ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI2157 good C KOG2495 Energy production and conversion NADH-dehydrogenase (ubiquinone)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI2157 733200 735299 700
(700 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
At4g05020 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 334 2e-91
At2g20800 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 318 1e-86
At4g28220 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 296 9e-80
At4g21490 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 243 9e-64
YMR145c [C] KOG2495 NADH-dehydrogenase (ubiquinone) 235 2e-61
YDL085w [C] KOG2495 NADH-dehydrogenase (ubiquinone) 208 2e-53
SPBC947.15c [C] KOG2495 NADH-dehydrogenase (ubiquinone) 195 2e-49
YML120c [C] KOG2495 NADH-dehydrogenase (ubiquinone) 193 9e-49
SPAC3A11.07 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 187 5e-47
At1g07180 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 173 7e-43
At2g29990 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 170 8e-42
>At4g05020 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 583
Score = 334 bits (857), Expect = 2e-91
Identities = 209/556 (37%), Positives = 314/556 (55%), Gaps = 45/556 (8%)
Query: 157 ELTSYKPKLVVLGSGWASVGLLKNLNPGDYDVTVVSPQNYFLFTPLLPSAATGTLEVKSL 216
E + K K+V+LG+GWA LKNLN Y+V ++SP+NYF FTPLLPS GT+E +S+
Sbjct: 53 ETGTKKKKVVLLGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSV 112
Query: 217 MASIRKI--VNDVNGHYLEAYAEKVE-FDEKLIKVSQINTKTGAKDSFYLPYDKLVIAVG 273
+ IR I +V+ YLEA K++ +K+ S+ + K F + YD LVIA G
Sbjct: 113 VEPIRNIGRKKNVDTSYLEAECFKIDPASKKVYCRSKQGLSSNGKKEFSVDYDYLVIATG 172
Query: 274 STSNTHGVEGLQY-CSRLKTAEDAITLRKKIKTLLERACLPTTSDEERRRLLSFVVCGGG 332
+ SNT + G++ C LK EDA +RK + E+A LP SDEER+R+L FVV GGG
Sbjct: 173 AQSNTFNIPGVEENCHFLKEVEDAQRIRKTVIDSFEKASLPELSDEERKRILHFVVVGGG 232
Query: 333 PTGVEFAAEVFDLLNEDLPSMYPRILRQQLSVHVIQSRSNILNTYDEKISEYATQRFRKE 392
PTGVEFAAE+ D + EDL S+YPR + + + ++++ +IL +D++I+E+A ++F ++
Sbjct: 233 PTGVEFAAELHDFVTEDLVSLYPR-AKGSVRITLLEAADHILTMFDKRITEFAEEKFSRD 291
Query: 393 TIDVLTNSRVERILPDRVIFKQKDDKTGEVELKEIPFGICLWSTGVSQNPLTKQVVHSLA 452
IDV S V ++ K KT E+ IP+G+ +WSTG+ P+ K + +
Sbjct: 292 GIDVKLGSMVTKVNE-----KDISAKTKGGEVSSIPYGMIVWSTGIGTRPVIKDFMKQI- 345
Query: 453 HSQRNKRAIETDSYLRVIGAPTEDVYAIGDCSTV--RTDLADHTADYIRRFIVNRHLSLT 510
Q N+RA+ TD +LRV G T+++YA+GDC+T+ R + D +A + +
Sbjct: 346 -GQGNRRALATDEWLRVEG--TDNIYALGDCATINQRKVMEDVSAIFSK----------- 391
Query: 511 RSNEIITDEDIKHLSLSYNEIIDIAKQVARRHPQTREHL--------IHLEDDLPKYDVN 562
D+D K +L+ E + + R+PQ +L L + DV+
Sbjct: 392 ------ADKD-KSGTLTLKEFQEAMDDICVRYPQVELYLKSKRMRGIADLLKEAETDDVS 444
Query: 563 KSG-QLNFDQISTLLREVETKVTSLPATAQRAHQQGKYLGKKLTKVARSANKDSIQGIHE 621
K+ +L ++ + L +V+++V LPATAQ A QQG YL K ++ K I
Sbjct: 445 KNNIELKIEEFKSALSQVDSQVKFLPATAQVAAQQGAYLAKCFDRM-EECEKSPEGPIRM 503
Query: 622 KGIDEKVYRPFRYVHLGSLAYI-GNSAVFDLPGYSFVGGLIAMYLWRSIYFAQTVSWRTR 680
