ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactI1791    suspect: LH   C     KOG4116  Energy production and conversion                               Ubiquinol cytochrome c reductase, subunit QCR8

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactI1791 611055  611336 94   
         (94 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YJL166w [C] KOG4116 Ubiquinol cytochrome c reductase subunit QCR8     152   8e-38
SPAC1782.07 [C] KOG4116 Ubiquinol cytochrome c reductase subunit...    80   4e-16

>YJL166w [C] KOG4116 Ubiquinol cytochrome c reductase subunit QCR8
          Length = 94

 Score =  152 bits (384), Expect = 8e-38
 Identities = 66/94 (70%), Positives = 75/94 (79%)

Query: 1  MGGPHAKAYMGWWGSIGSPAQKGITTYTVSPYAQKPLNNIFHNAVFNTFRRVKSQILYMA 60
          MG P  K YMGWWG +G P QKGIT+Y VSPYAQKPL  IFHNAVFN+FRR KSQ LY+ 
Sbjct: 1  MGPPSGKTYMGWWGHMGGPKQKGITSYAVSPYAQKPLQGIFHNAVFNSFRRFKSQFLYVL 60

Query: 61 LPAALYWAWWVNCRDYNAYLYTKAGREELERVNV 94
          +PA +YW WW N  +YN +LY+KAGREELERVNV
Sbjct: 61 IPAGIYWYWWKNGNEYNEFLYSKAGREELERVNV 94


>SPAC1782.07 [C] KOG4116 Ubiquinol cytochrome c reductase subunit QCR8
          Length = 92

 Score = 80.5 bits (197), Expect = 4e-16
 Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 4/91 (4%)

Query: 2  GGPHAKAYMGWWGSIGSPAQKGITTYTVSPYAQKPLNNIFHNAVFNTFRRVKSQILYMAL 61
          G    K Y+GWWG +G P QKGI TY++SP+ Q+P+   F  +  N FRRV ++ LY+A+
Sbjct: 3  GAAGGKTYLGWWGHLGGPKQKGIITYSLSPFQQRPMAGFFKTSTQNMFRRVMTEGLYVAI 62

Query: 62 PAALYWAWWVNC--RDYNAYLYTKAGREELE 90
          P  +  A+++ C  ++ N +L +K GR  +E
Sbjct: 63 PFGI--AYYIYCWGKERNEFLNSKHGRHLVE 91


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.322    0.135    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,933,585
Number of Sequences: 60738
Number of extensions: 213433
Number of successful extensions: 570
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 568
Number of HSP's gapped (non-prelim): 2
length of query: 94
length of database: 30,389,216
effective HSP length: 70
effective length of query: 24
effective length of database: 26,137,556
effective search space: 627301344
effective search space used: 627301344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)