ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI2289 check: MH R KOG0266 General function prediction only WD40 repeat-containing protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI2289 776960 778228 423
(423 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL004c [R] KOG0266 WD40 repeat-containing protein 191 1e-48
Hs13376751 [R] KOG0266 WD40 repeat-containing protein 101 2e-21
CE28982 [R] KOG0266 WD40 repeat-containing protein 77 6e-14
SPBC6B1.10 [S] KOG0282 mRNA splicing factor 70 5e-12
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 70 5e-12
7290331 [R] KOG0266 WD40 repeat-containing protein 69 1e-11
At3g18130 [T] KOG0279 G protein beta subunit-like protein 67 5e-11
7297305 [T] KOG0279 G protein beta subunit-like protein 67 7e-11
At1g48630 [T] KOG0279 G protein beta subunit-like protein 66 1e-10
Hs5174447 [T] KOG0279 G protein beta subunit-like protein 65 2e-10
7302979 [S] KOG0295 WD40 repeat-containing protein 65 2e-10
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 64 3e-10
Hs7706657 [S] KOG0282 mRNA splicing factor 64 4e-10
At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S ... 64 4e-10
At5g25150 [K] KOG0263 Transcription initiation factor TFIID subu... 64 6e-10
7293146 [R] KOG0286 G-protein beta subunit 63 7e-10
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 63 9e-10
7300806 [S] KOG0282 mRNA splicing factor 63 9e-10
At4g02730 [R] KOG0266 WD40 repeat-containing protein 62 1e-09
At1g10580 [S] KOG0282 mRNA splicing factor 62 1e-09
7300458 [R] KOG0275 Conserved WD40 repeat-containing protein 62 1e-09
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 62 2e-09
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 61 3e-09
Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein 61 4e-09
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 61 4e-09
Hs4504053 [R] KOG0286 G-protein beta subunit 60 5e-09
Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S... 60 5e-09
Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 60 5e-09
Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 60 5e-09
At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein 60 5e-09
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 60 6e-09
CE29339 [S] KOG0295 WD40 repeat-containing protein 60 6e-09
CE00901 [R] KOG0266 WD40 repeat-containing protein 60 6e-09
7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 60 6e-09
CE06090 [T] KOG0279 G protein beta subunit-like protein 60 8e-09
SPAC31A2.14 [S] KOG0308 Conserved WD40 repeat-containing protein 59 1e-08
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 58 2e-08
At1g18080 [T] KOG0279 G protein beta subunit-like protein 58 2e-08
CE02186 [R] KOG0286 G-protein beta subunit 58 3e-08
YCR084c [R] KOG0266 WD40 repeat-containing protein 57 4e-08
SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein 57 4e-08
Hs5729852 [R] KOG0286 G-protein beta subunit 57 4e-08
Hs20336270 [R] KOG0286 G-protein beta subunit 57 4e-08
7299285 [R] KOG4155 FOG: WD40 repeat 57 4e-08
SPBC244.03 [U] KOG0276 Vesicle coat complex COPI beta' subunit 57 5e-08
Hs20357529 [R] KOG0286 G-protein beta subunit 57 5e-08
At3g49660 [R] KOG0266 WD40 repeat-containing protein 57 5e-08
YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 57 7e-08
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 57 7e-08
CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 57 7e-08
SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subun... 56 9e-08
At4g15900 [A] KOG0285 Pleiotropic regulator 1 56 9e-08
7303687 [K] KOG0263 Transcription initiation factor TFIID subuni... 56 9e-08
7302720 [R] KOG0266 WD40 repeat-containing protein 56 9e-08
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 56 9e-08
Hs11321585 [R] KOG0286 G-protein beta subunit 56 1e-07
7298279 [S] KOG0316 Conserved WD40 repeat-containing protein 56 1e-07
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 55 2e-07
Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit 55 2e-07
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 55 2e-07
CE11748 [R] KOG0266 WD40 repeat-containing protein 55 2e-07
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 54 3e-07
At3g16650 [A] KOG0285 Pleiotropic regulator 1 54 3e-07
Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 54 4e-07
Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 54 4e-07
Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 54 4e-07
ECU08g1250 [U] KOG0276 Vesicle coat complex COPI beta' subunit 54 4e-07
At5g50230 [R] KOG0288 WD40 repeat protein TipD 54 4e-07
At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit 54 4e-07
At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit 54 4e-07
YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 54 6e-07
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 54 6e-07
SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID su... 54 6e-07
Hs11055998 [R] KOG0286 G-protein beta subunit 54 6e-07
At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit 54 6e-07
SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18... 53 8e-07
Hs7657381 [R] KOG0289 mRNA splicing factor 53 8e-07
CE28405 [S] KOG0282 mRNA splicing factor 53 8e-07
Hs13376840 [R] KOG4155 FOG: WD40 repeat 53 1e-06
CE18673 [U] KOG0276 Vesicle coat complex COPI beta' subunit 53 1e-06
CE17845 [R] KOG0286 G-protein beta subunit 53 1e-06
7303631 [S] KOG0308 Conserved WD40 repeat-containing protein 53 1e-06
7290895 [R] KOG0286 G-protein beta subunit 53 1e-06
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 52 1e-06
SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 52 1e-06
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 52 1e-06
CE02005 [R] KOG0288 WD40 repeat protein TipD 52 1e-06
SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor an... 52 2e-06
SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein 52 2e-06
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 52 2e-06
CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 52 2e-06
At2g32700 [R] KOG0266 WD40 repeat-containing protein 52 2e-06
7302603 [R] KOG0289 mRNA splicing factor 52 2e-06
7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 52 2e-06
YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 52 2e-06
Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein 52 2e-06
Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 52 2e-06
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 52 2e-06
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 52 2e-06
ECU08g1180 [K] KOG0263 Transcription initiation factor TFIID sub... 51 3e-06
YNL006w [R] KOG0315 G-protein beta subunit-like protein (contain... 51 4e-06
SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (c... 51 4e-06
CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 51 4e-06
SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 50 5e-06
At5g49200 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 50 5e-06
7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 50 5e-06
YDR364c [S] KOG0282 mRNA splicing factor 50 6e-06
Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/... 50 6e-06
Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 50 6e-06
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 50 6e-06
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 50 6e-06
7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 50 6e-06
7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit 50 6e-06
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 50 8e-06
>YGL004c [R] KOG0266 WD40 repeat-containing protein
Length = 417
Score = 191 bits (486), Expect = 1e-48
Identities = 124/373 (33%), Positives = 188/373 (50%), Gaps = 35/373 (9%)
Query: 66 SFQRVRPHLYE--LTGPDATAGHLASFQSPKKRFQLPSDIGAVDLTSIDITNVFDPEIRL 123
+F++V HLY+ L G D + S + +D AVD + + R
Sbjct: 60 TFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLK---RADYTAVDTAKLQMR-------RF 109
Query: 124 VCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLK 183
+ G T G I VL N LQ ++ +AH S ITK +FFP+G +SSS DM+LK
Sbjct: 110 ILGTTEGDIKVLDSNFN------LQR--EIDQAHVSEITKLKFFPSGEALISSSQDMQLK 161
Query: 184 IWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTL----N 239
IW G+ RT IGH +V D A++DRGRN +SAS DG+++LWEC T + T N
Sbjct: 162 IWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKEN 221
Query: 240 SNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKILD 299
+DG+N I+L + ++ E+ T GK V AGH SG+IT H+++++++ +
Sbjct: 222 PHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQ 281
Query: 300 ILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDTRNVSKPVETLQVNDNDSISRLF 359
+ +C +LT + +Y++AGY +G + WD R+ PV +N+ I+ ++
Sbjct: 282 LPSKFTCSCNSLTVD--GNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVY 339
Query: 360 LAHNTLNVSSGVQFAFNVPVLDG------KFNFNKLTHLIRPYDEVTDFCV---DESHQN 410
A L VSSG + + ++ F T L+ DEV+ FC DES+
Sbjct: 340 FAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDEVSQFCYVSDDESNGE 399
Query: 411 VWCVGKNGMLLKY 423
V VGKN Y
Sbjct: 400 VLEVGKNNFCALY 412
>Hs13376751 [R] KOG0266 WD40 repeat-containing protein
Length = 392
Score = 101 bits (251), Expect = 2e-21
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 9/223 (4%)
Query: 128 TNGGIYVLRKNTGTN--YSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIW 185
+ GG+ V GT + E+ ++ E H + +FFP+G LS +D +LKIW
Sbjct: 102 SRGGLGVSSSTDGTMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIW 161
Query: 186 DASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTL-NSNDGI 244
A + + TF GH + D A+VDRGRN VSAS DG+ +LW+C SAC+ L + I
Sbjct: 162 SAEDASCVVTFKGHKGGILDTAIVDRGRNVVSASRDGTARLWDCGRSACLGVLADCGSSI 221
Query: 245 NCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPAS 304
N +++ + S + E TE K + + + + +R+ + + +
Sbjct: 222 NGVAVGAADNSINLGSPEQMPSEREVGTEAKMLLLAREDKKLQCLGLQSRQLVFLFIGSD 281
Query: 305 KSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDTRNVSKPVETL 347
C T S + L AG DG I D R+ PV+ +
Sbjct: 282 AFNCCTFLSGFL------LLAGTQDGNIYQLDVRSPRAPVQVI 318
>CE28982 [R] KOG0266 WD40 repeat-containing protein
Length = 401
Score = 76.6 bits (187), Expect = 6e-14
Identities = 54/236 (22%), Positives = 105/236 (43%), Gaps = 39/236 (16%)
Query: 124 VCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLK 183
V D++G + + T E + H I + +FP+G + +DM ++
Sbjct: 127 VAADSSGKLIIANSRTA--------ETLTELTGHTMDIYRCMYFPSGLVVIGGGMDMAIR 178
Query: 184 IWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDG 243
+W +TF+GHT++V F ++ GR F+S S+DG+++ W C +A T + G
Sbjct: 179 VWAVDKVPAQKTFVGHTKAVTGFGIIGVGREFLSCSNDGTVRFWSCKNAAPTETWSFEKG 238
Query: 244 INCISLA------NYQGNPATTSYNALD-HSNEYNTE-----------------GKAVFA 279
CI +A + +A+D H ++ + GKAVF
Sbjct: 239 -KCIDMAMSVDDSRFAVICENNFLSAIDLHGDKIRRDIQLPSVPTALCFSGDEGGKAVFV 297
Query: 280 GHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSW 335
G + G + +++ +R+ I +I+ +K VT + + L A ++ G ++++
Sbjct: 298 GFEDGHVAAYNVSDRRLIGEIV--TKKGSVTCLKYYC----NRLIASFTTGNVLAF 347
>SPBC6B1.10 [S] KOG0282 mRNA splicing factor
Length = 558
Score = 70.5 bits (171), Expect = 5e-12
Identities = 36/95 (37%), Positives = 54/95 (55%), Gaps = 2/95 (2%)
Query: 155 EAHASHITKTQFFP-NGHGFLSSSIDMRLKIWDASTGTEL-RTFIGHTRSVNDFAMVDRG 212
+ H I+ +FFP +GH LS S+D ++KIW+ L RTF GH R + D + G
Sbjct: 263 KGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDG 322
Query: 213 RNFVSASSDGSLKLWECSTSACVFTLNSNDGINCI 247
R+F+S S D ++KLW+ C+ NS+ NC+
Sbjct: 323 RSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCV 357
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 70.5 bits (171), Expect = 5e-12
Identities = 53/200 (26%), Positives = 84/200 (41%), Gaps = 25/200 (12%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H ++ +F PNG SSS D +KIW A G +T GH ++D A V
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 217 SASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKA 276
SAS D +LK+W+ S+ C+ TL + N + N +N +
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCN------------------FNPQSNL 143
Query: 277 VFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWD 336
+ +G + D+ K L LPA +++ H D + + DG WD
Sbjct: 144 IVSGSFDESVRIWDV-KTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 337 TRNVSKPVETLQVNDNDSIS 356
T + + ++TL +DN +S
Sbjct: 200 TAS-GQCLKTLIDDDNPPVS 218
Score = 56.6 bits (135), Expect = 7e-08
Identities = 48/217 (22%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 151 IKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVD 210
+K + H++++ F P + +S S D ++IWD TG L+T H+ V+
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 211 RGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEY 270
G VS+S DG ++W+ ++ C+ TL +D NP + ++
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD------------NPPVSFV-------KF 222
Query: 271 NTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDG 330
+ GK + A + D Y++ K L K+ + + ++ +G D
Sbjct: 223 SPNGKYILAATLDNTLKLWD-YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 281
Query: 331 TIVSWDTRNVSKPVETLQVNDNDSISRLFLAHNTLNV 367
+ W+ + + V+ LQ + + IS H T N+
Sbjct: 282 LVYIWNLQ-TKEIVQKLQGHTDVVIST--ACHPTENI 315
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 68.9 bits (167), Expect = 1e-11
