVFYENQLTAHSTVSDITLRDIC--PN---LP 515
Query: 1277 QDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHG 1336
+D L P+++++ + + S+++F H + ++ G
Sbjct: 516 EDHVL------NNPIMMINMENVKDRSHEEF---ESHSFTNTDELNLVTEYVNRLVVDLG 566
Query: 1337 IEVDQIGVMSMYKAQMSLLKTTLEDLDIDVLTADQFQGRDKDCIIISMVRSNPDQASGVL 1396
I I V+S Y AQ+ L+ ++ +DV T D FQG ++ +I +VR N + G
Sbjct: 567 INPKAIAVISPYYAQIEKLRRSI-PFRVDVNTVDAFQGHERQVVIFCLVRDNDEGQIG-F 624
Query: 1397 LRDLRRINVAVSRA 1410
L + RR+NVAV+RA
Sbjct: 625 LNETRRLNVAVTRA 638
>CE08664 [L] KOG1803 DNA helicase
Length = 633
Score = 105 bits (261), Expect = 7e-22
Identities = 116/435 (26%), Positives = 192/435 (43%), Gaps = 67/435 (15%)
Query: 1035 NENQKMAIERSLT-CRDYNLILGMPGTGKTSVICELVSILVNQGKSVMVTSYTNSAVDNI 1093
NE Q+ AI+ +L R I G PGTGKT + L+ L+ Q K V+V + T A+ NI
Sbjct: 75 NEKQRTAIKMALNENRKLVCIQGPPGTGKTFTLTLLLCRLIQQKKQVVVLAPTREALANI 134
Query: 1094 IMKLTSRIPR--------------------SKMVR-LGSGRRVHDLVKPYCITEMLDG-- 1130
M + R +K R L + V DL K + E+ +
Sbjct: 135 RMMTKKTLKRMGIKVHEHALMDTNEYRDVINKSDRALMAAEEVRDLRKAFDNGEITENVL 194
Query: 1131 -----------DNENLSEIIDAAQVVGVTCLGINDPWLQMRNGDFD--YVILDEASQVSL 1177
NE +E+I +V T +G + M++ FD I+DEA+QV +
Sbjct: 195 DEMRQSIINRVRNEVGAEVIGNVRVAFAT-IGASFVDFVMKHKKFDPCLCIIDEAAQV-M 252
Query: 1178 PVAIGPLRFGYK-FILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQ-SVVELQLQ 1235
P + K ++ GD QLP LV A+ GLQ S+ +++ S + L+ Q
Sbjct: 253 EAQTWPAVYKMKRIVMAGDPKQLPALVFTDEAKAFGLQNSVMDRILEKKNNFSWIMLENQ 312
Query: 1236 YRMNAEIMSLSNVLIYGGKLQ----CGTDEIRRQVLQFPNNYK------CSQDTWLQKAI 1285
YR NA+I + SN Y +L+ C + + P ++ DT L++ +
Sbjct: 313 YRSNAKIATWSNTCFYHNQLKTDVKCHEYSLHTILNPQPKKFRNLFDPLVLIDTSLERDV 372
Query: 1286 NPEQPVVILDHDGFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVM 1345
E+ + +H F + S + + + L+ LL +G++ I ++
Sbjct: 373 --EKRLETYEHAVFDTNSINKTKQGFSYANLAEAKIAIGHYQR---LLKYGVQPSDIAII 427
Query: 1346 SMYKAQMSLLKTTLEDLDID----------VLTADQFQGRDKDCIIISMVRSNPDQASGV 1395
+ YK Q SL+ +E+ + + T D QG++ + +I +MVRSNP + G
Sbjct: 428 TPYKGQTSLVTKLMEEFGAETGYTDFVQTTIGTVDSVQGKEYEVVIFTMVRSNPRKTMG- 486
Query: 1396 LLRDLRRINVAVSRA 1410
+ +LRR+NV ++RA
Sbjct: 487 FVSELRRLNVVITRA 501
>Hs14251207_2 [A] KOG1804 RNA helicase
Length = 776
Score = 105 bits (261), Expect = 7e-22
Identities = 121/435 (27%), Positives = 191/435 (43%), Gaps = 74/435 (17%)
Query: 1021 TTHAARIPTLNDSFNENQKMAIERSLT--CRDYNLIL-GMPGTGKTSVICELVSIL--VN 1075
T A ++ N NENQK+A++R L+ CR IL G PGTGKT I E V +
Sbjct: 297 TPKARKMEFFNPVLNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFAL 356
Query: 1076 QGKSVMVTSYTNSAVDNIIMKL--TSRIPRSKMVRLGSGRR----VHDLVKPYCITEMLD 1129
++V + +NSA D + ++L + + + MVR+ + R V D VKPYC
Sbjct: 357 PDSRILVCAPSNSAADLVCLRLHESKVLQPATMVRVNATCRFEEIVIDAVKPYC------ 410
Query: 1130 GDNENLSEIIDAAQVVGVTCLGINDPW-LQMRNGDFDYVILDEASQVSLPVAIGPLRF-- 1186
D E++ + +++ TC + + +R G F +V +DEA Q S P + PL
Sbjct: 411 RDGEDIWKA-SRFRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMS 469
Query: 1187 --GYKFILVGDHYQLPPLVKNSFARDNGLQESLFEKL---------------CHSH-PQS 1228
+ +L GD QL P++K+ A GL S E+L C +H P
Sbjct: 470 DISGQIVLAGDPMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLL 529
Query: 1229 VVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPE 1288
V +L YR + ++ L + L Y +L+ C+ T + + E
Sbjct: 530 VTKLVKNYRSHEALLMLPSRLFYHRELEV-----------------CADPTVVTSLLGWE 572
Query: 1289 QPVVILDHDGFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXX--LLAHGI----EVDQI 1342
+ L GF + + G+ LLAH I I
Sbjct: 573 K----LPKKGFPLIFHGVRGSEAREGKSPSWFNPAEAVQVLRYCCLLAHSISSQVSASDI 628
Query: 1343 GVMSMYKAQMSLLKTTLED---LDIDVLTADQFQGRDKDCIIISMVRSNPDQASG----- 1394
GV++ Y+ Q+ ++ L + +DI V + ++FQG++ IIIS VRSN D+
Sbjct: 629 GVITPYRKQVEKIRILLRNVDLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFL 688
Query: 1395 VLLRDLRRINVAVSR 1409
L + +R NVA++R
Sbjct: 689 GFLSNSKRFNVAITR 703
>At1g05460 [A] KOG1804 RNA helicase
Length = 1002
Score = 104 bits (260), Expect = 9e-22
Identities = 115/415 (27%), Positives = 182/415 (43%), Gaps = 55/415 (13%)
Query: 1030 LNDSFNENQKMAIERSLTCRDYN--LILGMPGTGKTSVICELVSILVNQGKS--VMVTSY 1085
++ + N Q +IE L C+ +I G PGTGKT + E + L ++ V+V +
Sbjct: 393 ISPALNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAP 452
Query: 1086 TNSAVDNIIMKLTS----RIPRSKMVRLGSGRRVHDLVKP----YCITEMLDGDNENLSE 1137
+NSA D+I+ KL RI +++ RL + R ++ +KP +C + L L
Sbjct: 453 SNSAADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDELIFKCPPLKA 512
Query: 1138 IIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLP---VAIGPLRFGYKFI-LV 1193
+ VV + G F +++LDEA Q S P +A+ L + L
Sbjct: 513 LTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLA 572
Query: 1194 GDHYQLPPLVKNSFARDNGLQESLFEKL------CHSHPQSVVELQLQYRMNAEIMSLSN 1247
GD QL P++ + A GL +S E+L C V +L YR + EI+ L +
