ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI2053 good F KOG0673 Nucleotide transport and metabolism Thymidylate synthase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI2053 698626 699561 312
(312 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR074c [F] KOG0673 Thymidylate synthase 429 e-120
SPAC15E1.04_2 [F] KOG0673 Thymidylate synthase 414 e-115
7295876 [F] KOG0673 Thymidylate synthase 392 e-109
Hs4507751 [F] KOG0673 Thymidylate synthase 373 e-103
At4g34570_2 [F] KOG0673 Thymidylate synthase 365 e-101
CE24124 [F] KOG0673 Thymidylate synthase 363 e-100
At2g16370_2 [F] KOG0673 Thymidylate synthase 363 e-100
ECU01g1430 [F] KOG0673 Thymidylate synthase 337 1e-92
ECU01g0180 [F] KOG0673 Thymidylate synthase 337 1e-92
ECU08g0090 [F] KOG0673 Thymidylate synthase 337 1e-92
At2g21550_2 [F] KOG0673 Thymidylate synthase 206 5e-53
>YOR074c [F] KOG0673 Thymidylate synthase
Length = 259
Score = 429 bits (1102), Expect = e-120
Identities = 210/302 (69%), Positives = 232/302 (76%), Gaps = 47/302 (15%)
Query: 13 LEAVNAEEQQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVF 72
++ N EE+QYLDLC+RII+EGEFRPDRTGT
Sbjct: 3 MDGKNKEEEQYLDLCKRIIDEGEFRPDRTGT----------------------------- 33
Query: 73 TKGIILELLWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWR 132
D LSEQGVKIW+GNGSREYLD +G DR+ GDLGPVYGFQWR
Sbjct: 34 ----------------DANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWR 77
Query: 133 HFGAEYKTCDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQ 192
HFGA+YKTCDDDY+GQG+DQLK++IHKLKTNPYDRRII+SAWNP DF KMALPPCH+FSQ
Sbjct: 78 HFGAKYKTCDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQ 137
Query: 193 FYVSFPK-GEGA-KPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHT 250
FYVSFPK GEG+ KPRLSC+LYQRSCDMGLGVPFNIASYALLT+MIA V DMEPGEFIHT
Sbjct: 138 FYVSFPKEGEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHT 197
Query: 251 LGDAHVYKDHVDALRTQIAREPRAFPKLKIKRNVSDIDDFKYEDFEITDYNPHGKIQMKM 310
LGDAHVYKDH+DAL+ QI R PR FPKLKIKR+V DIDDFK DFEI DYNPH +IQMKM
Sbjct: 198 LGDAHVYKDHIDALKEQITRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKM 257
Query: 311 SV 312
SV
Sbjct: 258 SV 259
>SPAC15E1.04_2 [F] KOG0673 Thymidylate synthase
Length = 299
Score = 414 bits (1063), Expect = e-115
Identities = 192/299 (64%), Positives = 235/299 (78%), Gaps = 3/299 (1%)
Query: 17 NAEEQQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGI 76
N EE+QYL+L I+ G+ RPDRTGTGT S+FAPPQLRF+L N+T PLLTTKRVF +G+
Sbjct: 1 NTEEEQYLNLIRYILENGQSRPDRTGTGTRSVFAPPQLRFSLRNNTLPLLTTKRVFLRGV 60
Query: 77 ILELLWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGA 136
+ ELLWF+ G T+ LSE+G+ IW+GNGSRE+LDS GLTDR+ GDLGP+YGFQWRHFGA
Sbjct: 61 LEELLWFIHGDTNANHLSEKGIHIWDGNGSREFLDSRGLTDRKVGDLGPIYGFQWRHFGA 120
Query: 137 EYKTCDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVS 196
+Y CD DY+ +GVDQL ++I LK NPYDRRIILSAWNP P+MALPPCH+F QFYVS
Sbjct: 121 QYVDCDTDYTNKGVDQLAQVISTLKLNPYDRRIILSAWNPLAIPEMALPPCHIFCQFYVS 180
Query: 197 FPKGEGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHV 256
