ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI1670 good C KOG3015 Energy production and conversion F1-ATP synthase assembly protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI1670 574178 573198 -327
(327 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJL180c [C] KOG3015 F1-ATP synthase assembly protein 370 e-102
SPAC9.12c [C] KOG3015 F1-ATP synthase assembly protein 150 2e-36
Hs21735485 [C] KOG3015 F1-ATP synthase assembly protein 75 1e-13
At5g40660 [C] KOG3015 F1-ATP synthase assembly protein 59 1e-08
>YJL180c [C] KOG3015 F1-ATP synthase assembly protein
Length = 325
Score = 370 bits (949), Expect = e-102
Identities = 189/314 (60%), Positives = 236/314 (74%), Gaps = 4/314 (1%)
Query: 10 LVSPTVLSRVRCYA-QASPLGVDHSIENNLQTETNRLSKTLTKFWEQVSLEETPEN--VT 66
+V+ L R Y+ A PLG D++IENN TETNRLSKT KFWE+VSL E +
Sbjct: 11 IVNSIRLKLPRFYSLNAQPLGTDNTIENNTPTETNRLSKTSQKFWEKVSLNRDVEKGKIA 70
Query: 67 IKLDSKPLRTPLGNPLTLPQSRKLLSVMVLNEWSNLPSLSVKPYVLPLTSLVSRCIDLEK 126
++LD + ++TPLGN + + ++ LL+ ++ EWS+L SLS+K + LPLTSLV+RCIDL+
Sbjct: 71 LQLDGRTIKTPLGNGIIVDNAKSLLAYLLKLEWSSLSSLSIKTHSLPLTSLVARCIDLQM 130
Query: 127 ANEDGVDPELVAKIGGNREKLTEGLLRYLDTDTLLVFSPANEYEGALRKAQDELYLPIIS 186
NE G DP+LVAKIGGN + + LLRYLDTDTLLVFSP NE+EG LR AQ+ELY+PII
Sbjct: 131 TNEPGCDPQLVAKIGGNSDVIKNQLLRYLDTDTLLVFSPMNEFEGRLRNAQNELYIPIIK 190
Query: 187 GVEKFLSQINKDKKEVKLQILDADLHGLRGNAQSGETREVAKQYLDSLSVWDLAIFEKTV 246
G+E+FL + + ++LQILDAD+HGLRGN QS + AK+Y+ SLS WDLAI EKTV
Sbjct: 191 GMEEFLRNFSSESN-IRLQILDADIHGLRGNQQSDIVKNAAKKYMSSLSPWDLAILEKTV 249
Query: 247 LTTKSFICGLLLLLNKSATVTNIPELQVSMEDIARAATLETIYQVERWGEVEDTHDVDKR 306
LTTKSFICG+LLL NK T IP L+ M++I RAATLETI+QVE+WGEVEDTHDVDKR
Sbjct: 250 LTTKSFICGVLLLENKKDTANLIPALKTDMDNIVRAATLETIFQVEKWGEVEDTHDVDKR 309
Query: 307 DVRRNIHAAAIVAF 320
D+RR IH AAI AF
Sbjct: 310 DIRRKIHTAAIAAF 323
>SPAC9.12c [C] KOG3015 F1-ATP synthase assembly protein
Length = 287
Score = 150 bits (380), Expect = 2e-36
Identities = 101/319 (31%), Positives = 163/319 (50%), Gaps = 47/319 (14%)
Query: 1 MLRLSRPFRLVSPTVLSRVRCYAQASPLGVDHSIENNLQTETNRLSKTLTKFWEQVSLEE 60
MLR + +RL S +LS CY+ S + + + +FW+ + +
Sbjct: 1 MLRSLQFYRLSSKNLLSFKTCYSFYST-----------KASSPLPQPSFRRFWKNTATKI 49
Query: 61 TPENVTIKLDSKPLRTPLGNPLTLPQSRKLLSVMVLNEWSNLPSLSVKPYVLPLTSLVSR 120
V I+LD + L++P G + +P+ +LL+ ++ EW LPS SV+ + LP+TSLVSR
Sbjct: 50 QNGEVLIQLDGRNLKSPSGKIVKVPKEMELLAHLIALEWDRLPSTSVRQHNLPITSLVSR 109
Query: 121 CIDLEKANEDGVDPELVAKIGGNREKLTEGLLRYLDTDTLLVFSPANEYEGALRKAQDEL 180
ID+ + ++ +E L+ L+R+LDTDT+L++SP EYEG L + Q E
Sbjct: 110 AIDISQFKKE------------EKELLSTQLIRFLDTDTILIYSPETEYEGKLLEEQKEN 157
Query: 181 YLPIISGVEKFLSQINKDKKEVKLQILDADLHGLRGNAQSGETREVAKQYLDSLSVWDLA 240
+ P L + ++K V+L LD D G+ + Q+ ET E + +L SL+ W LA
Sbjct: 158 WWP--------LKETFENKLGVQLSYLDGDA-GIIAHKQTQETHERIRNWLSSLNSWQLA 208
Query: 241 IFEKTVLTTKSFICGLLLLLNKSATVTNIPELQVSMEDIARAATLETIYQVERWGEVEDT 300
FE++V KSFI ++L ++ E A LE YQ RWG +ED
