ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI2473 good MO KOG2407 Cell wall/membrane/envelope biogenesis GPI transamidase complex, GPI16/PIG-T component, involved in glycosylphosphatidylinositol anchor biosynthesis
r_klactI2473 good MO KOG2407 Posttranslational modification, protein turnover, chaperones GPI transamidase complex, GPI16/PIG-T component, involved in glycosylphosphatidylinositol anchor biosynthesis
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI2473 835386 833458 -643
(643 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHR188c [MO] KOG2407 GPI transamidase complex GPI16/PIG-T compon... 623 e-178
SPBC1604.15 [MO] KOG2407 GPI transamidase complex GPI16/PIG-T co... 274 3e-73
Hs7706258 [MO] KOG2407 GPI transamidase complex GPI16/PIG-T comp... 243 9e-64
At3g07140 [MO] KOG2407 GPI transamidase complex GPI16/PIG-T comp... 220 5e-57
7290926 [MO] KOG2407 GPI transamidase complex GPI16/PIG-T compon... 206 1e-52
CE05654 [MO] KOG2407 GPI transamidase complex GPI16/PIG-T compon... 152 2e-36
>YHR188c [MO] KOG2407 GPI transamidase complex GPI16/PIG-T component
involved in glycosylphosphatidylinositol anchor
biosynthesis
Length = 610
Score = 623 bits (1607), Expect = e-178
Identities = 308/579 (53%), Positives = 407/579 (70%), Gaps = 14/579 (2%)
Query: 60 LSLEHPIEYNFREHLDLTPLPNNFLLASFQFYMQSEPFGIDRDQHESSEYSHHTVFPKPV 119
+ + + Y + E L L PLPNN LL SF F +QSEPF Y H+T FP+ +
Sbjct: 26 IGINDSLWYPYDEALVLKPLPNNDLLLSFAFQLQSEPFDPAVSSMSYDAYEHYTTFPRAI 85
Query: 120 GPIMSQTNTRQLHLRFTHGLWDSQEWGQLPHNGLKSGGTGVELWAIVEAPSKEEALKSWI 179
P++ T TRQ HLRFT G WD+ WGQLPH G ++G +GVELW+ V+A +E+A +W
Sbjct: 86 PPLLESTATRQFHLRFTRGFWDALSWGQLPHAGKEAGASGVELWSQVQAMDQEQAFHNWK 145
Query: 180 TLANSLSGLFCASINFIDTSKTTFPVSSFLPKEDEAIPLLNQSNHLYLMRATLANEPVCT 239
L+NSLSGLFC+S+NFID S+TTFP S+ D PL N + LYLMRA+L NEP+CT
Sbjct: 146 KLSNSLSGLFCSSLNFIDESRTTFPRRSY--ASDIGAPLFNSTEKLYLMRASLPNEPICT 203
Query: 240 ENLTPFVKLLPTRGKSGISSLLDGHKIFDSNWHSLSIDVNTVCDE-STANCHFVMEEFIE 298
ENLTPF+KLLPTRGKSG++SLLDGHK+FDS W+S+S+D+ T+C E A CH+ M+ IE
Sbjct: 204 ENLTPFIKLLPTRGKSGLTSLLDGHKLFDSLWNSISLDIATICSEDEDALCHYEMDARIE 263
Query: 299 TVVNVPNALARADRPIPKPLPGDELRCDTNRPHDAFQCFPLPQSKEVSFSISKLFGKKIR 358
V +VP+ALAR +RPIPKPL G+ LRCDT++P D++QCFPLP+ + F +S+LF + I
Sbjct: 264 MVTHVPSALARGERPIPKPLDGNTLRCDTDKPFDSYQCFPLPEPSQTHFKLSQLFARPIN 323
Query: 359 GGSLLGEQSSKICVHVP-SHWDVMIQVDESYFATDDNCFDLNNNK-----PHDVRLETTD 412
