ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactI1671    good          O     KOG3501  Posttranslational modification, protein turnover, chaperones   Molecular chaperone Prefoldin, subunit 1

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactI1671 574472  574810 113  
         (113 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Hs21536449 [O] KOG3501 Molecular chaperone Prefoldin subunit 1         62   1e-10
HsM4505739 [O] KOG3501 Molecular chaperone Prefoldin subunit 1         60   5e-10
SPBC1D7.01c [O] KOG3501 Molecular chaperone Prefoldin subunit 1        58   2e-09

>Hs21536449 [O] KOG3501 Molecular chaperone Prefoldin subunit 1
          Length = 122

 Score = 62.0 bits (149), Expect = 1e-10
 Identities = 33/102 (32%), Positives = 62/102 (60%), Gaps = 1/102 (0%)

Query: 11  EMANSLRNSRSQLDMTLAQLEQLQRQKKIAKLTEKELGNYGNE-QVWRSCGKMFIRQEKQ 69
           E+   + +++ ++ +   Q+EQL R KK A LT+ E+    +E  ++   G+MFI Q K+
Sbjct: 15  ELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFILQSKE 74

Query: 70  AYTADLNHDERILDEQIKALEQKRHYLQTTVDNTVESLRRVI 111
           A  + L   ++I +E+IK LEQK+ YL+ +V    +++R ++
Sbjct: 75  AIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116


>HsM4505739 [O] KOG3501 Molecular chaperone Prefoldin subunit 1
          Length = 122

 Score = 60.1 bits (144), Expect = 5e-10
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 11  EMANSLRNSRSQLDMTLAQLEQLQRQKKIAKLTEKELGNYGNE-QVWRSCGKMFIRQEKQ 69
           E+   + +++ ++ +   Q+EQL R KK A LT+ E+    +E  ++   G+MFI Q K+
Sbjct: 15  ELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFILQSKE 74

Query: 70  AYTADLNHDERILDEQIKALEQKRHYLQTTVDNTVESLRRVI 111
           A  + L   ++I +E+IK LEQK+ YL+  +    +++R ++
Sbjct: 75  AIHSQLLEKQKIAEEKIKELEQKKSYLERRLKEAEDNIREML 116


>SPBC1D7.01c [O] KOG3501 Molecular chaperone Prefoldin subunit 1
          Length = 112

 Score = 58.2 bits (139), Expect = 2e-09
 Identities = 31/106 (29%), Positives = 62/106 (58%), Gaps = 1/106 (0%)

Query: 6   QDIVKEMANSLRNSRSQLDMTLAQLEQLQRQKKIAKLTEKELGNYGNEQ-VWRSCGKMFI 64
           Q++  ++     +S+ QL   + Q+   +R  KI++L +KEL + G ++ V+ S GKMF+
Sbjct: 2   QNLASQIQEKAVDSQQQLRTIMVQIAAKERALKISELAKKELEDVGEDKAVYTSLGKMFM 61

Query: 65  RQEKQAYTADLNHDERILDEQIKALEQKRHYLQTTVDNTVESLRRV 110
           + +  +    L+ +   L E I+AL++K+ Y +TT  N  + L+++
Sbjct: 62  KSDLASVRTHLDAEMASLREDIEALQKKQTYHETTASNAEQHLQKI 107


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.313    0.127    0.341 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,926,448
Number of Sequences: 60738
Number of extensions: 214465
Number of successful extensions: 957
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 954
Number of HSP's gapped (non-prelim): 3
length of query: 113
length of database: 30,389,216
effective HSP length: 89
effective length of query: 24
effective length of database: 24,983,534
effective search space: 599604816
effective search space used: 599604816
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)