Sbjct: 573 GDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYVTKLVKNYRCHPEILDLPS 632
Query: 1248 VLIYGGKLQCG---TDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQSTSN 1304
L Y G+L TD + + PN E P+V G Q
Sbjct: 633 KLFYDGELVASKEDTDSVLASLNFLPNK---------------EFPMVFY---GIQGCDE 674
Query: 1305 QQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLEDLD- 1363
+ E N+ + ++ + IGV++ Y+ Q+ +K L+ LD
Sbjct: 675 R---EGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVITPYRQQVMKIKEVLDRLDM 731
Query: 1364 --IDVLTADQFQGRDKDCIIISMVRSNP-----DQASGV-LLRDLRRINVAVSRA 1410
+ V + +QFQG++K IIIS VRS D+A + L + RR NVA++RA
Sbjct: 732 TEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRA 786
>ECU05g1110 [L] KOG1803 DNA helicase
Length = 563
Score = 99.0 bits (245), Expect = 5e-20
Identities = 109/397 (27%), Positives = 176/397 (43%), Gaps = 71/397 (17%)
Query: 1031 NDSFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVNQGKSVMVTSYTNSAV 1090
+ S N +Q+ A+E L CR ILG PGTGKT + E++S L+ SV+V +N +V
Sbjct: 173 DSSLNSSQRSAVEM-LGCRTPYKILGPPGTGKTRTVVEIISQLLAANSSVLVCGPSNVSV 231
Query: 1091 DNIIMK-LTSR---IPRSKMVRLGSGRRVHDLVKPYCITEM-------LDGD-------N 1132
DNII + L SR + RLGS + + + E GD
Sbjct: 232 DNIIERFLRSRYFLCNQPSFYRLGSSTKGLSHLNLDFLAESHTKFMKEEKGDRSFRRDLR 291
Query: 1133 ENLSEIIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYKFIL 1192
E + ++ Q L+ + FD+V++DEA Q S + + G FIL
Sbjct: 292 ERQRKFVEEKQANSPVVFATLFSSLKEKR-KFDWVLVDEACQASEAESFLAVVKGRAFIL 350
Query: 1193 VGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYG 1252
VGD QL P SL+E L + L QYRM ++++ SN + Y
Sbjct: 351 VGDPMQLCPET-----------SSLYESLA----LPTMLLNEQYRMPSDLLRFSNEVFYR 395
Query: 1253 GKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQND 1312
G+++ T R F ++ DT Q+ E +
Sbjct: 396 GQVKSAT---RECTPVFGKSFILFVDT--------------------------QYFELYE 426
Query: 1313 HGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLEDLDIDVLTADQF 1372
G +S + ++ +Q+G+++ Y +Q+ LL+ E +D++V T D F
Sbjct: 427 SGGVSKSNIGEAEIVRS---IVGILKEEQVGIIAPYTSQVLLLR---EMVDVEVSTVDGF 480
Query: 1373 QGRDKDCIIISMVRSNPDQASGVLLRDLRRINVAVSR 1409
QG+++D II+++VR N D+ L + +R+NVA++R
Sbjct: 481 QGQERDYIILTLVRCN-DRDDFGFLDNGKRLNVALTR 516
>SPBC29A10.10c [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1944
Score = 94.0 bits (232), Expect = 2e-18
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 35/287 (12%)
Query: 1136 SEIIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYKF-ILVG 1194
++++ A +V T L F VI+DEA+Q +I PL++G + ++VG
Sbjct: 1482 NQLLQEADIVCATLSASGHELLLNAGLTFRTVIIDEAAQAVELSSIIPLKYGCESCVMVG 1541
Query: 1195 DHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGK 1254
D QLPP V + + G +SL+ ++ H +S L +QYRMN EI + Y K
Sbjct: 1542 DPNQLPPTVLSKTSAKFGYSQSLYVRMFKQHNESACLLSIQYRMNPEISRFPSKFFYNSK 1601
Query: 1255 LQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVV-ILDHDGFQSTSNQQFVEQNDH 1313
L L PN + W + +P+ + + G ++ SN +
Sbjct: 1602 L-----------LDGPNMSAVTSRPWHE---DPQLGIYRFFNVHGTEAFSNSK------- 1640
Query: 1314 GQLSXXXXXXXXXXXXXXLLAHGIEVD---QIGVMSMYKAQMSLLKTTLED-------LD 1363
L L+ + +D +IGV++ Y++Q+ L++ +
Sbjct: 1641 -SLYNVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKH 1699
Query: 1364 IDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRINVAVSRA 1410
+D+ T D FQG++KD II S VRS+ G L+DLRR+NVA++RA
Sbjct: 1700 LDIHTVDGFQGQEKDIIIFSCVRSSMSGGIG-FLQDLRRLNVALTRA 1745
>Hs7662212 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 828
Score = 90.1 bits (222), Expect = 2e-17
Identities = 78/266 (29%), Positives = 123/266 (45%), Gaps = 44/266 (16%)
Query: 1164 FDYVILDEASQVSLPVAIGPLRFGY-KFILVGDHYQLPPLVKNSFARDNGLQESLFEKLC 1222
F VI+DEA Q + PL K ILVGD QLPP V + A++ G +S+ + C
Sbjct: 326 FSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFC 385
Query: 1223 HSHPQSV----------VELQLQYRMNAEIMSLSNVLIYGGKLQCG--TDEIRRQVLQFP 1270
++V ++L +QYRM+ +I + +Y L+ T+ IR
Sbjct: 386 RLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIR------- 438
Query: 1271 NNYKCSQDTWLQKAINPEQPVVILD-HDGFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXX 1329
CS D W P QP ++ D DG + N ++ + +
Sbjct: 439 ----CSSD-W------PFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEIIKLIKDKRKD 487
Query: 1330 XXLLAHGIEVDQIGVMSMYKAQMSLLKTTLE-DLD----IDVLTADQFQGRDKDCIIISM 1384
+ IG+++ YKAQ ++++ L+ + D +V T D FQGR KDC+I++
Sbjct: 488 -------VSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTC 540
Query: 1385 VRSNPDQASGVLLRDLRRINVAVSRA 1410
VR+N Q S L L+R+NV ++RA
Sbjct: 541 VRANSIQGSIGFLASLQRLNVTITRA 566
>SPAC6G9.10c [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1687
Score = 88.6 bits (218), Expect = 7e-17
Identities = 85/285 (29%), Positives = 129/285 (44%), Gaps = 35/285 (12%)
Query: 1138 IIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYK-FILVGDH 1196