G+L + ++IC V S W + VD++ F+T DNCFDL+N++ +D LE+TD
Sbjct: 324 NGNLFANRPTRICAEVDRSTWTAFLSVDDTIFSTHDNCFDLSNDQNEGGSGYDFILESTD 383
Query: 413 SKSVLPSKKTPIYVSRALTGYGQDRGGLRSVFRNPSNEAVELVYFESLPWFMGVYLSSLA 472
+ V P PI+VSR+LTG GQDRGG+R VF N ++ V+L+YFESLPWFM VYLSSL
Sbjct: 384 TTKVTPIVPVPIHVSRSLTGNGQDRGGMRIVFHNDNDTPVKLIYFESLPWFMRVYLSSLQ 443
Query: 473 IES-DDPELTLDSVVKSTFYSPARDRERPTHLERAMIIPPNTAFAISFQFDKSLLKYAEY 531
I S P+L + ++ +Y A DR+RP HLE M+IP NT +++QFDK+LL++AEY
Sbjct: 444 ITSTTSPQLQENDIILDKYYLQAADRKRPGHLEFTMLIPANTDIVMTYQFDKALLQFAEY 503
Query: 532 PPDANHGFEIEAAVAAVLTPER----YEARTXXXXXXXXTPDFSMPYNVIILTSTVMGLA 587
PPDANHGFEI+AAV VL+ E YE RT TPDFSMPYNVIILTST+MGL
Sbjct: 504 PPDANHGFEIDAAVITVLSLESSSSLYEMRTSTLLLSLSTPDFSMPYNVIILTSTIMGLI 563
Query: 588 FGTLFNLISKQLITLEEADKILASTGPRAKLLRVKAKIV 626
FG L+NL+ K+++T+EEADKI +G + KLL++K K +
Sbjct: 564 FGMLYNLMVKRMVTVEEADKITLQSGLKYKLLKLKEKFL 602
>SPBC1604.15 [MO] KOG2407 GPI transamidase complex GPI16/PIG-T component
involved in glycosylphosphatidylinositol anchor
biosynthesis
Length = 545
Score = 274 bits (700), Expect = 3e-73
Identities = 185/571 (32%), Positives = 280/571 (48%), Gaps = 54/571 (9%)
Query: 66 IEYNFREHLDLTPLPNNFLLASFQFYMQSEPFGIDRDQHESSEYSHHT--VFPKPVGPIM 123
I+ + E L + + + SF F + G D SS +S + +FP + +M
Sbjct: 24 IDETYDESLFIKSFSSRYSYVSFAFEI-----GASTDSTHSSVFSESSFSLFPLSIARVM 78
Query: 124 SQTNTRQLHLRFTHGLWDSQEWGQLPHNGLKSGGTGVELWAIVEAPSKEEALKSWITLAN 183
+ +LH+R T G WD + W + P NG SGG G E+WA + + + ++K W+ L N
Sbjct: 79 DECQVSELHIRATRGRWDYENWKESPDNGFYSGGLGFEVWAFM---ANDPSMKYWLKLTN 135
Query: 184 SLSGLFCASINFIDTSKTTFPVSSFLPKEDEAIPLLNQSNHLYLMRATLANEPVCTENLT 243
LSGL CAS+N+ID+S T P S+ + N + + A+L E VCTENL+
Sbjct: 136 QLSGLLCASLNYIDSSNTYQPQLSY----PGSFSFSNNTQYF----ASLPQEDVCTENLS 187
Query: 244 PFVKLLPTRGKSGISSLLDGHKIFDSNWHSLSIDVNTVCDESTANCHFVMEEFIETVVNV 303
P KLLP + K+GI+SLLD H FD++WHS SIDV ++S A+ M I+ VV+V
Sbjct: 188 PLFKLLPCKRKAGIASLLDSHLFFDTDWHSFSIDVYPSENQSLASVK--MGIIIQAVVDV 245
Query: 304 PNALARADRPIPKPLPGDELRCDTNRPHDAFQCFPLPQSKEVSFSISKLFGKKIRGGSLL 363
R + +P P + + D+ C S E ++ LF K + LL
Sbjct: 246 ERNGRRKGKTTFQP-PSEYCH---DEDMDSLHCLMSGYSTE-HHTVDDLFHKVPKERCLL 300
Query: 364 GEQSSKICVHVPSHWDVMIQVDESYFATDDNCFDLNNNKPHDVRLETTDSKSVLPSKKTP 423
S + V S+ D + + F L+ + +++T S
Sbjct: 301 SSTFSDVFV---SNGDKI------------DTFSLDEAANIQIPIQST-------SDNHT 338
Query: 424 IYVSRALTGYGQDRGGLRSVFRNPSNEAVELVYFESLPWFMGVYLSSLAIESDDPELTLD 483
+ V R+L+ G G L S NPS+ +VYFE PWF+ VYL +L I + +
