ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactI1474 good C KOG2799 Energy production and conversion Succinyl-CoA synthetase, beta subunit

Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactI1474 503729  504994 422  
         (422 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   
Score E Sequences producing significant alignments: (bits) Value YGR244c [C] KOG2799 Succinyl-CoA synthetase beta subunit 576 e-164 SPCC1620.08 [C] KOG2799 Succinyl-CoA synthetase beta subunit 419 e-117 At2g20420 [C] KOG2799 Succinyl-CoA synthetase beta subunit 402 e-112 CE03351 [C] KOG2799 Succinyl-CoA synthetase beta subunit 390 e-108 7299109 [C] KOG2799 Succinyl-CoA synthetase beta subunit 377 e-104 Hs11321583_2 [C] KOG2799 Succinyl-CoA synthetase beta subunit 370 e-102 7295455 [C] KOG1447 GTP-specific succinyl-CoA synthetase beta su... 341 1e-93 Hs22041509 [C] KOG1447 GTP-specific succinyl-CoA synthetase beta... 339 5e-93 CE04242 [C] KOG1447 GTP-specific succinyl-CoA synthetase beta su... 328 7e-90 Hs22055770 [C] KOG1447 GTP-specific succinyl-CoA synthetase beta... 300 4e-81 Hs22056553 [C] KOG2799 Succinyl-CoA synthetase beta subunit 211 2e-54 At1g10670 [C] KOG1254 ATP-citrate lyase 76 1e-13 At1g60810 [C] KOG1254 ATP-citrate lyase 72 1e-12 At1g09430 [C] KOG1254 ATP-citrate lyase 60 5e-09 Hs20533572 [C] KOG2799 Succinyl-CoA synthetase beta subunit 59 1e-08 CE06997 [C] KOG1254 ATP-citrate lyase 57 5e-08 CE07719 [C] KOG1254 ATP-citrate lyase 57 7e-08 >YGR244c [C] KOG2799 Succinyl-CoA synthetase beta subunit Length = 427 Score = 576 bits (1484), Expect = e-164 Identities = 290/402 (72%), Positives = 341/402 (84%), Gaps = 1/402 (0%) Query: 21 QQVRNLSIHEYRSAELLRQYGVGTPKGAAAHTVDEATKIAKELGGKNLVVKAQALTGGRG 80 Q R+LSIHEYRSA+LLR+YG+GTP+G A T +EA + AK+L LV+KAQALTGGRG Sbjct: 26 QARRHLSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRG 85 Query: 81 KGHFDNGMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIVERVNAKHEA 140 KGHFD G +SG+HMI+S Q A +V+ +ML ++LITKQ+GI GK VS VYIV+RV+ KHEA Sbjct: 86 KGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEA 145 Query: 141 YLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAEIAASLG 200 YLSILMDR+TKKP+II SS+GGMNIE+VA+ PDAIKKF +E S GL+P+ A ++A SLG Sbjct: 146 YLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLG 205 Query: 201 FSKEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVL-DQDKKVMCMDAKFGFDDNASFR 259 FS +A+ +A AV LYKIF E+DATQ+EINPLSE+ D K+MC DAKFGFDDNASFR Sbjct: 206 FSPDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFR 265 Query: 260 QKDVYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIKLYGGDPAN 319 Q+ +YSWRDL+QEDPDEV AKK DLNFVKLKGNIGCLVNGAGLAMATMDVIKL GGDPAN Sbjct: 266 QEKIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPAN 325 Query: 320 FLDCGGGATPETIETAFKLILSNDNVDAIFVNIFGGIVRCDFVAQGLVAATKNLSVKVPI 379 FLDCGGGATPETI+ F+LILSN NVDAIFVNIFGGIVRCD+VA GLV A + L V+VPI Sbjct: 326 FLDCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPI 385 Query: 380 VARLQGTNLEQGRRIIAESGLKIYSFDELDPAAEKVVELTNS 421 VARLQGT +E+GR II +SG+KIYSFDELDPAA+KVVELT + Sbjct: 386 VARLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVELTQN 427 >SPCC1620.08 [C] KOG2799 Succinyl-CoA synthetase beta subunit Length = 433 Score = 419 bits (1076), Expect = e-117 Identities = 207/393 (52%), Positives = 281/393 (70%), Gaps = 2/393 (0%) Query: 22 QVRNLSIHEYRSAELLRQYGVGTPKGAAAHTVDEATKIAKELGGKNLVVKAQALTGGRGK 