ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI1584 good U KOG1652 Intracellular trafficking, secretion, and vesicular transport Mitochondrial import inner membrane translocase, subunit TIM17
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI1584 544439 543978 -154
(154 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJL143w [U] KOG1652 Mitochondrial import inner membrane transloc... 302 1e-82
SPAC3A12.16c [U] KOG1652 Mitochondrial import inner membrane tra... 235 2e-62
Hs5032181 [U] KOG1652 Mitochondrial import inner membrane transl... 154 6e-38
7298231 [U] KOG1652 Mitochondrial import inner membrane transloc... 150 6e-37
7296768 [U] KOG1652 Mitochondrial import inner membrane transloc... 148 2e-36
Hs5454120 [U] KOG1652 Mitochondrial import inner membrane transl... 145 3e-35
At2g37410 [U] KOG1652 Mitochondrial import inner membrane transl... 142 2e-34
At1g20350 [U] KOG1652 Mitochondrial import inner membrane transl... 142 2e-34
CE16966 [U] KOG1652 Mitochondrial import inner membrane transloc... 129 1e-30
7296773 [U] KOG1652 Mitochondrial import inner membrane transloc... 125 2e-29
7299598 [U] KOG1652 Mitochondrial import inner membrane transloc... 125 2e-29
7295533 [U] KOG1652 Mitochondrial import inner membrane transloc... 119 2e-27
At5g11690 [U] KOG1652 Mitochondrial import inner membrane transl... 107 8e-24
CE04299 [U] KOG1652 Mitochondrial import inner membrane transloc... 56 2e-08
SPBC25H2.04c [U] KOG3225 Mitochondrial import inner membrane tra... 53 1e-07
>YJL143w [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 158
Score = 302 bits (774), Expect = 1e-82
Identities = 142/158 (89%), Positives = 150/158 (94%), Gaps = 4/158 (2%)
Query: 1 MSADHSRDPCPIVILNDFGGAFAMGVIGGCVWHGIKGFRNSPLGERRAGAVSAIKARAPV 60
MSADHSRDPCPIVILNDFGGAFAMG IGG VWHGIKGFRNSPLGER +GA+SAIKARAPV
Sbjct: 1 MSADHSRDPCPIVILNDFGGAFAMGAIGGVVWHGIKGFRNSPLGERGSGAMSAIKARAPV 60
Query: 61 VGGNFGVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCAC 120
+GGNFGVWGGLFSTFDC VKAVRKREDPWNAIIAGFFTGGALA+RGGW+HTRNS+ITCAC
Sbjct: 61 LGGNFGVWGGLFSTFDCAVKAVRKREDPWNAIIAGFFTGGALAVRGGWRHTRNSSITCAC 120
Query: 121 LLGVIEGVGLMFQRYAAWQAKPMAPPLPD----QPMQA 154
LLGVIEGVGLMFQRYAAWQAKPMAPPLP+ QP+QA
Sbjct: 121 LLGVIEGVGLMFQRYAAWQAKPMAPPLPEAPSSQPLQA 158
>SPAC3A12.16c [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 164
Score = 235 bits (600), Expect = 2e-62
Identities = 105/150 (70%), Positives = 123/150 (82%)
Query: 2 SADHSRDPCPIVILNDFGGAFAMGVIGGCVWHGIKGFRNSPLGERRAGAVSAIKARAPVV 61
SADH+RDPCP VILNDFG AF+MG IGG +WH IKG+RNSP GE+R A++A K RAPV+
Sbjct: 3 SADHTRDPCPYVILNDFGAAFSMGTIGGAIWHSIKGWRNSPPGEKRISAIAAAKTRAPVL 62
Query: 62 GGNFGVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCACL 121
GGNFGVWGGLFSTFDC VK VR++EDPWNAIIAGFFTGGALA+RGGW+ TRN AI CAC+
Sbjct: 63 GGNFGVWGGLFSTFDCAVKGVRRKEDPWNAIIAGFFTGGALAVRGGWRATRNGAIGCACI 122
Query: 122 LGVIEGVGLMFQRYAAWQAKPMAPPLPDQP 151
L V EG+G+ R A +P+AP +PD P
Sbjct: 123 LAVFEGLGIALGRMNAEYNRPVAPVIPDAP 152