Sbjct: 209 AFERSVSCCKSFIVSFMILKG-----------YLNSEKAAALTNLELQYQTNRWGSLED- 256
Query: 301 HDVDKRDVRRNIHAAAIVA 319
D D++ + ++AI++
Sbjct: 257 ---DNEDLKNKLASSAILS 272
>Hs21735485 [C] KOG3015 F1-ATP synthase assembly protein
Length = 289
Score = 75.1 bits (183), Expect = 1e-13
Identities = 63/267 (23%), Positives = 115/267 (42%), Gaps = 43/267 (16%)
Query: 51 KFWEQVSLEETPENVTIKLDSKPLRTPLGNPLTLPQSRKLLSVMVLNEWSNLPSLSVKPY 110
+F++ VS+ + I LD + L+TP T+P + L++ V EW + ++K Y
Sbjct: 48 RFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPS--EALAIAVATEWDSQQD-TIKYY 104
Query: 111 VLPLTSLVSRCIDLEKANEDGVDPELVAKIGGNREKLTEGLLRYLDTDTLLVFSPANEYE 170
+ LT+L + +D N+++L +++LDTDT+ E
Sbjct: 105 TMHLTTLCNTSLDNPTQR--------------NKDQLIRAAVKFLDTDTICYRVEEPE-- 148
Query: 171 GALRKAQDELYLPIISGVEKFLSQINKDKKEVKLQILDADLHGLRGNAQSGETREVAKQY 230
L + Q + PII EK + + + + G + +TREV +
Sbjct: 149 -TLVELQRNEWDPIIEWAEK------------RYGVEISSSTSIMGPSIPAKTREVLVSH 195
Query: 231 LDSLSVWDLAIFEKTVLTTKSFICGLLLLLNKSATVTNIPELQVSMEDIARAATLETIYQ 290
L S + W L E KS + L L+ +L++++E + LE YQ
Sbjct: 196 LASYNTWALQGIEFVAAQLKSMVLTLGLI-----------DLRLTVEQAVLLSRLEEEYQ 244
Query: 291 VERWGEVEDTHDVDKRDVRRNIHAAAI 317
+++WG +E HD + +++R A +
Sbjct: 245 IQKWGNIEWAHDYELQELRARTAAGTL 271
>At5g40660 [C] KOG3015 F1-ATP synthase assembly protein
Length = 325
Score = 58.9 bits (141), Expect = 1e-08
Identities = 61/271 (22%), Positives = 114/271 (41%), Gaps = 45/271 (16%)
Query: 51 KFWEQVSLEETPENV--TIKLDSKPLRTPLGNPLTLPQSRKL-LSVMVLNEWSNLPSLSV 107
+F+++V+ E + T+ LD + L+TP PL L R L L+ + EW + +
Sbjct: 88 RFYKKVTTREADDGNGWTVMLDYRTLKTPSKRPLKL---RSLALAKAIAAEWEYQLTEGI 144
Query: 108 KPYVLPLTSLVSRCIDLEKANEDGVDPELVAKIGGNREKLTEGLLRYLDTDTLLVFSPA- 166
+P+ +PL L C LE+ + R K+ E L R + D + +P
Sbjct: 145 RPFTMPLMRLA--CTALER-------------VPLTRSKIIEHLSRKIHQDLVFFRAPED 189
Query: 167 NEYEGALRKAQDELYLPIISGVEKFLSQINKDKKEVKLQILDADLHGLRGNAQSGETREV 226
N+ + Q E P++ +E + VK ++ + + G Q + +
Sbjct: 190 NDLTSDVHDIQVESIDPLLEWIES--------EFRVKPKVYSS----IFGGKQDDKLVKA 237
Query: 227 AKQYLDSLSVWDLAIFEKTVLTTKSFICGLLLLLNKSATVTNIPELQVSMEDIARAATLE 286
++ L + +LA + + S + L + K + ++D + LE
Sbjct: 238 VEELLKKTNDGELASIDALQASAHSIVIALGIFCGK-----------LQIDDAIKLIRLE 286
Query: 287 TIYQVERWGEVEDTHDVDKRDVRRNIHAAAI 317
QV++WG VE HD+D D++ I +A +
Sbjct: 287 EDLQVDKWGLVEGGHDIDVADLKVQISSATV 317
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.133 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,727,460
Number of Sequences: 60738
Number of extensions: 768302
Number of successful extensions: 2265
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2253
Number of HSP's gapped (non-prelim): 4
length of query: 327
length of database: 30,389,216
effective HSP length: 107
effective length of query: 220
effective length of database: 23,890,250
effective search space: 5255855000
effective search space used: 5255855000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)