81 Q RNL++HEY S ++LR++GV P+GA A + +EA K+A++L +LVVKAQ L GGRGK Sbjct: 19 QKRNLALHEYISHDILRKFGVDVPRGAPARSGEEAEKVARDLKVTDLVVKAQVLAGGRGK 78 Query: 82 GHFDNGMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIVERVNAKHEAY 141 G FD+G++ G+ + +A + +M+G+ LIT+Q+G GK+ + VY+ ER + E Y Sbjct: 79 GQFDSGLRGGVRPVYDATEARMFAEQMIGHKLITRQTGPAGKICNVVYVCERKFIRKEYY 138 Query: 142 LSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAEIAASLGF 201 +ILMDR+ + P+I+ S +GG++IE VA NP AI K + +S L P A E+ LGF Sbjct: 139 FAILMDRENQCPMIVASDQGGVDIETVAAENPSAIIKRSLPNSPNLDPHIAEELVDKLGF 198 Query: 202 SKEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDKKVMCMDAKFGFDDNASFRQK 261 S ++ A DA++KLYK+F + DATQ+EINPL+E D KV+CMDAK FDDNA FR Sbjct: 199 SSSSKPKAVDAIVKLYKVFNDCDATQVEINPLAETTDH--KVLCMDAKLNFDDNAEFRHS 256 Query: 262 DVYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIKLYGGDPANFL 321 +++ RD++QEDPDE A K LNF+KL GNIGCLVNGAGLAMATMD+IKL+GG+PANFL Sbjct: 257 NIFVLRDISQEDPDEARAAKVGLNFIKLDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 316 Query: 322 DCGGGATPETIETAFKLILSNDNVDAIFVNIFGGIVRCDFVAQGLVAATKNLSVKVPIVA 381 D GG A E I AF LI ++ AIFVNIFGGIVRCD +A+GL++ L++ +PI+ Sbjct: 317 DVGGNANAEAIREAFSLITNDPKTTAIFVNIFGGIVRCDVIAKGLISVVSALNLNIPIIC 376 Query: 382 RLQGTNLEQGRRIIAESGLKIYSFDELDPAAEK 414 RLQGTN + +I SGL+I+SFD+LD AA+K Sbjct: 377 RLQGTNQGAAKEVINNSGLRIFSFDDLDEAAKK 409 >At2g20420 [C] KOG2799 Succinyl-CoA synthetase beta subunit Length = 421 Score = 402 bits (1034), Expect = e-112 Identities = 202/399 (50%), Positives = 286/399 (71%), Gaps = 5/399 (1%) Query: 21 QQVRNLSIHEYRSAELLRQYGVGTPKGAAAHTVDEATKIAKEL--GGKNLVVKAQALTGG 78 QQ+R L+IHEY+ AEL+ +YGV PKG AA +++E K +++ LVVK+Q L GG Sbjct: 22 QQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGG 81 Query: 79 RGKGHFDNGMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIVERVNAKH 138 RG G F +G++ G+H++ +A E++GKMLG L+TKQ+G +GK+VS VY+ E+++ + Sbjct: 82 RGLGTFKSGLKGGVHIVKR-DEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVN 140 Query: 139 EAYLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAEIAAS 198 E Y SI++DRK+ PLII +GG +IED+A+ PD I K ++ G+T E AA++ Sbjct: 141 EMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDG 200 Query: 199 LGFSKEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDKKVMCMDAKFGFDDNASF 258 L D+ + V KLY++F++ D T +EINPL+E +++ DAK FDDNA+F Sbjct: 201 LAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAET--STNQLVAADAKLNFDDNAAF 258 Query: 259 RQKDVYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIKLYGGDPA 318 RQK+V++ RD TQEDP EV A K DLN++ L G IGC+VNGAGLAMATMD+IKL+GG PA Sbjct: 259 RQKEVFAMRDPTQEDPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPA 318 Query: 319 NFLDCGGGATPETIETAFKLILSNDNVDAIFVNIFGGIVRCDFVAQGLVAATKNLSVKVP 378 NFLD GG A+ + AFK++ S+D V AI VNIFGGI++CD +A G+V A K +++KVP Sbjct: 319 NFLDVGGNASEHQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVP 378 Query: 379 IVARLQGTNLEQGRRIIAESGLKIYSFDELDPAAEKVVE 417 +V RL+GTN+EQG+RI+ ESG+K+ + D+LD AAEK V+ Sbjct: 379 VVVRLEGTNVEQGKRILKESGMKLITADDLDDAAEKAVK 417 >CE03351 [C] KOG2799 Succinyl-CoA synthetase beta subunit Length = 435 Score = 390 bits (1003), Expect = e-108 Identities = 197/410 (48%), Positives = 277/410 (67%), Gaps = 3/410 (0%) Query: 12 LHKSSSVVRQQVRNLSIHEYRSAELLRQYGVGTPKGAAAHTVDEATKIAKELGGKNLVVK 71 L+ S + R L +HE+ ++L+ Y + P A + A AK +GGK+ VVK Sbjct: 10 