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 25/200 (12%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H ++ +F PNG SSS D +KIW A G +T GH ++D A R V
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 130
Query: 217 SASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKA 276
S S D +LK+WE ST + TL + N + N +N +
Sbjct: 131 SGSDDKTLKVWELSTGKSLKTLKGHS--NYVFCCN------------------FNPQSNL 170
Query: 277 VFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWD 336
+ +G + D+ K L LPA +++ H D + + DG WD
Sbjct: 171 IVSGSFDESVRIWDV-RTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWD 226
Query: 337 TRNVSKPVETLQVNDNDSIS 356
T + + ++TL +DN +S
Sbjct: 227 TAS-GQCLKTLIDDDNPPVS 245
Score = 56.6 bits (135), Expect = 7e-08
Identities = 49/226 (21%), Positives = 94/226 (40%), Gaps = 29/226 (12%)
Query: 123 LVCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRL 182
LV G + + V +TG + +K + H++++ F P + +S S D +
Sbjct: 129 LVSGSDDKTLKVWELSTGKS--------LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 180
Query: 183 KIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSND 242
+IWD TG L+T H+ V+ G VS+S DG ++W+ ++ C+ TL +D
Sbjct: 181 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 240
Query: 243 GINCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKILDILP 302
NP + +++ GK + A + D Y++ K L
Sbjct: 241 ------------NPPVSFV-------KFSPNGKYILAATLDNTLKLWD-YSKGKCLKTYT 280
Query: 303 ASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDTRNVSKPVETLQ 348
K+ + + ++ +G D + W+ ++ + V+ LQ
Sbjct: 281 GHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQS-KEVVQKLQ 325
>At3g18130 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 67.0 bits (162), Expect = 5e-11
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 39/223 (17%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H+ + +G LS S D L++WD +TG R F+GHT+ V A R V
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIV 121
Query: 217 SASSDGSLKLWECSTSACVFTLNSNDG----INCISLANYQGNPATTS------------ 260
SAS D ++KLW + C +T++ DG ++C+ + P S
Sbjct: 122 SASRDRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 261 ------YNALDHSNEYNT-----EGKAVFAGHDSGIITFHDIYNRKKILDILPAS--KSA 307
+ + HS NT +G +G G+I D+ KK+ + S S
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSL 240
Query: 308 CVTLTSQHIAGDDHYLFAGYSDGTIVSWDTRNVSKPVETLQVN 350
C + + Y ++ +I WD + S VE L+V+
Sbjct: 241 CFS--------PNRYWLCAATENSIRIWDLESKS-VVEDLKVD 274
>7297305 [T] KOG0279 G protein beta subunit-like protein
Length = 318
Score = 66.6 bits (161), Expect = 7e-11
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 114 TNVFDPEIRLVCG-DTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHG 172
TN DP+ + D ++ L ++ TNY P + + H+ I+ +G+
Sbjct: 23 TNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLY----GHSHFISDVVLSSDGNY 78
Query: 173 FLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTS 232
LS S D L++WD + G R F GHT+ V A R VS S D ++KLW + +
Sbjct: 79 ALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN-TLA 137
Query: 233 ACVFTLNSN---DGINCISLANYQGNPATTS 260
C FT+ + D ++C+ + NP S
Sbjct: 138 ECKFTIQEDGHTDWVSCVRFSPNHSNPIIVS 168
>At1g48630 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 65.9 bits (159), Expect = 1e-10
Identities = 57/223 (25%), Positives = 90/223 (39%), Gaps = 39/223 (17%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H+ + +G LS S D L++WD +TG R F+GHT+ V A R V
Sbjct: 62 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIV 121
Query: 217 SASSDGSLKLWECSTSACVFTLNSNDG----INCISLANYQGNPATTSYN---------- 262
SAS D ++KLW + C +T++ DG ++C+ + P S +
Sbjct: 122 SASRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 263 --------ALDHSNEYNT-----EGKAVFAGHDSGIITFHDIYNRKKILDILPAS--KSA 307
HS NT +G +G G+I D+ KK+ + S S
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSL 240
Query: 308 CVTLTSQHIAGDDHYLFAGYSDGTIVSWDTRNVSKPVETLQVN 350
C + + Y ++ +I WD + S VE L+V+
Sbjct: 241 CFS--------PNRYWLCAATENSIRIWDLESKS-VVEDLKVD 274
>Hs5174447 [T] KOG0279 G protein beta subunit-like protein
Length = 317
Score = 65.1 bits (157), Expect = 2e-10
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 141 TNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHT 200
TNY P + + H+ ++ +G LS S D L++WD +TGT R F+GHT
Sbjct: 50 TNYGIPQRAL----RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT 105
Query: 201 RSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTL---NSNDGINCISLANYQGNPA 257
+ V A R VS S D ++KLW + C +T+ + ++ ++C+ + NP
Sbjct: 106 KDVLSVAFSSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 258 TTS 260
S
Sbjct: 165 IVS 167
Score = 52.4 bits (124), Expect = 1e-06
Identities = 48/185 (25%), Positives = 74/185 (39%), Gaps = 23/185 (12%)
Query: 155 EAHASHITKTQFFPNGHG--FLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRG 212
E+H+ ++ +F PN +S D +K+W+ + IGHT +N + G
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDG 204
Query: 213 RNFVSASSDGSLKLWECSTSACVFTLNSNDGIN--CISLANYQGNPATTSYNALDHSNEY 270
S DG LW+ + ++TL+ D IN C S Y AT + +
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKI-----W 259
Query: 271 NTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDG 330
+ EGK I + K I +SK+ TS + D LFAGY+D
Sbjct: 260 DLEGKI--------------IVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 305
Query: 331 TIVSW 335
+ W
Sbjct: 306 LVRVW 310
>7302979 [S] KOG0295 WD40 repeat-containing protein
Length = 411
Score = 64.7 bits (156), Expect = 2e-10
Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 22/200 (11%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAM 208
E IK H +++ F P G LS+S D +K+W+ +TG ++T+ GH V +
Sbjct: 184 ECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRV 243
Query: 209 VDRGRNFVSASSDGSLKLWECSTSACVFTLNSND-GINCISLANYQGNPATTSYNALDHS 267
G F + S+D ++++W ++ C L ++ + CI+ A A D+
Sbjct: 244 HIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNK 303
Query: 268 NEYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQH---IAG-----D 319
GH G F +R K + I S C+ S H + G
Sbjct: 304 K-----------GHHQG--PFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPG 350
Query: 320 DHYLFAGYSDGTIVSWDTRN 339
YL + D TI WD RN
Sbjct: 351 GKYLVSASDDKTIRVWDLRN 370
Score = 59.7 bits (143), Expect = 8e-09
Identities = 33/87 (37%), Positives = 49/87 (55%), Gaps = 1/87 (1%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H + IT+ F P +S+S D ++IWD TG R+ GHT SV D A +G+
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLA 166
Query: 217 SASSDGSLKLWECSTS-ACVFTLNSND 242
S S+D S+KLW+ S C+ T++ +D
Sbjct: 167 SCSADLSIKLWDFQQSYECIKTMHGHD 193
Score = 54.7 bits (130), Expect = 3e-07
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 154 PEAHASHITKTQFFPNGHG-----FLSS-SIDMRLKIWDASTGTELRTFIGHTRSVNDFA 207
PEA AS I + N G FL+S S D ++IWD S G L T GH V A
Sbjct: 287 PEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLA 346
Query: 208 MVDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTS 260
G+ VSAS D ++++W+ C+ TL ++ C S+ ++ +P S
Sbjct: 347 FHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHF-CTSIDFHKAHPYVIS 398
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 64.3 bits (155), Expect = 3e-10
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 127 DTNGGIYVLRKNTGTNYSGPLQE--VIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKI 184
D + G+ +GT L+E V++ H S+ F P G F S S+D LKI
Sbjct: 161 DASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKI 220
Query: 185 WDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDG 243
WD + T+ GHTR VN GR VS D +K+W+ + + S++G
Sbjct: 221 WDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG 279
>Hs7706657 [S] KOG0282 mRNA splicing factor
Length = 579
Score = 63.9 bits (154), Expect = 4e-10
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 157 HASHITKTQFFP-NGHGFLSSSIDMRLKIWDASTGTE-LRTFIGHTRSVNDFAMVDRGRN 214
H ++ + FP +GH LS S+D ++K+W+ LRTFIGH+++V D G
Sbjct: 287 HTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQ 346
Query: 215 FVSASSDGSLKLWECSTSACVFTLNSNDGINCI 247
F+SA+ D LKLW+ T C+ + C+
Sbjct: 347 FLSAAYDRYLKLWDTETGQCISRFTNRKVPYCV 379
>At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 876
Score = 63.9 bits (154), Expect = 4e-10
Identities = 40/139 (28%), Positives = 66/139 (46%), Gaps = 11/139 (7%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRN 214
+ H I +F +++S D +KIW S G+ L+TF GHT SV + + G
Sbjct: 538 KGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQ 597
Query: 215 FVSASSDGSLKLWECSTSACVFTLNSND--------GINCISLANYQGNPATTSYN---A 263
FVS +DG LKLW +TS C+ T + ++ G +A G+ ++ A
Sbjct: 598 FVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTA 657
Query: 264 LDHSNEYNTEGKAVFAGHD 282
D +++ E +A+ G +
Sbjct: 658 SDKEDDFRKEEEAILRGQE 676
>At5g25150 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 700
Score = 63.5 bits (153), Expect = 6e-10
Identities = 30/96 (31%), Positives = 51/96 (52%), Gaps = 2/96 (2%)
Query: 158 ASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVS 217
A H++ + PN + + S D +++WD TG +R FIGH V AM GR S
Sbjct: 499 AGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMAS 558
Query: 218 ASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQ 253
DG++ +W+ ST+ C+ L ++ +C+ +Y+
Sbjct: 559 GDEDGTIMMWDLSTARCITPLMGHN--SCVWSLSYR 592
>7293146 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 63.2 bits (152), Expect = 7e-10
Identities = 57/251 (22%), Positives = 103/251 (40%), Gaps = 35/251 (13%)
Query: 123 LVCG--DTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDM 180
+ CG D IY L+ G ++ +LP H +++ +F + ++SS DM
Sbjct: 112 VACGGLDNMCSIYNLKTREGN-----VRVSRELP-GHGGYLSCCRFLDDNQ-IVTSSGDM 164
Query: 181 RLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNS 240
+WD TG ++ +F+GHT V ++ + + FVS + D S KLW+ C T
Sbjct: 165 SCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPG 224
Query: 241 NDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKILD 299
++ IN ++ + G+A G D DI +++
Sbjct: 225 HESDINAVT---------------------FFPNGQAFATGSDDATCRLFDIRADQEL-- 261
Query: 300 ILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDTRNVSKPVETLQVNDNDSISRLF 359
+ + + +TS + L AGY D WDT + + ++ +S L
Sbjct: 262 AMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAER--SGILAGHDNRVSCLG 319
Query: 360 LAHNTLNVSSG 370
+ N + V++G
Sbjct: 320 VTENGMAVATG 330
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 62.8 bits (151), Expect = 9e-10
Identities = 31/86 (36%), Positives = 47/86 (54%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H S +T+ F P +S+S D +K+WD TG RT GHT SV D + G+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 217 SASSDGSLKLWECSTSACVFTLNSND 242
S S+D ++KLW+ C+ T++ +D
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHD 192
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRN 214
+ H + F +G S S DM +K+WD +RT GH +V+ A++ G +
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 215 FVSASSDGSLKLWECSTSACVFTLNSN 241
VSAS D ++K+WE T CV T +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGH 233
Score = 58.2 bits (139), Expect = 2e-08
Identities = 47/210 (22%), Positives = 91/210 (42%), Gaps = 17/210 (8%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAM 208
E I+ H +++ PNG +S+S D +K+W+ TG ++TF GH V
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 209 VDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDG-INCISLANYQGNPATTSYNALDHS 267
G S S+D ++++W +T C L ++ + CIS A +SY+++ +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA------PESSYSSISEA 296
Query: 268 NEYNTE-----GKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHY 322
T+ G + +G I D+ ++ ++ V H G +
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGG--KF 352
Query: 323 LFAGYSDGTIVSWDTRNVSKPVETLQVNDN 352
+ + D T+ WD +N + ++TL +++
Sbjct: 353 ILSCADDKTLRVWDYKN-KRCMKTLNAHEH 381
>7300806 [S] KOG0282 mRNA splicing factor
Length = 576
Score = 62.8 bits (151), Expect = 9e-10
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 95 KRFQLPSDIGAVDLTSIDITNVFDPEIRLVCGDTNGGIYVLRKNTGTNYSGPLQEVIKLP 154
KR ++P D + +++ I + +D + R + LR N + I
Sbjct: 222 KRGRIPEDKPLEEKSTLHIKDAYDYQGRSYLHAPHDLGVNLRSNAPPTKCFLPKAHIHTW 281
Query: 155 EAHASHITKTQFFPN-GHGFLSSSIDMRLKIWDASTGTE-LRTFIGHTRSVNDFAMVDRG 212
H I+ ++FP H LS S+D R+K+W+ +RTF GH +++ D A +RG
Sbjct: 282 SGHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRTFSGHRQAIKDIAWNNRG 341
Query: 213 RNFVSASSDGSLKLWECSTSACV 235
NF+SAS D +KLW+ T V
Sbjct: 342 TNFLSASYDRYIKLWDAETGDVV 364
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 62.4 bits (150), Expect = 1e-09
Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 22/199 (11%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAM 208
E +K+ H + + F P + +S S D ++IW+ TG +R H+ ++
Sbjct: 119 ECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHF 178
Query: 209 VDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSN 268
G VSAS DGS K+W+ C+ TL +D +S A + N LD +
Sbjct: 179 NRDGSLIVSASHDGSCKIWDAKEGTCLKTL-IDDKSPAVSFAKFSPNGKFILVATLDSTL 237
Query: 269 EYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYS 328
+ + Y K L + + +TS + Y+ +G
Sbjct: 238 KLSN-------------------YATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSE 278