I+ A VV T G + + +F VI+DEA+Q I PLR+G K ILVGD
Sbjct: 1346 ILKQADVVCATLSGSGHDLVAHSSLNFSTVIIDEAAQAVELDTIIPLRYGAKKCILVGDP 1405
Query: 1197 YQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQ 1256
QLPP V + A +SLF ++ + + L +QYRM+ +I + Y +L+
Sbjct: 1406 NQLPPTVLSKKAASLNYSQSLFVRIQKNFSNQMCLLSIQYRMHPDISHFPSKKFYDSRLE 1465
Query: 1257 CGTDEIRRQVLQFPNNYKCSQDTWLQKAINPE-QPVVILDHDGFQSTSNQQFVEQNDHGQ 1315
G N + +Q W +NP+ + D G + TSN + +
Sbjct: 1466 DG-----------DNMAEKTQQVW---HVNPKFTQYRLFDVRGKERTSNTMSTYNLEEVE 1511
Query: 1316 LSXXXXXXXXXXXXXXLLAHGIEVD---QIGVMSMYKAQMSLLKTTLE-------DLDID 1365
LL +V+ +IGV++ Y++Q+ L+ + ID
Sbjct: 1512 --------YLVNMVDELLNKFPDVNFTGRIGVITPYRSQLHELRRAFKVKYGKSFMSTID 1563
Query: 1366 VLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRINVAVSRA 1410
+ T D FQG++KD I S V+S G LRD RR+NVA++RA
Sbjct: 1564 IQTVDGFQGQEKDIIFFSCVKSYSKHGIG-FLRDFRRLNVALTRA 1607
>YLR430w [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 2231
Score = 85.9 bits (211), Expect = 4e-16
Identities = 83/292 (28%), Positives = 132/292 (44%), Gaps = 28/292 (9%)
Query: 1129 DGDNENL-SEIIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFG 1187
D D N + I+ + ++ T G L FD VI+DEA Q + +I PLR+G
Sbjct: 1548 DLDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYG 1607
Query: 1188 YK-FILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLS 1246
K I+VGD QLPP V + A + +SLF ++ S L +QYRM+ I
Sbjct: 1608 GKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRM--EKNSSPYLLDVQYRMHPSISKFP 1665
Query: 1247 NVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQSTSNQQ 1306
+ Y G+L+ G P ++ W Q + P P D S +Q
Sbjct: 1666 SSEFYQGRLKDG-----------PGMDILNKRPWHQ--LEPLAPYKFFD---IISGRQEQ 1709
Query: 1307 FVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIE-VDQIGVMSMYKAQMSLLKTT------- 1358
+ + + + I+ +IG++S Y+ QM ++
Sbjct: 1710 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGG 1769
Query: 1359 LEDLDIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRINVAVSRA 1410
+ + ID T D FQG++K+ I+IS VR++ ++S L+D RR+NVA++RA
Sbjct: 1770 MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRA 1821
>7292369_2 [A] KOG1804 RNA helicase
Length = 754
Score = 84.7 bits (208), Expect = 1e-15
Identities = 106/444 (23%), Positives = 189/444 (41%), Gaps = 68/444 (15%)
Query: 1025 ARIPTLNDSFNENQKMAIERSLTCRDYNL---ILGMPGTGKTSVICELVSILVNQ--GKS 1079
+++ N S N QK A+ L N+ + G PG+GKT + E + LV G
Sbjct: 255 SKLEWYNQSLNSIQKRAVFNILRGEAENIPYVLFGPPGSGKTMTLIETLLQLVRNLPGAR 314
Query: 1080 VMVTSYTNSAVDNIIMKL--TSRIPRSKMVRLGSGRRVH-DLVKP----YCITEMLD--G 1130
++V + +NS+ D + +L + + + +RL S +V DL+ P YC T + G
Sbjct: 315 ILVGTPSNSSADLVTKRLIDSKALLQGDFIRLVSYNQVEKDLIPPEIMSYCATSDVGAVG 374
Query: 1131 DNENLSEIIDA-------AQVVGV------TCLGINDPWLQMR--NGDFDYVILDEASQV 1175
E+ + ++ A+ +G TC + + +LQ+ G F +V+ DEA Q
Sbjct: 375 SCEDKMMVTESGLKLRCQAKFIGTHRITISTCTTLGN-FLQLGFPAGHFTHVLFDEAGQC 433
Query: 1176 SLPVAIGPL----RFGYKFILVGDHYQLPPLVKNSFARDNGLQESLFEKLCHS------- 1224
+ P + P+ + + +L GD QL +V + A G S E+L
Sbjct: 434 TEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKDL 493
Query: 1225 ---------HPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKC 1275
+P + +L YR IMS+ + L Y +L E + + + +C
Sbjct: 494 QRFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLRC 553
Query: 1276 SQDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAH 1335
+ + + H F + + ND L
Sbjct: 554 ---------VFESEKDIPQAHGTFFYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRA 604
Query: 1336 GIEVDQIGVMSMYKAQMSLLKTTLEDLDI---DVLTADQFQGRDKDCIIISMVRSNPD-- 1390
+ DQIG+++ Y+ Q+ +L++ D+ + + ++FQG+++D I+IS VRS+ +
Sbjct: 605 NVTADQIGIITPYQKQVKMLRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEIL 664
Query: 1391 ----QASGVLLRDLRRINVAVSRA 1410
+ S +R +R+NVAVSRA
Sbjct: 665 RMDARFSLGFVRCSKRLNVAVSRA 688
>7302834 [A] KOG1804 RNA helicase
Length = 765
Score = 83.6 bits (205), Expect = 2e-15
Identities = 105/408 (25%), Positives = 177/408 (42%), Gaps = 74/408 (18%)
Query: 1053 LILGMPGTGKTSVICE-LVSILVNQGKS-VMVTSYTNSAVDNIIMKLTSRI--------- 1101
++ G PGTGKT+ I E ++ + + Q +S ++VT+ +NSA D I +KL I
Sbjct: 273 ILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSACDTIALKLCEYIESNIRLQEH 332
Query: 1102 --------PRSKMVRLGSGRRVHDLVKPYCITEMLDGDNENLSE-IIDAAQVVGVTCLGI 1152
P +++R+ S R +++ K + L N N S+ I D + + GI
Sbjct: 333 FAQQKLPEPDHQLIRVYS-RSIYE--KGFASVPSLLLKNSNCSKSIYDHIKASRIVKYGI 389
Query: 1153 NDPWLQM----------RNGDFDYVILDEASQVSLPVAIGPLRFGYK------FILVGDH 1196
L R F ++ +DEA + P A+ + G K IL GDH
Sbjct: 390 IVATLCTVARLVTDTLGRYNFFTHIFIDEAGASTEPEALIGI-MGIKQTADCHVILSGDH 448
Query: 1197 YQLPPLVKNSFARDNGLQESLFEKL----CHSHPQS-------VVELQLQYRMNAEIMSL 1245
QL ++K++ A GL SL E+L C+ ++ + L YR + +I+ L
Sbjct: 449 KQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRL 508