Sbjct: 339 VTVDRSLSNDGNHWGSLSSTIYNPSSSPRTIVYFEKFPWFVRVYLHTLTITLNGTRINTK 398
Query: 484 SVVKSTFYSPARDRERPTHLERAMIIPPNTAFAISFQFDKSLLKYAEYPPDANHGFEIEA 543
++ +Y P RDR+ T +E IPP+T + F +K+ L+ EYPPDAN G+ +
Sbjct: 399 DFIEKLYYQPLRDRKAGTMMEIQFSIPPHTNLIVHFNVEKTPLRLDEYPPDANRGYNLPP 458
Query: 544 AVAAVLTPERYE---ARTXXXXXXXXTPDFSMPYNVIILTSTVMGLAFGTLFNLISKQLI 600
A+ +V + RT TPDFSMPYNVII TSTV+ L FG +FNL++++ +
Sbjct: 459 AIISVFDENNTKLCSLRTAALLMFIPTPDFSMPYNVIIFTSTVIALTFGGIFNLLTRRFV 518
Query: 601 TLEEADKILASTGPRAKLLRVKAKIVNMLQG 631
+ + L R+K KI + +G
Sbjct: 519 PQQSK----FQNRQPSMLQRLKEKIFHKKRG 545
>Hs7706258 [MO] KOG2407 GPI transamidase complex GPI16/PIG-T component
involved in glycosylphosphatidylinositol anchor
biosynthesis
Length = 574
Score = 243 bits (619), Expect = 9e-64
Identities = 170/579 (29%), Positives = 280/579 (47%), Gaps = 108/579 (18%)
Query: 69 NFREHLDLTPLPNNFLLASFQFYMQSEPFGIDRDQHESSEYSHHTVFPKPVGPIMSQTNT 128
+ RE L +TPLP+ + A+FQF + + + + SH+ +FPK +G ++S+ +
Sbjct: 25 HLREELVITPLPSGDVAATFQFRTRWD------SELQREGVSHYRLFPKALGQLISKYSL 78
Query: 129 RQLHLRFTHGLWDSQEWGQLPHNGLKSGGTGVELWAIVEAPSKEEALKSWITLANSLSGL 188
R+LHL FT G W ++ WG +G ELW + + + KSW L+N LSG+
Sbjct: 79 RELHLSFTQGFWRTRYWGP----PFLQAPSGAELWVWFQ-DTVTDVDKSWKELSNVLSGI 133
Query: 189 FCASINFIDTSKTTFPVSSFLPKEDEAIPLLNQSNHLYLMRATLANEPVCTENLTPFVKL 248
FCAS+NFID++ T P +SF P + L N ++H +L A L E VCTENLTP+ KL
Sbjct: 134 FCASLNFIDSTNTVTPTASFKP-----LGLANDTDHYFLRYAVLPREVVCTENLTPWKKL 188
Query: 249 LPTRGKSGISSLLDGHKIFDSNWHSLSIDVNTVCDESTANCHFVMEEFIETVVNVPNALA 308
LP K+G+S LL ++F +++HS ++ + VC A C + E +T+ V
Sbjct: 189 LPCSSKAGLSVLLKADRLFHTSYHSQAVHIRPVC--RNARCTSISWELRQTLSVV----- 241
Query: 309 RADRPIPKPLPGDELRCDTNRPHDAFQCFPLPQSKEVSFSISKLFGKKIRGGSLLGEQS- 367
F F Q K+ +S+ ++F + + L +S
Sbjct: 242 -------------------------FDAFITGQGKK-DWSLFRMFSRTLTEPCPLASESR 275
Query: 368 ------------SKICVHVP---SHWDVMIQVDESYFATD--DNCFDLNNNKPHDVRLET 410
+ VH P ++ DV++ ++Y D D +NN++ +++L+
Sbjct: 276 VYVDITTYNQDNETLEVHPPPTTTYQDVILGTRKTYAIYDLLDTAM-INNSRNLNIQLKW 334
Query: 411 TDSKSVLPSKKTP----IYVSRALTGYGQDRGGLRSVFRNP-SNEAVELVYFESLPWFMG 465
P + P ++ R ++GYG +G L ++ N A ++ +++PW++
Sbjct: 335 KRP----PENEAPPVPFLHAQRYVSGYGLQKGELSTLLYNTHPYRAFPVLLLDTVPWYLR 390
Query: 466 VYLSSLAIESDDPELTLDSVVKSTFYSPARDRERPTHLERAMIIPPNTAFAISFQFDKSL 525
+Y+ +L I S E + Y PA+DR +P LE + +P N+ +S QF+++L
Sbjct: 391 LYVHTLTITSKGKE----NKPSYIHYQPAQDRLQPHLLEMLIQLPANSVTKVSIQFERAL 446