Query: 329 DGTIVSWD--TRNVSKPVE 345
D + WD RN+ + +E
Sbjct: 279 DNCVYLWDLQARNILQRLE 297
Score = 51.2 bits (121), Expect = 3e-06
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 138 NTGTNYSGPLQEV---IKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELR 194
N GT+ + P+ + +K E H + I+ +F +G+ S+S+D + +W A+ + +
Sbjct: 20 NAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIH 79
Query: 195 TFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWEC-STSACVFTLNSNDG-INCISLANY 252
+ GH+ ++D A SAS D +L++W+ S C+ L + + C++
Sbjct: 80 RYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVN---- 135
Query: 253 QGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLT 312
+N + +G I ++ K + I K+ + ++
Sbjct: 136 -----------------FNPPSNLIVSGSFDETIRIWEVKTGKCVRMI----KAHSMPIS 174
Query: 313 SQHIAGDDHYLFAGYSDGTIVSWDTR 338
S H D + + DG+ WD +
Sbjct: 175 SVHFNRDGSLIVSASHDGSCKIWDAK 200
>At1g10580 [S] KOG0282 mRNA splicing factor
Length = 616
Score = 62.4 bits (150), Expect = 1e-09
Identities = 28/86 (32%), Positives = 51/86 (58%), Gaps = 2/86 (2%)
Query: 157 HASHITKTQFFPN-GHGFLSSSIDMRLKIWDA-STGTELRTFIGHTRSVNDFAMVDRGRN 214
H ++ +FFP GH LS+ +D ++KIWD ++G +RT++GH ++V D + G
Sbjct: 281 HTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSK 340
Query: 215 FVSASSDGSLKLWECSTSACVFTLNS 240
F++A D ++K W+ T + T ++
Sbjct: 341 FLTAGYDKNIKYWDTETGQVISTFST 366
>7300458 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 486
Score = 62.4 bits (150), Expect = 1e-09
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 126 GDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIW 185
G +G I V R TG Q + K +AH IT QF + LS+S D +++
Sbjct: 259 GAQDGQIKVWRIITG-------QCLRKFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLH 311
Query: 186 DASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFT 237
+G L+ F GH+ VN+ G + +SASSDG++K+W T+ CV T
Sbjct: 312 GLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTECVAT 363
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 62.0 bits (149), Expect = 2e-09
Identities = 59/229 (25%), Positives = 84/229 (35%), Gaps = 29/229 (12%)
Query: 155 EAHASHITKT-QFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVD-RG 212
E H TK+ G F++ S D K+WD ++G EL T GH V A + G
Sbjct: 5 EKHGELKTKSIDLLDLGPSFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYG 64
Query: 213 RNFVSASSDGSLKLWECSTSACVFTLNSNDG-INCISLANYQGNPATTS----------- 260
+ S D + KLW T C T + I C+S AT S
Sbjct: 65 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 124
Query: 261 -----YNALDHSNE-----YNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVT 310
Y HS E +NT G + G + D +K+ ++ C
Sbjct: 125 NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILI----GHCAE 180
Query: 311 LTSQHIAGDDHYLFAGYSDGTIVSWDTRNVSKPVETLQVNDNDSISRLF 359
++S D + G D T WD N K V TL +D++ + F
Sbjct: 181 ISSASFNWDCSLILTGSMDKTCKLWDATN-GKCVATLTGHDDEILDSCF 228
Score = 53.9 bits (128), Expect = 4e-07
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 122 RLVCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMR 181
R++ G + + V +TG + + H + I+ F + L+ S+D
Sbjct: 150 RIITGSFDHTVVVWDADTGRK--------VNILIGHCAEISSASFNWDCSLILTGSMDKT 201
Query: 182 LKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSN 241
K+WDA+ G + T GH + D G+ +AS+DG+ +++ +T C+ L +
Sbjct: 202 CKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGH 261
Query: 242 DG-INCISLANYQGNPATT 259
+G I+ IS N QGN T
Sbjct: 262 EGEISKISF-NPQGNHLLT 279
Score = 50.1 bits (118), Expect = 6e-06
Identities = 32/97 (32%), Positives = 43/97 (43%), Gaps = 2/97 (2%)
Query: 118 DPEIRLVCGDTNGGIYVLRKNTGTN--YSGPLQEVIKLPEAHASHITKTQFFPNGHGFLS 175
D EI C D G + GT +S ++ I E H I+K F P G+ L+
Sbjct: 220 DDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLT 279
Query: 176 SSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRG 212
S D +IWDA TG L+ GHT + A +G
Sbjct: 280 GSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKG 316
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 61.2 bits (147), Expect = 3e-09
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 25/200 (12%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H ++ +F PNG SSS D + IW A G +T GH ++D A V
Sbjct: 40 HTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLV 99
Query: 217 SASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKA 276
SAS D +LKLW+ + C+ TL + N + N +N
Sbjct: 100 SASDDKTLKLWDVRSGKCLKTLKGHS--NYVFCCN------------------FNPPSNL 139
Query: 277 VFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWD 336
+ +G + ++ K L L A +++ H + +G DG WD
Sbjct: 140 IISGSFDETVKIWEV-KTGKCLKTLSAHSD---PVSAVHFNCSGSLIVSGSYDGLCRIWD 195
Query: 337 TRNVSKPVETLQVNDNDSIS 356
+ + ++TL +DN +S
Sbjct: 196 AAS-GQCLKTLVDDDNPPVS 214
Score = 54.3 bits (129), Expect = 3e-07
Identities = 44/206 (21%), Positives = 85/206 (40%), Gaps = 21/206 (10%)
Query: 151 IKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVD 210
+K + H++++ F P + +S S D +KIW+ TG L+T H+ V+
Sbjct: 118 LKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNC 177
Query: 211 RGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEY 270
G VS S DG ++W+ ++ C+ TL +D NP + ++
Sbjct: 178 SGSLIVSGSYDGLCRIWDAASGQCLKTLVDDD------------NPPVSFV-------KF 218
Query: 271 NTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDG 330
+ GK + + D Y+R + L K+ + + ++ +G D
Sbjct: 219 SPNGKYILTATLDNTLKLWD-YSRGRCLKTYTGQKNEKYCIFANFSVTGGKWIVSGSEDN 277
Query: 331 TIVSWDTRNVSKPVETLQVNDNDSIS 356
+ W+ + + V+ LQ + + IS
Sbjct: 278 LVYIWNLQ-TKEIVQKLQGHTDVVIS 302
>Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 513
Score = 60.8 bits (146), Expect = 4e-09
Identities = 36/118 (30%), Positives = 56/118 (46%), Gaps = 7/118 (5%)
Query: 123 LVCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRL 182
L G +G I V + +G Q + + AH+ +T F + LS+S D +
Sbjct: 279 LATGAQDGKIKVWKIQSG-------QCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 183 KIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNS 240
+I +G L+ F GH+ VN+ G +SASSDG++K+W T+ C T S
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKS 389
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 60.8 bits (146), Expect = 4e-09
Identities = 30/95 (31%), Positives = 45/95 (46%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAM 208
++++ H S+ F P G F S S+D LKIWD + T+ GHTR VN
Sbjct: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRF 151
Query: 209 VDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDG 243
GR VS D +K+W+ + + S++G
Sbjct: 152 TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG 186
>Hs4504053 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 60.5 bits (145), Expect = 5e-09
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 37/252 (14%)
Query: 123 LVCG--DTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDM 180
+ CG D IY L+ G +V + AH +++ +F + + ++SS D
Sbjct: 112 VACGGLDNMCSIYNLKSREGN------VKVSRELSAHTGYLSCCRFLDDNN-IVTSSGDT 164
Query: 181 RLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSAC--VFTL 238
+WD TG + F+GHT A+ F+S + D S KLW+ C FT
Sbjct: 165 TCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 239 NSNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKIL 298
+ +D IN I + G+A+ G D D+ +++
Sbjct: 225 HESD-INAIC---------------------FFPNGEAICTGSDDASCRLFDLRADQEL- 261
Query: 299 DILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDTRNVSKPVETLQVNDNDSISRL 358
I + +S +TS + LFAGY D WD+ S+ V L +DN +S L
Sbjct: 262 -ICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMK-SERVGILSGHDN-RVSCL 318
Query: 359 FLAHNTLNVSSG 370
+ + + V++G
Sbjct: 319 GVTADGMAVATG 330
>Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 808
Score = 60.5 bits (145), Expect = 5e-09
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 146 PLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVND 205
P +++ + H + QF P ++S D +K+W + L+TF GH SV
Sbjct: 509 PQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLK 568
Query: 206 FAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSND----GINCISLANYQGNPATTS 260
A V RG +S+ SDG +KLW + CV TL++++ G++C L ++ A+ S
Sbjct: 569 VAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDS 627
>Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 707
Score = 60.5 bits (145), Expect = 5e-09
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 133 YVLRKNTGTNYSGPLQEVIKLPEAHASH-ITKTQFFPNGHGFLSSSIDMRLKIWDASTGT 191
Y+ + TN+ + K+ + H H IT QF G+ +S S D LK+W A TG
Sbjct: 355 YIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGK 412
Query: 192 ELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDG-INCISL 249
LRT +GHT V M R +S S+D +LK+W T C+ TL + + C+ L
Sbjct: 413 CLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 469
Score = 52.8 bits (125), Expect = 1e-06
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSA 233
+S S D LK+W+A TG + T GHT +V + ++ VS S D +L++W+ T
Sbjct: 435 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQ 492
Query: 234 CVFTLNSNDGINCISLANYQGNPATT-SYNALDHSNEYNTEGKA-VFAGHDSGI--ITFH 289
C+ L + + + Y G + +Y+ + + TE GH + + + F
Sbjct: 493 CLHVLMGH--VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 550
Query: 290 DIYNRKKILD----ILPASKSACVTLTSQH------IAGDDHYLFAGYSDGTIVSWDTRN 339
I+ LD + C+ + H + D+ L +G +D T+ WD +
Sbjct: 551 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK- 609
Query: 340 VSKPVETLQ 348
+ ++TLQ
Sbjct: 610 TGQCLQTLQ 618
Score = 52.4 bits (124), Expect = 1e-06
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 12/125 (9%)
Query: 120 EIRLVCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSID 179
E R+V G + + V TG + + + H + + Q+ +G +S + D
Sbjct: 471 EKRVVSGSRDATLRVWDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYD 520
Query: 180 MRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLN 239
+K+WD T T L T GHT V +++ G + VS S D S+++W+ T C+ TL
Sbjct: 521 FMVKVWDPETETCLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT 578
Query: 240 SNDGI 244
+ +
Sbjct: 579 GHQSL 583
>Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 627
Score = 60.5 bits (145), Expect = 5e-09
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 133 YVLRKNTGTNYSGPLQEVIKLPEAHASH-ITKTQFFPNGHGFLSSSIDMRLKIWDASTGT 191
Y+ + TN+ + K+ + H H IT QF G+ +S S D LK+W A TG
Sbjct: 275 YIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGK 332
Query: 192 ELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDG-INCISL 249
LRT +GHT V M R +S S+D +LK+W T C+ TL + + C+ L
Sbjct: 333 CLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 389
Score = 52.8 bits (125), Expect = 1e-06
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSA 233
+S S D LK+W+A TG + T GHT +V + ++ VS S D +L++W+ T
Sbjct: 355 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQ 412
Query: 234 CVFTLNSNDGINCISLANYQGNPATT-SYNALDHSNEYNTEGKA-VFAGHDSGI--ITFH 289
C+ L + + + Y G + +Y+ + + TE GH + + + F
Sbjct: 413 CLHVLMGH--VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 470
Query: 290 DIYNRKKILD----ILPASKSACVTLTSQH------IAGDDHYLFAGYSDGTIVSWDTRN 339
I+ LD + C+ + H + D+ L +G +D T+ WD +
Sbjct: 471 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK- 529
Query: 340 VSKPVETLQ 348
+ ++TLQ
Sbjct: 530 TGQCLQTLQ 538
Score = 52.4 bits (124), Expect = 1e-06
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 12/125 (9%)
Query: 120 EIRLVCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSID 179
E R+V G + + V TG + + + H + + Q+ +G +S + D
Sbjct: 391 EKRVVSGSRDATLRVWDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYD 440
Query: 180 MRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLN 239
+K+WD T T L T GHT V +++ G + VS S D S+++W+ T C+ TL
Sbjct: 441 FMVKVWDPETETCLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT 498
Query: 240 SNDGI 244
+ +
Sbjct: 499 GHQSL 503
>At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 522
Score = 60.5 bits (145), Expect = 5e-09
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 123 LVCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRL 182
L G +G I + R TG I+ +AH+ +T F +G LS+S D
Sbjct: 289 LASGSQDGKIKIWRIRTGV--------CIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTA 340
Query: 183 KIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFT 237
+I +G L+ F GHT VN G ++ASSD ++K+W+ T+ C+ T
Sbjct: 341 RIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQT 395
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 60.1 bits (144), Expect = 6e-09
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H+ + T F P+ LS S D +++W T T L ++ GH V D + G F
Sbjct: 524 HSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFA 583
Query: 217 SASSDGSLKLWECS--TSACVFTLNSNDGINCISLAN-----YQGNPATT---------- 259
+AS D + +LW C +F + ND ++C+S + G+ T
Sbjct: 584 TASHDQTARLWSCDHIYPLRIFAGHLND-VDCVSFHPNGCYVFTGSSDKTCRMWDVSTGD 642
Query: 260 ------SYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTS 313
+ A S +G+ + G + GII DI K++ + K+A +L+
Sbjct: 643 SVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLS- 701
Query: 314 QHIAGDDHYLFAGYSDGTIVSWDTRNVS 341
+ + + L +G +D T+ WD + +
Sbjct: 702 --YSKEGNVLISGGADHTVRVWDLKKAT 727
Score = 58.2 bits (139), Expect = 2e-08
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 151 IKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVD 210