P G KP+LS ++YQRS DMGLGVPFNIASY+LLT MIA +C E EF+H +GD H+
Sbjct: 181 EPCKPGGKPQLSSMMYQRSADMGLGVPFNIASYSLLTHMIAHMCGYEAAEFVHVMGDCHI 240
Query: 257 YKDHVDALRTQIAREPRAFPKLKIKRNVSD---IDDFKYEDFEITDYNPHGKIQMKMSV 312
Y DH++AL+TQ+ R P+AFPKL KR+ D ID F +DF + YNP+G I+MKMSV
Sbjct: 241 YNDHLEALQTQLERVPKAFPKLFFKRDAKDIGSIDSFSVDDFAVEGYNPYGPIKMKMSV 299
>7295876 [F] KOG0673 Thymidylate synthase
Length = 321
Score = 392 bits (1008), Expect = e-109
Identities = 190/297 (63%), Positives = 227/297 (75%), Gaps = 7/297 (2%)
Query: 16 VNAEEQQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKG 75
VN +E YLDL II GE R DRT GT S+F Q+RF++ N +FPLLTTKRVF +
Sbjct: 32 VNRDEMHYLDLLRHIIANGEQRMDRTEVGTLSVFGS-QMRFDMRN-SFPLLTTKRVFFRA 89
Query: 76 IILELLWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFG 135
+ ELLWFVAG TD K L + V IW+GN SRE+LD +G T R GDLGPVYGFQWRHFG
Sbjct: 90 VAEELLWFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFG 149
Query: 136 AEYKTCDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYV 195
A+Y TCDDDYSG+G+DQL+++I ++ NP DRRII+SAWNP D PKMALPPCH +QFYV
Sbjct: 150 AQYGTCDDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYV 209
Query: 196 SFPKGEGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAH 255
S +GE LSC LYQRS DMGLGVPFNIASYALLT MIA V ++PG+F+HT+GD H
Sbjct: 210 SEKRGE-----LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTH 264
Query: 256 VYKDHVDALRTQIAREPRAFPKLKIKRNVSDIDDFKYEDFEITDYNPHGKIQMKMSV 312
VY +HV+ L+ Q+ R PR FPKL IKR V DI+DF++EDF+I DYNPH KIQM M+V
Sbjct: 265 VYLNHVEPLKEQLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321
>Hs4507751 [F] KOG0673 Thymidylate synthase
Length = 313
Score = 373 bits (958), Expect = e-103
Identities = 183/293 (62%), Positives = 220/293 (74%), Gaps = 9/293 (3%)
Query: 20 EQQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGIILE 79
E QYL + I+ G + DRTGTGT S+F Q R++L D FPLLTTKRVF KG++ E
Sbjct: 30 ELQYLGQIQHILRCGVRKDDRTGTGTLSVFGM-QARYSL-RDEFPLLTTKRVFWKGVLEE 87
Query: 80 LLWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYK 139
LLWF+ G T+ K+LS +GVKIW+ NGSR++LDSLG + R EGDLGPVYGFQWRHFGAEY+
Sbjct: 88 LLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYR 147
Query: 140 TCDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVSFPK 199
+ DYSGQGVDQL+ +I +KTNP DRRII+ AWNP D P MALPPCH QFYV
Sbjct: 148 DMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYV---- 203
Query: 200 GEGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHVYKD 259
LSC LYQRS DMGLGVPFNIASYALLT MIA + ++PG+FIHTLGDAH+Y +
Sbjct: 204 ---VNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLN 260
Query: 260 HVDALRTQIAREPRAFPKLKIKRNVSDIDDFKYEDFEITDYNPHGKIQMKMSV 312
H++ L+ Q+ REPR FPKL+I R V IDDFK EDF+I YNPH I+M+M+V
Sbjct: 261 HIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313
>At4g34570_2 [F] KOG0673 Thymidylate synthase
Length = 286
Score = 365 bits (937), Expect = e-101
Identities = 176/294 (59%), Positives = 219/294 (73%), Gaps = 9/294 (3%)