>Hs5032181 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 172
Score = 154 bits (388), Expect = 6e-38
Identities = 77/152 (50%), Positives = 103/152 (67%), Gaps = 3/152 (1%)
Query: 4 DHSRDPCPIVILNDFGGAFAMGVIGGCVWHGIKGFRNSPLG--ERRAGAVSAIKARAPVV 61
+++R+PCP I++D GGAF MGVIGG V+ IKGFRN+P+G R G+ +A++ RAP +
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQI 62
Query: 62 GGNFGVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCACL 121
GG+F VWGGLFST DCG+ +R +EDPWN+I +G TG LA R G SA+ L
Sbjct: 63 GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGIL 122
Query: 122 LGVIEGVGLMFQRYAAWQAKPMAPPLPDQPMQ 153
L +IEGVG++ RY A Q + APP + P Q
Sbjct: 123 LALIEGVGILLTRYTAQQFR-NAPPFLEDPSQ 153
>7298231 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 413
Score = 150 bits (379), Expect = 6e-37
Identities = 74/149 (49%), Positives = 103/149 (68%), Gaps = 3/149 (2%)
Query: 4 DHSRDPCPIVILNDFGGAFAMGVIGGCVWHGIKGFRNSP--LGERRAGAVSAIKARAPVV 61
++SR+PCP I++D GGAF MG +GG ++ G+KGFRN+P LG R AG+V+AIK ++PV+
Sbjct: 3 EYSREPCPHRIVDDCGGAFIMGCVGGGLFQGLKGFRNAPQGLGRRVAGSVAAIKTKSPVI 62
Query: 62 GGNFGVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCACL 121
GG+F WG +FS DC + R++EDPWN+I++G TGG LA R G SAI L
Sbjct: 63 GGSFAAWGAVFSIVDCSLVHFRQKEDPWNSIVSGAVTGGILASRNGAAAMAGSAIIGGVL 122
Query: 122 LGVIEGVGLMFQRYAAWQAKPMAPP-LPD 149
L +IEG+G+ F R+AA Q + P +PD
Sbjct: 123 LSMIEGLGIFFTRFAAEQFRNREPHIMPD 151
>7296768 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 205
Score = 148 bits (374), Expect = 2e-36
Identities = 72/145 (49%), Positives = 98/145 (66%), Gaps = 2/145 (1%)
Query: 3 ADHSRDPCPIVILNDFGGAFAMGVIGGCVWHGIKGFRNSP--LGERRAGAVSAIKARAPV 60
A++ R+PCP I+ D GGAFAMG +GG + IKGFRN+P LG R +G ++A++AR+ +
Sbjct: 2 AEYGREPCPFRIVEDCGGAFAMGALGGGAFQAIKGFRNAPSGLGYRLSGGLAAVRARSGL 61
Query: 61 VGGNFGVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCAC 120
VGGNF VWG FS DC + RK+EDPWNAII+G TGG LA R G +SA+
Sbjct: 62 VGGNFAVWGATFSAIDCSLVYFRKKEDPWNAIISGATTGGILAARTGLTSMLSSALVGGA 121
Query: 121 LLGVIEGVGLMFQRYAAWQAKPMAP 145
LL +IEGVG++ Y+A + ++P
Sbjct: 122 LLALIEGVGIVVSHYSADSYRQVSP 146
>Hs5454120 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 171
Score = 145 bits (365), Expect = 3e-35
Identities = 74/152 (48%), Positives = 98/152 (63%), Gaps = 3/152 (1%)
Query: 4 DHSRDPCPIVILNDFGGAFAMGVIGGCVWHGIKGFRNSPLG--ERRAGAVSAIKARAPVV 61
+++R+PCP I++D GGAF MG IGG ++ IKGFRNSP+G R G+++AIK RAP +
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQL 62
Query: 62 GGNFGVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCACL 121
GG+F VWGGLFS DC + VR +EDPWN+I +G TG LA R G SA L
Sbjct: 63 GGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGIL 122
Query: 122 LGVIEGVGLMFQRYAAWQAKPMAPPLPDQPMQ 153
L +IEG G++ R+A+ Q P P + P Q
Sbjct: 123 LALIEGAGILLTRFASAQF-PNGPQFAEDPSQ 153
>At2g37410 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 243
Score = 142 bits (358), Expect = 2e-34