+++ H + + F PNG + S D ++WD STG +R F+GHT V A+
Sbjct: 602 LRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCP 661
Query: 211 RGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHS 267
GR + S DG + +W+ T + + + G N I +Y DH+
Sbjct: 662 DGRWLSTGSEDGIINVWDIGTGKRLKQMRGH-GKNAIYSLSYSKEGNVLISGGADHT 717
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 60.1 bits (144), Expect = 6e-09
Identities = 35/87 (40%), Positives = 47/87 (53%), Gaps = 1/87 (1%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H IT+ F P S S D +K+WD TG RT GHT +VND A+ G+ V
Sbjct: 105 HRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLV 164
Query: 217 SASSDGSLKLWEC-STSACVFTLNSND 242
S SSD S+KLW+ T C+ +L ++
Sbjct: 165 SCSSDLSIKLWDFGQTYDCLKSLKGHE 191
Score = 56.6 bits (135), Expect = 7e-08
Identities = 37/129 (28%), Positives = 57/129 (43%), Gaps = 6/129 (4%)
Query: 145 GPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVN 204
G + +K + H ++ F P G LS+S D +K WD STG + TF GH V
Sbjct: 178 GQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVR 237
Query: 205 DFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSND-GINCISLANYQGNPATTSYNA 263
+ + G F SAS D ++ +W +T + L ++ + C+ A P T N
Sbjct: 238 MIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWA-----PDTAYTNV 292
Query: 264 LDHSNEYNT 272
E N+
Sbjct: 293 TGQQPEGNS 301
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 60.1 bits (144), Expect = 6e-09
Identities = 51/206 (24%), Positives = 80/206 (38%), Gaps = 29/206 (14%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRN 214
E H I+ +F P G +SS D +KIW+ RT GH VND A R
Sbjct: 84 EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRC 143
Query: 215 FVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALD--------- 265
VSAS D +LK++E TS TL ++ N + N+ + + D
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHN--NYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 266 ----------HSN-----EYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVT 310
HS+ +N +G + +G G++ D N + I ++
Sbjct: 202 TGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAF 261
Query: 311 LTSQHIAGDDHYLFAGYSDGTIVSWD 336
+ + + Y+ A D T+ WD
Sbjct: 262 V---KFSPNGKYILASNLDSTLKLWD 284
>7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 1326
Score = 60.1 bits (144), Expect = 6e-09
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 152 KLPEAHASH-ITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVD 210
K+ + H H IT QF +G+ +S S D LK+W A G LRT +GHT V M
Sbjct: 988 KVLKGHDDHVITCLQF--SGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQM-- 1043
Query: 211 RGRNFVSASSDGSLKLWECSTSACVFTLNSNDG-INCISL 249
G +S S+D +LK+W+ + ACV TL + + C+ L
Sbjct: 1044 SGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHL 1083
>CE06090 [T] KOG0279 G protein beta subunit-like protein
Length = 325
Score = 59.7 bits (143), Expect = 8e-09
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 22/207 (10%)
Query: 145 GPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVN 204
GP+ ++ H ++ +G LS S D L++WD + G R FI HT+ V
Sbjct: 56 GPIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVL 115
Query: 205 DFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNAL 264
A R VS S D S+KLW + + C +T+ + + +S + +
Sbjct: 116 SVAFSADNRQIVSGSRDKSIKLWN-TLAQCKYTITDDCHTDWVSTVRFSPS--------- 165
Query: 265 DHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLF 324
N + V AG D + ++ R K I VT ++ D
Sbjct: 166 ------NRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVT-----VSPDGSLCA 214
Query: 325 AGYSDGTIVSWDTRNVSKPVETLQVND 351
+G DG + WD N K + TL ND
Sbjct: 215 SGGKDGQAMLWDL-NEGKHLYTLPGND 240
>SPAC31A2.14 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 962
Score = 59.3 bits (142), Expect = 1e-08
Identities = 41/173 (23%), Positives = 75/173 (42%), Gaps = 34/173 (19%)
Query: 169 NGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWE 228
N + + + +++WD + + +GHT +V D + D GR ++ASSD ++KLW
Sbjct: 185 NNNIIANGGLQKDIQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIKLWS 244
Query: 229 CSTSACVFT-LNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIIT 287
C+F+ + +D + A Y +P + K +AG SG+IT
Sbjct: 245 LRAQKCLFSFIAHSDSV----WALYSEHP----------------DLKVFYAGDRSGLIT 284
Query: 288 FHDIYNRKKILDILPASKSACVTLTSQ-----HIAGDDHYLFAGYSDGTIVSW 335
DI N+ + +C + Q I ++++ DG+I+ W
Sbjct: 285 RTDIRNQ--------PNNQSCTAICKQDAPVSDIVARQSFIWSTSRDGSILRW 329
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 58.2 bits (139), Expect = 2e-08
Identities = 31/94 (32%), Positives = 45/94 (46%), Gaps = 1/94 (1%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H S + F PN L+ S D ++WD G +R F GHT+ V A+ G
Sbjct: 462 HLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMA 521
Query: 217 SASSDGSLKLWECSTSACVFTLNSNDGINCISLA 250
SA S+G + LW+ T + T+ + G N SL+
Sbjct: 522 SADSEGLIHLWDIGTGRRIKTMRGHRG-NIYSLS 554
Score = 57.0 bits (136), Expect = 5e-08
Identities = 54/217 (24%), Positives = 87/217 (39%), Gaps = 29/217 (13%)
Query: 156 AHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNF 215
+H+ + T F P+ LS S D ++W T T L + GHT V D A G F
Sbjct: 377 SHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYF 436
Query: 216 VSASSDGSLKLWECS--TSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTE 273
+AS D + +LW C VF + +D ++C++ S L S++
Sbjct: 437 ATASHDQTAQLWSCDHIYPLRVFAGHLSD-VDCVTF-------HPNSAYVLTGSSDKTCR 488
Query: 274 GKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIV 333
V GH + H +T+ IA D H + + S+G I
Sbjct: 489 LWDVHRGHSVRVFNGH------------------TQPVTAVAIAPDGHTMASADSEGLIH 530
Query: 334 SWDTRNVSKPVETLQVNDNDSISRLFLAHNTLNVSSG 370
WD + ++T++ + + S F +T+ VS G
Sbjct: 531 LWDI-GTGRRIKTMRGHRGNIYSLSFSRESTVLVSGG 566
>At1g18080 [T] KOG0279 G protein beta subunit-like protein
Length = 327
Score = 58.2 bits (139), Expect = 2e-08
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H+ + +G LS S D L++WD + G R F+GHT+ V A R V
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV 121
Query: 217 SASSDGSLKLWECSTSACVFTLNS-----NDGINCISLANYQGNPATTSYN---ALDHSN 268
SAS D ++KLW + C +T++ D ++C+ + P S + + N
Sbjct: 122 SASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Query: 269 EYNTEGKAVFAGHDSGIIT 287
N + ++ AGH + T
Sbjct: 181 LSNCKLRSTLAGHTGYVST 199
Score = 51.2 bits (121), Expect = 3e-06
Identities = 50/188 (26%), Positives = 83/188 (43%), Gaps = 19/188 (10%)
Query: 155 EAHASHITKTQFFPNG--HGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRG 212
E H ++ +F PN +S+S D +K+W+ S T GHT V+ A+ G
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 213 RNFVSASSDGSLKLWECSTSACVFTLNSNDGIN--CISLANYQGNPATTSYNALDHSNE- 269
S DG + LW+ + +++L +N I+ C S Y AT +H +
Sbjct: 207 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT------EHGIKI 260
Query: 270 YNTEGKAVFAGHDSGIITFHDIYNRKKILDIL--PASKSACVTLTSQHIAGDDHYLFAGY 327
++ E K++ D + D+ + D A+K + TS + + D LF+GY
Sbjct: 261 WDLESKSIV--EDLKV----DLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY 314
Query: 328 SDGTIVSW 335
+DG I W
Sbjct: 315 TDGVIRVW 322
>CE02186 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 57.8 bits (138), Expect = 3e-08
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 33/218 (15%)
Query: 123 LVCG--DTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDM 180
+ CG D IY L+ G ++ +LP H +++ +F + ++SS DM
Sbjct: 112 VACGGLDNICSIYSLKTREGN-----VRVSRELP-GHTGYLSCCRFLDDNQ-IVTSSGDM 164
Query: 181 RLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNS 240
+WD TG + F GHT V ++ R F+S + D S KLW+ C T
Sbjct: 165 TCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPG 224
Query: 241 NDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKILD 299
++ IN ++ + G A G D DI +++
Sbjct: 225 HESDINAVA---------------------FFPSGNAFATGSDDATCRLFDIRADQEL-- 261
Query: 300 ILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDT 337
+ + + +TS + LFAGY D WD+
Sbjct: 262 AMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDS 299
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 57.4 bits (137), Expect = 4e-08
Identities = 45/234 (19%), Positives = 86/234 (36%), Gaps = 38/234 (16%)
Query: 160 HITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSAS 219
+I F P+G + + D ++IWD + GH + + G VS S
Sbjct: 445 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS 504
Query: 220 SDGSLKLWECSTSACVFTLNSNDGINCISLANYQG------------------------- 254
D ++++W+ T C TL+ DG+ ++++ G
Sbjct: 505 GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVER 564
Query: 255 ----NPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVT 310
N + T + +S + +G++V +G + ++ N D + C
Sbjct: 565 LDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEV 624
Query: 311 LTSQH--------IAGDDHYLFAGYSDGTIVSWDTRNVSKPVETLQVNDNDSIS 356
H +D Y+ +G D ++ WD ++ P+ LQ + N IS
Sbjct: 625 TYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS-GNPLLMLQGHRNSVIS 677
>SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein
Length = 614
Score = 57.4 bits (137), Expect = 4e-08
Identities = 25/91 (27%), Positives = 45/91 (48%)
Query: 160 HITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSAS 219
++ F P+G ++ + D ++K+WD ST F GH + + GR VS S
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGS 421
Query: 220 SDGSLKLWECSTSACVFTLNSNDGINCISLA 250
D + +LW+ T C+ L +G+ I+++
Sbjct: 422 GDRTARLWDVETGQCILKLEIENGVTAIAIS 452
>Hs5729852 [R] KOG0286 G-protein beta subunit
Length = 353
Score = 57.4 bits (137), Expect = 4e-08
Identities = 51/225 (22%), Positives = 88/225 (38%), Gaps = 32/225 (14%)
Query: 123 LVCG--DTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDM 180
+ CG D +Y L + N + + V H ++++ F + L++S D
Sbjct: 120 IACGGLDNKCSVYPLTFDKNENMAAKKKSVAM----HTNYLSACSFTNSDMQILTASGDG 175
Query: 181 RLKIWDASTGTELRTFIGHTRSV--NDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTL 238
+WD +G L++F GH V D A + G FVS D +W+ + CV
Sbjct: 176 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF 235
Query: 239 NSNDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKI 297
+++ IN + Y G A +G D +D+ +++
Sbjct: 236 ETHESDINSV---------------------RYYPSGDAFASGSDDATCRLYDLRADREV 274
Query: 298 LDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDTRNVSK 342
+ + +S +S + LFAGY+D TI WD S+
Sbjct: 275 --AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 317
>Hs20336270 [R] KOG0286 G-protein beta subunit
Length = 395
Score = 57.4 bits (137), Expect = 4e-08
Identities = 51/225 (22%), Positives = 88/225 (38%), Gaps = 32/225 (14%)
Query: 123 LVCG--DTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDM 180
+ CG D +Y L + N + + V H ++++ F + L++S D
Sbjct: 162 IACGGLDNKCSVYPLTFDKNENMAAKKKSVAM----HTNYLSACSFTNSDMQILTASGDG 217
Query: 181 RLKIWDASTGTELRTFIGHTRSV--NDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTL 238
+WD +G L++F GH V D A + G FVS D +W+ + CV
Sbjct: 218 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF 277
Query: 239 NSNDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKI 297
+++ IN + Y G A +G D +D+ +++
Sbjct: 278 ETHESDINSV---------------------RYYPSGDAFASGSDDATCRLYDLRADREV 316
Query: 298 LDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDTRNVSK 342
+ + +S +S + LFAGY+D TI WD S+
Sbjct: 317 --AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 359
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 57.4 bits (137), Expect = 4e-08
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAM 208
+V++ E HA + F PN L++S D +K++D + + T GH V A
Sbjct: 203 KVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAF 262
Query: 209 VDRGRNFVSASSDGSLKLWECSTSACVFT 237
+ G++F S+SSD S+K+W+ S C+ T
Sbjct: 263 SEDGKHFASSSSDNSVKIWDTSERKCLHT 291
Score = 50.8 bits (120), Expect = 4e-06
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Query: 121 IRLVCGDTNGGIYVLRKNTGTN--YSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSI 178
+R +C N + + + G Y +V+ HAS + F +G F SSS
Sbjct: 215 VRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSS 274
Query: 179 DMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACV 235
D +KIWD S L TF HT V SAS D SL ++ C +A V
Sbjct: 275 DNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIYYCPPNAIV 331
>SPBC244.03 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 796
Score = 57.0 bits (136), Expect = 5e-08
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 124 VCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLK 183
VCG + + V NTG E + EAH +I P L+SS DM +K
Sbjct: 72 VCGSDDFQVRVYNYNTG--------EKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIK 123
Query: 184 I--WDASTGTELRTFIGHTRSVNDFAMVDRGRN-FVSASSDGSLKLWECSTSACVFTLNS 240
WD S ++TF GH+R V A+ + N F S+ DG++K+W +S FTL +
Sbjct: 124 CFNWDMSWKC-VQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQA 182
Query: 241 ND-GINCIS 248
+D G+N ++
Sbjct: 183 HDRGVNYVN 191
>Hs20357529 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 57.0 bits (136), Expect = 5e-08
Identities = 52/217 (23%), Positives = 85/217 (38%), Gaps = 33/217 (15%)
Query: 123 LVCG--DTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDM 180
+ CG D IY L+ G ++ +LP H +++ +F + ++SS D
Sbjct: 112 VACGGLDNICSIYSLKTREGN-----VRVSRELP-GHTGYLSCCRFLDDNQ-IITSSGDT 164