+G +RPFRY HLG A + G LPG G + +LW S+Y ++ VSWRTR
Sbjct: 504 RGEGRHRFRPFRYRHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTR 563
Query: 681 VLLFMDWLKRGMFGRD 696
VL+ DW++R +FGRD
Sbjct: 564 VLVVSDWMRRFIFGRD 579
>At2g20800 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 582
Score = 318 bits (816), Expect = 1e-86
Identities = 190/542 (35%), Positives = 308/542 (56%), Gaps = 33/542 (6%)
Query: 162 KPKLVVLGSGWASVGLLKNLNPGDYDVTVVSPQNYFLFTPLLPSAATGTLEVKSLMASIR 221
K K+VVLGSGW+ L LN +YDV VVSP+N+FLFTPLLPS GT+E +S++ IR
Sbjct: 63 KKKVVVLGSGWSGYSFLSYLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVEARSIVEPIR 122
Query: 222 KIVNDVNGHYLEAYAEKVEFDEKLIKV-SQINTKTGAKDSFYLPYDKLVIAVGSTSNTHG 280
++ Y EA K++ K I S+ + F + YD L++AVG+ NT
Sbjct: 123 GLMRKKGFEYKEAECVKIDASNKKIHCRSKEGSSLKGTTEFDMDYDILILAVGAKPNTFN 182
Query: 281 VEGL-QYCSRLKTAEDAITLRKKIKTLLERACLPTTSDEERRRLLSFVVCGGGPTGVEFA 339
G+ ++ LK AEDA+ +R + ERA LP ++EER+++L FVV GGGPTGVEF+
Sbjct: 183 TPGVEEHAYFLKEAEDALNIRHSVIDCFERASLPNLTEEERKKILHFVVVGGGPTGVEFS 242
Query: 340 AEVFDLLNEDLPSMYPRILRQQLSVHVIQSRSNILNTYDEKISEYATQRFRKETIDVLTN 399
AE+ D L +D+ +YP++ ++ + ++++ +ILN +D++I+ +A ++F+++ ID+ T
Sbjct: 243 AELHDFLVQDVAKIYPKV-QEFTKITLLEAGDHILNMFDKRITAFAEEKFQRDGIDLKTG 301
Query: 400 SRVERILPDRVIFKQKDDKTGEVELKEIPFGICLWSTGVSQNPLTKQVVHSLAHSQRNKR 459
S V + D + K+++ TG++ + P+G+ +WSTG+ P+ K + + QR R
Sbjct: 302 SMVVGVTADEISTKERE--TGKIVSE--PYGMVVWSTGIGSRPVIKDFMQQIGQGQR--R 355
Query: 460 AIETDSYLRVIGAPTEDVYAIGDCSTVRTDLADHTADYIRRFIVNRHLSLTRSNEIITDE 519
+ TD +LRV G + VYA+GD +T+ RR + + ++++ T
Sbjct: 356 VLATDEWLRVEGC--DGVYALGDTATINQ----------RRVMEDIAAIFNKADKGNTG- 402
Query: 520 DIKHLSLSYNEIIDIAKQVARRHPQTREHL----IHLEDDLPKYDVNKSGQLNFDQISTL 575
+L + + K + +R+PQ +L + +L K + Q+N ++
Sbjct: 403 -----TLKKKDFNSVVKDICQRYPQVELYLKKNKLKNIANLLKSANGEDTQVNIEKFKQA 457
Query: 576 LREVETKVTSLPATAQRAHQQGKYLGKKLTKVARSANKDSIQGIHEKGIDEKVYRPFRYV 635
L EV++++ +LPATAQ A QQGKYL K K+ + K + +G ++PFRY
Sbjct: 458 LSEVDSQMKNLPATAQVASQQGKYLAKCFNKMEKCEKKPE-GPLRFRGEGRHRFQPFRYR 516
Query: 636 HLGSLAYI-GNSAVFDLPGYSFVGGLIAMYLWRSIYFAQTVSWRTRVLLFMDWLKRGMFG 694
H GS A + G +LPG G + +LW S+Y ++ VSWRTR+L+ DW +R +FG
Sbjct: 517 HFGSFAPLGGEQTAAELPGDWVSIGHSSQWLWYSVYASKLVSWRTRMLVISDWTRRFVFG 576
Query: 695 RD 696
RD
Sbjct: 577 RD 578
>At4g28220 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 559
Score = 296 bits (757), Expect = 9e-80
Identities = 192/549 (34%), Positives = 293/549 (52%), Gaps = 43/549 (7%)
Query: 149 DAYDSEMKELTSYKPKLVVLGSGWASVGLLKNLNPGDYDVTVVSPQNYFLFTPLLPSAAT 208
DA + K+ K K+VVLG+GWA + LK+L+ YDV VVSPQNYF FTPLLPS
Sbjct: 36 DANEEANKKEEHKKKKVVVLGTGWAGISFLKDLDITSYDVQVVSPQNYFAFTPLLPSVTC 95
Query: 209 GTLEVKSLMASIRKIVNDVNG--HYLEAYAEKVEFDEKLIKVSQI-NTKTGAKDSFYLPY 265
GT+E +S++ S+R I NG EA K++ + + + A F L Y
Sbjct: 96 GTVEARSIVESVRNITKKKNGEIELWEADCFKIDHVNQKVHCRPVFKDDPEASQEFSLGY 155
Query: 266 DKLVIAVGSTSNTHGVEG-LQYCSRLKTAEDAITLRKKIKTLLERACLPTTSDEERRRLL 324
