ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI1680 good J KOG3353 Translation, ribosomal structure and biogenesis 60S ribosomal protein L22
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI1680 576887 577210 108
(108 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJL177w [J] KOG3353 60S ribosomal protein L22 197 2e-51
YKL180w [J] KOG3353 60S ribosomal protein L22 196 4e-51
SPBC2F12.04 [J] KOG3353 60S ribosomal protein L22 127 3e-30
SPCC364.03 [J] KOG3353 60S ribosomal protein L22 126 4e-30
Hs4506617 [J] KOG3353 60S ribosomal protein L22 116 6e-27
Hs13653804 [J] KOG3353 60S ribosomal protein L22 114 2e-26
Hs22051019 [J] KOG3353 60S ribosomal protein L22 111 1e-25
7290748 [J] KOG3353 60S ribosomal protein L22 111 1e-25
At1g67430 [J] KOG3353 60S ribosomal protein L22 104 2e-23
CE22195 [J] KOG3353 60S ribosomal protein L22 103 3e-23
At1g27400 [J] KOG3353 60S ribosomal protein L22 103 4e-23
Hs20470456 [J] KOG3353 60S ribosomal protein L22 99 7e-22
Hs13645542 [J] KOG3353 60S ribosomal protein L22 94 2e-20
Hs20556333 [J] KOG3353 60S ribosomal protein L22 69 1e-12
ECU07g1410 [J] KOG3353 60S ribosomal protein L22 64 5e-11
Hs22063048 [J] KOG3353 60S ribosomal protein L22 61 3e-10
Hs18559477 [J] KOG3353 60S ribosomal protein L22 55 1e-08
Hs17436951 [J] KOG3353 60S ribosomal protein L22 46 7e-06
>YJL177w [J] KOG3353 60S ribosomal protein L22
Length = 184
Score = 197 bits (502), Expect = 2e-51
Identities = 98/103 (95%), Positives = 101/103 (97%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
MARYGATSTNPAKSASARGSYLRVS+KNTRETAQAI+GW L KAQKYLDQVLDHQRAIPF
Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLDQVLDHQRAIPF 60
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAE 103
RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAA+NAE
Sbjct: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAE 103
>YKL180w [J] KOG3353 60S ribosomal protein L22
Length = 184
Score = 196 bits (498), Expect = 4e-51
Identities = 97/103 (94%), Positives = 101/103 (97%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
MARYGATSTNPAKSASARGSYLRVS+KNTRETAQAI+GW L KAQKYL+QVLDHQRAIPF
Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPF 60
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAE 103
RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAA+NAE
Sbjct: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAE 103
>SPBC2F12.04 [J] KOG3353 60S ribosomal protein L22
Length = 187
Score = 127 bits (318), Expect = 3e-30
Identities = 61/103 (59%), Positives = 77/103 (74%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
M RY A+ K A ARG+YLR +KN+RE A I+G +L+KA +LD V +H++A+PF
Sbjct: 1 MVRYSASPALETKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPF 60
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAE 103
RRFN +GRTAQGKEFGVT+ARWP KSVKF LL+NA +NAE
Sbjct: 61 RRFNGGVGRTAQGKEFGVTQARWPVKSVKFFYDLLKNAEANAE 103
>SPCC364.03 [J] KOG3353 60S ribosomal protein L22
Length = 187
Score = 126 bits (317), Expect = 4e-30
Identities = 61/103 (59%), Positives = 75/103 (72%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
M RY A K A ARG+YLR +KN+RE A I+G NL+KA +LD V +H++A+PF
Sbjct: 1 MVRYSAAPALETKCAKARGAYLRTHFKNSREVAFTINGMNLKKAFIFLDNVKEHKQAVPF 60
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAE 103
RRFN +GRTAQGKEFGVT+ARWP KSV F LL+NA +NAE
Sbjct: 61 RRFNGGVGRTAQGKEFGVTQARWPVKSVNFFYDLLKNAEANAE 103
>Hs4506617 [J] KOG3353 60S ribosomal protein L22
Length = 184
Score = 116 bits (290), Expect = 6e-27