Query: 181 RLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFT-LN 239
+WD TG + F GH+ V ++ GR FVS + D S+KLW+ S C T +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 240 SNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKILD 299
IN ++ + G A G D D+ +++L
Sbjct: 225 HESDINAVA---------------------FFPNGYAFTTGSDDATCRLFDLRADQELL- 262
Query: 300 ILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWD 336
+ + + +TS + L AGY D WD
Sbjct: 263 -MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWD 298
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 57.0 bits (136), Expect = 5e-08
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 135 LRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELR 194
+R T + P+ E ++ H + I+ F + +S+S D LK+WD TG+ ++
Sbjct: 48 IRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIK 107
Query: 195 TFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNS-NDGINCISLANYQ 253
T IGHT + VS S D ++++W+ +T C+ L + +D + +
Sbjct: 108 TLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDG 167
Query: 254 GNPATTSYNAL 264
++SY+ L
Sbjct: 168 SLIVSSSYDGL 178
Score = 51.6 bits (122), Expect = 2e-06
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 5/164 (3%)
Query: 150 VIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMV 209
+IK H ++ F P + +S S D ++IWD +TG L+ H+ V
Sbjct: 105 LIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN 164
Query: 210 DRGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHS-- 267
G VS+S DG ++W+ T CV TL +D +S + N LD++
Sbjct: 165 RDGSLIVSSSYDGLCRIWDSGTGHCVKTL-IDDENPPVSFVRFSPNGKFILVGTLDNTLR 223
Query: 268 --NEYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACV 309
N + + + GH + ++ I+ S+ CV
Sbjct: 224 LWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
>YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 817
Score = 56.6 bits (135), Expect = 7e-08
Identities = 22/68 (32%), Positives = 43/68 (62%)
Query: 175 SSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSAC 234
+SS D +KIW T + ++T GHT +V + +++ + +S +DG +K+W+CS+ C
Sbjct: 550 TSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSGEC 609
Query: 235 VFTLNSND 242
+ TL+ ++
Sbjct: 610 LKTLDGHN 617
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 56.6 bits (135), Expect = 7e-08
Identities = 54/236 (22%), Positives = 90/236 (37%), Gaps = 28/236 (11%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRN 214
+ H + TQF P G+ F+S D ++W LR F GH VN
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 641
Query: 215 FVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEG 274
+ S+D +++LW+ LN NC+ + T + HS ++ G
Sbjct: 642 VATGSADRTVRLWD--------VLNG----NCVRI--------FTGHKGPIHSLTFSPNG 681
Query: 275 KAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVS 334
+ + G G + DI + + ++ K T+ S + D L +G D T+
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGEL----KGHTDTVCSLRFSRDGEILASGSMDNTVRL 737
Query: 335 WDTRNVSKPVETLQVND-NDSISRLFLAHNTLNVSSGVQFAFNVPVLDGKFNFNKL 389
WD K E L+ +D + + L N+ + G + PV+ F L
Sbjct: 738 WD---AIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNL 790
Score = 50.8 bits (120), Expect = 4e-06
Identities = 23/96 (23%), Positives = 43/96 (43%)
Query: 151 IKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVD 210
+++ H + + T+F PN + + S D +++WD G +R F GH ++
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
Query: 211 RGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINC 246
GR + ++DG + LW+ V L + C
Sbjct: 680 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 715
>CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 496
Score = 56.6 bits (135), Expect = 7e-08
Identities = 49/197 (24%), Positives = 78/197 (38%), Gaps = 25/197 (12%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRN 214
E H ++K F PNGH ++ D +++D +T EL GH++SV D A G
Sbjct: 293 EQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSV 352
Query: 215 FVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEG 274
++ D ++W+ T C+ L+ + HS E+ G
Sbjct: 353 ALTGGHDCYGRVWDMRTGRCIMFLD--------------------GHTKEIHSVEWMPNG 392
Query: 275 KAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVS 334
+ G + D+ R+ +PA S VT AG YL + D T+
Sbjct: 393 YEMITGSSDNSMKVWDLRMRRNTY-TMPAHTSV-VTRVRADAAG--QYLVSASFDCTLKM 448
Query: 335 WDTRNVSKPVETLQVND 351
W T +P+ LQ +D
Sbjct: 449 WSTTG-WQPLRQLQGHD 464
>SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 509
Score = 56.2 bits (134), Expect = 9e-08
Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 123 LVCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRL 182
L+ GD G + Y P +K+ +AH + F PN F+++S D L
Sbjct: 138 LISGDGGGMV---------KYFEPNLNNVKIVQAHEMEVRDVAFSPNDSKFVTASDDGSL 188
Query: 183 KIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSND 242
K+W+ TE GH V S S D +K W+ T C+ TL+ +
Sbjct: 189 KVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFWDPRTGTCIATLHGHK 248
Query: 243 GINCISLANYQGNPATTSYNALDHSNEYNT------EGKAVFAGHDSGI--ITFHDIY 292
N I A++Q N + + + + V GH+ + +T+H +Y
Sbjct: 249 --NTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKDVRVLRGHEKDVNCVTWHPLY 304
>At4g15900 [A] KOG0285 Pleiotropic regulator 1
Length = 486
Score = 56.2 bits (134), Expect = 9e-08
Identities = 45/194 (23%), Positives = 72/194 (36%), Gaps = 27/194 (13%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRN 214
+ H + F P+ F + S D +KIWD +TG T GH V A+ +R
Sbjct: 173 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTY 232
Query: 215 FVSASSDGSLKLWECSTSACVFTLNSN-DGINCISLANYQGNPATTSYNALDHSNEYNTE 273
SA D +K W+ + + + + + G+ C++L + LD
Sbjct: 233 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLAL-----------HPTLD-------- 273
Query: 274 GKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIV 333
+ G + DI + +I + + C T D + G D TI
Sbjct: 274 --VLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRP----TDPQVVTGSHDTTIK 327
Query: 334 SWDTRNVSKPVETL 347
WD R K + TL
Sbjct: 328 FWDLR-YGKTMSTL 340
>7303687 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 704
Score = 56.2 bits (134), Expect = 9e-08
Identities = 28/90 (31%), Positives = 45/90 (49%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAM 208
+ +++ H S + QF PN + + S D +++WD TG +R GH SV+ A
Sbjct: 525 QALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAF 584
Query: 209 VDRGRNFVSASSDGSLKLWECSTSACVFTL 238
GR S S D ++ +W+ S + V TL
Sbjct: 585 SACGRYLASGSVDHNIIIWDLSNGSLVTTL 614
Score = 50.8 bits (120), Expect = 4e-06
Identities = 39/186 (20%), Positives = 77/186 (40%), Gaps = 24/186 (12%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H + +F P+G+ F+S S D ++W + LR F+GH V+
Sbjct: 491 HVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVA 550
Query: 217 SASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKA 276
+ SSD +++LW+ T G + + ++G+ ++ +++A G+
Sbjct: 551 TGSSDRTVRLWDNMT-----------GQSVRLMTGHKGSVSSLAFSAC---------GRY 590
Query: 277 VFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWD 336
+ +G I D+ N + +L + T+T+ + D L A D + WD
Sbjct: 591 LASGSVDHNIIIWDLSNGSLVTTLLRHTS----TVTTITFSRDGTVLAAAGLDNNLTLWD 646
Query: 337 TRNVSK 342
V++
Sbjct: 647 FHKVTE 652
>7302720 [R] KOG0266 WD40 repeat-containing protein
Length = 307
Score = 56.2 bits (134), Expect = 9e-08
Identities = 35/107 (32%), Positives = 53/107 (48%), Gaps = 2/107 (1%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H+ +T +F NG +SSS D LK+WD S +++ GH VND A G
Sbjct: 55 HSGCVTGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGHGDGVNDVAWSAAGL-IA 113
Query: 217 SASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGN-PATTSYN 262
S S D +++LW+ + CV L + + N Q N A+TS++
Sbjct: 114 SCSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSFD 160
Score = 51.6 bits (122), Expect = 2e-06
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 151 IKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVD 210
+K+ E H+ + F P + S+S D +++WD TG L+ H +
Sbjct: 132 VKVLEGHSRYSFSCCFNPQANLLASTSFDETVRLWDVRTGKTLKIVHAHQDPITSVDFHR 191
Query: 211 RGRNFVSASSDGSLKLWECSTSACVFTLNSNDGI 244
G FV++S DG ++LW+ ST + TL D I
Sbjct: 192 DGNIFVTSSYDGLVRLWDSSTGHVLKTLVDVDNI 225
Score = 50.4 bits (119), Expect = 5e-06
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIG-HTRSVNDFA 207
+ +K+ AH IT F +G+ F++SS D +++WD+STG L+T + V
Sbjct: 172 KTLKIVHAHQDPITSVDFHRDGNIFVTSSYDGLVRLWDSSTGHVLKTLVDVDNIPVGYVK 231
Query: 208 MVDRGRNFVSASSDGSLKLWECSTSACVFT 237
GR +S++ + +L+LW C+ T
Sbjct: 232 FSPNGRYILSSTLNNTLRLWNYKKPKCMRT 261
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 56.2 bits (134), Expect = 9e-08
Identities = 43/191 (22%), Positives = 72/191 (37%), Gaps = 26/191 (13%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAM 208
E + H+ + + F P+G + S D L WD +TG R F GH VN
Sbjct: 89 ENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQG 148
Query: 209 VDRGRNFV-SASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHS 267
RG+ + S S D ++K+W+ TL S + +
Sbjct: 149 SRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVC------------------- 189
Query: 268 NEYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGY 327
+ G+ V +G + DI RK+ +L + T+T ++ + ++
Sbjct: 190 --FGDTGEQVISGGIDNEVKIWDI--RKQA--VLHHLRGHSDTITGMSLSPEGDFILTNA 243
Query: 328 SDGTIVSWDTR 338
D T+ WD R
Sbjct: 244 MDNTLRVWDVR 254
>Hs11321585 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 55.8 bits (133), Expect = 1e-07
Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 29/216 (13%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H +++ +F + ++SS D +WD TG + TF GHT V ++ R FV
Sbjct: 142 HTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200
Query: 217 SASSDGSLKLWECSTSAC--VFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEG 274
S + D S KLW+ C FT + +D IN I + G
Sbjct: 201 SGACDASAKLWDVREGMCRQTFTGHESD-INAIC---------------------FFPNG 238
Query: 275 KAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVS 334
A G D D+ ++++ + + +TS + L AGY D
Sbjct: 239 NAFATGSDDATCRLFDLRADQELMTY--SHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296
Query: 335 WDTRNVSKPVETLQVNDNDSISRLFLAHNTLNVSSG 370
WD + L +DN +S L + + + V++G
Sbjct: 297 WDALKADR-AGVLAGHDN-RVSCLGVTDDGMAVATG 330
>7298279 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 277
Score = 55.8 bits (133), Expect = 1e-07
Identities = 45/168 (26%), Positives = 74/168 (43%), Gaps = 30/168 (17%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSA 233
LS D ++K+W+ ++G L+T+ GH V D A VSAS D S+ W+ ST A
Sbjct: 33 LSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSSYIVSASLDKSIIYWDVSTGA 92
Query: 234 CVFTLNSN-DGINCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIY 292
V L S+ G+ C+ +N + +G + DI
Sbjct: 93 PVRRLRSHAGGVRCVC---------------------FNEDSSIAISGGRDNAVMCWDIR 131
Query: 293 NRKKILDILPASKSA--CVTLTSQHIAGDDHYLFAGYSDGTIVSWDTR 338
R+ LD + K A C+T +A +++ ++A DG + ++D R
Sbjct: 132 TRR--LDPVQVMKEARDCITT----VATNENRIYAASLDGCVRTYDIR 173
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 55.5 bits (132), Expect = 2e-07
Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 13/161 (8%)
Query: 74 LYELTGPDATAGHLASFQSPKKRFQLPSDIGAVDLTSIDITNVFDPEIRLVCGDTNGGIY 133
LY +G L SF P I A L +D L G T+ +
Sbjct: 397 LYFASGSHDRTARLWSFDRT-----YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 134 VLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTEL 193
+ G + ++L H + F PNG S+ D RLK+WD ++GT
Sbjct: 452 LWSAQQGNS--------VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 503
Query: 194 RTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSAC 234
+ GHT ++ SAS D S+++W+ + C
Sbjct: 504 KELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYC 544
>Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 906
Score = 55.5 bits (132), Expect = 2e-07
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTEL-RTFIGHTRSVNDFA 207
E + + EAH+ +I P L+SS DM +K+WD + F GHT V
Sbjct: 90 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIV 149
Query: 208 MVDRGRN-FVSASSDGSLKLWECSTSACVFTLNSND-GINCI 247
+ + N F SAS D ++K+W+ +S+ FTL ++ G+NCI
Sbjct: 150 INPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 191
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 55.5 bits (132), Expect = 2e-07
Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 26/185 (14%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRN 214
+ H+ + + + +G S+S D + +WD+ TG ++ GHT VN RG
Sbjct: 106 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ 165
Query: 215 FV-SASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTE 273
V + S DG++KLW+ A + T + + ++ +N
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVT---------------------FNDT 204
Query: 274 GKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIV 333
+ +G I D+ K + + ++T ++ + YL + D T+
Sbjct: 205 SDQIISGGIDNDIKVWDLRQNK----LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 260
Query: 334 SWDTR 338
WD R
Sbjct: 261 VWDVR 265
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 55.5 bits (132), Expect = 2e-07
Identities = 53/215 (24%), Positives = 87/215 (39%), Gaps = 28/215 (13%)
Query: 150 VIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMV 209
V ++P AH I+ +F P+G S S D +KIW E +T +GH +N+F+
Sbjct: 99 VAEIPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDFVYE-KTLMGHRLGINEFSWS 157