D L++AVG+ NT G G L+ C LK EDA +R+ + E+A LP ++E+RRR L
Sbjct: 156 DYLIVAVGAQVNTFGTPGVLENCHFLKEVEDAQRIRRGVIDCFEKAILPGLTEEQRRRKL 215
Query: 325 SFVVCGGGPTGVEFAAEVFDLLNEDLPSMYPRILRQQLSVHVIQSRSNILNTYDEKISEY 384
FV+ GGGPTGVEFAAE+ D + ED+ +YP + ++ + + +IQS +ILNT+DE+IS +
Sbjct: 216 HFVIVGGGPTGVEFAAELHDFIIEDITKIYPSV-KELVKITLIQSGDHILNTFDERISSF 274
Query: 385 ATQRFRKETIDVLTNSRVERILPDRVIFKQKDDKTGEVELKEIPFGICLWSTGVSQNPLT 444
A Q+F ++ IDV T RV + + K K EL IP G+ LWSTGV P+
Sbjct: 275 AEQKFTRDGIDVQTGMRVMSVTDKDITVKVKSSG----ELVSIPHGLILWSTGVGTRPVI 330
Query: 445 KQVVHSLAHSQRNKRAIETDSYLRVIGAPTEDVYAIGDCSTVRTDLADHTADYIRRFIVN 504
+ + Q +RA+ T+ +L+V G E+VYA+GDC+++ +R I+
Sbjct: 331 SDFMEQV--GQGGRRAVATNEWLQVTGC--ENVYAVGDCASI-----------AQRKILG 375
Query: 505 RHLSLTRSNEIITDEDIKHLSLSYNEIIDIAKQVARRHPQTR-----EHLIHLEDDLPKY 559
++ ++ D D +L+ E+ + + R+PQ +H+ H+ D L
Sbjct: 376 DIANIFKA----ADAD-NSGTLTMEELEGVVDDIIVRYPQVELYLKSKHMRHINDLLADS 430
Query: 560 DVNKSGQLNFDQISTLLREVETKVTSLPATAQRAHQQGKYLGK------KLTKVARSANK 613
+ N +++ + L E ++++ +LPATAQ A QQG YL K + ++ +
Sbjct: 431 EGNARKEVDIEAFKLALSEADSQMKTLPATAQVAAQQGAYLAKCFNRMEQCKELPEGPKR 490
Query: 614 DSIQGIHE--KGIDEKVYRPFRYVHLGSLAYI-GNSAVFDLPGYSFVGGLIAMYLWRSIY 670
G H+ DE +RY H G A + G+ A +LPG G A +LW S+Y
Sbjct: 491 FRTGGHHQFRPFQDESSSLDYRYKHFGQFAPLGGDQAAAELPGDWVSAGKSAQWLWYSVY 550
Query: 671 FAQTVSWRT 679
++ + T
Sbjct: 551 ASKCTEFET 559
>At4g21490 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 478
Score = 243 bits (619), Expect = 9e-64
Identities = 133/350 (38%), Positives = 209/350 (59%), Gaps = 12/350 (3%)
Query: 141 LPILRETLDAYDSEMKELTSYKPKLVVLGSGWASVGLLKNLNPGDYDVTVVSPQNYFLFT 200
L + E +Y + E + K K+V+LG+GWA LK LN Y+V V+SP+NYF FT
Sbjct: 22 LIVYSEANPSYSNNGVETKTRKRKVVLLGTGWAGASFLKTLNNSSYEVQVISPRNYFAFT 81
Query: 201 PLLPSAATGTLEVKSLMASIRKIV--NDVNGHYLEAYAEKVEFDEKLIKV-SQINTKTGA 257
PLLPS GT+E +S++ IR I +V +LEA K++ K + S+ +
Sbjct: 82 PLLPSVTCGTVEARSVVEPIRNIARKQNVEMSFLEAECFKIDPGSKKVYCRSKQGVNSKG 141
Query: 258 KDSFYLPYDKLVIAVGSTSNTHGVEGL-QYCSRLKTAEDAITLRKKIKTLLERACLPTTS 316
K F + YD LVIA G+ SNT + G+ + C LK EDA +R + E+A LP +
Sbjct: 142 KKEFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRSTVIDSFEKASLPGLN 201
Query: 317 DEERRRLLSFVVCGGGPTGVEFAAEVFDLLNEDLPSMYPRILRQQLSVHVIQSRSNILNT 376
++ER+R+L FVV GGGPTGVEFA+E+ D +NEDL +YP+ + + + ++++ +IL
Sbjct: 202 EQERKRMLHFVVVGGGPTGVEFASELHDFVNEDLVKLYPK-AKNLVQITLLEAADHILTM 260
Query: 377 YDEKISEYATQRFRKETIDVLTNSRVERILPDRVIFKQKDDKTGEVELKEIPFGICLWST 436
+D++I+E+A ++F ++ IDV S V ++ K+ KT E+ IP+G+ +WST
Sbjct: 261 FDKRITEFAEEKFTRDGIDVKLGSMVVKVND-----KEISAKTKAGEVSTIPYGMIVWST 315
Query: 437 GVSQNPLTKQVVHSLAHSQRNKRAIETDSYLRVIGAPTEDVYAIGDCSTV 486
G+ P+ K + + +RA+ TD +LRV G +++YA+GDC+T+
Sbjct: 316 GIGTRPVIKDFMKQIGQVSSQRRALATDEWLRVEGC--DNIYALGDCATI 363
Score = 74.7 bits (182), Expect = 4e-13
Identities = 43/105 (40%), Positives = 58/105 (54%), Gaps = 2/105 (1%)