Query: 526 LKYAEYPPDANHGFEIEAAVAAVLTPERYEAR---------------------------T 558
LK+ EY PD NHGF + +V + L P A+ T
Sbjct: 447 LKWTEYTPDPNHGFYVSPSVLSALVPSMVAAKPVDWEESPLFNSLFPVSDGSNYFVRLYT 506
Query: 559 XXXXXXXXTPDFSMPYNVIILTSTVMGLAFGTLFNLISK 597
TPDFSMPYNVI LT TV+ + +G+ +NL+++
Sbjct: 507 EPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTR 545
>At3g07140 [MO] KOG2407 GPI transamidase complex GPI16/PIG-T component
involved in glycosylphosphatidylinositol anchor
biosynthesis
Length = 639
Score = 220 bits (561), Expect = 5e-57
Identities = 173/625 (27%), Positives = 290/625 (45%), Gaps = 128/625 (20%)
Query: 70 FREHLDLTPLPNNFLLASFQFYMQSEPFGIDRDQHESSEYSHHTVFPKPVGPIMSQTNTR 129
F E L L PLP+ +LA F F ++ P +S HH +FPK + ++ + +
Sbjct: 31 FSEALLLKPLPDRKVLAHFHFENRAPP--------SNSHGRHHHLFPKAISQLVQKFRVK 82
Query: 130 QLHLRFTHGLWDSQEWGQL-PHNGLKSGGTGVELWAIVEAPSKEEALKSWITLANSLSGL 188
++ L FT G W+ + WG P + + + GVELWA+ + P + + SW L ++LSGL
Sbjct: 83 EMELSFTQGRWNHEHWGGFDPLSSMNAKPVGVELWAVFDVP-QSQVDTSWKNLTHALSGL 141
Query: 189 FCASINFIDTSKT-TFPVSSFLPKEDEAIPLLNQSNHLYLMRATLANEPVCTENLTPFVK 247
FCASINF+++S + P F P D+ L +L E VCTENLTP++K
Sbjct: 142 FCASINFLESSTSYAAPTWGFGPNSDK------------LRYGSLPREAVCTENLTPWLK 189
Query: 248 LLPTRGKSGISSLLDGHKIFDSNWHSLSIDVNTV-CDESTANCHFVMEEFIETVVNVPNA 306
LLP R K GIS+L++ ++ +HS + ++TV + V+E+ + TVV P
Sbjct: 190 LLPCRDKDGISALMNRPSVYRGFYHSQRLHLSTVESGQEGLGSGIVLEQTL-TVVLQPET 248
Query: 307 LARADRPIPKPLPGDELRCDTNRPHDAFQCFPLPQSKEVSFSISKLFGKKIRG------- 359
+ + + + S+S+S LFG+++ G
Sbjct: 249 TS------------------------------VESNMQPSWSLSSLFGRQVVGRCVLAKS 278
Query: 360 -------GSLLGEQSSKICVHVPSH-------WDVMIQVDESYFATDDNC-----FDL-- 398
LLG +S + + +H +++ ++ + ++C FD+
Sbjct: 279 SNVYLQLEGLLGYESKNVDTEIEAHQLWKNAEFELSLKPER---VIRESCSFLFIFDIDK 335
Query: 399 -NNNKPHDVRLETTDSKSVLPSKKTPIYVSRALTGYGQDRGGLRSVFRNPSNE------- 450
++++P D+ L T S ++ P++ SR L G G +RG + + + ++
Sbjct: 336 SSDSEPFDLGL-TWKRPSKWSCQQAPLHSSRFLMGSGNERGAIAILLKATESQEKLSGRD 394
Query: 451 ------AVELVYFESLPWFMGVYLSSLAIESDDPELTLDSVVKSTFYSPARDRERPTHLE 504
++ F+ PW++ VY +L I D + T V+K SP+ D+ +E
Sbjct: 395 LTNGQCTIKANIFQIFPWYIKVYYHTLQIFVDQQQKTDSEVLKKINVSPSTDKVSSGMME 454
Query: 505 RAMIIPPNT-AFAISFQFDKSLLKYAEYPPDANHGFEIEAA------------------- 544
+ +P + AIS ++DK L EYPPDAN GF+I +A
Sbjct: 455 MMLELPCEVKSVAISIEYDKGFLHIDEYPPDANQGFDIPSALISFPDHHASLDFQEELSN 514
Query: 545 ---VAAVLTPERYEARTXXXXXXXXTPDFSMPYNVIILTSTVMGLAFGTLFNLISKQLIT 601
++++ + T TPDFSMPYNVI +T T+ L FG+L N++ ++