Query: 1246 SNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQSTSNQ 1305
N L Y G+L+ Q P W NP+ P++ FQ+T
Sbjct: 509 FNELYYNGELKA----------QAPAMDVNLAANW-SVLTNPQFPII------FQATHGV 551
Query: 1306 QFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLEDL--- 1362
EQN + + + + +G+++ Y AQ L+ L+
Sbjct: 552 TNREQNSTSSYNNLEAEVICWYVKRLINDRVVGQEDVGIVAPYTAQGKLVTKLLQSKGYP 611
Query: 1363 DIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRINVAVSRA 1410
+++V + + +QGR+K II S+V+S + + + RR+NV +SRA
Sbjct: 612 NVEVGSVETYQGREKTIIIASLVKSFTNMG---FMCNPRRVNVLLSRA 656
>At1g16800 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1939
Score = 77.4 bits (189), Expect = 2e-13
Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 37/265 (13%)
Query: 1164 FDYVILDEASQVSLPVAIGPLRF----GYKFILVGDHYQLPPLVKNSFARDNGLQESLFE 1219
FD V++DEA+Q P + PL+ G K I+VGD QLP V ++ A + S+FE
Sbjct: 1429 FDAVVIDEAAQALEPATLIPLQLLKSRGTKCIMVGDPKQLPATVLSNVASKFLYECSMFE 1488
Query: 1220 KLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQDT 1279
+L + ++ L QYRM+ EI ++ Y KL G D + + F N+
Sbjct: 1489 RLQRA-GYPILMLTQQYRMHPEICRFPSMHFYDNKLLNGVD-MSSKSAPFHENHHLG--- 1543
Query: 1280 WLQKAINPEQPVVILD-HDGFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIE 1338
P V D DG + S N+ + G
Sbjct: 1544 ----------PYVFYDIVDGQEHRSGDSSSVCNEQEAEAAVQLLRFFKKRYPSEFVAG-- 1591
Query: 1339 VDQIGVMSMYKAQMSLLKTTLE-------DLDIDVLTADQFQGRDKDCIIISMVRSNPDQ 1391
+IG+++ YK Q+++L++ D+++ T D FQG++ D +++S VR+
Sbjct: 1592 --RIGIITPYKRQLAVLRSRFTGAFGAQVTADMEMNTVDGFQGKEVDILVLSTVRATHSA 1649
Query: 1392 ASGV------LLRDLRRINVAVSRA 1410
GV + D+RR+NVA++RA
Sbjct: 1650 PDGVNQSRIGFVADVRRMNVALTRA 1674
>Hs14211540 [A] KOG1804 RNA helicase
Length = 1003
Score = 75.9 bits (185), Expect = 4e-13
Identities = 99/418 (23%), Positives = 166/418 (39%), Gaps = 86/418 (20%)
Query: 1053 LILGMPGTGKTSVICELVSILVNQ--GKSVMVTSYTNSAVDNIIMKLTSRIPRSKMVRLG 1110
+I G PGTGKT + E + +V ++ + +NS D + +L +P S L
Sbjct: 521 IIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLA 580
Query: 1111 SGRRVHDL---VKPYCITEMLDGD-----NENLSE-------IIDAAQVVGVTCLGINDP 1155
R + + +KP C + G+ + L E +I A ++V
Sbjct: 581 PSRDIRMVPEDIKPCCNWDAKKGEYVFPAKKKLQEYRVLITTLITAGRLVSA-------- 632
Query: 1156 WLQMRNGDFDYVILDEASQVSLP---VAIGPLRF-------GYKFILVGDHYQLPPLVKN 1205
Q F ++ +DEA P VAI L G + +L GD QL P++++
Sbjct: 633 --QFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRS 690
Query: 1206 SFARDNGLQESLFEKLCHSH-----------PQSVVELQLQYRMNAEIMSLSNVLIYGGK 1254
+ +GL SL E+L + PQ + +L YR + I+ + N L Y G+
Sbjct: 691 PLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLRNYRSHPTILDIPNQLYYEGE 750
Query: 1255 LQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDH-----DGFQSTSNQQFVE 1309
LQ D + R + + + A P Q I+ H D + S F
Sbjct: 751 LQACADVVDR-------------ERFCRWAGLPRQGFPIIFHGVMGKDEREGNSPSFF-- 795
Query: 1310 QNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLEDL------- 1362
N + + +GV+S Y+ Q+ ++ + L
Sbjct: 796 -NPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDRELRGL 854
Query: 1363 ----DIDVLTADQFQGRDKDCIIISMVRSNPDQASGVL------LRDLRRINVAVSRA 1410
D+ V + ++FQG+++ I+IS VRS+ L L++ +R NVAV+RA
Sbjct: 855 DDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRA 912
>7303245 [A] KOG1804 RNA helicase
Length = 1194
Score = 75.9 bits (185), Expect = 4e-13
Identities = 100/394 (25%), Positives = 166/394 (41%), Gaps = 57/394 (14%)
Query: 1053 LILGMPGTGKTSVICELV-SILVNQGKS-VMVTSYTNSAVDNIIMKLTSRI--------- 1101
++ G PGTGKTS I E + + +N+ ++ ++V + +N+A D + ++L I
Sbjct: 495 IVFGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACDEVALRLLRAIAKAPQSQPR 554
Query: 1102 PRSKMVRLGSGRRVHDLVKPYCITEMLDGDNENLSEIIDAAQVVGVTCLGINDPWLQMR- 1160
P +++ RR+ ++ +L+ N A Q V + I L +
Sbjct: 555 PLTRIFSANCDRRIDNIDDL-----LLEYSNMYTVHFYPAVQAVHQYRIVICTLSLAGKL 609
Query: 1161 -------NGDFDYVILDEAS-QVSLPVAIG---PLRFGYKFILVGDHYQLPPLVKNSFAR 1209
N + +V +DEA+ V +G L IL GDH QL P++++ A
Sbjct: 610 STGGFAANNVYTHVFVDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRAN 669
Query: 1210 DNGLQESLFEKL----CH------SHPQSV-VELQLQYRMNAEIMSLSNVLIYGGKLQCG 1258
+ GL +LFE+L C+ S+ SV L +R + EI+SL N + Y G L+
Sbjct: 670 EWGLGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLR-- 727
Query: 1259 TDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQLSX 1318
+ P C W P I+ H F +T N + + +
Sbjct: 728 --------TEAPMEIVCRFHNWFYL---PNATFPIMFHSVFGTTMNTKSSVSLCNNKEID 776
Query: 1319 XXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLEDLD---IDVLTADQFQGR 1375
L + IG++S YK Q ++ L + ID + + FQG+
Sbjct: 777 VVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQYQRIQEQLNMRNWSQIDCGSVELFQGK 836
Query: 1376 DKDCIIISMVRSNPDQASGVLLRDLRRINVAVSR 1409
+K II+S VRS + L + RR+NV +SR
Sbjct: 837 EKHVIIVSFVRSFTPKLG--FLNNERRLNVLLSR 868
>Hs7661884 [A] KOG1804 RNA helicase
Length = 1942