Query: 593 AHQQGKYLGKKLTKVARSANKDSIQGIHEKGIDEKVYRPFRYVHLGSLAYIGNS-AVFDL 651
A QQG YL K ++ K+ I +G +RPFRY HLG A +G L
Sbjct: 371 AAQQGTYLAKCFDRM-EVCEKNPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGEQTAAQL 429
Query: 652 PGYSFVGGLIAMYLWRSIYFAQTVSWRTRVLLFMDWLKRGMFGRD 696
PG G + +LW S+Y ++ VSWRTRVL+ DW++R +FGRD
Sbjct: 430 PGDWVSIGHSSQWLWYSVYASKQVSWRTRVLVVSDWMRRFIFGRD 474
>YMR145c [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 560
Score = 235 bits (599), Expect = 2e-61
Identities = 138/331 (41%), Positives = 209/331 (62%), Gaps = 19/331 (5%)
Query: 160 SYKPKLVVLGSGWASVGLLKNLNPGDYDVTVVSPQNYFLFTPLLPSAATGTLEVKSLMAS 219
S + LV+LGSGW SV LLKNL+ Y+V VVSP+NYFLFTPLLPS GT+E+KS++
Sbjct: 110 SKRKTLVILGSGWGSVSLLKNLDTTLYNVVVVSPRNYFLFTPLLPSTPVGTIELKSIVEP 169
Query: 220 IRKIVNDVNG--HYLEAYAEKVEFDEKLIKVSQINTKTGAKDSFY---LPYDKLVIAVGS 274
+R I +G HY EA A V+ + K IKV K+ AK++ Y L YD LV+ VG+
Sbjct: 170 VRTIARRSHGEVHYYEAEAYDVDPENKTIKV-----KSSAKNNDYDLDLKYDYLVVGVGA 224
Query: 275 TSNTHGVEGL-QYCSRLKTAEDAITLRKKIKTLLERACLPTTSDEERRRLLSFVVCGGGP 333
NT G G+ +Y S LK DA +R KI + +E+A + D ER RLLSFVV GGGP
Sbjct: 225 QPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAASLSPKDPERARLLSFVVVGGGP 284
Query: 334 TGVEFAAEVFDLLNEDLPSMYPRILRQQLSVHVIQSRSNILNTYDEKISEYATQRFRKET 393
TGVEFAAE+ D +++DL P L +++ V ++++ NILN +D+ + +YA F++E
Sbjct: 285 TGVEFAAELRDYVDQDLRKWMPE-LSKEIKVTLVEALPNILNMFDKYLVDYAQDLFKEEK 343
Query: 394 IDVLTNSRVERILPDRVIFKQKDDKTGEVELKEIPFGICLWSTGVSQNPLTKQVVHSLAH 453
ID+ + V+++ + KTG+ +++ IP+G+ +W+TG + ++K ++ L
Sbjct: 344 IDLRLKTMVKKVDATTI-----TAKTGDGDIENIPYGVLVWATGNAPREVSKNLMTKL-E 397
Query: 454 SQRNKRAIETDSYLRVIGAPTEDVYAIGDCS 484
Q ++R + D+ L+++GA ++AIGDC+
Sbjct: 398 EQDSRRGLLIDNKLQLLGA-KGSIFAIGDCT 427
Score = 60.5 bits (145), Expect = 9e-09
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 21/126 (16%)
Query: 589 TAQRAHQQGKYLGKKLTKVARSANKDSIQGIHEKGIDEKVYR-------------PFRYV 635
TAQ AHQ+G+YL + K A ++ + + H K D +V R F+Y
Sbjct: 435 TAQVAHQEGEYLAQYFKK-AYKIDQLNWKMTHAKD-DSEVARLKNQIVKTQSQIEDFKYN 492
Query: 636 HLGSLAYIGNS-AVFDLP----GYSFVGGLIAMYLWRSIYFAQTVSWRTRVLLFMDWLKR 690
H G+LAYIG+ A+ DL Y G ++ W+S Y A +S+R RVL+ MDW K
Sbjct: 493 HKGALAYIGSDKAIADLAVGEAKYRLAGSFTFLF-WKSAYLAMCLSFRNRVLVAMDWAKV 551
Query: 691 GMFGRD 696
GRD
Sbjct: 552 YFLGRD 557
>YDL085w [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 545
Score = 208 bits (530), Expect = 2e-53
Identities = 123/329 (37%), Positives = 197/329 (59%), Gaps = 19/329 (5%)
Query: 162 KPKLVVLGSGWASVGLLKNLNPGDYDVTVVSPQNYFLFTPLLPSAATGTLEVKSLMASIR 221
K +LV+LG+GW ++ LLK L+ Y+VTVVSP+++FLFTPLLPS GT+E+KS++ +R
Sbjct: 97 KKELVILGTGWGAISLLKKLDTSLYNVTVVSPRSFFLFTPLLPSTPVGTIEMKSIVEPVR 156
Query: 222 KIVNDVNG--HYLEAYAEKVEFDEKLIKVSQINTKTGAKDSFY---LPYDKLVIAVGSTS 276
I G HY+EA A V+ K + V + ++D ++ L YD LV++VG+ +
Sbjct: 157 SIARRTPGEVHYIEAEALDVDPKAKKVMVQSV-----SEDEYFVSSLSYDYLVVSVGAKT 211
