ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI2016 good O KOG2661 Posttranslational modification, protein turnover, chaperones Peptidase family M48
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI2016 687735 688769 345
(345 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YKR087c [O] KOG2661 Peptidase family M48 420 e-117
SPAP14E8.04 [O] KOG2661 Peptidase family M48 214 2e-55
Hs21686999 [O] KOG2661 Peptidase family M48 126 5e-29
At5g51740 [O] KOG2661 Peptidase family M48 103 4e-22
>YKR087c [O] KOG2661 Peptidase family M48
Length = 314
Score = 420 bits (1079), Expect = e-117
Identities = 200/313 (63%), Positives = 251/313 (79%), Gaps = 7/313 (2%)
Query: 15 RFYNTPIPRVTYKRFNG---RTGNSFTQLLFDKTSRKYLAIVFGTGSLFYLTHLEEAPVT 71
R+ N P +Y+RFN +SF +L DK+SRKYLA++FG SLFY THL++APV+
Sbjct: 3 RYDNGP----SYRRFNNGEYSQKSSFKSILLDKSSRKYLALLFGGCSLFYYTHLDKAPVS 58
Query: 72 ARTRFIWLPRSLELKIGQYTYNSVLSETKGKILPESHPLTRKVTKIFHRIVEAAEHDPSV 131
R+RFIW+ R LEL IG YTY S+ +T+ +ILP HPL+ K+ IF +IVEAA DPSV
Sbjct: 59 DRSRFIWVSRPLELTIGNYTYKSIWRQTQQEILPPQHPLSIKIENIFMKIVEAAYKDPSV 118
Query: 132 DQSLLKDVQWKIHIVNDPRAPPNAFVLPGGKVFVFSNILPICQNEDGLATVLSHEFAHQL 191
D SLL ++W+IH+VNDP A PNAFVLPGGKVF+FS+ILPIC N+DG+ATVL+HEFAHQL
Sbjct: 119 DNSLLDGIKWEIHVVNDPTASPNAFVLPGGKVFIFSSILPICANDDGIATVLAHEFAHQL 178
Query: 192 ARHTAENLSKAPAYSILGALIYAVTGLDGINRLLVDGLVRMPASREMETEADYIGLMVMS 251
ARHTAENLSKAP YS+LG ++Y VTG IN +L+DG +RMPASR+METEADYIGLM+MS
Sbjct: 179 ARHTAENLSKAPIYSLLGLVLYTVTGAHAINNILLDGFLRMPASRQMETEADYIGLMIMS 238
Query: 252 RACFHPEESLKVWQRMAAMEEQQKRRGMVNVEFLSTHPATTRRIENMAKWLPKSQELYSQ 311
RACF P+ES+KVW+RMA E+Q R G+VN+EFLSTHPA+TRRIENM+KWLPK+ E+Y Q
Sbjct: 239 RACFQPQESIKVWERMANFEKQMNRGGVVNMEFLSTHPASTRRIENMSKWLPKANEIYEQ 298
Query: 312 ANCGNFGGFYNSF 324
++C + G +Y SF
Sbjct: 299 SDCSSMGNYYKSF 311
>SPAP14E8.04 [O] KOG2661 Peptidase family M48
Length = 337
Score = 214 bits (544), Expect = 2e-55
Identities = 123/308 (39%), Positives = 181/308 (57%), Gaps = 29/308 (9%)
Query: 13 QARFYNTPIP-----RVTYKRFNGRTGNSFTQLLFDKTSRKYLAIVFGTGSLFYLTHLEE 67
QARF + + RV YK F + Q +F A++ G G ++Y THLE
Sbjct: 37 QARFQSNNLSWSNRNRVVYKSFQPNPRDKRFQWIFG-------ALIAG-GGVYYFTHLEY 88
Query: 68 APVTARTRFIWLPRSLELKIGQYTYNSVLSETKGKILPESHPLTRKVTKIFHRIVEAAEH 127
P++ R RF + E ++ Q Y V+SE ++LP HP T V+++ RI+
Sbjct: 89 VPISNRRRFNDVSLDFEKRMAQDAYKEVMSEYGDRMLPSYHPTTLYVSRVLKRIIAV--- 145
Query: 128 DPSVDQSLLKDVQWKIHIVNDPRAPPNAFVLPGGKVFVFSNILPICQNEDGLATVLSHEF 187
S + D++W++H++ DP PNAFVLPGGKVFVF ILP+C+ EDGLA VL+HE
Sbjct: 146 ------SGMSDLKWELHVIRDPT--PNAFVLPGGKVFVFEGILPMCKGEDGLAAVLAHET 197
Query: 188 AHQLARHTAENLSKAPAYSILGALIYAVTGLDG-INRLLVDGLVRMPASREMETEADYIG 246
AHQ+ARH+AE ++ A S + L A L G ++ L++ + +P SR+METEADYIG
Sbjct: 198 AHQVARHSAEKIAFTRAVSCIVFLAAASLDLSGQLSHFLLNFGLLLPFSRKMETEADYIG 257