Identities = 73/148 (49%), Positives = 92/148 (61%), Gaps = 3/148 (2%)
Query: 6 SRDPCPIVILNDFGGAFAMGVIGGCVWHGIKGFRNSPLGERRAGAVSAIKARAPVVGGNF 65
SR+PCP IL+D GGAF MG +GG +H IKG NSP G R G ++ AP GG+F
Sbjct: 7 SREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAPRTGGSF 66
Query: 66 GVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCACLLGVI 125
VWGGLFSTFDC + +R++EDPWN+IIAG TGG L++R G SAI LL +I
Sbjct: 67 AVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGGVLLALI 126
Query: 126 EGVGLMFQRYAAWQAKPMAPPLPDQPMQ 153
EG G+M + A+P + D MQ
Sbjct: 127 EGAGIMLNKVL---AQPQNMMMEDPGMQ 151
>At1g20350 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 218
Score = 142 bits (357), Expect = 2e-34
Identities = 66/131 (50%), Positives = 90/131 (68%)
Query: 4 DHSRDPCPIVILNDFGGAFAMGVIGGCVWHGIKGFRNSPLGERRAGAVSAIKARAPVVGG 63
+ SR+PCP IL+D GGAFAMG +GG +H I+G NSP G R +G V A++ P GG
Sbjct: 5 ESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGPRSGG 64
Query: 64 NFGVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCACLLG 123
+F VWGGL+STFDC + R++EDPWN+I++G TGG L++R G + SA+ LL
Sbjct: 65 SFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGGVLLA 124
Query: 124 VIEGVGLMFQR 134
+IEGVG+M +
Sbjct: 125 MIEGVGIMLNK 135
>CE16966 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 181
Score = 129 bits (325), Expect = 1e-30
Identities = 60/143 (41%), Positives = 91/143 (62%)
Query: 4 DHSRDPCPIVILNDFGGAFAMGVIGGCVWHGIKGFRNSPLGERRAGAVSAIKARAPVVGG 63
+++R+PCP I +D G AFAMG++GG ++ G++N+ G++ G + ++ R+ + G
Sbjct: 3 EYTREPCPYRIGDDIGSAFAMGLVGGSIFQAFGGYKNAAKGKKLVGMMREVRMRSTLTGV 62
Query: 64 NFGVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCACLLG 123
F WGG+FST DC + A+RK+EDP N+I++G TG LAIR G K SAI + +L
Sbjct: 63 QFAAWGGMFSTIDCCLVAIRKKEDPINSIVSGGLTGALLAIRSGPKVMAGSAILGSVILA 122
Query: 124 VIEGVGLMFQRYAAWQAKPMAPP 146
+IEGVGL+ R+ P PP
Sbjct: 123 MIEGVGLVTTRWMGAMMDPTQPP 145
>7296773 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 224
Score = 125 bits (315), Expect = 2e-29
Identities = 58/128 (45%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Query: 4 DHSRDPCPIVILNDFGGAFAMGVIGGCVWHGIKGFRNSPLGERRA--GAVSAIKARAPVV 61
+++R PCPI I+ D G AF MG +GG ++ +KGFRN+P G RR G + +++ R P +
Sbjct: 2 EYNRQPCPIRIVEDCGCAFMMGTMGGSLFQYLKGFRNAPSGLRRGLHGGIESVRLRTPAI 61
Query: 62 GGNFGVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCACL 121
G+F +WG FST DC + + R+RED WNAI++G TGG LA R G + NSA +
Sbjct: 62 AGSFAIWGATFSTVDCVMVSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGCLV 121
Query: 122 LGVIEGVG 129
L ++EG G
Sbjct: 122 LAMLEGAG 129
>7299598 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 222
Score = 125 bits (314), Expect = 2e-29
Identities = 60/128 (46%), Positives = 82/128 (63%), Gaps = 2/128 (1%)
Query: 4 DHSRDPCPIVILNDFGGAFAMGVIGGCVWHGIKGFRNSPLGERRA--GAVSAIKARAPVV 61
+++R PCPI I+ D G AF MG IGG ++ +KGFRN+P G +R G + +K R P +
Sbjct: 2 EYNRQPCPIRIVEDCGCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSI 61