Query: 277 NTHGVEGLQ-YCSRLKTAEDAITLRKKIKTLLERACLPTTSDEERRRLLSFVVCGGGPTG 335
T + G+ + LK EDA +R K+ +E+A +D ER+RLL+FVV GGGPTG
Sbjct: 212 TTFNIPGVYGNANFLKEIEDAQNIRMKLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTG 271
Query: 336 VEFAAEVFDLLNEDLPSMYPRILRQQLSVHVIQSRSNILNTYDEKISEYATQRFRKETID 395
VEFAAE+ D +N+DL P L +++ V +I++ NILN +D+ + +YA F ++ ID
Sbjct: 272 VEFAAELQDYINQDLRKWMPD-LSKEMKVILIEALPNILNMFDKTLIKYAEDLFARDEID 330
Query: 396 VLTNSRVERILPDRVIFKQKDDKTGEVELKEIPFGICLWSTGVSQNPLTKQVVHSLAHSQ 455
+ N+ V+ + P + Q ++E +G+ +W+TG +K ++ S Q
Sbjct: 331 LQVNTAVKVVEPTYIRTLQNGQTNTDIE-----YGMLVWATGNEPIDFSKTLM-SRIPEQ 384
Query: 456 RNKRAIETDSYLRVIGAPTEDVYAIGDCS 484
N+R + + L ++G+ +YAIGDC+
Sbjct: 385 TNRRGLLINDKLELLGS-ENSIYAIGDCT 412
Score = 70.5 bits (171), Expect = 8e-12
Identities = 63/206 (30%), Positives = 93/206 (44%), Gaps = 42/206 (20%)
Query: 517 TDEDIKHLSLSY---NEIIDIAKQVARRHPQTREHLIHLEDDLPKYDVNKSGQLNFDQIS 573
T+ DI++ L + NE ID +K + R P+ N+ G L D++
Sbjct: 353 TNTDIEYGMLVWATGNEPIDFSKTLMSRIPE---------------QTNRRGLLINDKLE 397
Query: 574 TLLREVE-------TKVTSLPATAQRAHQQGKYLGKKLTK----------VARSANKDSI 616
L E T T TAQ AHQ+G+YL K L K + S ++ +
Sbjct: 398 LLGSENSIYAIGDCTAHTGFFPTAQVAHQEGEYLAKILDKKLQIEQLEWDMLNSTDETEV 457
Query: 617 QGIH-EKGIDEKVYRPFRYVHLGSLAYIGN-SAVFDL----PGYSFVGGLIAMYLWRSIY 670
+ E + + F Y H+G+LAYIG+ +A+ DL Y + G+ A W+S Y
Sbjct: 458 SRLQKEVNLRKSKLDKFNYKHMGALAYIGSETAIADLHMGDSSYQ-LKGMFAFLFWKSAY 516
Query: 671 FAQTVSWRTRVLLFMDWLKRGMFGRD 696
A +S R R+L+ MDW K GRD
Sbjct: 517 LAMCLSIRNRILIAMDWTKVYFLGRD 542
>SPBC947.15c [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 551
Score = 195 bits (495), Expect = 2e-49
Identities = 110/329 (33%), Positives = 192/329 (57%), Gaps = 13/329 (3%)
Query: 162 KPKLVVLGSGWASVGLLKNLNPGDYDVTVVSPQNYFLFTPLLPSAATGTLEVKS----LM 217
K +VVLGSGW +V +KNL+P Y++T+VSP+++FLFTP+LPS GTL + S ++
Sbjct: 90 KKNIVVLGSGWGAVAAIKNLDPSLYNITLVSPRDHFLFTPMLPSCTVGTLRLPSITEPIV 149
Query: 218 ASIRKIVNDVNGHYLEAYAEKVEFDEKLIKVSQINTKTGAKDSFYLPYDKLVIAVGSTSN 277
A + ++ N H E A ++ K + + K++ +PYD LV A+G+ +
Sbjct: 150 ALFKGKIDPSNIHQAECTA--IDTSAKKVTIRGTTEANEGKEA-VIPYDTLVFAIGAGNQ 206
Query: 278 THGVEGLQ-YCSRLKTAEDAITLRKKIKTLLERACL-PTTSDEERRRLLSFVVCGGGPTG 335
T G++G++ + LK A DA + +I +LE+ S EER RLL V GGGPTG
Sbjct: 207 TFGIQGVRDHGCFLKEAGDAKKVFNRIFEILEQVRFNKDLSPEERARLLHITVVGGGPTG 266
Query: 336 VEFAAEVFDLLNEDLPSMYPRILRQQLSVHVIQSRSNILNTYDEKISEYATQRFRKETID 395
+EFAAE+ D ++ D+ M+P L++ + V +I++ +L + + + Y F+ I
Sbjct: 267 MEFAAEMQDFIDNDVKDMFPE-LQKDIHVTLIEAAPGVLPMFTKSLITYTENLFKNLNIK 325
Query: 396 VLTNSRVERILPDRVIFKQKDDKTGEVELKEIPFGICLWSTGVSQNPLTKQVVHSLAHSQ 455
++T + V+ + ++ + QK + G ++EIP+G+ +W+ G++ PLT+ ++ S+
Sbjct: 326 IMTKTVVKDV-NEKNLIVQKTNPDGSKAMQEIPYGMLVWAAGITARPLTRTLMSSIPEQS 384
Query: 456 RNKRAIETDSYLRVIGAPTEDVYAIGDCS 484
++ + D + RV G P ++YA+GDC+
Sbjct: 385 GARKGLIVDEFFRVKGVP--EMYAVGDCA 411
Score = 63.5 bits (153), Expect = 1e-09
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 22/134 (16%)