Query: 19 EEQQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGIIL 78
EE YL+L + II+ G + DRTGTGT S F Q++FNL + FPLLTTKRVF +G++
Sbjct: 2 EEYLYLNLVKEIISNGNLKDDRTGTGTLSKFGC-QMKFNLRRN-FPLLTTKRVFWRGVVE 59
Query: 79 ELLWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEY 138
ELLWF++G T+ K L E+G++IW+GN SR YLD +GLT+R EGDLGPVYGFQWRHFGA+Y
Sbjct: 60 ELLWFISGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKY 119
Query: 139 KTCDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVSFP 198
DY+GQG DQL ++I+K+K NP DRRII+SAWNP D MALPPCH+F+QFYV
Sbjct: 120 TDMHADYTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYV--- 176
Query: 199 KGEGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHVYK 258
A LSC +YQRS DMGLGVPFNIASY+LLT ++A VCD+ PG+FIH +GDAHVYK
Sbjct: 177 ----ANGELSCQMYQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYK 232
Query: 259 DHVDALRTQIAREPRAFPKLKIKRNVSDIDDFKYEDFEITDYNPHGKIQMKMSV 312
+HV L+ Q+ P+ FP LKI DID F +DFE+ Y+PH KI MKM+V
Sbjct: 233 NHVRPLQEQLENPPKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 286
>CE24124 [F] KOG0673 Thymidylate synthase
Length = 312
Score = 363 bits (933), Expect = e-100
Identities = 182/306 (59%), Positives = 220/306 (71%), Gaps = 9/306 (2%)
Query: 8 VKRVKLEA-VNAEEQQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLL 66
VK V+ + +N +E +YL E+I+ EG R DRTGTGT S+F Q ++ L N T PLL
Sbjct: 15 VKTVQQQVHLNQDEYKYLKQVEQILREGTRRDDRTGTGTISIFGM-QSKYCLRNGTIPLL 73
Query: 67 TTKRVFTKGIILELLWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPV 126
TTKRV+ KG++ ELLWF++G TDGK L E+ VKIWE NG R +LD+LG T R EGDLGPV
Sbjct: 74 TTKRVYWKGVLEELLWFISGSTDGKLLMEKNVKIWEKNGDRAFLDNLGFTSREEGDLGPV 133
Query: 127 YGFQWRHFGAEYKTCDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPP 186
YGFQWRHFGA+Y C DYSGQGVDQL E+I ++K P RRII+SAWNP D +M LPP
Sbjct: 134 YGFQWRHFGAKYVDCHTDYSGQGVDQLAEVIRQIKEQPDSRRIIMSAWNPSDLGQMVLPP 193
Query: 187 CHVFSQFYVSFPKGEGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGE 246
CH QFYV GE LSC LYQRS DMGLGVPFN+ASY LLT MIA VC ++PG
Sbjct: 194 CHTMCQFYVD--NGE-----LSCQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKPGT 246
Query: 247 FIHTLGDAHVYKDHVDALRTQIAREPRAFPKLKIKRNVSDIDDFKYEDFEITDYNPHGKI 306
+HTLGDAHVY +HVDAL+ Q+ REP AFPK++ R+V+ IDDF + + DY H KI
Sbjct: 247 LVHTLGDAHVYSNHVDALKIQLDREPYAFPKIRFTRDVASIDDFTSDMIALDDYKCHPKI 306
Query: 307 QMKMSV 312
M M+V
Sbjct: 307 PMDMAV 312
>At2g16370_2 [F] KOG0673 Thymidylate synthase
Length = 285
Score = 363 bits (932), Expect = e-100
Identities = 177/294 (60%), Positives = 218/294 (73%), Gaps = 9/294 (3%)
Query: 19 EEQQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGIIL 78
EE YL++ E II+ G + DRTGTGT S F Q++FNL +FPLLTTKRVF +G++
Sbjct: 1 EEFLYLNMVEDIISNGNVKNDRTGTGTLSKFGC-QMKFNLRR-SFPLLTTKRVFWRGVVE 58
Query: 79 ELLWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEY 138
ELLWF++G T+ K L E+G+ IW+GN SREYLD +GLT+R EGDLGPVYGFQWRHFGA+Y
Sbjct: 59 ELLWFISGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKY 118
Query: 139 KTCDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVSFP 198