Score = 75.1 bits (183), Expect = 8e-13
Identities = 68/224 (30%), Positives = 107/224 (47%), Gaps = 24/224 (10%)
Query: 1053 LILGMPGTGKTSVICELVS-ILVNQGKSVMVTSYTNSAVDNIIMK-----LTSRIPRSKM 1106
LI+G GTGKT + + V IL Q +++ +++NSA D I + + P+++
Sbjct: 665 LIIGPYGTGKTFTLAQAVKHILQQQETRILICTHSNSAADLYIKDYLHPYVEAGNPQARP 724
Query: 1107 VRLGSGRR----VHDLVKPYCITEMLDGDNEN-LSEIIDAAQVVGVTCLGINDPW----L 1157
+R+ R VH +V YC+ + E I +VV VT +N L
Sbjct: 725 LRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVT---LNTSQYLCQL 781
Query: 1158 QMRNGDFDYVILDEASQVSLPVAIGPLRFGY---KFILVGDHYQLPPLVKNSFARDNGLQ 1214
+ G F +++LDEA+Q I PL + +L GDH QL P V + FAR+ L
Sbjct: 782 DLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLH 841
Query: 1215 ESLFEKLCHSHPQSV---VELQLQYRMNAEIMSLSNVLIYGGKL 1255
SL ++L +P + L YR + I++ ++ L Y GKL
Sbjct: 842 VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKL 885
>CE05420 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1106
Score = 75.1 bits (183), Expect = 8e-13
Identities = 69/256 (26%), Positives = 113/256 (43%), Gaps = 30/256 (11%)
Query: 1163 DFDYVILDEASQVSLPVAIGPLRF--GYKFILVGDHYQLPPLVKNSFA---RDNGLQESL 1217
D + DEASQV I L F LVGD QLP + +D G+ +++
Sbjct: 746 DVSNIQFDEASQVPEHTLISLLHKFPNASFGLVGDINQLPAYCDDDLQGLLKDYGIGKTM 805
Query: 1218 FEKLCHS-HPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCS 1276
PQS+ L+L YR + + + L Y G+L G ++ +R +
Sbjct: 806 ARASRDKMFPQSI--LRLVYRCHPTTTKILSDLFYNGQLISGVEKNQRDEFM-----RMR 858
Query: 1277 QDTWLQKAINPEQPVVILDH--DGFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLA 1334
D W N P+++L+H DG++ ++ + D +
Sbjct: 859 PDIWP----NSSFPILVLNHEKDGYRMGTSVANNSEKDQ-------VVRIVSLLTKKVKG 907
Query: 1335 HGIEVDQIGVMSMYKAQMSLLKTTLEDLDIDVLTADQFQGRDKDCIIISMVRSNPDQASG 1394
+G+ IG++S YKAQ SLL L+ D+ T D FQG +++ +I+ NP
Sbjct: 908 YGLSESDIGIISFYKAQTSLLADALKKTDVKCGTIDAFQGTEREVMIVCCTNKNP----S 963
Query: 1395 VLLRDLRRINVAVSRA 1410
+ +++ R+NVA+SRA
Sbjct: 964 LFMQEGTRVNVAMSRA 979
>At1g65780 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1065
Score = 75.1 bits (183), Expect = 8e-13
Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 49/266 (18%)
Query: 1167 VILDEASQV-----SLPVAIGPLRFGYKFILVGDHYQLPPLVKNSFARDNGLQESLFEKL 1221
+++DEA+Q+ S+P+ + LR ILVGD QLP +V++ A + G SLFE+L
Sbjct: 567 LVIDEAAQLKECESSIPMQLPGLRH---LILVGDERQLPAMVESQIALEAGFGRSLFERL 623
Query: 1222 CHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGK-LQCGTDEIRRQVLQFPNNYKCSQDTW 1280
+ + L +QYRM+ I S N +YG K L T R Q+ ++
Sbjct: 624 ALLGHKKYM-LNIQYRMHCSISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSF 682
Query: 1281 LQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVD 1340
+ A E+ + +G +N + V ++A+ ++V
Sbjct: 683 INIAYGREE---YGEGEGRSLKNNVEVV-------------------VVAAIIANLLQVS 720
Query: 1341 Q-------IGVMSMYKAQMSLLKTTLEDLDID---------VLTADQFQGRDKDCIIISM 1384
+ +GV+S YKAQ+ ++ +++ I + T D FQG ++D II+S
Sbjct: 721 EKTKTRINVGVISPYKAQVIAIQEKIQETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVST 780
Query: 1385 VRSNPDQASGVLLRDLRRINVAVSRA 1410
VRSN G L + RR NV ++RA
Sbjct: 781 VRSNGVGRVG-FLGNRRRTNVLLTRA 805
>At5g37150 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 839
Score = 74.7 bits (182), Expect = 1e-12
Identities = 115/502 (22%), Positives = 213/502 (41%), Gaps = 60/502 (11%)
Query: 941 LNEKQSLTNSHRYRIDK-----NESATGLTLARYNLLNLFLPEVL--IEAEFSPQKSG-E 992
L ++ S + + YR+ N G+ + LL++FL E + + FSP +
Sbjct: 293 LFKENSTSENATYRLGNIILSGNRDRMGIHKNDHVLLDVFLDERIGKLGKLFSPFSGWMQ 352
Query: 993 KLQLPVKXXXXXXXXXXXXIVELSEPKWTTHAAR-------IPTLNDSFNENQKMAIERS 1045
+L+ ++ + EL E + A IPT+ + +N E
Sbjct: 353 RLESLIQFLENPEGKYERHVYELEEVERMEEEAERQEVVVNIPTIGEFVKKNFNSLSEEV 412
Query: 1046 LTCRDYNLILGMPGTGKTSVICELVSILVNQGKSVMVTSY----TNSAVDNIIMKLTSRI 1101
TC +L +P K + + V I++ +S+ Y +S VD + R
Sbjct: 413 ETCI-VDLFTHLP---KVYLPYDDVKIMIASRQSLQRIRYFLRENSSRVD--FEEGNFRF 466
Query: 1102 PRSKMVRLGSGRRVHDLVKPYCITEMLDGDNENLSEI-IDAAQVVGVTCLGINDPWLQMR 1160
K + + + + L K + I +ML+ NE++ + + A ++ T G + ++ R
Sbjct: 467 DCFKRLSVDCLKALRLLPKRFEIPDMLE--NEDIRKFCLQNADIILCTASGAAEMNVE-R 523
Query: 1161 NGDFDYVILDEASQVSLPVAIGPLRF-GYKF-ILVGDHYQLPPLVKNSFARDNGLQESLF 1218
G+ + +++DEA+Q+ ++ L+ G + IL+GD +QLP +V N SLF
Sbjct: 524 TGNVELLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLF 583
Query: 1219 EKL-CHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQ 1277
E+L H + + L +QYRM+ I N YGG+++ + ++ + Q
Sbjct: 584 ERLVLLGHNKHL--LDVQYRMHPSISRFPNKEFYGGRIK-DAENVKESIY---------Q 631
Query: 1278 DTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGI 1337
+LQ + + + ++F + + + +
Sbjct: 632 KRFLQGNMFGSFSFINV------GRGKEEFGDGHSPKNMVEVAVVSEIISNLFKVSCERR 685
Query: 1338 EVDQIGVMSMYKAQMSLLKTTLED---------LDIDVLTADQFQGRDKDCIIISMVRSN 1388
+GV+S YK QM ++ + D ++V + D FQG ++D IIIS VRSN