Query: 584 TSLPATAQRAHQQGKYLGKKLTKVARS-ANKDSIQGIHEK-----------GIDEKVYR- 630
+ LPATAQ A+QQG +L K L + A + IQ + ++ G+ ++V +
Sbjct: 413 SGLPATAQVANQQGAWLAKNLNVEGKKFALHERIQALEKQLGEKEAPSQVAGLKQQVEQL 472
Query: 631 ---PFRYVHLGSLAYIGNS-AVFDLPGYSF-----VGGLIAMYLWRSIYFAQTVSWRTRV 681
PF+Y H G+LAY+G+ A+ DL + G++ WR Y + +S R++
Sbjct: 473 KLEPFKYHHQGALAYVGDEKAIADLKLPFMKKMLPLQGIVGHTFWRLAYLNELISARSQF 532
Query: 682 LLFMDWLKRGMFGR 695
++ +DWLK +FGR
Sbjct: 533 MVLIDWLKTRLFGR 546
>YML120c [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 513
Score = 193 bits (490), Expect = 9e-49
Identities = 111/341 (32%), Positives = 188/341 (54%), Gaps = 26/341 (7%)
Query: 160 SYKPKLVVLGSGWASVGLLKNLNPGDYDVTVVSPQNYFLFTPLLPSAATGTLEVKSLMAS 219
S KP +++LGSGW ++ LK+++ Y+V+++SP++YFLFTPLLPSA GT++ KS++
Sbjct: 51 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEP 110
Query: 220 IRKIVNDVNGH--YLEAYAEKVEFDEKLIKVSQINTKTGAKDSFYLP------------- 264
I G+ Y EA A + D + + ++ A Y P
Sbjct: 111 IVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLS----AVSQLYQPENHLGLHQAEPAE 166
Query: 265 --YDKLVIAVGSTSNTHGVEGL-QYCSRLKTAEDAITLRKKIKTLLERACLPTTSDEERR 321
YD L+ AVG+ NT G+ G+ Y LK +++ +R+ LE+A L D ERR
Sbjct: 167 IKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERR 226
Query: 322 RLLSFVVCGGGPTGVEFAAEVFDLLNEDLPSMYPRILRQQLSVHVIQSRSNILNTYDEKI 381
RLLS VV GGGPTGVE A E+ D +++DL P L +++ +H++++ +LN +++K+
Sbjct: 227 RLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLP-ALAEEVQIHLVEALPIVLNMFEKKL 285
Query: 382 SEYATQRFRKETIDVLTNSRVERILPDRVIFKQKDDKTGEVELKEIPFGICLWSTGVSQN 441
S YA +I V + V ++ +++ K K + G++ + IP+G +W+TG
Sbjct: 286 SSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHE-DGKITEETIPYGTLIWATGNKAR 344
Query: 442 PLTKQVVHSLAHSQRNKRAIETDSYLRVIGAPTEDVYAIGD 482
P+ + + +KR + + +L+V G + +++AIGD
Sbjct: 345 PVITDLFKKIPEQNSSKRGLAVNDFLQVKG--SNNIFAIGD 383
Score = 79.7 bits (195), Expect = 1e-14
Identities = 48/124 (38%), Positives = 69/124 (54%), Gaps = 17/124 (13%)
Query: 586 LPATAQRAHQQGKYLGKKLTKVAR--------SANKDSIQGIHEKGIDEKVYRPFRYVHL 637
LP TAQ AHQ+ +YL K K+A+ S+ KD I + E E ++PF+Y L
Sbjct: 389 LPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFE----ENNFKPFKYNDL 444
Query: 638 GSLAYIGNS---AVFDLPGYSFV--GGLIAMYLWRSIYFAQTVSWRTRVLLFMDWLKRGM 692
G+LAY+G+ A +F GGL+ YLWR +Y + +S R+R+ +F DW+K
Sbjct: 445 GALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAF 504
Query: 693 FGRD 696
F RD
Sbjct: 505 FKRD 508
>SPAC3A11.07 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 551
Score = 187 bits (475), Expect = 5e-47
Identities = 109/326 (33%), Positives = 187/326 (56%), Gaps = 9/326 (2%)
Query: 162 KPKLVVLGSGWASVGLLKNLNPGDYDVTVVSPQNYFLFTPLLPSAATGTLEVKSLMASIR 221
K LVVLG+GW + +L+ ++ ++V VVSP+NYFLFT LLPS ATG++ +S++ IR
Sbjct: 91 KKTLVVLGAGWGATSILRTIDTSLFNVIVVSPRNYFLFTSLLPSTATGSVHTRSIVQPIR 150
Query: 222 KIVNDVNGH--YLEAYAEKVEFDEKLIKVSQINTKTGAKDSFYLPYDKLVIAVGSTSNTH 279