DY+GQG DQL ++I K+K NP DRRII+SAWNP D MALPPCH+F+QFYV
Sbjct: 119 TDMHADYTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYV--- 175
Query: 199 KGEGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHVYK 258
A+ LSC +YQRS DMGLGVPFNIASY+LLT M+A VCD+ PG+FIH LGDAHVYK
Sbjct: 176 ----AEGELSCQMYQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVLGDAHVYK 231
Query: 259 DHVDALRTQIAREPRAFPKLKIKRNVSDIDDFKYEDFEITDYNPHGKIQMKMSV 312
HV L+ Q+ P+ FP +KI ID F DF++T Y+PH KI+MKM+V
Sbjct: 232 THVRPLQEQLLNLPKPFPVMKINPEKKQIDSFVASDFDLTGYDPHKKIEMKMAV 285
>ECU01g1430 [F] KOG0673 Thymidylate synthase
Length = 294
Score = 337 bits (865), Expect = 1e-92
Identities = 167/294 (56%), Positives = 215/294 (72%), Gaps = 11/294 (3%)
Query: 20 EQQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGIILE 79
E QYLDL + I+ G R DRTGTGT S+F +RF+L ++TFPLLTT+RVF +G++ E
Sbjct: 9 EHQYLDLVKHILENGARRMDRTGTGTLSVFGAT-MRFSLEDNTFPLLTTRRVFYRGVVEE 67
Query: 80 LLWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYK 139
LL+F+ G TD K L ++GV+IWE NG++++L S+G+ DR EGDLGP+YGFQWRHFGA Y+
Sbjct: 68 LLFFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGI-DREEGDLGPIYGFQWRHFGARYE 126
Query: 140 TCDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVSFPK 199
T Y G+GVDQ+ I ++ NP RRI++SAWNP D MALPPCHV QF V+ K
Sbjct: 127 TSASSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGK 186
Query: 200 GEGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHVYKD 259
LSC +YQRS DMGLGVPFNIASY+LLT ++A + ++PGEF+H LGDAHVY D
Sbjct: 187 -------LSCAMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLD 239
Query: 260 HVDALRTQIAREPRAFPKLKI--KRNVSDIDDFKYEDFEITDYNPHGKIQMKMS 311
HVD+LR QI R PRAFPKL + K ++ + F+YEDFE+ Y+PH I+M MS
Sbjct: 240 HVDSLRQQIQRPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMS 293
>ECU01g0180 [F] KOG0673 Thymidylate synthase
Length = 294
Score = 337 bits (865), Expect = 1e-92
Identities = 167/294 (56%), Positives = 215/294 (72%), Gaps = 11/294 (3%)
Query: 20 EQQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGIILE 79
E QYLDL + I+ G R DRTGTGT S+F +RF+L ++TFPLLTT+RVF +G++ E
Sbjct: 9 EHQYLDLVKHILENGARRMDRTGTGTLSVFGAT-MRFSLEDNTFPLLTTRRVFYRGVVEE 67
Query: 80 LLWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYK 139
LL+F+ G TD K L ++GV+IWE NG++++L S+G+ DR EGDLGP+YGFQWRHFGA Y+
Sbjct: 68 LLFFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGI-DREEGDLGPIYGFQWRHFGARYE 126
Query: 140 TCDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVSFPK 199
T Y G+GVDQ+ I ++ NP RRI++SAWNP D MALPPCHV QF V+ K
Sbjct: 127 TSASSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGK 186
Query: 200 GEGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHVYKD 259
LSC +YQRS DMGLGVPFNIASY+LLT ++A + ++PGEF+H LGDAHVY D
Sbjct: 187 -------LSCAMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLD 239
Query: 260 HVDALRTQIAREPRAFPKLKI--KRNVSDIDDFKYEDFEITDYNPHGKIQMKMS 311
HVD+LR QI R PRAFPKL + K ++ + F+YEDFE+ Y+PH I+M MS
Sbjct: 240 HVDSLRQQIQRPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMS 293