Sbjct: 686 MKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSN 745
Query: 1389 PDQASGVLLRDLRRINVAVSRA 1410
+ G L + +R NVA++RA
Sbjct: 746 SNGKVG-FLNNRQRANVALTRA 766
>At5g52090 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 676
Score = 72.4 bits (176), Expect = 5e-12
Identities = 77/308 (25%), Positives = 141/308 (45%), Gaps = 39/308 (12%)
Query: 1118 LVKPYCITEMLDGDNENLSEI-IDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVS 1176
L K + I +ML+ NE++ + + A ++ T G + ++ R G+ + +++DEA+Q+
Sbjct: 320 LPKRFEIPDMLE--NEDIRKFCLQNADIILCTASGAAEMNVE-RTGNVELLVVDEAAQLK 376
Query: 1177 LPVAIGPLRF-GYKF-ILVGDHYQLPPLVKNSFARDNGLQESLFEKL-CHSHPQSVVELQ 1233
++ L+ G + IL+GD +QLP +V N SLFE+L H + + L
Sbjct: 377 ECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHL--LD 434
Query: 1234 LQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVI 1293
+QYRM+ I N YGG+++ + ++ + Q ++ + +
Sbjct: 435 VQYRMHPSISRFPNKEFYGGRIK-DAENVKESIYQ-------------KRFLKGN----M 476
Query: 1294 LDHDGFQST--SNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQ 1351
D F + ++F + + + + +GV+S YK Q
Sbjct: 477 FDSFSFINVGRGKEEFGDGHSPKNMVEVAVISEIISNLYKVSCERRMKVSVGVVSPYKGQ 536
Query: 1352 MSLLKTTLED---------LDIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRR 1402
M ++ + D ++V + D FQG ++D IIIS VRSN + G L + +R
Sbjct: 537 MRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVG-FLNNRQR 595
Query: 1403 INVAVSRA 1410
NVA++RA
Sbjct: 596 ANVALTRA 603
>At4g05540 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 660
Score = 70.5 bits (171), Expect = 2e-11
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 31/263 (11%)
Query: 1160 RNGDFDYVILDEASQVSLPVAIGPLRFG--YKFILVGDHYQLPPLVKNSFARDNGLQESL 1217
R G D +++DEA+Q+ ++ L+ + +L+GD QLP +V++ SL
Sbjct: 398 RAGSIDMLVVDEAAQLKECESVAALQLQGLHHAVLIGDELQLPAMVQSEVCEKAKFVRSL 457
Query: 1218 FEKL-CHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCS 1276
FE+L H + + L +QYRM+ I N+ YGGK+ EI ++
Sbjct: 458 FERLDSLGHKKHL--LNVQYRMHPSISLFPNMEFYGGKI--SDAEIVKE--------STY 505
Query: 1277 QDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHG 1336
Q +LQ + + + ++F + + + + +
Sbjct: 506 QKRFLQGNMFGSFSFINV------GLGKEEFGDGHSPKNMVEIAVVSEILTNLLKVSSET 559
Query: 1337 IEVDQIGVMSMYKAQMSLLKTTLED---------LDIDVLTADQFQGRDKDCIIISMVRS 1387
+GV+S YKAQ+S ++ + D ++V + D FQG ++D IIIS VRS
Sbjct: 560 KTKMSVGVISPYKAQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRS 619
Query: 1388 NPDQASGVLLRDLRRINVAVSRA 1410
N + G L + +R NVA++RA
Sbjct: 620 NCNGNIG-FLSNRQRANVALTRA 641
>7295157 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1417
Score = 65.9 bits (159), Expect = 5e-10
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 56/267 (20%)
Query: 1164 FDYVILDEASQVSLPVAIGPLRFGYK-FILVGDHYQLPPLVKNSFARDNGLQESLFEKL- 1221
FD I+DEA+Q + P + P+RFG +LVGD QLP +V + A D GL S+F+++
Sbjct: 1126 FDICIVDEATQCTEPWTLLPMRFGLTHMVLVGDMQQLPAVVLSKKAIDFGLSNSMFDRIQ 1185
Query: 1222 ------------CHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQF 1269
H + +L QYRM+ EI N Y +L
Sbjct: 1186 RSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYEDQL-------------- 1231
Query: 1270 PNNYKCSQDTWLQKAINPEQPVVIL------DHDGFQSTSNQQFVEQNDHGQLSXXXXXX 1323
N +C+ + +P P ++ D +G Q+ S + N+ +
Sbjct: 1232 -INAECT-----ARFASPLIPYCVINLKYTCDSNGAQNKS----ISNNEEARFVAKLLTE 1281
Query: 1324 XXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTL-EDLDIDVLTADQFQGRDKDCIII 1382
++G+ +S Y+ Q L + ++I T D +QG +KD III
Sbjct: 1282 MDKHMPSKRFSYGL-------ISPYQNQCYALSQVIPSHMNITPQTVDSYQGLEKDVIII 1334
Query: 1383 SMVRSNPDQASGVLLRDLRRINVAVSR 1409
S R+ + G L + +R+NVA++R
Sbjct: 1335 SNART---RGCG-FLTNYQRLNVALTR 1357
>CE27795 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1553
Score = 64.7 bits (156), Expect = 1e-09
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 39/256 (15%)
Query: 1167 VILDEASQVSLPVAIGPLRF--GYKFILVGDHYQLPPLVKNS-------FARDNGLQESL 1217
V +DEASQ++ +G L+ F L+GD +QLPP + F N ++ ++
Sbjct: 1206 VQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTMERAI 1265
Query: 1218 FEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQ 1277
EK+ V L+ YR + + L + L Y G L G E+ R +
Sbjct: 1266 KEKMF-----PVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRD----- 1315
Query: 1278 DTWLQKAINPEQPVVILDHDGFQS---TSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLA 1334
D W NP+ P++ +++ G + TS E++ G++
Sbjct: 1316 DFWP----NPKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPR--------- 1362
Query: 1335 HGIEVDQIGVMSMYKAQMSLLKTTLEDLDIDVLTADQFQGRDKDCIIISMVRSNPDQASG 1394
+ + IGV+S Y AQ S+L L + T D FQG +K+ II+ + ++
Sbjct: 1363 NPVNPSDIGVISFYSAQTSILTEHLRGSGVKCGTVDAFQGSEKEIIIM----CSTNERIS 1418
Query: 1395 VLLRDLRRINVAVSRA 1410
++ R+NVA+SRA
Sbjct: 1419 DFMQLSNRLNVAMSRA 1434
>CE01466 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1551
