ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI1623 good R KOG2425 General function prediction only Nuclear protein involved in cell morphogenesis and cell surface growth
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI1623 556650 555283 -456
(456 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YKR063c [R] KOG2425 Nuclear protein involved in cell morphogenes... 183 4e-46
SPBC16C6.12c [R] KOG2425 Nuclear protein involved in cell morpho... 93 9e-19
Hs13654270 [R] KOG2425 Nuclear protein involved in cell morphoge... 75 2e-13
At5g12220 [R] KOG2425 Nuclear protein involved in cell morphogen... 73 1e-12
7294776 [R] KOG2425 Nuclear protein involved in cell morphogenes... 73 1e-12
>YKR063c [R] KOG2425 Nuclear protein involved in cell morphogenesis and cell
surface growth
Length = 502
Score = 183 bits (465), Expect = 4e-46
Identities = 150/510 (29%), Positives = 223/510 (43%), Gaps = 67/510 (13%)
Query: 2 RITPWRSRSELEQLKQWLFVDDTPA---SKRRAIQRIDAYLTRGP-YLPHIIEYTVRLMQ 57
RI PWR +ELE+LK W + ++RA+QR+ +Y +G YLPH+++ T ++
Sbjct: 5 RIVPWRDFAELEELKLWFYPKSKGTIEDKRQRAVQRVQSYRLKGSQYLPHVVDSTAQITC 64
Query: 58 CQLNDPGEAQDG--DDMEYLKWQYCMVLIRFVNGMLDPVQQAQFAIPLHTLAENIGLPSW 115
L D EA G D ++ Y M LIRFVNG+LDP QQ+QFAIPLHTLA IGLPSW
Sbjct: 65 AVLLDEKEACLGVHQDSIPIRLSYVMALIRFVNGLLDPTQQSQFAIPLHTLAAKIGLPSW 124
Query: 116 FVELRHLSTHERELPSLEMLRLCCKEAIQWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
FV+LRH THER+LP LEMLR EA+ W
Sbjct: 125 FVDLRHWGTHERDLPGLEMLRWAANEALSWLYDHYWNDEELEDDRDDDDDDDDTGYGYRR 184
Query: 176 XXXXXKKRKSQSSVQLKSLFTQYTGLKRLLKENEYLWKRQR---IARSTFGEQD------ 226
K +S L ++ L+ E +++W+ I S F +
Sbjct: 185 NDKLEKYMES-----LTKTLDKWKRLRNEFLEYKWVWENANDSLITSSNFSGDNLVNYDA 239
Query: 227 --------STEDEEVSDWLTVLKTAWK-QIHKSDFVEYMILHCDETLLEICFHSLDTFQV 277
S+ + + + L + WK I+ + +E + D LL++ +L+ F
Sbjct: 240 EKRKSSHASSSETMIRENLRQWQELWKLSIYHNVVLEKFFNNYDPLLLKVLMLNLNNFDW 299
Query: 278 RCIEWLIENYEKRIMNEETKITD----RFSNHKKLLK-FVNKCCSMVNGRKFLSNGL-FS 331
+ IEW+ NY R +++ IT +F+ K+L K ++ + +N + F + +
Sbjct: 300 KVIEWVARNY--RTQQDDSNITTILKRKFNAWKELQKRLLDVIINNLNNKNFKNKWQNWE 357
Query: 332 NVVDKYHNYLVLHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIEEFEAKGIRNV- 390
++D+ +YL+L+ E EAK N+
Sbjct: 358 KLIDENASYLILYFCQSMLAKLETEKITGNSWRNKKRRKQIDSTV----EIEAKLKENID 413
Query: 391 ---------ELELYNSRKRTSSEEIEPVSEDSPAL-----DILKDLNELKNQF------- 429
E++LY+ + + E SPAL DIL DL LK +
Sbjct: 414 NLSLRFNEGEIKLYDFIP-AEKDSVPLKKEVSPALKADTNDILGDLASLKQRMSSFGTVG 472
Query: 430 KKIKQSN---APISNWQEVTEWTPRPFGVL 456
KK KQ P+ NW V W P+PFGVL
Sbjct: 473 KKNKQEENRATPVKNWSRVQNWKPKPFGVL 502
>SPBC16C6.12c [R] KOG2425 Nuclear protein involved in cell morphogenesis and cell
surface growth
Length = 470
Score = 92.8 bits (229), Expect = 9e-19
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 18/151 (11%)
Query: 1 MRITPWRSRSELEQLKQWLFVDDTP-----ASKRRAIQRIDAYLTRGPYLPHIIEYTVRL 55
M++ PWR + + L + + A+ R ++ I A+ TRG +PH +E T +L
Sbjct: 3 MKVVPWRLKEDFLYLMSCFYNEGQEGIPDLAALFRGVEIIQAWSTRGR-IPHSVESTSQL 61