++ + + + EA V+ D+K+I + + T G + YD LV + G+ + T
Sbjct: 151 YMLRHKSCYVKFYEAECTDVDADKKVIHIKK-TTTDGVDLEQEIKYDYLVCSHGAETQTF 209
Query: 280 GVEGL-QYCSRLKTAEDAITLRKKIKTLLERACLPTTSDEERRRLLSFVVCGGGPTGVEF 338
+ G+ +Y LK DA +R +I LE+A E RRR + VV GGGPTG+EF
Sbjct: 210 NIPGIAEYGCFLKEIWDAQKIRARILHCLEQAQFKDLPAETRRRYVHTVVVGGGPTGMEF 269
Query: 339 AAEVFDLLNEDLPSMYPRILRQQLSVHVIQSRSNILNTYDEKISEYATQRFRKETIDVLT 398
A E+ D + +DL S YP L +V ++++ ++L + K+ +Y F I + T
Sbjct: 270 AGEMADFIEDDLKSWYPE-LADDFAVTLVEALPSVLPMFSAKLRDYTQSLFDSSHIKIRT 328
Query: 399 NSRVERILPDRVIFKQKDDKTGEVELKEIPFGICLWSTGVSQNPLTKQVVHSLAHSQRNK 458
N+ ++++ + + + K + G + + IP+G+ +W+ G PLTK+++ + Q N+
Sbjct: 329 NTALKKVTAENIHVEVK-NPDGSKQEEVIPYGLLVWAGGNRARPLTKKLMEG-SEEQNNR 386
Query: 459 RAIETDSYLRVIGAPTEDVYAIGDCS 484
R + D YL++ G +D++A+GDC+
Sbjct: 387 RGLVVDEYLKLKG--YKDIFALGDCT 410
Score = 78.6 bits (192), Expect = 3e-14
Identities = 50/139 (35%), Positives = 70/139 (49%), Gaps = 23/139 (16%)
Query: 584 TSLPATAQRAHQQGKYLGKKLTK--------------VARSANKDS---IQGIHEKGIDE 626
T+ TAQ A QQG YLG+ K +A DS I +EK
Sbjct: 412 TAYAPTAQVASQQGAYLGQLFNKLGSLNFEKPSEDRHIALGDEMDSSTLISLANEKHAST 471
Query: 627 KVYRPFRYVHLGSLAYIGNS---AVFDLPGYS---FVGGLIAMYLWRSIYFAQTVSWRTR 680
KV+ PF+Y H GSLAY+G+ A ++P + G +A Y WRS+Y ++ S R R
Sbjct: 472 KVFLPFKYSHQGSLAYVGHEKAIADIEVPWFGKQLHASGALAFYFWRSVYLSELYSLRNR 531
Query: 681 VLLFMDWLKRGMFGRDILS 699
+ +DW++ +FGRDI S
Sbjct: 532 TNVTLDWIRVKLFGRDISS 550
>At1g07180 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 510
Score = 173 bits (439), Expect = 7e-43
Identities = 114/341 (33%), Positives = 184/341 (53%), Gaps = 25/341 (7%)
Query: 151 YDSEMKELTSYKPKLVVLGSGWASVGLLKNLNPGDYDVTVVSPQNYFLFTPLLPSAATGT 210
YD KP+++VLGSGWA +LK ++ YDV VSP+N+ +FTPLL S GT
Sbjct: 62 YDGLAPTKEGEKPRVLVLGSGWAGCRVLKGIDTSIYDVVCVSPRNHMVFTPLLASTCVGT 121
Query: 211 LEVKSLMASIRK----IVNDVNGHYLEAYAEKVEFDEKLIKVSQI--NTKTGAKDSFYLP 264
LE +S+ I + I + +Y A K++ D + + + T F +
Sbjct: 122 LEFRSVAEPISRIQPAISREPGSYYFLANCSKLDADNHEVHCETVTEGSSTLKPWKFKIA 181
Query: 265 YDKLVIAVGSTSNTHGVEG-LQYCSRLKTAEDAITLRKKIKTLLERACLPTTSDEERRRL 323
YDKLV+A G+ ++T G+ G L+ L+ A +R+K+ L + +P ++E++RL
Sbjct: 182 YDKLVLACGAEASTFGINGVLENAIFLREVHHAQEIRRKLLLNLMLSEVPGIGEDEKKRL 241
Query: 324 LSFVVCGGGPTGVEFAAEVFDLLNEDLPSMYPRILRQQLSVHVIQSRSNILNTYDEKISE 383
L VV GGGPTGVEF+ E+ D + +D+ Y + + + V +I++R +IL+++D+++
Sbjct: 242 LHCVVVGGGPTGVEFSGELSDFIMKDVRQRYSHV-KDDIRVTLIEAR-DILSSFDDRLRH 299
Query: 384 YATQRFRKETIDVLTNSRVERILPDRVIFKQKDDKTGEVELKEIPFGICLWSTGVSQNPL 443
YA ++ K + L V+ + P ++I DD T E+P+G +WSTGV +
Sbjct: 300 YAIKQLNKSGVK-LVRGIVKEVKPQKLIL---DDGT------EVPYGPLVWSTGVGPS-- 347
Query: 444 TKQVVHSLAHSQRNKRAIETDSYLRVIGAPTEDVYAIGDCS 484
V SL + I D ++RV +DV+AIGDCS
Sbjct: 348 --SFVRSLDFPKDPGGRIGIDEWMRV--PSVQDVFAIGDCS 384
Score = 70.9 bits (172), Expect = 6e-12
Identities = 44/124 (35%), Positives = 66/124 (52%), Gaps = 13/124 (10%)