Query: 62 GGNFGVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCACL 121
G+F VWG FST DC + R+RED WN+I++G TGG LA R G + NSA+ +
Sbjct: 62 AGSFAVWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVGCLV 121
Query: 122 LGVIEGVG 129
L +IEG G
Sbjct: 122 LAMIEGAG 129
>7295533 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 163
Score = 119 bits (297), Expect = 2e-27
Identities = 58/124 (46%), Positives = 82/124 (65%), Gaps = 2/124 (1%)
Query: 24 MGVIGGCVWHGIKGFRNSPLGERR--AGAVSAIKARAPVVGGNFGVWGGLFSTFDCGVKA 81
MG GG ++ G+KGFRN+P G +R AG ++A+K+R+P +GGNF WG +FS DC +
Sbjct: 1 MGCFGGGLFQGLKGFRNAPQGLKRRFAGGLAAVKSRSPTIGGNFAAWGCVFSIVDCSLVH 60
Query: 82 VRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCACLLGVIEGVGLMFQRYAAWQAK 141
+RK+EDPWN+I++G GG L+ R G SAI LL +IEGVG++F R +A Q +
Sbjct: 61 LRKKEDPWNSIMSGAIAGGILSSRNGVAAMFGSAIIGGVLLSMIEGVGILFTRISAEQFR 120
Query: 142 PMAP 145
P
Sbjct: 121 NSDP 124
>At5g11690 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 133
Score = 107 bits (266), Expect = 8e-24
Identities = 52/112 (46%), Positives = 68/112 (60%)
Query: 14 ILNDFGGAFAMGVIGGCVWHGIKGFRNSPLGERRAGAVSAIKARAPVVGGNFGVWGGLFS 73
I+N G AF G +GG V+H ++G NSP+G R G A AP +GG F V+GGL S
Sbjct: 15 IVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAPRLGGTFAVFGGLLS 74
Query: 74 TFDCGVKAVRKREDPWNAIIAGFFTGGALAIRGGWKHTRNSAITCACLLGVI 125
TFD + +RK+EDPWN+I+AG TGG L+IR G SA+ L V+
Sbjct: 75 TFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFGFFLAVL 126
>CE04299 [U] KOG1652 Mitochondrial import inner membrane translocase subunit
TIM17
Length = 158
Score = 55.8 bits (133), Expect = 2e-08
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 57 RAPVVGGNFGVWGGLFSTFDCGVKAVRKREDPWNAIIAGFFTGGALAIR 105
R+ + G F WGGLFST DC + A RK+ED N+I++G TG LAIR
Sbjct: 2 RSTLAGVQFAAWGGLFSTIDCCLVANRKKEDSINSIVSGGLTGALLAIR 50
>SPBC25H2.04c [U] KOG3225 Mitochondrial import inner membrane translocase subunit
TIM22
Length = 175
Score = 53.1 bits (126), Expect = 1e-07
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 19 GGAFAMGVIGGCVWHGIKGFRNSPLGERRAGAVSAIKARAPVVGGNFGVWGGLFSTFDCG 78
GG F M + + H P E+ + +R+ NFG+ G ++S +C
Sbjct: 61 GGIFGMFISSLDLQHIDPKIYEKPFREQIRIQARDMGSRSFSTAKNFGLLGLIYSGSECC 120
Query: 79 VKAVRKREDPWNAIIAGFFTGGALAIRGGWK 109
++A R + D +NAI AG FTGGALA+R G K
Sbjct: 121 IEAFRAKTDIYNAIAAGVFTGGALAVRSGPK 151
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.325 0.142 0.479
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,095,381
Number of Sequences: 60738
Number of extensions: 408847
Number of successful extensions: 1070
Number of sequences better than 1.0e-05: 15
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1048
Number of HSP's gapped (non-prelim): 15
length of query: 154
length of database: 30,389,216
effective HSP length: 97
effective length of query: 57
effective length of database: 24,497,630
effective search space: 1396364910
effective search space used: 1396364910
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)