Query: 210 DRGRNFVSASSDGSLKLWECSTSACVFTLNSNDG-INCISLANYQGNPATTSYNALDHSN 268
+ VS S D +K+++ S+ CV TL + + C
Sbjct: 158 SDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCC-------------------- 197
Query: 269 EYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYS 328
+N G + +G I N I I P + ++S D YL +G
Sbjct: 198 -FNPSGTLIASGSFDETIRIWCARNGNTIFSI-PGHED---PVSSVCFNRDGAYLASGSY 252
Query: 329 DGTIVSWDTRNVSKPVETLQVNDNDSISRLFLAHN 363
DG + WD+ V+TL ++ I+ + + N
Sbjct: 253 DGIVRIWDS-TTGTCVKTLIDEEHPPITHVKFSPN 286
Score = 51.6 bits (122), Expect = 2e-06
Identities = 39/197 (19%), Positives = 81/197 (40%), Gaps = 22/197 (11%)
Query: 151 IKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVD 210
+K + H +++ F P+G S S D ++IW A G + + GH V+
Sbjct: 183 VKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNR 242
Query: 211 RGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEY 270
G S S DG +++W+ +T CV TL + +P T ++
Sbjct: 243 DGAYLASGSYDGIVRIWDSTTGTCVKTLIDEE------------HPPITHV-------KF 283
Query: 271 NTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDG 330
+ GK + A + + + D Y + ++L +++ + + ++ +G D
Sbjct: 284 SPNGKYILASNLNNTLKLWD-YQKLRVLKEYTGHENSKYCVAANFSVTGGKWIVSGSEDH 342
Query: 331 TIVSWD--TRNVSKPVE 345
+ W+ TR + + ++
Sbjct: 343 KVYIWNLQTREILQTLD 359
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 54.3 bits (129), Expect = 3e-07
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 92 SPKK--RFQLPSDIGAVDLTSIDITN-VFDP----EIRLVCGDTNGGIYVLRKNTGTNYS 144
+PKK + SD+ +D S D+ + D E++++ G + G +Y + ++
Sbjct: 500 TPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHS-GPVYGASFSPDRLWA 558
Query: 145 GPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVN 204
+ +++ H + + T+F PN + + S D +++WD G +R F GH ++
Sbjct: 559 TDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH 618
Query: 205 DFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINC 246
GR + ++DG + LW+ V L + C
Sbjct: 619 SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 660
>At3g16650 [A] KOG0285 Pleiotropic regulator 1
Length = 477
Score = 54.3 bits (129), Expect = 3e-07
Identities = 44/185 (23%), Positives = 68/185 (35%), Gaps = 27/185 (14%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRN 214
+ H + F P+ F + S D +KIWD +TG T GH V A+ +R
Sbjct: 165 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTY 224
Query: 215 FVSASSDGSLKLWECSTSACVFTLNSN-DGINCISLANYQGNPATTSYNALDHSNEYNTE 273
SA D +K W+ + + + + + G+ C++L + LD
Sbjct: 225 MFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLAL-----------HPTLD-------- 265
Query: 274 GKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIV 333
V G + DI + +I +LP L D + G D TI
Sbjct: 266 --VVLTGGRDSVCRVWDIRTKMQIF-VLPHDSDVFSVLARP----TDPQVITGSHDSTIK 318
Query: 334 SWDTR 338
WD R
Sbjct: 319 FWDLR 323
>Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 508
Score = 53.9 bits (128), Expect = 4e-07
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 39/193 (20%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSA 233
+S+S D +K+W ST +RT GH R + + R R VS SSD +++LW+ A
Sbjct: 343 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGA 400
Query: 234 CVFTLNSNDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIY 292
C+ L ++ + CI N K + +G G I D+
Sbjct: 401 CLRVLEGHEELVRCIRFDN-----------------------KRIVSGAYDGKIKVWDL- 436
Query: 293 NRKKILDILPASKSACVTLTSQH------IAGDDHYLFAGYSDGTIVSWDTRNVSKPVET 346
+ LD + + C+ +H + D+ + + D TI+ WD NV +
Sbjct: 437 --QAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQ- 493
Query: 347 LQVNDNDSISRLF 359
N+ S SR +
Sbjct: 494 ---NETRSPSRTY 503
>Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 529
Score = 53.9 bits (128), Expect = 4e-07
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 39/193 (20%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSA 233
+S+S D +K+W ST +RT GH R + + R R VS SSD +++LW+ A
Sbjct: 364 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGA 421
Query: 234 CVFTLNSNDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIY 292
C+ L ++ + CI N K + +G G I D+
Sbjct: 422 CLRVLEGHEELVRCIRFDN-----------------------KRIVSGAYDGKIKVWDL- 457
Query: 293 NRKKILDILPASKSACVTLTSQH------IAGDDHYLFAGYSDGTIVSWDTRNVSKPVET 346
+ LD + + C+ +H + D+ + + D TI+ WD NV +
Sbjct: 458 --QAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQ- 514
Query: 347 LQVNDNDSISRLF 359
N+ S SR +
Sbjct: 515 ---NETRSPSRTY 524
>Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 542
Score = 53.9 bits (128), Expect = 4e-07
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 39/193 (20%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSA 233
+S+S D +K+W ST +RT GH R + + R R VS SSD +++LW+ A
Sbjct: 377 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGA 434
Query: 234 CVFTLNSNDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIY 292
C+ L ++ + CI N K + +G G I D+
Sbjct: 435 CLRVLEGHEELVRCIRFDN-----------------------KRIVSGAYDGKIKVWDL- 470
Query: 293 NRKKILDILPASKSACVTLTSQH------IAGDDHYLFAGYSDGTIVSWDTRNVSKPVET 346
+ LD + + C+ +H + D+ + + D TI+ WD NV +
Sbjct: 471 --QAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQ- 527
Query: 347 LQVNDNDSISRLF 359
N+ S SR +
Sbjct: 528 ---NETRSPSRTY 537
>ECU08g1250 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 759
Score = 53.9 bits (128), Expect = 4e-07
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 143 YSGPLQEVIKLPEAHASHITKTQFFPNGHG-FLSSSIDMRLKIWDASTGTELRTFIGHTR 201
Y G + + + H + F+PN F+S S+D +K+W ++TF GHT
Sbjct: 164 YQGEVSQAMTYT-GHEHFVMDVCFYPNDASKFVSCSLDSTVKVWSVEQPHCVKTFKGHTS 222
Query: 202 SVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSN 241
+N + R VS + D +LK+W+ T+ C+ TL+ +
Sbjct: 223 GINSICFLGRD-CLVSGADDLTLKVWDFQTAQCITTLSGH 261
>At5g50230 [R] KOG0288 WD40 repeat protein TipD
Length = 515
Score = 53.9 bits (128), Expect = 4e-07
Identities = 58/245 (23%), Positives = 103/245 (41%), Gaps = 47/245 (19%)
Query: 131 GIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGH-----------GFLSSSID 179
G V N+GT ++G +K+ + ++ + K+ + G+ ++++
Sbjct: 235 GSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSS 294
Query: 180 MRLKIWDASTGTELRTFIGHTRSVNDFAMVD----RGRNFVSASSDGSLKLWECSTSAC- 234
L +WD S+G T GHT V VD R+ VSA+ D ++KLW+ C
Sbjct: 295 NNLFVWDVSSGRVRHTLTGHTDKV---CAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCT 351
Query: 235 ---VFTLNSN------DGINCISLANYQGN------------PATTSYNALDHSNEYNTE 273
+FT N N DG+ S + GN +++ S +
Sbjct: 352 NTVLFTSNCNAICLSIDGLTVFS-GHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRN 410
Query: 274 GKAVFAGHDSGIITFHDIYNRK--KILDILPASKSACVTLTSQH-IAGDDHYLFAGYSDG 330
G + SG H++++ + +I L AS + + S+ I+ DD Y+ AG +DG
Sbjct: 411 GNRILT---SGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADG 467
Query: 331 TIVSW 335
++ W
Sbjct: 468 SVHVW 472
>At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 921
Score = 53.9 bits (128), Expect = 4e-07
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 143 YSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTE-LRTFIGHTR 201
Y+ + +K+ EAH+ +I P LSSS DM +K+WD G + F GH+
Sbjct: 87 YNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSH 146
Query: 202 SVNDFAMVDRGRN-FVSASSDGSLKLWECSTSACVFTLNSND-GINCI 247
V + N F SAS D ++K+W + FTL+++ G+NC+
Sbjct: 147 YVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 194
>At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 913
Score = 53.9 bits (128), Expect = 4e-07
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 143 YSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTG-TELRTFIGHTR 201
Y+ + IK+ EAHA +I P LSSS DM +K+WD G + F GH+
Sbjct: 77 YNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSH 136
Query: 202 SVNDFAMVDRGRN-FVSASSDGSLKLWECSTSACVFTLNSN-DGINCI 247
V + N F SAS D ++K+W + FTL+++ G+NC+
Sbjct: 137 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCV 184
>YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 640
Score = 53.5 bits (127), Expect = 6e-07
Identities = 27/66 (40%), Positives = 37/66 (55%), Gaps = 2/66 (3%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSA 233
LS +D +K+WD TG +RT GH V D A D R +S S DGS+K+W+ +
Sbjct: 526 LSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIA-ADNFR-IISGSHDGSIKVWDLQSGK 583
Query: 234 CVFTLN 239
C+ T N
Sbjct: 584 CMHTFN 589
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 53.5 bits (127), Expect = 6e-07
Identities = 27/75 (36%), Positives = 37/75 (49%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H + F P+G +S+S D +K+WD G + TF GH SV A R V
Sbjct: 401 HQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLV 460
Query: 217 SASSDGSLKLWECST 231
S S D +LK+W+ T
Sbjct: 461 SCSKDTTLKVWDVRT 475
>SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 642
Score = 53.5 bits (127), Expect = 6e-07
Identities = 41/180 (22%), Positives = 75/180 (40%), Gaps = 24/180 (13%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H + I QF P G+ F ++S D ++WD LR F+GH V+ +
Sbjct: 444 HNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLA 503
Query: 217 SASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKA 276
+ SSD + ++W+ T V N++ + +AL S +G +
Sbjct: 504 TGSSDHTTRMWDVRTGGTVRVFNAHH----------------SPVSALCMS----ADGLS 543
Query: 277 VFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWD 336
+ + +SGII D+ + + + + S + S + D+ L +G +D + WD
Sbjct: 544 LASADESGIIKVWDLRSSNQHVSFVKHSS----IVYSLSFSYDNKILVSGGADTDVNFWD 599
>Hs11055998 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 53.5 bits (127), Expect = 6e-07
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 27/183 (14%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H +++ +F + ++SS D +WD T + TF GH+ V ++ R FV
Sbjct: 142 HTGYLSCCRFLDDSQ-IVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFV 200
Query: 217 SASSDGSLKLWECSTSAC--VFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEG 274
S + D S KLW+ C FT + +D IN +S + G
Sbjct: 201 SGACDASSKLWDIRDGMCRQSFTGHVSD-INAVS---------------------FFPNG 238
Query: 275 KAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVS 334
A G D D+ +++L L + + +TS + L AGY D
Sbjct: 239 YAFATGSDDATCRLFDLRADQELL--LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNV 296
Query: 335 WDT 337
WDT
Sbjct: 297 WDT 299
>At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 926
Score = 53.5 bits (127), Expect = 6e-07
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 143 YSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTE-LRTFIGHTR 201
Y+ + +K+ EAH+ +I P LSSS DM +K+WD G + F GH+
Sbjct: 84 YNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSH 143
Query: 202 SVNDFAMVDRGRN-FVSASSDGSLKLWECSTSACVFTLNSND-GINCI 247
V + N F SAS D ++K+W + FTL+++ G+NC+
Sbjct: 144 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
>SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 854
Score = 53.1 bits (126), Expect = 8e-07
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 27/207 (13%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRN 214
++H ++ Q+ +G ++ + D ++K+WD ++G + TF HT +V+ RG
Sbjct: 336 QSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNV 395
Query: 215 FVSASSDGSLKLWEC--STSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNT 272
S+S DGS++ W+ + FT S +CI++ +
Sbjct: 396 LFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAV---------------------DP 434
Query: 273 EGKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTI 332
G+ V AG F ++L+ L A V+ S + +G L +G D T+
Sbjct: 435 SGEIVCAGSQDSFEIFMWSVQTGQLLETL-AGHEGPVSSLSFNSSGS--LLASGSWDKTV 491
Query: 333 VSWDTRNVSKPVETLQVNDNDSISRLF 359
WD + S VE L + +D +S F
Sbjct: 492 RIWDIFSRSGIVEPLPI-PSDVLSLAF 517
>Hs7657381 [R] KOG0289 mRNA splicing factor
Length = 504
Score = 53.1 bits (126), Expect = 8e-07
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRN 214
E +T QF P+G F + ++D ++KIWD T + F GH+ + A + G
Sbjct: 347 ETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYY 406
Query: 215 FVSASSDGSLKLWE 228
+A+ D S+KLW+
Sbjct: 407 LATAADDSSVKLWD 420
>CE28405 [S] KOG0282 mRNA splicing factor
Length = 567
Score = 53.1 bits (126), Expect = 8e-07
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 148 QEVIKLPEAHASHITKTQFFP-NGHGFLSSSIDMRLKIWDA-STGTELRTFIGHTRSVND 205
++++ H + Q+FP + H FLS S+D ++K+W+ +RT+ GH V +
Sbjct: 265 KKLVHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVRE 324
Query: 206 FAMVDRGRNFVSASSDGSLKLWECST 231
A + G F+SAS D +KLW+ T
Sbjct: 325 VAFNNEGTEFLSASFDRYVKLWDTET 350
Score = 51.6 bits (122), Expect = 2e-06
Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 44/275 (16%)
Query: 109 TSIDITNVFDPE--IRLVCGDTNGGIYVLRKNTGTNY-SGPLQEVIKLPEA--------- 156
T I + V+D + +R G V N GT + S +KL +
Sbjct: 298 TKIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRF 357
Query: 157 HASHITKT-QFFPN---GHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRG 212
H H+ ++ P+ H FL + ++ WD+ +G ++ + H ++VN D+
Sbjct: 358 HTGHVPYCLKYHPDDDKNHMFLVGMQNKKIIQWDSRSGEIVQEYDRHLQAVNSITFFDKN 417
Query: 213 RNFVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNT 272
R F S S D S+++WE L N G++ I P T N+
Sbjct: 418 RRFASTSDDKSVRIWEWEIPVDT-KLIQNVGLHAI--------PTMTK-----SPNDKWV 463