LNTSQKFMAPAARTLMLHEHHGMKILQNYEIKVPPFGVAQDAETAFSEAKRIGGKDYVVK 69 Query: 72 AQALTGGRGKGHFDNGMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIV 131 AQ L GGRGKG F +G+Q G+ ++ + + + +G M+G +LITKQ+ +GK V + Sbjct: 70 AQVLAGGRGKGRFSSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKKCEEVMVC 129 Query: 132 ERVNAKHEAYLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPET 191 +R+ + E Y SI +DR T P++I SS+GG+NIE+VA TNPDAI K ++ +VG+T E Sbjct: 130 KRLFTRREYYFSITLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGITKEL 189 Query: 192 AAEIAASLGFSKEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDKKVMCMDAKFG 251 A EIA +GFSK+ E A + + KLY++FK DAT +EINP++E ++ D V CMD K Sbjct: 190 AHEIAVKMGFSKDCEQQASEIIEKLYQMFKGSDATLVEINPMAEDVNGD--VYCMDCKLL 247 Query: 252 FDDNASFRQKDVYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIK 311 D NA FRQ ++ +D QED E+ A ++LN+++L G IGC+VNGAGLAMATMD+IK Sbjct: 248 LDSNAEFRQAKLFDLKDKKQEDELEIRAAAANLNYIRLDGTIGCMVNGAGLAMATMDIIK 307 Query: 312 LYGGDPANFLDCGGGATPETIETAFKLILSN-DNVDAIFVNIFGGIVRCDFVAQGLVAAT 370 L+GG+PANFLD GGGAT E + AFK+I ++ D V AI VNIFGGI+RCD +AQG++ A Sbjct: 308 LHGGEPANFLDVGGGATVEQVTEAFKIITADKDKVSAILVNIFGGIMRCDVIAQGIIQAA 367 Query: 371 KNLSVKVPIVARLQGTNLEQGRRIIAESGLKIYSFDELDPAAEKVVELTN 420 + L +K+PIV RLQGT +E + +IA S L+I D LD AA+ VV+L+N Sbjct: 368 RELDLKIPIVVRLQGTKVEDAKALIATSQLRILPCDNLDEAAKMVVKLSN 417 >7299109 [C] KOG2799 Succinyl-CoA synthetase beta subunit Length = 465 Score = 377 bits (967), Expect = e-104 Identities = 193/398 (48%), Positives = 269/398 (67%), Gaps = 2/398 (0%) Query: 21 QQVRNLSIHEYRSAELLRQYGVGTPKGAAAHTVDEATKIAKELGGKNLVVKAQALTGGRG 80 QQ+RNL++ E+ S LL + + TP+ A A EA IA +L NLV+KAQ L GGRG Sbjct: 33 QQLRNLNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRG 92 Query: 81 KGHFDNGMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIVERVNAKHEA 140 KG F NG++ G+ ++ Q A E+S KM+ L+TKQ+G G++ V + ER + E Sbjct: 93 KGTFKNGLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREF 152 Query: 141 YLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAEIAASLG 200 Y +++M+R P++I S EGG++IE+VA ++PDAI ++ GLT E A +I +G Sbjct: 153 YFAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVG 212 Query: 201 FSKEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDKKVMCMDAKFGFDDNASFRQ 260 + E +L LY +F +KDA +EINP +E D +DAK FDDNA FRQ Sbjct: 213 LGGDGEDTHVQMLLNLYDLFVKKDALLVEINPYAE--DAMSGFFALDAKLRFDDNAEFRQ 270 Query: 261 KDVYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIKLYGGDPANF 320 K++++ RD TQEDP EV A K +LN++ L G IGC+VNGAGLAMATMD+IKLYGG+PANF Sbjct: 271 KELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANF 330 Query: 321 LDCGGGATPETIETAFKLILSNDNVDAIFVNIFGGIVRCDFVAQGLVAATKNLSVKVPIV 380 LD GGGAT E ++ AFK+I S+ V I VNIFGGI+RCD +A+G+++ATK+L++ +P+V Sbjct: 331 LDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVV 390 Query: 381 ARLQGTNLEQGRRIIAESGLKIYSFDELDPAAEKVVEL 418 RLQGT +++ R +I SGLKI + D+LD AA+ V L Sbjct: 391 VRLQGTKVKEARELIRTSGLKILARDDLDKAADLAVHL 428 >Hs11321583_2 [C] KOG2799 Succinyl-CoA synthetase beta subunit Length = 385 Score = 370 bits (951), Expect = e-102 Identities = 187/366 (51%), Positives = 260/366 (70%), Gaps = 2/366 (0%) Query: 54 DEATKIAKELGGKNLVVKAQALTGGRGKGHFDNGMQSGIHMIDSVQDATEVSGKMLGYHL 113 DEA IAK+LG K++V+KAQ L GGRGKG F++G++ G+ ++ S ++A VS +M+G L Sbjct: 3 DEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKL 62 Query: 114 ITKQSGIKGKLVSGVYIVERVNAKHEAYLSILMDRKTKKPLIICSSEGGMNIEDVAKTNP 