Sbjct: 515 SPLLSSLKEKSLVRSYTEVLLVPLTTPDFSMPYNVITITCTIFALYFGSLLNVLRRR--- 571
Query: 602 LEEADKILASTGPRAKLL-RVKAKI 625
+ E ++ L S G +LL R+ AKI
Sbjct: 572 IGEEERFLKSQGGLKQLLSRITAKI 596
>7290926 [MO] KOG2407 GPI transamidase complex GPI16/PIG-T component
involved in glycosylphosphatidylinositol anchor
biosynthesis
Length = 633
Score = 206 bits (523), Expect = 1e-52
Identities = 169/586 (28%), Positives = 252/586 (42%), Gaps = 111/586 (18%)
Query: 70 FREHLDLTPLPNNFLLASFQFYMQSEPFGIDRDQHESSEYSHHTVFPKPVGPIMSQTNTR 129
F E L + PL + + FQF + +G E H + P+ + ++ Q +
Sbjct: 27 FHEELVVRPLSGDHVNTYFQFTTRWH-YG------EKDNLYHTQLTPRVIAELLQQFAVK 79
Query: 130 QLHLRFTHGLWDSQEWGQLPHNGLKSGGTGVELWAIVEAPS--KEEALKSWITLANSLSG 187
+LH+ T GLW + WG + +G E+WA + + + W LAN SG
Sbjct: 80 ELHIGLTQGLWRYETWGY----PIVEATSGAEMWAWFSGANLTNRDVDRQWKELANVFSG 135
Query: 188 LFCASINFIDTSKTTFPVSSFLPKEDEAIPLLNQSNHLYLMRATLANEPVCTENLTPFVK 247
+ CAS+NF+D + + P P+ + + ++ ATL E VCTENLTP+ K
Sbjct: 136 VLCASLNFVDNTNSIAPRHLIRPQ------FMPANGQRFVRYATLPREIVCTENLTPWKK 189
Query: 248 LLPTRGKSGISSLLDGHKIFDSNWHSLSIDVNTVC-DESTANCHFVMEEFIETVVNVPNA 306
LLP SG +SLL+ + ++ +HSL + V +C D NC
Sbjct: 190 LLPCGSASGFASLLNSGHVHNTKYHSLGLKVRVLCEDHDEDNCIV--------------- 234
Query: 307 LARADRPIPKPLPGDELRCDTNRPHDAFQCFPLPQSKEVSFSISKLFGKKIRGGSLLGEQ 366
EL N +D + F L + FS+ +LFG + G L E
Sbjct: 235 ---------------ELTQTANLVYD-LRLFELSNN---DFSLRRLFGMGLNGYCELAE- 274
Query: 367 SSKICVH----------VPS-----------HWDVMIQVD--ESYFATDDNCFDLNNNKP 403
SSKI V VP H V D E + + F++ P
Sbjct: 275 SSKIYVQRNELGERYQLVPEPVHEVKTTRGGHSVVYSVYDMHEQFKEAGERLFNVAWLAP 334
Query: 404 HDVRLETTDSKSVLPSKKTPIYVSRALTGYGQDRGGLRSVFRNPSNEAVELVYFESLPWF 463
+K LP P+ V R L G+GQ+RG + + N +A+ ++ E +PW+
Sbjct: 335 KSANRRRNLAKPSLP----PVTVHRYLLGHGQERGRIVTEVTNSHYDALPIMLQEVIPWY 390
Query: 464 MGVYLSSLAIESDDPELTLDSVVKSTF----YSPARDRERPTHLERAMIIPPNTAFAISF 519
+ YL +L+I + + TF Y+P + RE P+HLE ++P T+ IS
Sbjct: 391 VHAYLHTLSIRRKPQRVNEYGGQRLTFKLLHYTPGKQRELPSHLEIGFMLPGQTSALISI 450
Query: 520 QFDKSLLKYAEYPPDANHGFEIEAAVAA----------VLTPERY--------------- 554
D LLK+ EYPPDANHG I +A+ + L PE +
Sbjct: 451 DVDYLLLKWLEYPPDANHGHYIGSAIVSSQLPMGRNYTALPPEGHLFEHSFNATRPSYVL 510
Query: 555 EARTXXXXXXXXTPDFSMPYNVIILTSTVMGLAFGTLFNLISKQLI 600
T TPDFSMPYNVI L TV+ LAFG + ++ +K +I
Sbjct: 511 SLHTEALIVSLPTPDFSMPYNVICLACTVVALAFGPIHSVATKMII 556
>CE05654 [MO] KOG2407 GPI transamidase complex GPI16/PIG-T component