Query: 56 MQCQL-NDPGEAQDGDDMEYLKWQYCMVLIRFVNGMLDPVQQAQFAIPLHTLAENIGLPS 114
+ + ND + K + + RFV+G+LDP+QQ+Q+AIP+ LA++I LP+
Sbjct: 62 VSSLISNDRSQ----------KLALAVSISRFVSGLLDPIQQSQYAIPMAVLAKSIDLPT 111
Query: 115 WFVELRHLSTHERELPSLEMLRLCCKEAIQW 145
+FVELRH THE ELPSL +LR + A+ W
Sbjct: 112 YFVELRHAITHE-ELPSLPVLRQAAQRALSW 141
>Hs13654270 [R] KOG2425 Nuclear protein involved in cell morphogenesis and cell
surface growth
Length = 734
Score = 75.5 bits (184), Expect = 2e-13
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 3 ITPWRSRSELEQLKQWLFVDDTPASKRRAIQRIDAYLTR-GPYLPHIIEYTVRLMQCQLN 61
+ W SR+E +Q+ +LF DD +R A+ RI + +R G LP + T L++C+L
Sbjct: 42 VVAWLSRAEWDQVTVYLFCDDHKL-QRYALNRITVWRSRSGNELPLAVASTADLIRCKLL 100
Query: 62 DPGEAQDGDDMEYLKWQYCMVLIRFVNGMLDPVQQAQFA-IPLHTLAENIGLPSWFVELR 120
D D++ L Y M L+RFVN L ++ +FA +PL LA+ + +P W V+LR
Sbjct: 101 DVTGGLGTDELRLL---YGMALVRFVN--LISERKTKFAKVPLKCLAQEVNIPDWIVDLR 155
Query: 121 HLSTHERELPSLEMLRLCCKEAIQW 145
H TH +++P + R C + W
Sbjct: 156 HELTH-KKMPHINDCRRGCYFVLDW 179
>At5g12220 [R] KOG2425 Nuclear protein involved in cell morphogenesis and cell
surface growth
Length = 626
Score = 72.8 bits (177), Expect = 1e-12
Identities = 47/147 (31%), Positives = 81/147 (54%), Gaps = 10/147 (6%)
Query: 5 PWRSRSELEQLKQWLFVDDTPASKRRAIQRIDAYLTRGPYLPHIIEYTVRLMQCQLND-- 62
PW S E + +++ LF +P A++R+ + +RG LP ++ T L++ QL D
Sbjct: 32 PWLSWEEWDSVRESLF-SSSPDRIASALERVATWRSRGS-LPAPVDVTCSLIEIQLKDGF 89
Query: 63 -PGEAQDGDDM---EYLKWQYCMVLIRFVNGMLDPVQQAQFAIPLHTLAENIGLPSWFVE 118
P E Q D + L+ YCM ++R VN +++ ++ + + + A IG+P ++
Sbjct: 90 IPREKQSADALYSEHLLQMLYCMGILRLVNCVIEKTRRRE-DVSIADAARAIGIPRKLID 148
Query: 119 LRHLSTHERELPSLEMLRLCCKEAIQW 145
LRH +H RELP+L +LR EA++W
Sbjct: 149 LRHEGSH-RELPALSVLRDAADEALEW 174
>7294776 [R] KOG2425 Nuclear protein involved in cell morphogenesis and cell
surface growth
Length = 550
Score = 72.8 bits (177), Expect = 1e-12
Identities = 49/146 (33%), Positives = 73/146 (49%), Gaps = 11/146 (7%)
Query: 3 ITPWRSRSELEQLKQWLF-VDDTPASKRRAIQRIDAY-LTRGPYLPHIIEYTVRLMQCQL 60
+TPWR E +WLF +TPA+ R+A+ +I + L RG P + T L+Q L
Sbjct: 41 VTPWRDTLEFNTTYKWLFGKSNTPATWRQALSKIRIWCLRRGSLCPAAVLATSVLVQAHL 100
Query: 61 NDP-GEAQDGDDMEYLKWQYCMVLIRFVNGMLDPVQQAQFAIPLHTLAENIGLPSWFVEL 119
D G A+ D Y RF N M +Q + ++ A+ +GL S+ V+L
Sbjct: 101 EDQEGSAKIQDT-------YASAFTRFYNFMSSIIQGHNMS-SMYETAKELGLQSFIVDL 152
Query: 120 RHLSTHERELPSLEMLRLCCKEAIQW 145
RHL H +ELP +E+LR ++W
Sbjct: 153 RHLCAHGQELPPVEVLRNTSNHCLEW 178
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,509,054
Number of Sequences: 60738
Number of extensions: 964727
Number of successful extensions: 2799
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2786
Number of HSP's gapped (non-prelim): 9
length of query: 456
length of database: 30,389,216
effective HSP length: 110
effective length of query: 346
effective length of database: 23,708,036
effective search space: 8202980456
effective search space used: 8202980456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)