Identities = 55/104 (52%), Positives = 73/104 (69%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
M RY NP KS +RGS LRV +KNTRETAQAI G +++KA KYL V ++ +PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAEV 104
RR+N +GR AQ K++G T+ RWP KS +F+ +L+NA SNAE+
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAEL 104
>Hs13653804 [J] KOG3353 60S ribosomal protein L22
Length = 184
Score = 114 bits (285), Expect = 2e-26
Identities = 54/104 (51%), Positives = 72/104 (68%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
M RY NP KS +RGS LRV +KNTRETAQAI G +++KA KYL V ++ +PF
Sbjct: 1 MVRYSLDPENPTKSGKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAEV 104
R +N +GR AQ K++G T+ RWP KS +F+ +L+NA SNAE+
Sbjct: 61 RHYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAEL 104
>Hs22051019 [J] KOG3353 60S ribosomal protein L22
Length = 111
Score = 111 bits (278), Expect = 1e-25
Identities = 54/104 (51%), Positives = 69/104 (65%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
M RY NP KS +RGS LRV +KNTRETAQAI G +QK KYL V ++ IPF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMYIQKGTKYLKDVTLQKQCIPF 60
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAEV 104
R +N +GR AQ K++G T+ RWP KS +F+ +L+N SNAE+
Sbjct: 61 RHYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHVLKNTESNAEL 104
>7290748 [J] KOG3353 60S ribosomal protein L22
Length = 186
Score = 111 bits (278), Expect = 1e-25
Identities = 54/103 (52%), Positives = 70/103 (67%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
M RY S N AKS ARG LRV +KNT ETAQAI L++AQ+YL V+D + +PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAE 103
RRFN +GR AQ K++ T+ RWP KS +F+ LL+NA +NA+
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANAD 103
>At1g67430 [J] KOG3353 60S ribosomal protein L22
Length = 175
Score = 104 bits (259), Expect = 2e-23
Identities = 57/105 (54%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
M +Y N KS ARGS LRV +KNTRETA AI L KA++YL+ V+ H++AIPF
Sbjct: 1 MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60
Query: 61 RRFNSSIGRTAQGK-EFGVTKARWPAKSVKFVQGLLQNAASNAEV 104
RF +GRTAQ K + RWPAKS +FV LL+NA SNAEV
Sbjct: 61 TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEV 105
>CE22195 [J] KOG3353 60S ribosomal protein L22
Length = 187
Score = 103 bits (258), Expect = 3e-23
Identities = 50/100 (50%), Positives = 65/100 (65%)
Query: 4 YGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPFRRF 63
Y N KS ARGS LRV +KNT E A A+ G L++AQ +L+ V +H+ +PFRRF
Sbjct: 6 YSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRF 65
Query: 64 NSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAE 103
+ IGR AQ K++ T+ RWP KS F+ LL+NA SNAE
Sbjct: 66 HGGIGRAAQTKQWNTTQGRWPVKSADFLLDLLKNAESNAE 105
>At1g27400 [J] KOG3353 60S ribosomal protein L22
Length = 176
Score = 103 bits (257), Expect = 4e-23
Identities = 56/105 (53%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
M +Y N KS ARG+ LRV +KNTRETA AI L KA++YL+ V+ H++AIPF
Sbjct: 1 MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60
Query: 61 RRFNSSIGRTAQGK-EFGVTKARWPAKSVKFVQGLLQNAASNAEV 104
RF +GRTAQ K + RWPAKS +FV LL+NA SNAEV
Sbjct: 61 TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEV 105
>Hs20470456 [J] KOG3353 60S ribosomal protein L22
Length = 181
Score = 99.4 bits (246), Expect = 7e-22
Identities = 50/103 (48%), Positives = 67/103 (64%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
M Y NPAKS +RGS LRV +KNTRETAQAI +++KA KYL V ++ +PF
Sbjct: 1 MVHYSLDPENPAKSCKSRGSNLRVHFKNTRETAQAIMDMHVRKATKYLKDVTLQKQCVPF 60
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAE 103