Query: 273 EGKAVFAGHDSGIITFHDI-----YNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGY 327
G+ + D+ I+ F + +++KK A+ AC + + D +L +G
Sbjct: 464 VGQCM----DNRIVLFQLVDDKLRFSKKKAFRGHNAAGYAC----NIDFSPDQSFLISGD 515
Query: 328 SDGTIVSWDTRNVSKPVETLQVNDNDSISRLFLAH 362
+DG + WD R K V + +D+ I+ L+ H
Sbjct: 516 ADGKLFIWDWR-THKIVGKWKAHDSTCIAALWHPH 549
>Hs13376840 [R] KOG4155 FOG: WD40 repeat
Length = 305
Score = 52.8 bits (125), Expect = 1e-06
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 75 YELTGPDATAGHLASFQSPKKRFQLPSDIGAVDLTSIDITNVFDPEIR-LVCGDTNGGIY 133
Y TG ++ +S KK + L D + SI + P+ + L G +G I
Sbjct: 120 YLATGTHVGKVNIFGVESGKKEYSL--DTRGKFILSI----AYSPDGKYLASGAIDGIIN 173
Query: 134 VLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTEL 193
+ TG +++ E HA I F P+ +++S D +KI+D
Sbjct: 174 IFDIATG--------KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 194 RTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFT 237
T GH V + A +FVS+SSD S+K+W+ T CV T
Sbjct: 226 GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT 269
Score = 51.2 bits (121), Expect = 3e-06
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 117 FDPEIRLVCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSS 176
F P+ +L+ ++ G + N +G L HAS + F P+ F+SS
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLS-------GHASWVLNVAFCPDDTHFVSS 250
Query: 177 SIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWEC 229
S D +K+WD T T + TF H V G VS D + +++C
Sbjct: 251 SSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 303
>CE18673 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 1000
Score = 52.8 bits (125), Expect = 1e-06
Identities = 31/96 (32%), Positives = 53/96 (54%), Gaps = 3/96 (3%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELR-TFIGHTRSVNDFAMVDRGR 213
EAH+ ++ P +SSS DM +K+WD ++ +F GHT V A+ +
Sbjct: 96 EAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDN 155
Query: 214 N-FVSASSDGSLKLWECSTSACVFTLNSND-GINCI 247
N F +AS D ++K+W+ ++ FTL ++ G+NC+
Sbjct: 156 NTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCV 191
>CE17845 [R] KOG0286 G-protein beta subunit
Length = 356
Score = 52.8 bits (125), Expect = 1e-06
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 24/183 (13%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSV--NDFAMVDRGRN 214
H S+++ F + + L+ S D IWD +G ++ F GHT V D D G
Sbjct: 155 HTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDVPKCDTGNT 214
Query: 215 FVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEG 274
F+SA +D +W+ + CV +++G+ A ++ ++ G
Sbjct: 215 FISAGADKHSLVWDIRSGQCV--------------QSFEGHEADI------NTVRFHPNG 254
Query: 275 KAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVS 334
A G D D+ +++ + +S + + LFAGY D +
Sbjct: 255 DAFATGSDDATCRLFDLRADRQV--CVYEKESILFPVNGVDFSLSGRILFAGYGDYRVGV 312
Query: 335 WDT 337
WD+
Sbjct: 313 WDS 315
>7303631 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 680
Score = 52.8 bits (125), Expect = 1e-06
Identities = 51/234 (21%), Positives = 99/234 (41%), Gaps = 22/234 (9%)
Query: 138 NTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFI 197
NT T+ S ++ I+ E H + NG +S+S D +K+W+A G + T
Sbjct: 56 NTRTDSS---EKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQKGFCMSTLR 112
Query: 198 GHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPA 257
H V A SA D ++ LW+ +T + N N ++ ++ G+
Sbjct: 113 THRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASN-----NTVTTSSLTGSKD 167
Query: 258 TTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIYNRKKILDILPASKSA-CVTLTSQHI 316
+ +S N G + +G I+ D + + + +++ C+ +
Sbjct: 168 SI------YSLAMNPSGTVIVSGSTENILRIWDPRTCMRRMKLRGHTENVRCLV-----V 216
Query: 317 AGDDHYLFAGYSDGTIVSWDTRNVSKPVETLQVNDNDSISRLFLAHNTLNVSSG 370
+ D + + +G SDGTI W+ + V+T+ V+ + + L ++ N + SG
Sbjct: 217 SPDGNQVVSGSSDGTIKVWNL-GQQRCVQTIHVH-KEGVWSLLMSENFQYIISG 268
>7290895 [R] KOG0286 G-protein beta subunit
Length = 358
Score = 52.8 bits (125), Expect = 1e-06
Identities = 43/183 (23%), Positives = 79/183 (42%), Gaps = 24/183 (13%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVN--DFAMVDRGRN 214
H S+++ + + L+ S D +WD +G L++F GH+ V D A + G
Sbjct: 157 HTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNT 216
Query: 215 FVSASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEG 274
FVS S D +W+ + V +++G+ + +S +++ G
Sbjct: 217 FVSGSCDRMAFIWDMRSGHVV--------------QSFEGHQSDV------NSVKFHPCG 256
Query: 275 KAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVS 334
A+ G D +D+ +++ + A +S + S + LFAGY+D T+
Sbjct: 257 DAIATGSDDSSCRLYDMRADREV--AVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNL 314
Query: 335 WDT 337
WDT
Sbjct: 315 WDT 317
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 52.4 bits (124), Expect = 1e-06
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H + F P+G ++S D +++WD TG L T GH +V A R V
Sbjct: 388 HQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLV 447
Query: 217 SASSDGSLKLWECSTSACVFTLNSND 242
S+S D +LK+W+ + F L ++
Sbjct: 448 SSSQDTTLKVWDVRSKKMKFDLPGHE 473
>SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 703
Score = 52.4 bits (124), Expect = 1e-06
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 169 NGHG--FLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKL 226
+G+G +S S D ++IW STG L GH+ + +S S D S+++
Sbjct: 514 SGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRV 573
Query: 227 WECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGII 286
W+ ST C + L +D ++L N N + +G I
Sbjct: 574 WDLSTGTCKYVLEGHDAF--VTLLNVFQN--------------------RLISGSADSTI 611
Query: 287 TFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDTR 338
D+ N K L +LP++ + S D+H + +G +DG++ WD R
Sbjct: 612 RIWDL-NTGKPLMVLPSNSGYISSFVS-----DEHKIISG-NDGSVKLWDVR 656
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 52.4 bits (124), Expect = 1e-06
Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTE-LRTFIGHTRSVNDFAMVDRGR 213
+ H I +QF +G S+ D ++ +W+ E GH ++ +
Sbjct: 33 QGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSS 92
Query: 214 NFVSASSDGSLKLWECSTSACVFTLNSN-DGINCISLANYQGN----PATTSYNALDHSN 268
+ VSA +D ++++W+ T +C+ S+ D +N + + N +G A+ + H
Sbjct: 93 HLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDV-NRRGPQMICSASDDGTVMVHDM 151
Query: 269 EYNTEGKAVFAGHDSGIITFHD---------IYNRKKILDILPASKSACV-----TLTSQ 314
K + +TF+D I N+ K+ D+L + T+TS
Sbjct: 152 RSKEAAKKFICKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTITSL 211
Query: 315 HIAGDDHYLFAGYSDGTIVSWDTR 338
++ + ++L + D +++SWD R
Sbjct: 212 SVSHNGNFLLSNSMDCSLMSWDIR 235
>CE02005 [R] KOG0288 WD40 repeat protein TipD
Length = 464
Score = 52.4 bits (124), Expect = 1e-06
Identities = 51/227 (22%), Positives = 98/227 (42%), Gaps = 28/227 (12%)
Query: 161 ITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASS 220
+ + + H L+SS D ++W+ + L TF GHT V+ A + + N +S S+
Sbjct: 223 VNRLDYDSQRHVCLASSNDKTCRLWNIDSQRLLSTFSGHTDKVSS-ARLFQSHNVISGSA 281
Query: 221 DGSLKLWECSTSAC---------VFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYN 271
D ++K W+ S+ C VF + + G++ S + + ++A Y+
Sbjct: 282 DRTIKNWDISSIRCLKSYLVGSTVFDIVAKCGVSQSSFISSHFDKKVRFWDARSSDATYS 341
Query: 272 TE-------------GKAVFAGHDSGIITFHDIYNRKKILDILPAS--KSACVTLTSQHI 316
E G V A ++ D+ N I+ + A K++C + T
Sbjct: 342 VELGQKVSSLDISMDGLQVLASSRDDTLSLIDVRN-YGIIHLYSAEQYKTSCDS-TRAIF 399
Query: 317 AGDDHYLFAGYSDGTIVSWDTRNVSKPVETLQVNDNDSISRLFLAHN 363
+ Y+ AG S+ ++ W+T+ +K + ++ +DS + LA N
Sbjct: 400 SSTGEYVLAGSSNSSVFIWNTK-TTKLEKVVKTARSDSAQIMSLAWN 445
>SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 340
Score = 52.0 bits (123), Expect = 2e-06
Identities = 45/190 (23%), Positives = 75/190 (38%), Gaps = 26/190 (13%)
Query: 161 ITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV-SAS 219
IT Q+ + SS D L WDA +G ++R GH VN ++ G + S S
Sbjct: 96 ITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVS 155
Query: 220 SDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKAVFA 279
D ++K+W+ + C+ T+ + +++A +G VF
Sbjct: 156 DDCTMKVWDSRSKDCIKTIEEKYPLTAVAIAQ---------------------QGTQVFI 194
Query: 280 GHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDTRN 339
G G I D+ N +L K +TS I+ D L + D T+ +D +
Sbjct: 195 GGIDGAIKIWDLRN-NHCSHVLKGHKD---IITSLAISKDGSSLLSNSMDNTVRIFDVKP 250
Query: 340 VSKPVETLQV 349
+ LQ+
Sbjct: 251 FASAQRQLQI 260
>SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein
Length = 314
Score = 52.0 bits (123), Expect = 2e-06
Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 22/196 (11%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H+ ++ + H LS+S D +++WD G F+GHT V ++ R V
Sbjct: 62 HSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVV 121
Query: 217 SASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKA 276
S S D ++K+W C +T+ + +S + NP ++
Sbjct: 122 SGSRDKTIKIWNI-IGNCKYTITDGGHSDWVSCVRFSPNPDNLTF--------------- 165
Query: 277 VFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWD 336
V AG D + + + + + +++ I+ D +G DGT++ WD
Sbjct: 166 VSAGWDKAVKVWD-----LETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
Query: 337 TRNVSKPVETLQVNDN 352
N S + +L+ N
Sbjct: 221 L-NESTHLYSLEAKAN 235
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 52.0 bits (123), Expect = 2e-06
Identities = 36/185 (19%), Positives = 71/185 (37%), Gaps = 26/185 (14%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRN 214
+ H+ + + + +G S+S D + +WD+ TG ++ GHT VN +
Sbjct: 106 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKSPQ 165
Query: 215 FV-SASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTE 273
V + S DG++KLW+ A + T + + ++ +N
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVT---------------------FNDT 204
Query: 274 GKAVFAGHDSGIITFHDIYNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIV 333
+ +G I D+ K + + ++T ++ + YL + D T+
Sbjct: 205 SDQIISGGIDNDIKVWDLRQNK----LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 260
Query: 334 SWDTR 338
WD R
Sbjct: 261 VWDVR 265
>CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 665
Score = 52.0 bits (123), Expect = 2e-06
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 35/170 (20%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSA 233
+S+S D +K+W T +RT GH R + + RGR VS SSD +++LW+ +
Sbjct: 359 VSASGDRTIKVWSMDTLEFVRTLAGHRRGIA--CLQYRGRLVVSGSSDNTIRLWDIHSGV 416
Query: 234 CVFTLNSNDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIY 292
C+ L ++ + CI + K + +G G I D+
Sbjct: 417 CLRVLEGHEELVRCIRF-----------------------DEKRIVSGAYDGKIKVWDL- 452
Query: 293 NRKKILDILPASKSACVTLTSQH------IAGDDHYLFAGYSDGTIVSWD 336
+ LD S C+ QH + DD + + D TI+ WD
Sbjct: 453 --QAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWD 500
>At2g32700 [R] KOG0266 WD40 repeat-containing protein
Length = 787
Score = 52.0 bits (123), Expect = 2e-06
Identities = 42/146 (28%), Positives = 60/146 (40%), Gaps = 17/146 (11%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDAS-TGTELRTFIGHTRSVNDFA 207
+V PE HA IT +F PN +SS D +KIWDAS G LRT GH V
Sbjct: 543 QVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSID 602
Query: 208 MVDRGRNFV-SASSDGSLKLWECSTSACVFTLNSNDGINCISLANYQGNPATTSYNALDH 266
+ + S S+ ++ W+ + S CV + + + P T + A
Sbjct: 603 FHPKKTELLCSCDSNNDIRFWDINAS-CVRAVKG-------ASTQVRFQPRTGQFLAAAS 654
Query: 267 SN-------EYNTEGKAVFAGHDSGI 285
N E N + +F GH S +
Sbjct: 655 ENTVSIFDIENNNKRVNIFKGHSSNV 680
>7302603 [R] KOG0289 mRNA splicing factor
Length = 505
Score = 52.0 bits (123), Expect = 2e-06
Identities = 24/83 (28%), Positives = 43/83 (50%)
Query: 161 ITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASS 220
+T QF P+G F + ++D ++KIWD + + F GHT ++ + + G +A+
Sbjct: 353 LTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAAD 412
Query: 221 DGSLKLWECSTSACVFTLNSNDG 243
D +KLW+ T+ +DG
Sbjct: 413 DACVKLWDLRKLKNFKTIQLDDG 435
>7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 510
Score = 52.0 bits (123), Expect = 2e-06
Identities = 44/173 (25%), Positives = 71/173 (40%), Gaps = 35/173 (20%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSA 233
+S+S D +K+W S+ +RT GH R + + R R VS SSD S++LW+ A
Sbjct: 347 VSASGDRTIKVWSTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNSIRLWDIECGA 404
Query: 234 CVFTLNSNDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIY 292
C+ L ++ + CI + K + +G G I D+
Sbjct: 405 CLRVLEGHEELVRCIRF-----------------------DTKRIVSGAYDGKIKVWDLV 441
Query: 293 NRKKILDILPASKSACVTLTSQH------IAGDDHYLFAGYSDGTIVSWDTRN 339
LD AS + C+ +H + D+ + + D TI+ WD N
Sbjct: 442 ---AALDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIVSSSHDDTILIWDFLN 491
>YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 923
Score = 51.6 bits (122), Expect = 2e-06
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 143 YSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRS 202
Y + I + H + P+G +++S D ++K+WD ++G L TF HT S
Sbjct: 330 YEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSS 389
Query: 203 VNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDGI--NCISL 249
V RG+ S+S DG+++ W+ T + I NC+++
Sbjct: 390 VTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAV 438
>Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 485
Score = 51.6 bits (122), Expect = 2e-06