involved in glycosylphosphatidylinositol anchor
biosynthesis
Length = 531
Score = 152 bits (384), Expect = 2e-36
Identities = 139/536 (25%), Positives = 233/536 (42%), Gaps = 82/536 (15%)
Query: 60 LSLEHPIEYNFREHLDLTPLPNNFLLASFQFYMQSEPFGIDRDQHESSEYSHHTVFPKPV 119
LS H + NF E L L+P+ N L F+F +R+ + +E + FP+ +
Sbjct: 13 LSSCHGLSENFDEKLTLSPVSKNELRVDFRF-------NSEREFNRKTESGDYLTFPRII 65
Query: 120 GPIMSQTNTRQLHLRFTHGLWDSQEWGQLPHNGLKSGGTGVELWAIVEAPSKEEALKSWI 179
++S+ + R+L + HG W+ WG P S TG +++A EA +E+A +
Sbjct: 66 QELLSRYSVRKLTVTMAHGRWNLIGWGLPPQ---PSSPTGAQVFAEFEADQQEDADERMK 122
Query: 180 TLANSLSGLFCASINFIDTSKTTFPVSSFLPKEDEAIPLLNQSNH--LYLMRATLANEPV 237
L +L+G+ C SI+ I+ T P E I L N ++ L+ E
Sbjct: 123 FLVEALNGVLCTSISHINV--ITSP---------EFIVLKNHGGETSVHKRYGVLSGETT 171
Query: 238 CTENLTPFVKLLPTRGKSGISSLLDGHKIFDSNWHSLSIDVNTVCDESTANCHFVMEEFI 297
CTENLT KLL + ++GIS+LL K+++S +HS + V CD+ C+ ME +
Sbjct: 172 CTENLTRLRKLLACK-ENGISTLLHPSKLYNSVYHSSHLVVEQQCDKD--QCNSKMEVGV 228
Query: 298 ETVVNVPNALARADRPIPKPLPGDELRCDTNRPHDAFQCFPLPQSKEVSFSISKLFGKKI 357
V+ P+ Q + +S++ +F +K+
Sbjct: 229 SVVMRNPS-----------------------------------QKTQRHWSLADVFERKL 253
Query: 358 RGGSLLGEQSSKICVHVPSHWDVMIQVDESYFATDDNCFDLNNNKPHDVRLETTDSKSVL 417
G +SSKI HV + D T +N +P ++ + TD
Sbjct: 254 -GSQCKVARSSKI--HVIGTTGEITTTDVKNLTT------INGEEPFELYIPITDI---- 300
Query: 418 PSKKTPIYVSRALTGYGQDRGGLRSVFRNPSNEAVELVYFESLPWFMGVYLSSLAIESDD 477
S K + + + G + + G+ +V A E+ + +P+++ + S + + D
Sbjct: 301 -SMKQSVVKAWSSQGGFEQKHGVLTVHITNDESASEIHVSQIIPYYVHLRYSKINWKCDK 359
Query: 478 PEL-TLDSVVKSTFYSPARDRERPTHLERAMIIPPNTAFAISFQFDKSLLKYAEYPPDAN 536
+ ++ + K+ ++ E PT L+ M + ++ FDK LL+ +YPPDAN
Sbjct: 360 NGVPRIEKIFKN-----SKSLEAPTLLQYKMKLSAGQTCELTIPFDKQLLRLEQYPPDAN 414
Query: 537 HGFEIEAA-VAAVLTPERYEARTXXXXXXXXTPDFSMPYNVIILTSTVMGLAFGTL 591
HG I AA V + Y + PDFSMP+NVI +T L FG +
Sbjct: 415 HGMHIPAASVYIQKSTSTYTIHSNAILVLLPVPDFSMPFNVICFVATAFALVFGPI 470
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,788,034
Number of Sequences: 60738
Number of extensions: 1769860
Number of successful extensions: 3998
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3959
Number of HSP's gapped (non-prelim): 11
length of query: 643
length of database: 30,389,216
effective HSP length: 113
effective length of query: 530
effective length of database: 23,525,822
effective search space: 12468685660
effective search space used: 12468685660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)