173 TKQ+G KG++ + V + ER + E Y +I M+R + P++I SS GG+NIEDVA +P Sbjct: 63 FTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESP 122 Query: 174 DAIKKFYVEDSVGLTPETAAEIAASLGFSKEAEADAKDAVLKLYKIFKEKDATQIEINPL 233 +AI K ++ G+ E A ++A +GF A + ++KLY +F + DAT IEINP+ Sbjct: 123 EAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPM 182 Query: 234 SEVLDQDKKVMCMDAKFGFDDNASFRQKDVYSWRDLTQEDPDEVTAKKSDLNFVKLKGNI 293 E D D V+CMDAK FD N+++RQK ++ +D TQED + A K++LN++ L GNI Sbjct: 183 VE--DSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNI 240 Query: 294 GCLVNGAGLAMATMDVIKLYGGDPANFLDCGGGATPETIETAFKLILSNDNVDAIFVNIF 353 GCLVNGAGLAMATMD+IKL+GG PANFLD GGGAT + AFKLI S+ V AI VNIF Sbjct: 241 GCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIF 300 Query: 354 GGIVRCDFVAQGLVAATKNLSVKVPIVARLQGTNLEQGRRIIAESGLKIYSFDELDPAAE 413 GGI+RCD +AQG+V A K+L +K+P+V RLQGT ++ + +IA+SGLKI + D+LD AA Sbjct: 301 GGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAR 360 Query: 414 KVVELT 419 VV+L+ Sbjct: 361 MVVKLS 366 >7295455 [C] KOG1447 GTP-specific succinyl-CoA synthetase beta subunit Length = 416 Score = 341 bits (874), Expect = 1e-93 Identities = 184/401 (45%), Positives = 255/401 (62%), Gaps = 7/401 (1%) Query: 23 VRNLSIHEYRSAELLRQYGVGTPKGAAAHTVDEATKIAKELGGKNLVVKAQALTGGRGKG 82 VRNL++ E++S +LL++YGV + + ++ K VVKAQ L GGRGKG Sbjct: 20 VRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVKAQILAGGRGKG 79 Query: 83 HFDNGMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIVERVNAKHEAYL 142 FDNG + G+H+ + + ++ +M+G LITKQ+ G LV+ V + +N E YL Sbjct: 80 TFDNGFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYL 139 Query: 143 SILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAEIAASLGFS 202 IL+DR+ P++I S GGM+IE VA+ P+ IK ++ + T E+A L F Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFK 199 Query: 203 KEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDK-KVMCMDAKFGFDDNASFRQK 261 ++ + + KLY +FK DA QIEINPL+E DK +V+ +DAK FDDNA FRQK Sbjct: 200 GDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAET---DKGEVISVDAKLNFDDNAQFRQK 256 Query: 262 DVYSWRDLTQE--DPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIKLYGGDPAN 319 D++S D+T+E DP EV A K +LN+V + GNIGCLVNGAGLAMATMD+IKL GG+PAN Sbjct: 257 DIFSM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPAN 315 Query: 320 FLDCGGGATPETIETAFKLILSNDNVDAIFVNIFGGIVRCDFVAQGLVAATKNLSVKVPI 379 FLD GGG + + AF+++ ++ V I VN+FGGIV C +A G+VAA+K L + VP+ Sbjct: 316 FLDVGGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPL 375 Query: 380 VARLQGTNLEQGRRIIAESGLKIYSFDELDPAAEKVVELTN 420 V RL+GTN+ Q R I+ SGL I + +LD AA K V N Sbjct: 376 VVRLEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAALN 416 >Hs22041509 [C] KOG1447 GTP-specific succinyl-CoA synthetase beta subunit Length = 432 Score = 339 bits (869), Expect = 5e-93 Identities = 175/402 (43%), Positives = 258/402 (63%), Gaps = 2/402 (0%) Query: 15 SSSVVRQQVRNLSIHEYRSAELLRQYGVGTPKGAAAHTVDEATKIAKELGGKNLVVKAQA 74 S +V R L++ EY+S +L+ GV + A T +EA + AK L K +V+KAQ Sbjct: 27 SQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQI 86 Query: 75 LTGGRGKGHFDNGMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIVERV 134 L GGRGKG F++G++ G+H+ +++ +M+GY+L TKQ+ +G V+ V + E + Sbjct: 87 LAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEAL 146 Query: 135 NAKHEAYLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAE 194 + E YL+ILMDR P+++ S +GG++IE+VA +NP+ I K ++ G+ A Sbjct: 147 DISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQR 206 Query: 195 IAASLGFSKEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDKKVMCMDAKFGFDD 254 +A +LGF ++ A D + KLY +F + DATQ+E+NP E + +V+C DAK FDD Sbjct: 207 MAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGET--PEGQVVCFDAKINFDD 264 Query: 255 NASFRQKDVYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIKLYG 314 NA FRQKD+++ D ++ +P E A K DL ++ L GNI C VNGAGLAMAT D+I L G Sbjct: 265 NAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNG 324 Query: 315 GDPANFLDCGGGATPETIETAFKLILSNDNVDAIFVNIFGGIVRCDFVAQGLVAATKNLS 374 G PANFLD GGG + AFKL+ ++ V+AI VNIFGGIV C +A G+ A + L Sbjct: 325 GKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELE 384 Query: 375 VKVPIVARLQGTNLEQGRRIIAESGLKIYSFDELDPAAEKVV 416 +KVP+V RL+GTN+++ ++I+ SGL I S +L+ AA+K V Sbjct: 385 LKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLEDAAKKAV 426 >CE04242 [C] KOG1447 GTP-specific succinyl-CoA synthetase beta subunit Length = 415 Score = 328 bits (842), Expect = 7e-90 Identities = 173/411 (42%), Positives = 258/411 (62%), Gaps = 4/411 (0%) Query: 8 LRSCLHKSSSVVRQQVRNLSIHEYRSAELLRQYGVGTPKGAAAHTVDEATKIAKELGGKN 67 LR+ + S S+++ Q R L++ E++S E+L ++G A EA + G Sbjct: 2 LRAAGNLSKSMMKSQRRFLNLQEFQSKEILEKHGCSVQNFVVASNRKEAEEKWMSFGDHE 61 Query: 68 LVVKAQALTGGRGKGHFDNGMQS--GIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLV 125 VVKAQ L GGRGKG F NG + G+ + A E +M+G L+TKQ+ +G V Sbjct: 62 YVVKAQILAGGRGKGKFINGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRV 121 Query: 126 SGVYIVERVNAKHEAYLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSV 185 V I E V+ K E YL++LMDR++ P+++ S +GGM+IE VA+ P+ I K ++ + Sbjct: 122 DKVMIAEGVDIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQM 181 Query: 186 GLTPETAAEIAASLGFSKEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDKKVMC 245 G+T + +IA L F + A + +LY +F DATQ+EINPL E D +V C Sbjct: 182 GMTEGQSLKIAKDLQFEGKLIGVAAQEIKRLYDLFIAVDATQVEINPLVETADG--RVFC 239 Query: 246 MDAKFGFDDNASFRQKDVYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMA 305 +DAK FDD+A++RQK+++++ + DP EV A + +LN++ + GNI CLVNGAGLAMA Sbjct: 240 VDAKMNFDDSAAYRQKEIFAYETFEEHDPREVDAHQFNLNYIGMDGNIACLVNGAGLAMA 299 Query: 306 TMDVIKLYGGDPANFLDCGGGATPETIETAFKLILSNDNVDAIFVNIFGGIVRCDFVAQG 365 TMD+IKL+GG+PANFLD GG T + + A ++I S+ V + +NIFGGIV C +A G Sbjct: 300 TMDLIKLHGGEPANFLDVGGAVTEDAVFNAVRIITSDPRVKCVLINIFGGIVNCATIANG 359 Query: 366 LVAATKNLSVKVPIVARLQGTNLEQGRRIIAESGLKIYSFDELDPAAEKVV 416 +V+A + + VP+V RL+GTN++ ++I+ +SGLKI + + LD AA K V Sbjct: 360 VVSAVNKIGLNVPMVVRLEGTNVDAAKQIMKKSGLKILTANNLDEAAAKAV 410 >Hs22055770 [C] KOG1447 GTP-specific succinyl-CoA synthetase beta subunit Length = 383 Score = 300 bits (767), Expect = 4e-81 Identities = 157/367 (42%), Positives = 234/367 (62%), Gaps = 3/367 (0%) Query: 50 AHTVDEATKIAKELGGKNLVVKAQALTGGRGKGHFDNGMQSGIHMIDSVQDATEVSGKML 109 A T +EA + AK L K +V+KAQ L GGRGKG F++G++ G+H+ +++ +M+ Sbjct: 14 ADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMI 73 Query: 110 GYHLITKQSGIKGKLVSGVYIVERVNAKHEAYLSILMDRKTKKPLIICSSEGGMNIEDVA 169 GY+L TKQ+ +G V+ V + E ++ E YL+ILMD+ P+++ S + G++IE+VA Sbjct: 74 GYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEVA 133 Query: 170 KTNPDAIKKFYVEDSVGLTPETAAEIAASLGFSKEAEADAKDAVLKLYKIFKEKDATQIE 229 +NP+ I K ++ G+ A +A +LGF ++ A D + KLY +F + DATQ+E Sbjct: 134 ASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVE 193 Query: 230 INPLSEVLDQDKKVMCMDAKFGFDDNASFRQKDVYSWRDLTQEDPDEVTAKKSDLNFVKL 289 +NP E + +V+C DAK FDDNA F+QKD+++ D ++ +P E A K DL ++ L Sbjct: 194 VNPFGET--PEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGL 251 Query: 290 KGNIGCLVNGAGLAMATMDVIKLYGGDPANFLDCGGGATPETIETAFKLILSNDNVDAIF 349 GNI C VNGAGLAMAT D+I L G PA+FLD GGG + AF L ++ V+AI Sbjct: 252 DGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAIL 311 Query: 350 VNIFGGIVRCDFVAQGLVAATKNLSVKVPIVARLQGTNLEQGRRIIAESGLKIYSFDELD 409 VNIFGGIV C +A G+ A + L +KVP+V L+GTN+++ + I+ S L I S +L+ Sbjct: 312 VNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQEAQEIL-NSRLPITSAVDLE 370 Query: 410 PAAEKVV 416 AA+K V Sbjct: 371 DAAKKAV 377 >Hs22056553 [C] KOG2799 Succinyl-CoA synthetase beta subunit Length = 229 Score = 211 bits (536), Expect = 2e-54 Identities = 111/221 (50%), Positives = 150/221 (67%), Gaps = 3/221 (1%) Query: 199 LGFSKEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDKKVMCMDAKFGFDDNASF 258 +GF A A + ++KLY +F + DAT IEIN + E D D +C DAK FD N+++ Sbjct: 1 MGFPSNIVASAAENMIKLYSLFLKYDATMIEINSMVE--DSDGAALCKDAKINFDSNSAY 58 Query: 259 RQKDVYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIKLYGGDPA 318 RQK ++ +D TQED A K+DLN+ L G+IGCLVNGAGLAMATMD+IKL+G PA Sbjct: 59 RQKKMFDLQDWTQEDERNKDAAKADLNYTGLDGSIGCLVNGAGLAMATMDIIKLHGETPA 118 Query: 319 NFLDCGGGATPETIETAFKLILSNDNVDAIFVNIFGGIVRCDFVAQGLVAATKNLSVKVP 378 NFL GGGAT + AFK I S+ V AI VNI GGI+ CD A+G+V A K+L +K+P Sbjct: 119 NFL-VGGGATVHQVTEAFKPITSDKKVLAILVNICGGIMHCDITAKGIVMAVKSLEIKIP 177 Query: 379 IVARLQGTNLEQGRRIIAESGLKIYSFDELDPAAEKVVELT 419 +V +LQGT ++ + + A+SGLKI + D+L AA +V+L+ Sbjct: 178 VVVQLQGTQVDDVKALKADSGLKILACDDLVEAARVLVKLS 218 >At1g10670 [C] KOG1254 ATP-citrate lyase Length = 423 Score = 75.9 bits (185), Expect = 1e-13 Identities = 105/403 (26%), Positives = 174/403 (43%), Gaps = 63/403 (15%) Query: 28 IHEYRSAELLRQY-----GVGTPKGAAA--HTVDEATKIAKE--LGGKNLVVKAQALTGG 78 I EY S L++++ G P + T D + KE L + LVVK L G Sbjct: 6 IREYDSKRLVKEHFKRLSGKELPIRSVQINETTDLNELVEKEPWLSSEKLVVKPDMLFGK 65 Query: 79 RGKGHFDNGMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIVER-VNAK 137 RGK +G+ + +D AT V + LG + + SG KG + + +IVE V Sbjct: 66 RGK----SGLVA--LKLDFADVATFVK-ERLGKEV--EMSGCKGPITT--FIVEPFVPHN 114 Query: 138 HEAYLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAEIAA 197 E YL+++ DR I S GG+ IE+ N D +K ++ LTPE A + A Sbjct: 115 EEYYLNVVSDRLGCS--ISFSECGGIEIEE----NWDKVKTIFLPTGASLTPEICAPLVA 168 Query: 198 SLGFSKEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDKKVMCMDAKFGFDDNAS 257 +L E +A+ ++ + ++ +F++ D T +E+NP + V D +D + DD A+ Sbjct: 169 TLPL--EIKAEIEEFIKVIFTLFQDLDFTFLEMNPFTLV---DGSPYPLDMRGELDDTAA 223 Query: 258 FRQKDVYSWRDLTQEDP---------------DEVTAKKSDLNFVKLKGNIGCLVNGAGL 302 F K+ W D+ P DE T+ + KG I +V G G Sbjct: 224 F--KNFKKWGDIEFPLPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGA 281 Query: 303 AMATMDVI--KLYGGDPANFLDCGGGATPETIETAFKLIL----SNDNVDAIFVNIFGGI 356 ++ D + Y + N+ + G + + ++++ +N + + + I GGI Sbjct: 282 SVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGI 341 Query: 357 VRCDFVA---QGLVAATKNLSVKVP-----IVARLQGTNLEQG 391 VA G++ A K K+ I R G N ++G Sbjct: 342 ANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKG 384 >At1g60810 [C] KOG1254 ATP-citrate lyase Length = 423 Score = 72.4 bits (176), Expect = 1e-12 Identities = 92/359 (25%), Positives = 150/359 (41%), Gaps = 54/359 (15%) Query: 63 LGGKNLVVKAQALTGGRGKGHFDNGMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKG 122 L + LVVK L G RGK + + D E GK + + SG KG Sbjct: 50 LSSEKLVVKPDMLFGKRGKSGL---VALNLDFADVATFVKERLGKEV------EMSGCKG 100 Query: 123 KLVSGVYIVER-VNAKHEAYLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYV 181 + + +IVE V E YL+I+ DR I S GG++IE+ N D +K + Sbjct: 101 PITT--FIVEPFVPHNEEFYLNIVSDRLGCS--ISFSECGGIDIEE----NWDKVKTITI 152 Query: 182 EDSVGLTPETAAEIAASLGFSKEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDK 241 LT E A + A+L E + + +D + ++ +F++ D T +E+NP + V D Sbjct: 153 PTGASLTFEICAPLVATLPL--EIKGELEDFIQVIFTLFEDLDFTFLEMNPFTLV---DG 207 Query: 242 KVMCMDAKFGFDDNASFRQKDVYSWRDLTQEDP---------------DEVTAKKSDLNF 286 K +D + DD A+F K+ W D+ P DE T+ Sbjct: 208 KPYPLDMRGELDDTAAF--KNFKKWGDIEFPMPFGRVMSSTESFIHGLDEKTSASLKFTV 265 Query: 287 VKLKGNIGCLVNGAGLAMATMDVI--KLYGGDPANFLDCGGGATPETIETAFKLIL---- 340 + KG I +V G G ++ D + Y + N+ + G + + ++++ Sbjct: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCAT 325 Query: 341 SNDNVDAIFVNIFGGIVRCDFVA---QGLVAATKNLSVKVP-----IVARLQGTNLEQG 391 +N + + + I GGI VA G++ A K K+ I R G N ++G Sbjct: 326 ANPDGKSRALVIGGGIANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKG 384 >At1g09430 [C] KOG1254 ATP-citrate lyase Length = 424 Score = 60.5 bits (145), Expect = 5e-09 Identities = 96/406 (23%), Positives = 162/406 (39%), Gaps = 69/406 (16%) Query: 28 IHEYRSAELLRQY---------GVGTPKGAAAHTVDEATKIAKELGGKNLVVKAQALTGG 78 I EY S LL+++ + + + + E T L LVVK L G Sbjct: 6 IREYDSKRLLKEHLKRLANIDLQIRSAQVTESTDFTELTNQESWLSSTKLVVKPDMLFGK 65 Query: 79 RGKGHFDNGMQSGIHMID-SVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIVER-VNA 136 RGK SG+ + + + + LG + + G K + + +IVE V Sbjct: 66 RGK--------SGLVALKLDLAEVADFVKARLGTEV--EMEGCKAPITT--FIVEPFVPH 113 Query: 137 KHEAYLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAEIA 196 E YLSI+ DR I S GG+ IE+ N D +K ++ +T E A + Sbjct: 114 DQEYYLSIVSDR--LGCTISFSECGGIEIEE----NWDKVKTIFLPAEKSMTLEVCAPLI 167 Query: 197 ASLGFSKEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDKKVMCMDAKFGFDDNA 256 A+L E A + ++ + +F++ D + +E+NP + V D + +D + DD A Sbjct: 168 ATLPL--EVRAKIGNFIMGAFAVFQDLDFSFMEMNPFTLV---DGEPFPLDMRGELDDTA 222 Query: 257 SFRQKDVYSWRDLTQEDP---------------DEVTAKKSDLNFVKLKGNIGCLVNGAG 301 +F K+ W D+ P DE T+ + KG I +V G G Sbjct: 223 AF--KNFNKWGDIEFPLPFGRVLSSTENFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGG 280 Query: 302 LAMATMDVI--KLYGGDPANFLDCGGGATPETIETAFKLILSNDNVD------AIFVNIF 353 ++ D + Y + N+ + G E + ++++ D A+ + Sbjct: 281 ASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATTDPDGRKRALLIG-- 338 Query: 354 GGIVRCDFVA---QGLVAA-----TKNLSVKVPIVARLQGTNLEQG 391 GGI VA G++ A T+ + ++ I R G N + G Sbjct: 339 GGIANFTDVAATFNGIIRALREKETRLKASRMHIYVRRGGPNYQTG 384 >Hs20533572 [C] KOG2799 Succinyl-CoA synthetase beta subunit Length = 501 Score = 58.9 bits (141), Expect = 1e-08 Identities = 35/85 (41%), Positives = 46/85 (53%), Gaps = 1/85 (1%) Query: 258 FRQKDVYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIKLYGGDP 317 +RQK ++ +D TQED K LN L G IGCLVNGAGLA+ T+ + KL+ P Sbjct: 160 YRQK-IFDLQDWTQEDERNKDEAKPHLNNTGLSGKIGCLVNGAGLAITTIGIRKLHKETP 218 Query: 318 ANFLDCGGGATPETIETAFKLILSN 342 FL AT + + LI S+ Sbjct: 219 NRFLVAHVSATVHQVTESLMLITSD 243 >CE06997 [C] KOG1254 ATP-citrate lyase Length = 1106 Score = 57.0 bits (136), Expect = 5e-08 Identities = 76/304 (25%), Positives = 127/304 (41%), Gaps = 46/304 (15%) Query: 137 KHEAYLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAEIA 196 K E Y++I +R + +I+ +GG++I DV + + ++ +TP E+ Sbjct: 115 KDEMYIAIYSERF--RDVIMFYEQGGVDIGDVEEKARTVSVPVQLNENA-MTPSDE-ELT 170 Query: 197 ASLGFSKEAEADAKDAVLKLYKIFKEKDATQIEINP------------LSEVLDQDKKVM 244 LG K+++ + V++LYK +K+ T +EINP L+ LD+ + Sbjct: 171 TLLGPLKDSDI-VRRFVVELYKAYKDLHFTYLEINPFVLLNNQIHVLDLAARLDETANFL 229 Query: 245 CMD------AKFGFDDNASFRQKDVYSWRDLTQEDP-----DEVTAKKSDLNFVKLKGNI 293 C D +G ++ F RDLT E+ D T L + KG + Sbjct: 230 CADKWKSRLTPYGGPNHVEF---PAPFGRDLTSEEQYISEMDAKTGASLKLTILNRKGRV 286 Query: 294 GCLVNGAGLAMATMDVIKLYGG--DPANFLDCGGGATPETIETAFKLILS-----NDNVD 346 +V G G ++ D + GG + AN+ + G + K +LS D Sbjct: 287 WTMVAGGGASVVFTDTVCDLGGASELANYGEYSGDPSESQTYEYAKTLLSVMTEGTPRPD 346 Query: 347 AIFVNIFGGIVRCDFVAQ---GLVAA-----TKNLSVKVPIVARLQGTNLEQGRRIIAES 398 + I G I VA+ G+V A +K KV I R G N ++G R I ++ Sbjct: 347 GKVLIIGGSIANFTNVAKTFGGIVRAFETFVSKLKEHKVTIFVRRGGPNYQEGLRRIKDA 406 Query: 399 GLKI 402 K+ Sbjct: 407 ATKL 410 >CE07719 [C] KOG1254 ATP-citrate lyase Length = 1099 Score = 56.6 bits (135), Expect = 7e-08 Identities = 105/425 (24%), Positives = 165/425 (38%), Gaps = 68/425 (16%) Query: 27 SIHEYRSAELLRQYGVGTPKGAAAHTV---------DEATKIAKELGGKNLVVKAQALTG 77 ++ E E+L +Y T +A H D A K V+K L Sbjct: 5 AVSELSGKEVLYKYFESTGIVSAPHAFHVKAGDKFSDVAAKYEWLAQDNKGVIKPDQLIK 64 Query: 78 GRGKGHFDNGMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIVERVNA- 136 RGK G+ I S ++ GK ++ Q+ +G+L + +IVE A Sbjct: 65 RRGK--------LGLVKIGSPKELEAWFGKTANSYVKVGQT--EGRLHT--FIVEPFCAH 112 Query: 137 --KHEAYLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAE 194 E Y++I +R + +I+ +GG++I DV + ++D+ E E Sbjct: 113 TENEEMYIAIYSERC--RDVIMFYEQGGVDIGDVEEKARSVHVPVQLDDNAMSISER--E 168 Query: 195 IAASLGFSKEAEADAKDAVLKLYKIFKEKDATQIEINP------------LSEVLDQDKK 242 + LG + + D + V LY+ +K T +EINP L+ LD+ Sbjct: 169 LGVLLGPCSDKD-DIRKFVRSLYEAYKALHFTYLEINPFVLTNGKIHILDLAAKLDETAS 227 Query: 243 VMCMDAKFGFDDNASFRQKDVYSW-----RDLTQE-----DPDEVTAKKSDLNFVKLKGN 292 +C D G NAS R + RDLT E D D T L + KG Sbjct: 228 FLCSDKWSG--RNASARIAPTLEFPAPFGRDLTSEEQYISDMDAKTGASLKLTILNRKGR 285 Query: 293 IGCLVNGAGLAMATMDVIKLYGG--DPANFLDCGGGATPETIETAFKLILS-----NDNV 345 + +V G G ++ D + GG + AN+ + G + K ILS Sbjct: 286 VWTMVAGGGASVVFTDTVCDLGGSSELANYGEYSGDPSEAQTYEYAKTILSVMTEGAPRP 345 Query: 346 DAIFVNIFGGIVRCDFVAQ---GLVAATKNLSVK-----VPIVARLQGTNLEQGRRIIAE 397 D + I G I VA+ G+V A + K V I R G N ++G R + + Sbjct: 346 DGKVLIIGGSIANFTNVAKTFGGIVRAFETFIDKLKEHNVSIYVRRGGPNYQEGLRRVKD 405 Query: 398 SGLKI 402 + K+ Sbjct: 406 AATKL 410 Database: KOG eukaryal database 04/03 Posted date: Apr 14, 2003 1:07 PM Number of letters in database: 30,389,216 Number of sequences in database: 60,738 Lambda K H 0.316 0.134 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,128,584 Number of Sequences: 60738 Number of extensions: 1038304 Number of successful extensions: 2782 Number of sequences better than 1.0e-05: 17 Number of HSP's better than 0.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 2746 Number of HSP's gapped (non-prelim): 18 length of query: 422 length of database: 30,389,216 effective HSP length: 109 effective length of query: 313 effective length of database: 23,768,774 effective search space: 7439626262 effective search space used: 7439626262 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)