Query: 247 LMVMSRACFHPEESLKVWQRMAAMEEQQKRRGMVNVEFLSTHPATTRRIENMAKWLPKSQ 306
LM+MS+ACF P + +W+RM A E Q + + F STHP++ +RI + +WLP++Q
Sbjct: 258 LMLMSQACFDPNAAKTLWERMDAAEGQMGKA----LAFASTHPSSKKRIRKIEEWLPEAQ 313
Query: 307 ELYSQANC 314
++C
Sbjct: 314 VKRETSDC 321
>Hs21686999 [O] KOG2661 Peptidase family M48
Length = 524
Score = 126 bits (316), Expect = 5e-29
Identities = 79/267 (29%), Positives = 133/267 (49%), Gaps = 20/267 (7%)
Query: 59 LFYLTHLEEAPVTARTRFIWLPRSLELKIGQYTYNSVLSETKGKILPESHPLTRKVTKIF 118
+FY THLE +P+T R++ + L + + + Y + + E K +L E V ++
Sbjct: 208 VFYFTHLEVSPITGRSKLLLLGKEQFRLLSELEYEAWMEEFKNDMLTEKDARYLAVKEVL 267
Query: 119 HRIVEAAEHDPSVDQSLLKDVQWKIHIVNDPRAPPNAFVLPGGKVFVFSNILPICQNEDG 178
++E + P + Q + W IH+V+ P NAFVLP G++FVF+ L +
Sbjct: 268 CHLIECNKDVPGISQ-----INWVIHVVDSPII--NAFVLPNGQMFVFTGFLNSVTDIHQ 320
Query: 179 LATVLSHEFAHQLARHTAENLSKAPAYSILG----ALIYAVTGLDGINRL-------LVD 227
L+ +L HE AH + H AE LG +I+A+ D + L L +
Sbjct: 321 LSFLLGHEIAHAVLGHAAEKAGMVHLLDFLGMIFLTMIWAICPRDSLALLCQWIQSKLQE 380
Query: 228 GLVRMPASREMETEADYIGLMVMSRACFHPEESLKVWQRMAAMEEQQKRRGMVNVEFLST 287
+ P SR++E EAD IGL++ ++AC S WQ+M ++ + M E+LST
Sbjct: 381 YMFNRPYSRKLEAEADKIGLLLAAKACADIRASSVFWQQMEFVDSLHGQPKM--PEWLST 438
Query: 288 HPATTRRIENMAKWLPKSQELYSQANC 314
HP+ R+E + + +P++ ++ NC
Sbjct: 439 HPSHGNRVEYLDRLIPQALKIREMCNC 465
>At5g51740 [O] KOG2661 Peptidase family M48
Length = 485
Score = 103 bits (257), Expect = 4e-22
Identities = 61/187 (32%), Positives = 109/187 (57%), Gaps = 11/187 (5%)
Query: 134 SLLKDVQWKIHIVNDPRAPPNAFVLPGGKVFVFSNILPICQNEDGLATVLSHEFAHQLAR 193
S L+ + W++ +VN+P NAF LP GK+ VF+ +L +++ +ATV+ HE H +AR
Sbjct: 303 SHLEGISWEVLVVNEPIV--NAFCLPAGKIVVFTGLLNHFKSDAEVATVIGHEVGHAVAR 360
Query: 194 HTAENLSKAPAYSILGALIYAVTGLDGINRLLVDGLVRMPASREMETEADYIGLMVMSRA 253
H AE ++K ++IL ++Y D +N + +R+P SR+ME EADYIGL++++ A
Sbjct: 361 HVAEGITKNLWFAILQLVLYQFVMPDLVNTMSA-LFLRLPFSRKMEIEADYIGLLLLASA 419
Query: 254 CFHPEESLKVWQRMAAMEEQQKRRGMVNVEFLSTHPATTRRIENMAK--WLPKSQELYSQ 311
+ P + V++++ K G ++LSTHP+ +R + +A+ + ++ +Y +
Sbjct: 420 GYDPRVAPTVYEKLG------KLGGDALGDYLSTHPSGKKRSKLLAQANVMEEALMIYRE 473
Query: 312 ANCGNFG 318
G G
Sbjct: 474 VQAGRTG 480
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,322,530
Number of Sequences: 60738
Number of extensions: 896368
Number of successful extensions: 1961
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1946
Number of HSP's gapped (non-prelim): 5
length of query: 345
length of database: 30,389,216
effective HSP length: 107
effective length of query: 238
effective length of database: 23,890,250
effective search space: 5685879500
effective search space used: 5685879500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)