Query: 581 TKVTSLPATAQRAHQQGKYLGKKLTKVARSANKDSIQGIHEKGIDEKVYRPFRYVHLGSL 640
T ++LPA AQ A ++GKYL + ++ G + ++ PF Y HLGS+
Sbjct: 390 TGKSTLPALAQVAEREGKYLANLFNVMGKAGG-----GRANSAKEMELGEPFVYKHLGSM 444
Query: 641 AYIGN-SAVFDL------PGYSFVGGLIAMYLWRSIYFAQTVSWRTRVLLFMDWLKRGMF 693
A IG A+ DL G S + G ++ ++WRS Y + VSWR R + ++WL +F
Sbjct: 445 ATIGRYKALVDLRESKEGKGIS-MAGFLSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVF 503
Query: 694 GRDI 697
GRDI
Sbjct: 504 GRDI 507
>At2g29990 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 508
Score = 170 bits (430), Expect = 8e-42
Identities = 113/330 (34%), Positives = 179/330 (54%), Gaps = 25/330 (7%)
Query: 162 KPKLVVLGSGWASVGLLKNLNPGDYDVTVVSPQNYFLFTPLLPSAATGTLEVKSLMASIR 221
KP++VVLGSGWA L+K ++ YDV VSP+N+ +FTPLL S GTLE +S+ I
Sbjct: 71 KPRVVVLGSGWAGCRLMKGIDTNLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIS 130
Query: 222 K----IVNDVNGHYLEAYAEKVEFDEKLIKVSQI--NTKTGAKDSFYLPYDKLVIAVGST 275
+ I + + A +++ D + + T F + YDKLVIA G+
Sbjct: 131 RIQPAISREPGSFFFLANCSRLDADAHEVHCETLTDGLNTLKPWKFKIAYDKLVIASGAE 190
Query: 276 SNTHGVEG-LQYCSRLKTAEDAITLRKKIKTLLERACLPTTSDEERRRLLSFVVCGGGPT 334
++T G+ G ++ L+ A +R+K+ L + P S EE+RRLL VV GGGPT
Sbjct: 191 ASTFGIHGVMENAIFLREVHHAQEIRRKLLLNLMLSDTPGISKEEKRRLLHCVVVGGGPT 250
Query: 335 GVEFAAEVFDLLNEDLPSMYPRILRQQLSVHVIQSRSNILNTYDEKISEYATQRFRKETI 394
GVEF+ E+ D + +D+ Y + + + V +I++R +IL+++D+++ YA ++ K +
Sbjct: 251 GVEFSGELSDFIMKDVRQRYAHV-KDDIHVTLIEAR-DILSSFDDRLRRYAIKQLNKSGV 308
Query: 395 DVLTNSRVERILPDRVIFKQKDDKTGEVELKEIPFGICLWSTGVSQNPLTKQVVHSLAHS 454
V+ + ++I DD T E+P+G+ +WSTGV +P V SL
Sbjct: 309 R-FVRGIVKDVQSQKLIL---DDGT------EVPYGLLVWSTGVGPSPF----VRSLGLP 354
Query: 455 QRNKRAIETDSYLRVIGAPTEDVYAIGDCS 484
+ I D ++RV +DV+AIGDCS
Sbjct: 355 KDPTGRIGIDEWMRV--PSVQDVFAIGDCS 382
Score = 68.6 bits (166), Expect = 3e-11
Identities = 45/122 (36%), Positives = 65/122 (52%), Gaps = 17/122 (13%)
Query: 585 SLPATAQRAHQQGKYLGKKLTKVARS--ANKDSIQGIHEKGIDEKVYRPFRYVHLGSLAY 642
+LPA AQ A ++GKYL L + + +S + I E G+ PF Y HLGS+A
Sbjct: 392 TLPALAQVAEREGKYLANLLNAIGKGNGGRANSAKEI-ELGV------PFVYKHLGSMAT 444
Query: 643 IGN-SAVFDL------PGYSFVGGLIAMYLWRSIYFAQTVSWRTRVLLFMDWLKRGMFGR 695
IG A+ DL G S G ++ ++WRS Y + +SWR R + ++W +FGR
Sbjct: 445 IGRYKALVDLRESKDAKGISMTG-FVSWFIWRSAYLTRVISWRNRFYVAINWFTTFVFGR 503
Query: 696 DI 697
DI
Sbjct: 504 DI 505
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.136 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,414,046
Number of Sequences: 60738
Number of extensions: 1715248
Number of successful extensions: 4730
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4638
Number of HSP's gapped (non-prelim): 19
length of query: 700
length of database: 30,389,216
effective HSP length: 113
effective length of query: 587
effective length of database: 23,525,822
effective search space: 13809657514
effective search space used: 13809657514
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)