Score = 64.7 bits (156), Expect = 1e-09
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 39/256 (15%)
Query: 1167 VILDEASQVSLPVAIGPLRF--GYKFILVGDHYQLPPLVKNS-------FARDNGLQESL 1217
V +DEASQ++ +G L+ F L+GD +QLPP + F N ++ ++
Sbjct: 1206 VQIDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTMERAI 1265
Query: 1218 FEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQ 1277
EK+ V L+ YR + + L + L Y G L G E+ R +
Sbjct: 1266 KEKMF-----PVCTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRD----- 1315
Query: 1278 DTWLQKAINPEQPVVILDHDGFQS---TSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLA 1334
D W NP+ P++ +++ G + TS E++ G++
Sbjct: 1316 DFWP----NPKFPMMFVNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPR--------- 1362
Query: 1335 HGIEVDQIGVMSMYKAQMSLLKTTLEDLDIDVLTADQFQGRDKDCIIISMVRSNPDQASG 1394
+ + IGV+S Y AQ S+L L + T D FQG +K+ II+ + ++
Sbjct: 1363 NPVNPSDIGVISFYSAQTSILTEHLRGSGVKCGTVDAFQGSEKEIIIM----CSTNERIS 1418
Query: 1395 VLLRDLRRINVAVSRA 1410
++ R+NVA+SRA
Sbjct: 1419 DFMQLSNRLNVAMSRA 1434
>At5g37030 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 638
Score = 63.2 bits (152), Expect = 3e-09
Identities = 95/425 (22%), Positives = 168/425 (39%), Gaps = 83/425 (19%)
Query: 1031 NDSFNENQKMAIERSLTCRDYN---LILGMPGTGKTSVICELVSILVNQGKSVMVTSYTN 1087
+ N +Q+ AI L RD N + + G KT + L+ +L+ +V + TN
Sbjct: 201 SSKLNSSQEAAILSCLETRDSNHKNSVKLIWGPLKTKTVATLLLVLLKLRCKTVVCAPTN 260
Query: 1088 SAVDNIIMKLTSRIPR---------SKMVRLGSGRRVHDLVKPYCITEMLD--------- 1129
+A+ + +L + + + G+ +R+ Y LD
Sbjct: 261 TAIVEVTSRLLALSNKYSEHATYGLGNIFLAGNQKRMRIKDTDYLRNVFLDHRISKLRKL 320
Query: 1130 -----GDNENLSEIIDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPL 1184
G ++L IID + + + G+ + +++DEA+Q+ ++ L
Sbjct: 321 FLSTCGWKQSLESIIDLLENT------------ETKTGNIEVLVVDEAAQLKECESVAAL 368
Query: 1185 RF-GYKF-ILVGDHYQLPPLVKNSFARDNGLQESLFEKL-CHSHPQSVVELQLQYRMNAE 1241
+ G + IL+GD +QLP +V N SLFE+L H + + L +QYRM+
Sbjct: 369 QLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERLVLLGHKKHL--LDVQYRMHPS 426
Query: 1242 IMSLSNVLIYGGKLQCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQS 1301
I YGG+++ + Q++ QK L + F S
Sbjct: 427 ISRFPYKEFYGGRIKDAAN---------------VQESIYQKR--------FLQGNMFGS 463
Query: 1302 TSNQQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSM-------YKAQMSL 1354
S + ++++ +V + M M YK Q+
Sbjct: 464 FSFINVGRGKEEFGDGDSPKNMVEVAVVSEIISNLFKVSRERKMKMSVGVITPYKGQVRA 523
Query: 1355 LKTTLED---------LDIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRINV 1405
++ + D ++V + D FQG ++D IIIS VRSN + G L + +R NV
Sbjct: 524 IQERIRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVG-FLSNRQRANV 582
Query: 1406 AVSRA 1410
A++RA
Sbjct: 583 ALTRA 587
>Hs21703358_3 [A] KOG1804 RNA helicase
Length = 498
Score = 62.8 bits (151), Expect = 4e-09
Identities = 75/290 (25%), Positives = 123/290 (41%), Gaps = 37/290 (12%)
Query: 1139 IDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPL-RF--GYKFILVGD 1195
+D +V+ TC L++ D +++DEA + P + PL +F K +L+GD
Sbjct: 180 LDRHEVILCTCSCAASASLKIL--DVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGD 237
Query: 1196 HYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKL 1255
H QL P+VKN ++ GL SLFE+ + + L QYRM+ I + +V Y KL
Sbjct: 238 HKQLRPVVKNERLQNLGLDRSLFER----YHEDAHMLDTQYRMHEGICAFPSVAFYKSKL 293
Query: 1256 QCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQ 1315
+ Q L+ P + L A PV+ G + + E N++ +
Sbjct: 294 KTW------QGLRRPPSV-------LGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSK 340
Query: 1316 LSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLED---LDIDVLTADQF 1372
+ L +E I V++ Y AQ S + L + V + +
Sbjct: 341 ANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKS 400
Query: 1373 QGRDKDCIIISMVR----SNPDQASGV--------LLRDLRRINVAVSRA 1410
QG + +++S VR S+ DQ + D ++NVAV+RA
Sbjct: 401 QGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRA 450
>Hs14769950_3 [A] KOG1804 RNA helicase
Length = 498
Score = 62.8 bits (151), Expect = 4e-09
Identities = 75/290 (25%), Positives = 123/290 (41%), Gaps = 37/290 (12%)
Query: 1139 IDAAQVVGVTCLGINDPWLQMRNGDFDYVILDEASQVSLPVAIGPL-RF--GYKFILVGD 1195
+D +V+ TC L++ D +++DEA + P + PL +F K +L+GD
Sbjct: 180 LDRHEVILCTCSCAASASLKIL--DVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGD 237
Query: 1196 HYQLPPLVKNSFARDNGLQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKL 1255
H QL P+VKN ++ GL SLFE+ + + L QYRM+ I + +V Y KL
Sbjct: 238 HKQLRPVVKNERLQNLGLDRSLFER----YHEDAHMLDTQYRMHEGICAFPSVAFYKSKL 293
Query: 1256 QCGTDEIRRQVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQ 1315
+ Q L+ P + L A PV+ G + + E N++ +
Sbjct: 294 KTW------QGLRRPPSV-------LGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSK 340
Query: 1316 LSXXXXXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTLED---LDIDVLTADQF 1372