>ECU08g0090 [F] KOG0673 Thymidylate synthase
Length = 294
Score = 337 bits (864), Expect = 1e-92
Identities = 166/294 (56%), Positives = 215/294 (72%), Gaps = 11/294 (3%)
Query: 20 EQQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGIILE 79
E QYLDL + I+ G R DRTGTGT S+F +RF+L ++TFPLLTT+RVF +G++ E
Sbjct: 9 EHQYLDLVKHILENGARRMDRTGTGTLSVFGAT-MRFSLEDNTFPLLTTRRVFYRGVVEE 67
Query: 80 LLWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYK 139
LL+F+ G TD K L ++GV+IWE NG++++L S+G+ DR EGDLGP+YGFQWRHFGA Y+
Sbjct: 68 LLFFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGI-DREEGDLGPIYGFQWRHFGARYE 126
Query: 140 TCDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVSFPK 199
T Y G+GVDQ+ I ++ NP RRI++SAWNP D MALPPCHV QF V+ K
Sbjct: 127 TSASSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGK 186
Query: 200 GEGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHVYKD 259
LSC +YQRS DMGLGVPFNIASY+LLT ++A + ++PGEF+H LGDAHVY D
Sbjct: 187 -------LSCAMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLD 239
Query: 260 HVDALRTQIAREPRAFPKLKI--KRNVSDIDDFKYEDFEITDYNPHGKIQMKMS 311
HVD+LR Q+ R PRAFPKL + K ++ + F+YEDFE+ Y+PH I+M MS
Sbjct: 240 HVDSLRQQVQRPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMS 293
>At2g21550_2 [F] KOG0673 Thymidylate synthase
Length = 260
Score = 206 bits (523), Expect = 5e-53
Identities = 116/280 (41%), Positives = 171/280 (60%), Gaps = 25/280 (8%)
Query: 19 EEQQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGIIL 78
EE YL+L + II+ G D T S F Q+RFNL TFPLLTTK++F G++
Sbjct: 2 EEFGYLNLVQNIISSG----DMNDNSTLSKFGC-QMRFNLRK-TFPLLTTKKIFWLGVVE 55
Query: 79 ELLWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRRE-GDLGPVYGFQWRHFGAE 137
E+L ++G + K E G IW+ + ++EYLDS G+ E GD ++G W+H
Sbjct: 56 EILQLISGSNNPK---ENGSHIWDTDEAKEYLDSFGVNATEEDGDNPFLHGLHWKH---- 108
Query: 138 YKTCDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVSF 197
CD + Q QL ++I+K+K NP+D+RI+L+A NP DF K+++ PCH F+QFYV
Sbjct: 109 ---CDARFVIQEFSQLSDVINKIKNNPHDQRIMLAACNPLDF-KLSVSPCHTFTQFYV-- 162
Query: 198 PKGEGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHVY 257
A +SC +YQ S + +G+PF+IA+Y+LLT +IA VCD+ G+FIH +G A++
Sbjct: 163 -----ANGEVSCQIYQSSTEASIGIPFSIATYSLLTCIIAHVCDLGAGDFIHVIGQAYIN 217
Query: 258 KDHVDALRTQIAREPRAFPKLKIKRNVSDIDDFKYEDFEI 297
K HV A++ Q+ P+ FP LKI +D+F+ D E+
Sbjct: 218 KAHVKAIQKQLQISPKPFPILKINPEKKKMDNFEASDLEL 257
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.140 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,957,773
Number of Sequences: 60738
Number of extensions: 969341
Number of successful extensions: 1760
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1720
Number of HSP's gapped (non-prelim): 12
length of query: 312
length of database: 30,389,216
effective HSP length: 106
effective length of query: 206
effective length of database: 23,950,988
effective search space: 4933903528
effective search space used: 4933903528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)