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H + I + F P+ S+S D +K+WD TG L + GH +V A R V
Sbjct: 371 HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV 430
Query: 217 SASSDGSLKLWE 228
S SSD +LK+W+
Sbjct: 431 SGSSDSTLKVWD 442
>Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 51.6 bits (122), Expect = 2e-06
Identities = 26/73 (35%), Positives = 38/73 (51%)
Query: 156 AHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNF 215
AH + QF P H F ++ D ++K WDA ++T GH + + A+ G
Sbjct: 631 AHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYV 690
Query: 216 VSASSDGSLKLWE 228
VS+S D SL+LWE
Sbjct: 691 VSSSHDKSLRLWE 703
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 51.6 bits (122), Expect = 2e-06
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAM 208
++++ H S+ + +F P G S S D LKIWD ++T+ GH+R ++
Sbjct: 121 KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRF 180
Query: 209 VDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDG 243
GR VS D +K+W+ + + ++G
Sbjct: 181 TPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEG 215
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 51.6 bits (122), Expect = 2e-06
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 149 EVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAM 208
++++ H S+ + +F P G S S D L++WD ++T+ GHTR ++
Sbjct: 40 KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEF 99
Query: 209 VDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDG 243
GR VS D +K+W+ + + ++G
Sbjct: 100 SPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEG 134
>ECU08g1180 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 984
Score = 51.2 bits (121), Expect = 3e-06
Identities = 29/109 (26%), Positives = 48/109 (43%), Gaps = 5/109 (4%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H+ + + F F+S D +K+WD +G + +FIGH V+D + G+ V
Sbjct: 145 HSGQVDRICFDQGNRFFMSGGADGMVKLWDVHSGFLVHSFIGHRNLVSDLCVSSDGKVLV 204
Query: 217 SASSDGSLKLWECSTSACVFTLNSNDGINC-ISLANYQGNPATTSYNAL 264
S G L +W +F L G+ C I + T++YN +
Sbjct: 205 SCDIHGLLSIWSLEEFEILFQL----GLECEIIFTEFFDTNDTSAYNLI 249
>YNL006w [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 303
Score = 50.8 bits (120), Expect = 4e-06
Identities = 62/251 (24%), Positives = 103/251 (40%), Gaps = 12/251 (4%)
Query: 1 MRVEEWNICSEFDDILDDVRGEKVASDKIWVSRSSGEPLYDLEFDVRLDSRGNVGFHNAN 60
+R N + F+ +V D W+ SS + + +DVR S HNA
Sbjct: 60 IRTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKV-WDVRSPSIPRNYKHNAP 118
Query: 61 TSDKISFQRVRPHLYELTGPDATAGHLASFQSPKKRFQLPSDIGAVDLTSIDITNVFDPE 120
++ + + P+ EL D G++ + + Q + D TS+ ++
Sbjct: 119 VNEVV----IHPNQGELISCDRD-GNIRIWDLGEN--QCTHQLTPEDDTSLQSLSMASDG 171
Query: 121 IRLVCGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDM 180
L +T G YV T+ S L+ V K AH+++IT+ + + S D
Sbjct: 172 SMLAAANTKGNCYVWEMPNHTDASH-LKPVTKF-RAHSTYITRILLSSDVKHLATCSADH 229
Query: 181 RLKIWDASTGTELRTFI-GHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLN 239
++W +L T + GH R V D A V+ASSD ++LW+ ST V
Sbjct: 230 TARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLSTREIVRQYG 289
Query: 240 S-NDGINCISL 249
+ G C++L
Sbjct: 290 GHHKGAVCVAL 300
>SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 314
Score = 50.8 bits (120), Expect = 4e-06
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 123 LVCGDTNGGIYVLRKNTGTNYSGP--LQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDM 180
L+ G+ G YV R N+ G LQ V+K +AH +IT+ P+ + S D
Sbjct: 182 LIAGNNKGNCYVWRM---LNHQGASLLQPVVKF-QAHQRYITRCVLSPDVKHLATCSADA 237
Query: 181 RLKIWDASTGTEL--RTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTL 238
+ IW + + R GH R V D A V+ASSD +LWE S+ +
Sbjct: 238 TVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELSSGETIRQY 297
Query: 239 NS-NDGINCISLANYQ 253
+ + C++L +YQ
Sbjct: 298 SGHHKAAVCVALNDYQ 313
>CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 793
Score = 50.8 bits (120), Expect = 4e-06
Identities = 36/141 (25%), Positives = 61/141 (42%), Gaps = 21/141 (14%)
Query: 157 HASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFV 216
H + +F N H S S DM +KIW+ S + L+T GH+ +V +
Sbjct: 522 HRRGVGDVKFAKNSHKLASCSGDMTIKIWNISEKSCLQTISGHSCAVFRVIFARNDSQLI 581
Query: 217 SASSDGSLKLWECSTSACVFTLNSN-DGINCISLANYQGNPATTSYNALDHSNEYNTEGK 275
SA S G +K+W T+ C +++++ D I +S + + E +
Sbjct: 582 SADSAGIIKIWTIKTADCECSIDAHTDKIWSLS--------------------KNHNESE 621
Query: 276 AVFAGHDSGIITFHDIYNRKK 296
V AG D I+ + D+ K+
Sbjct: 622 FVTAGTDGRIVVWKDVTEEKQ 642
>SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 605
Score = 50.4 bits (119), Expect = 5e-06
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 40/192 (20%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMV-DRGRNFVSASSDGSLKLWECSTS 232
+S S D +K+W S G + T GHT VN ++ DRG +S S D ++K+W T+
Sbjct: 367 VSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGL-VLSGSDDSTIKIWSLETN 424
Query: 233 ACVFTLNSNDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDI 291
C+ T +++ G + ++LA+ +F+ G I DI
Sbjct: 425 TCLHTFSAHIGPVQSLALAD-----------------------SRLFSCSLDGTIKQWDI 461
Query: 292 YNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDT-------RNVSKPV 344
+K + + + IA D L +G DG + W+ +N S+PV
Sbjct: 462 EKKKCVHTLFGHIEGV------WEIAADHLRLISGAHDGVVKVWEACECVHTLKNHSEPV 515
Query: 345 ETLQVNDNDSIS 356
++ + D + +S
Sbjct: 516 TSVALGDCEVVS 527
>At5g49200 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 419
Score = 50.4 bits (119), Expect = 5e-06
Identities = 63/267 (23%), Positives = 111/267 (40%), Gaps = 39/267 (14%)
Query: 81 DATAGHLASFQSPKKRFQLPSDIGAVDL-TSIDI----------TNVFDPEIRLVCGDTN 129
DA AG L S + P LP+ I A ++ TS D+ N ++ T+
Sbjct: 172 DAEAGSLIS-EGPWVFLGLPNAIKAFNVQTSQDLHLQAAGVVGQVNAMTIANGMLFAGTS 230
Query: 130 GGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDAST 189
G ++ K T + S P + + L E H+ +T F G S S+D +K+WD +T
Sbjct: 231 SGSILVWKATTDSESDPFKYLTSL-EGHSGEVTC--FAVGGQMLYSGSVDKTIKMWDLNT 287
Query: 190 GTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSNDGINCISL 249
+ T HT +V D + +S+S DG++K+W S + + + +
Sbjct: 288 LQCIMTLKQHTGTVTSLLCWD--KCLISSSLDGTIKVWAYSENGILKVVQTR-------- 337
Query: 250 ANYQGNPATTSYNALDHSNEYNTEGK-AVFAGHDSGIITFHDIYNRKKILDILPASKSAC 308
+S +AL S ++ E K +F + +G + D+ + ++ + A
Sbjct: 338 -----RQEQSSVHAL--SGMHDAEAKPIIFCSYQNGTVGIFDLPSFQERGRMFSTHTIAT 390
Query: 309 VTLTSQHIAGDDHYLFAGYSDGTIVSW 335
+T+ G LF+G G + W
Sbjct: 391 LTI------GPQGLLFSGDESGNLRVW 411
>7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 436
Score = 50.4 bits (119), Expect = 5e-06
Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 27/236 (11%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSV--NDFAMVDRGRNFVSASSDGSLKLWECST 231
++ S D K+W A++G L TF GHT + +F VD G++ +AS DGS ++++ T
Sbjct: 167 VTGSFDGTAKVWSATSGQSLCTFYGHTAELVAAEFHPVD-GKSIATASLDGSARIYDVET 225
Query: 232 SACVFTLNSNDGINCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDI 291
S + L T + A + +N +G+ + G D+
Sbjct: 226 SHELQQL--------------------THHGAEVIAARFNRDGQMLLTGSFDHSAAIWDV 265
Query: 292 YNRKKILDILPASKSACVTLTSQHIAGDDHYLFAGYSDGTIVSWDTRNVSKPVETLQVND 351
R K L SA ++ + +G + G D T WDTR + + + +
Sbjct: 266 --RSKSLGHQLRGHSAELSNCVWNFSGS--LIATGSLDNTARIWDTRKLDQELYLAARHS 321
Query: 352 NDSISRLFLAHNTLNVSSGVQFAFNVPVLDGKFNFNKLTHLIRPYDEVTDFCVDES 407
++ + F A L + V L+G L+ + DEV+ C S
Sbjct: 322 DEVLDVSFDAAGQLLATCSSDCTARVWRLEGSSELEMLSLMAGHSDEVSKVCFSPS 377
>YDR364c [S] KOG0282 mRNA splicing factor
Length = 455
Score = 50.1 bits (118), Expect = 6e-06
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 148 QEVIKLPEAHASHITKTQFFPN-GHGFLSSSIDMRLKIWDASTGTE-LRTFIGHTRSVND 205
++VI+ H T +F P GH LS D +KIWD E LR F GH + +
Sbjct: 152 KKVIRNYPGHPEGTTALKFLPKTGHLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKA 211
Query: 206 FAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNSN 241
+ ++F+S+S D S+K+W+ T L+ N
Sbjct: 212 LRFTEDCQSFLSSSFDRSVKIWDTETGKVKTRLHLN 247
>Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 569
Score = 50.1 bits (118), Expect = 6e-06
Identities = 43/173 (24%), Positives = 71/173 (40%), Gaps = 35/173 (20%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSA 233
+S+S D +K+W+ ST +RT GH R + + R R VS SSD +++LW+ A
Sbjct: 404 VSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGA 461
Query: 234 CVFTLNSNDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIY 292
C+ L ++ + CI N K + +G G I D+
Sbjct: 462 CLRVLEGHEELVRCIRFDN-----------------------KRIVSGAYDGKIKVWDLV 498
Query: 293 NRKKILDILPASKSACVTLTSQH------IAGDDHYLFAGYSDGTIVSWDTRN 339
LD + + C+ +H + D+ + + D TI+ WD N
Sbjct: 499 ---AALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLN 548
>Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 605
Score = 50.1 bits (118), Expect = 6e-06
Identities = 43/173 (24%), Positives = 71/173 (40%), Gaps = 35/173 (20%)
Query: 174 LSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECSTSA 233
+S+S D +K+W+ ST +RT GH R + + R R VS SSD +++LW+ A
Sbjct: 440 VSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGA 497
Query: 234 CVFTLNSNDG-INCISLANYQGNPATTSYNALDHSNEYNTEGKAVFAGHDSGIITFHDIY 292
C+ L ++ + CI N K + +G G I D+
Sbjct: 498 CLRVLEGHEELVRCIRFDN-----------------------KRIVSGAYDGKIKVWDLV 534
Query: 293 NRKKILDILPASKSACVTLTSQH------IAGDDHYLFAGYSDGTIVSWDTRN 339
LD + + C+ +H + D+ + + D TI+ WD N
Sbjct: 535 ---AALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLN 584
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 50.1 bits (118), Expect = 6e-06
Identities = 39/139 (28%), Positives = 64/139 (45%), Gaps = 18/139 (12%)
Query: 116 VFDPEIRLVCG---DTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHG 172
+F+ E +VC DT+ ++ + G QE + L + H S + Q G+
Sbjct: 423 LFESERSIVCSGSLDTSIRVWDFTRPEG-------QECVALLQGHTSLTSGMQL--RGNI 473
Query: 173 FLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASS-DGSLKLWECST 231
+S + D +++WD GT + GH ++ GRN V+ SS DG++KLW+
Sbjct: 474 LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNMVATSSDDGTVKLWDIER 531
Query: 232 SACV---FTLNSNDGINCI 247
A + TL+S CI
Sbjct: 532 GALIRDLVTLDSGGNGGCI 550
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 50.1 bits (118), Expect = 6e-06
Identities = 39/139 (28%), Positives = 64/139 (45%), Gaps = 18/139 (12%)
Query: 116 VFDPEIRLVCG---DTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHG 172
+F+ E +VC DT+ ++ + G QE + L + H S + Q G+
Sbjct: 425 LFESERSIVCSGSLDTSIRVWDFTRPEG-------QECVALLQGHTSLTSGMQL--RGNI 475
Query: 173 FLSSSIDMRLKIWDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASS-DGSLKLWECST 231
+S + D +++WD GT + GH ++ GRN V+ SS DG++KLW+
Sbjct: 476 LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNMVATSSDDGTVKLWDIER 533
Query: 232 SACV---FTLNSNDGINCI 247
A + TL+S CI
Sbjct: 534 GALIRDLVTLDSGGNGGCI 552
>7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 787
Score = 50.1 bits (118), Expect = 6e-06
Identities = 48/173 (27%), Positives = 77/173 (43%), Gaps = 26/173 (15%)
Query: 144 SGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKIWDASTGTELRTFIGHTRSV 203
S LQ V++ H + +F P L+SS D L+IW S + ++ F ++
Sbjct: 509 SNTLQGVLR---GHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSISNFSCIKRF-DQECTI 564
Query: 204 NDFAMVDRGRNFVSASSDGSLKLWECSTSACVFTLNS-NDGINCISLANYQGNPATTSYN 262
+D G+ +SA+SDG LKLW T+ C+ +L+ ND + ++++
Sbjct: 565 LRAEFLDHGKFIISAASDGLLKLWNIKTNTCLQSLDEHNDRVWALAVS------------ 612
Query: 263 ALDHSNEYNTEGKAVFAGHDSGIITFHDI--YNRKKILDILPASKSACVTLTS 313
SN + G G DS +I F D+ R + LD A+ TL S
Sbjct: 613 --ARSNRFFYTG-----GADSKLIRFGDVTQVTRNEALDKRQAALEQEQTLHS 658
>7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 860
Score = 50.1 bits (118), Expect = 6e-06
Identities = 31/96 (32%), Positives = 49/96 (50%), Gaps = 3/96 (3%)
Query: 155 EAHASHITKTQFFPNGHGFLSSSIDMRLKIWD-ASTGTELRTFIGHTRSVNDFAMVDRGR 213
EAH+ ++ P L+SS DM +K+W+ R F GHT V +
Sbjct: 67 EAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDN 126
Query: 214 N-FVSASSDGSLKLWECSTSACVFTLNSND-GINCI 247
N F SAS D ++K+W+ ++ FTL ++ G+NC+
Sbjct: 127 NTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCV 162
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 49.7 bits (117), Expect = 8e-06
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 125 CGDTNGGIYVLRKNTGTNYSGPLQEVIKLPEAHASHITKTQFFPNGHGFLSSSIDMRLKI 184
C D N +Y+ R N + ++ H + + ++ P+ S+S D +++
Sbjct: 344 CSDDNT-LYLWRNNQN--------KCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRL 394
Query: 185 WDASTGTELRTFIGHTRSVNDFAMVDRGRNFVSASSDGSLKLWECST 231
W AS G + TF GH ++V A R VS S D +LK+W T
Sbjct: 395 WRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQT 441
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,692,316
Number of Sequences: 60738
Number of extensions: 1223072
Number of successful extensions: 5740
Number of sequences better than 1.0e-05: 114
Number of HSP's better than 0.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 4956
Number of HSP's gapped (non-prelim): 510
length of query: 423
length of database: 30,389,216
effective HSP length: 109
effective length of query: 314
effective length of database: 23,768,774
effective search space: 7463395036
effective search space used: 7463395036
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)