+ L +E I V++ Y AQ S + L + V + +
Sbjct: 341 ANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKS 400
Query: 1373 QGRDKDCIIISMVR----SNPDQASGV--------LLRDLRRINVAVSRA 1410
QG + +++S VR S+ DQ + D ++NVAV+RA
Sbjct: 401 QGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRA 450
>CE07357 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 602
Score = 61.2 bits (147), Expect = 1e-08
Identities = 71/289 (24%), Positives = 122/289 (41%), Gaps = 43/289 (14%)
Query: 1137 EIIDAAQVVGVTC---LGINDPWLQMRNGDFDYVILDEASQVSLPV--AIGPLRFGYKFI 1191
++ D ++G L N P L FD +DEASQ++L V ++ L + I
Sbjct: 285 KLYDPQLIIGTAAAIQLAFNQPDLAEIKDLFDITFIDEASQLALYVLGSLATLLPKTRII 344
Query: 1192 LVGDHYQLPPLVKNSFARDNGLQESLFEKLC---HSHPQSVVELQLQYRMNAEIMSLSNV 1248
LVGD +QLPP +++ + + ++ E L S + L +R I L
Sbjct: 345 LVGDMHQLPPYTEDALPAELK-RAAVGEPLTLAVKGRRWSSMHLTRVHRCPKMITDLLGA 403
Query: 1249 LIYGGKLQCGTDEIRR----QVLQFPNNYKCSQDTWLQKAINPEQPVVILDHDGFQSTSN 1304
+ YG L + R + ++ P+++ P V +++ Q+
Sbjct: 404 VFYGNTLTSTRKAVNRVPILEAMELPSHH----------------PFVFVNYISQQTQVG 447
Query: 1305 QQFVEQNDHGQLSXXXXXXXXXXXXXXLLAHGIEVD---QIGVMSMYKAQMSLLKTTLED 1361
+ F +N+ L H E + + V++ Y AQ S + + ED
Sbjct: 448 KSFSNENE---------ARYALQLVTALKRHAREQNTTVSVAVLNFYGAQYSYVYSIAED 498
Query: 1362 LDIDVLTADQFQGRDKDCIIISMVRSNPDQASGVLLRDLRRINVAVSRA 1410
+ V T D QG++ D I+ + RS+P + S L+ RINVA+SR+
Sbjct: 499 -GVRVNTIDGCQGQEYDVSIVLLTRSDPYEKSKFLVNP-NRINVALSRS 545
>At4g15570 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 525
Score = 61.2 bits (147), Expect = 1e-08
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 34/200 (17%)
Query: 1080 VMVTSYTNSAVDNIIMKLTSRIPRS--------KMVRLG----------------SGRRV 1115
V+V + +NSA+D I+++L S R K+VR+G + +R
Sbjct: 80 VLVCAPSNSALDEIVLRLLSSGLRDENAQTYTPKIVRIGLKAHHSVASVSLDHLVAQKRG 139
Query: 1116 HDLVKPYCITEMLDGDNENLSEIIDAAQVVG--------VTCLGINDPWLQMRNGDFDYV 1167
+ KP T D D+ + + +AA V G T L N FD V
Sbjct: 140 SAIDKPKQGTTGTDIDSIRTAILEEAAIVWGFNFRINVFATLSFSGSALLAKSNRGFDVV 199
Query: 1168 ILDEASQVSLPVAIGPLRFGYKFI-LVGDHYQLPPLVKNSFARDNGLQESLFEKLCHSHP 1226
I+DEA+Q P + PL K + LVGD QLP V ++ A+D+G S+FE+L
Sbjct: 200 IIDEAAQAVEPATLIPLATRCKQVFLVGDPKQLPATVISTVAQDSGYGTSMFERL-QKAG 258
Query: 1227 QSVVELQLQYRMNAEIMSLS 1246
V L+ QYRM+ E++ +S
Sbjct: 259 YPVKMLKTQYRMHPELIPIS 278
>CE18803 [L] KOG1803 DNA helicase
Length = 646
Score = 60.1 bits (144), Expect = 3e-08
Identities = 88/400 (22%), Positives = 149/400 (37%), Gaps = 73/400 (18%)
Query: 1056 GMPGTGKTSVICELVSILVNQGKSVMVTSYTNSAVDNIIMKLTSRIPRSKMVRLGSGRRV 1115
G PGTGKT + L+S V K ++V + T ++NI + M +LG
Sbjct: 120 GAPGTGKTYTLTLLISCAVKLKKQIVVLAPTFETLENI-----KNMATRTMEKLGIKCSD 174
Query: 1116 HDLVKPYCITEMLDGDNENLSEIIDAAQVVGVTCLGINDPWL----QMRNGDFDYVILDE 1171
+ + ++D + ++I VV T I +L + D + I+DE
Sbjct: 175 NVFMSTSQYINLIDTEPLQKEDMIGNVLVVLAT---IGADFLNFVAKQEALDPSFCIIDE 231
Query: 1172 ASQVSLPVAIGPLRFGYKFILVGDHYQLPPLVKNSFARDNGLQESLFEKLC--------- 1222
A V + F++ GD +L P + N DNG F + C
Sbjct: 232 AGLVMASETWPDVYKSKGFVIAGDPNELFPQIYN---HDNG--NGFFNQFCCLEQKRLET 286
Query: 1223 ----------HSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNN 1272
+ S + L QYR N IM+ SN Y K++ +
Sbjct: 287 QVSILDCINEKTENLSPIILDTQYRSNETIMAWSNACFYNPKVK--------------TD 332
Query: 1273 YKCSQDT----WLQKAINP-EQPVVILDHDGFQSTSNQQ-------FVEQNDHGQLSXXX 1320
+KC T + NP P VI+D + + F N++ +
Sbjct: 333 FKCGSLTLRSFFKGSKFNPLFHPFVIVDTSCEKEMEKRNETFEYLVFNNNNENEGYANVA 392
Query: 1321 XXXXXXXXXXXLLAHGIEVDQIGVMSMYKAQMSLLKTTL----------EDLDIDVLTAD 1370
LL ++ I +++ Y+ Q +++ + + D V D
Sbjct: 393 EAKIAMHHYKQLLKLKVQASDIAIITPYRGQSHVVRQMMRKFANEESRSDCFDTHVGDVD 452
Query: 1371 QFQGRDKDCIIISMVRSNPDQASGVLLRDLRRINVAVSRA 1410
+ G++ D +I +MVRSNP G D RR++V +++A
Sbjct: 453 KIVGKEFDVVIFTMVRSNPKLDMG-KAGDPRRLHVIITKA 491
>7301121 [L] KOG1807 Helicases
Length = 903
Score = 54.7 bits (130), Expect = 1e-06
Identities = 26/69 (37%), Positives = 48/69 (68%), Gaps = 6/69 (8%)
Query: 1035 NENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVNQGKS-----VMVTSYTNSA 1089
NE+QK A + +L CR++++I G PGTGKT + +LV+ L+ K+ ++V +YTN++
Sbjct: 451 NESQKTAFKEAL-CREFSIIQGPPGTGKTHLSVQLVNSLIQNAKALGTGPIIVLTYTNNS 509
Query: 1090 VDNIIMKLT 1098
+D ++K++
Sbjct: 510 LDKFLVKIS 518
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,847,860
Number of Sequences: 60738
Number of extensions: 3407480
Number of successful extensions: 10083
Number of sequences better than 1.0e-05: 49
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 9847
Number of HSP's gapped (non-prelim): 124
length of query: 1445
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1326
effective length of database: 23,161,394
effective search space: 30712008444
effective search space used: 30712008444
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)