R +N +GR Q K++G T+ P KS +F+ +L+NA SNAE
Sbjct: 61 RHYNGRVGRCTQAKQWGWTQNWCPKKSAEFLLHMLKNAESNAE 103
>Hs13645542 [J] KOG3353 60S ribosomal protein L22
Length = 144
Score = 94.4 bits (233), Expect = 2e-20
Identities = 45/87 (51%), Positives = 63/87 (71%)
Query: 18 RGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPFRRFNSSIGRTAQGKEFG 77
+ S LRV +KNT ETAQAI G +++KA KYL V ++ +PFRR+N+ +GR AQ K++G
Sbjct: 4 KSSNLRVHFKNTCETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNAGVGRCAQAKQWG 63
Query: 78 VTKARWPAKSVKFVQGLLQNAASNAEV 104
T RWP KS +F+ +L+NA SNAE+
Sbjct: 64 WTLFRWPRKSAEFLLHMLKNAESNAEL 90
>Hs20556333 [J] KOG3353 60S ribosomal protein L22
Length = 147
Score = 68.9 bits (167), Expect = 1e-12
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 18/104 (17%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
M Y N KS +RGS LRV +KNTRETAQ G +++KA KYL V ++ +PF
Sbjct: 1 MVHYLLDPENHTKSCKSRGSNLRVHFKNTRETAQDTKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAEV 104
+R+N+ +G S +F+ +L+NA S+AE+
Sbjct: 61 QRYNAGVG------------------SAEFLLHMLKNAESDAEL 86
>ECU07g1410 [J] KOG3353 60S ribosomal protein L22
Length = 183
Score = 63.5 bits (153), Expect = 5e-11
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 20/121 (16%)
Query: 3 RYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPFRR 62
+Y +P+K+ A+ +VS+K TRE + + + A +YL V+ +PFRR
Sbjct: 4 KYSYEIHDPSKAVKAKIDNAKVSFKKTREASCTLRRRKVLDAIQYLKNVIAKTECVPFRR 63
Query: 63 FNSSIGRTAQGKEFGV--------------------TKARWPAKSVKFVQGLLQNAASNA 102
+N G+T Q ++F + T+ RWP KS +F+ +L+N NA
Sbjct: 64 YNRGCGQTHQARKFSIPRREIVKANGEKKIKKGHVQTRGRWPKKSAEFLISVLENIKENA 123
Query: 103 E 103
E
Sbjct: 124 E 124
>Hs22063048 [J] KOG3353 60S ribosomal protein L22
Length = 154
Score = 60.8 bits (146), Expect = 3e-10
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 34 QAISGWNLQKAQKYLDQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQG 93
QAI ++QKA KYL V ++ +PF+ +N +GR AQ K +G + RWP KS F+
Sbjct: 4 QAIKRMHIQKATKYLKDVTLQKQCVPFQCYNGGVGRGAQAKHWGWAQGRWPKKSADFLLH 63
Query: 94 LLQNA 98
+L+NA
Sbjct: 64 MLKNA 68
>Hs18559477 [J] KOG3353 60S ribosomal protein L22
Length = 157
Score = 55.5 bits (132), Expect = 1e-08
Identities = 34/104 (32%), Positives = 48/104 (45%), Gaps = 27/104 (25%)
Query: 1 MARYGATSTNPAKSASARGSYLRVSYKNTRETAQAISGWNLQKAQKYLDQVLDHQRAIPF 60
M R +P KS +RGS LRV + NT E + G
Sbjct: 1 MIRSSLDPESPTKSCKSRGSSLRVHFTNTCEMPRPSGG---------------------- 38
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAEV 104
+G+ AQ K++G T+ RWP KS +F+ +L+NA SNAE+
Sbjct: 39 -----GVGKCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAEL 77
>Hs17436951 [J] KOG3353 60S ribosomal protein L22
Length = 390
Score = 46.2 bits (108), Expect = 7e-06
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAASNAEV 104
R +NS +GR K++G T RWP KS KF+ + +NA S+AE+
Sbjct: 42 RHYNSGVGRCVWAKQWGWTLGRWPKKSAKFLLHMCKNAESHAEL 85
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.126 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,201,008
Number of Sequences: 60738
Number of extensions: 160126
Number of successful extensions: 417
Number of sequences better than 1.0e-05: 18
Number of HSP's better than 0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 395
Number of HSP's gapped (non-prelim): 19
length of query: 108
length of database: 30,389,216
effective HSP length: 84
effective length of query: 24
effective length of database: 25,287,224
effective search space: 606893376
effective search space used: 606893376
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)