ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI2383.1 suspect: Pn IT KOG3668 Lipid transport and metabolism Phosphatidylinositol transfer protein
r_klactI2383.1 suspect: Pn IT KOG3668 Signal transduction mechanisms Phosphatidylinositol transfer protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI2383.1 805398 804739 -220
(220 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores:
Score E
Sequences producing significant alignments: (bits) Value
Hs20553175 [IT] KOG3668 Phosphatidylinositol transfer protein 28 7.6
CE18065 [IT] KOG3668 Phosphatidylinositol transfer protein 28 9.9
7292924 [IT] KOG3668 Phosphatidylinositol transfer protein 28 9.9
>Hs20553175 [IT] KOG3668 Phosphatidylinositol transfer protein
Length = 1349
Score = 28.5 bits (62), Expect = 7.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 168 WNWQDEWLGLSTGQVSQM 185
W WQDEW GLS + ++
Sbjct: 228 WCWQDEWYGLSMENIREL 245
>CE18065 [IT] KOG3668 Phosphatidylinositol transfer protein
Length = 980
Score = 28.1 bits (61), Expect = 9.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 168 WNWQDEWLGLSTGQVSQM 185
W WQDEW GL+ + ++
Sbjct: 228 WAWQDEWTGLTMNDIRKL 245
>7292924 [IT] KOG3668 Phosphatidylinositol transfer protein
Length = 1250
Score = 28.1 bits (61), Expect = 9.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 168 WNWQDEWLGLSTGQVSQM 185
W WQDEW GL+ + ++
Sbjct: 238 WAWQDEWFGLTIEDIREL 255
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.132 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,980,942
Number of Sequences: 60738
Number of extensions: 297668
Number of successful extensions: 537
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 534
Number of HSP's gapped (non-prelim): 3
length of query: 220
length of database: 30,389,216
effective HSP length: 102
effective length of query: 118
effective length of database: 24,193,940
effective search space: 2854884920
effective search space used: 2854884920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)