ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI2619 good K KOG0008 Transcription Transcription initiation factor TFIID, subunit TAF1
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI2619 882253 879155 -1033
(1033 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR274c [K] KOG0008 Transcription initiation factor TFIID subuni... 875 0.0
SPAC2G11.14 [K] KOG0008 Transcription initiation factor TFIID su... 522 e-147
ECU10g0760 [K] KOG0008 Transcription initiation factor TFIID sub... 259 2e-68
7298896 [K] KOG0008 Transcription initiation factor TFIID subuni... 200 8e-51
Hs20357588_1 [K] KOG0008 Transcription initiation factor TFIID s... 197 5e-50
Hs20357585_1 [K] KOG0008 Transcription initiation factor TFIID s... 197 5e-50
CE26022 [K] KOG0008 Transcription initiation factor TFIID subuni... 169 2e-41
At1g32750 [K] KOG0008 Transcription initiation factor TFIID subu... 128 5e-29
At3g19040 [K] KOG0008 Transcription initiation factor TFIID subu... 123 1e-27
>YGR274c [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 1066
Score = 875 bits (2262), Expect = 0.0
Identities = 488/1049 (46%), Positives = 627/1049 (59%), Gaps = 82/1049 (7%)
Query: 19 DFSNEDDAYNALFGGEFGALDISNYTSG--GGNGKQ------------------DETEHL 58
+ +NED+AY A+FGGEFG+L+I +Y G G N K D+ + L
Sbjct: 11 NLANEDEAYEAIFGGEFGSLEIGSYIGGDEGANSKDYTEHLPDAVDFEDEDELADDDDDL 70
Query: 59 PNAIDFXXXXXXXXXXXXXXXXXSHSPNRHNEGSFQRSLTE-----------DDEYMTLM 107
P D + + + S L E +D+ T
Sbjct: 71 PEESDANLHPAMMTMGAYDDVNENGAVLGIDSNSLNMQLPEINGDLSQQFILEDDGGTPA 130
Query: 108 DHGDVMHEVDAAGFEVQGNNALFMESTYQSFGPEQHQF-----NEYDEQHRRLMEEQRRK 162
+ +DA + + S G Q N+ +ME
Sbjct: 131 TSNALFMGMDANEIHLATETGVLDGSGANEIGHSQLSIGGVNGNDMSINGGFIMEPDMSD 190
Query: 163 QEEQNAKE------EQLLFQSYFPELKPGRVLRMTKIAPKPLAKYQWQRELYLRNRILKP 216
+ + A + E+ L + YFP+ + G++L+ K+ + Y W E+ +R+ KP
Sbjct: 191 GKHKKATKLDLINHEKYLLKKYFPDFEKGKILKWNKLIYRRSVPYHWHSEI---SRVKKP 247
Query: 217 LIPIKVKFQVQKDTKKLFKMRSKS-VKPW----QSAISEFSEVQRRNVIKVAYDEIYK-E 270
+P+ +KF+VQ+D K+LF R+ S V P + + S RR +I V+ DE++ +
Sbjct: 248 FMPLNLKFKVQQDDKRLFNSRTISYVAPIYQGKNNLLQSNSSASRRGLIHVSIDELFPIK 307
Query: 271 DTVDDKKDEHDE-VIPEDLLIVADEWDYEKIVDDRENEEPMTSNKRNPP--------AVE 321
+ +K HDE I EDLLI D+WD EKI++ + ++ P ++
Sbjct: 308 EQQKKRKIIHDEKTISEDLLIATDDWDQEKIINQGTSSTATLADSSMTPNLKFSGGYKLK 367
Query: 322 NTLEEDGKDWEWNEDDIINGKVS-AKEPPIDMNDERLLILPNENKIESAQKVVKP----L 376
+ +E+ +DW+W+ED II+ K+ +K ++MNDE+LL++ + + QK +
Sbjct: 368 SLIEDVAEDWQWDEDMIIDAKLKESKHAELNMNDEKLLLMIEKTNNLAQQKQQLDSSNLI 427
Query: 377 IPYNEKSLLAKFNISNDDTYKILKKNYQKKIRSTISNLNIEHSQPATRLQSPFYKVVLPK 436
+P NE L KFN+SNDD Y+ILKK +Q K+RSTISNLNI+HSQPA LQSPFYKV +P+
Sbjct: 428 LPLNETILQQKFNLSNDDKYQILKKTHQTKVRSTISNLNIQHSQPAINLQSPFYKVAVPR 487
Query: 437 DQLRHFHRNHFGKRIRPGTNIVFSXXXXXXXXXXXXXXVHEIFQHSADLTVGDSAQVFLM 496
QLRHFHR +FG IRPGT IVFS V E F S DLT+GD+A V+LM
Sbjct: 488 YQLRHFHRENFGSHIRPGTKIVFSKLKARKRKRDKGKDVKESFSTSQDLTIGDTAPVYLM 547
Query: 497 EYSEQQPVALSKFGMANKLINYYRKTGETDSSRPKLPVGETHVLGVQDKSPFWNFGFVSP 556
EYSEQ PVALSKFGMANKLINYYRK E D+ RPKLPVGETHVLGVQDKSPFWNFGFV P
Sbjct: 548 EYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLPVGETHVLGVQDKSPFWNFGFVEP 607
Query: 557 GNIVPTLYNNMVRAPVFKHEVSKTDFLLVKSLGNGSGNRFYLRQINHLFAVGQTFPVVEV 616
G+IVPTLYNNM+RAPVFKH++S TDFLL KS G G NRFYLR INHLF VGQTFPV E+
Sbjct: 608 GHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGISNRFYLRNINHLFTVGQTFPVEEI 667
Query: 617 PGPNSRKVTAMGKNRLRMVVYRILNKSPENRLLVKQVARHFPEQNDMQNRQRLKEFMKYQ 676
PGPNSRKVT+M RL+M++YRILN + + + +A+HFP+Q+ QNRQ++KEFMKYQ
Sbjct: 668 PGPNSRKVTSMKATRLKMIIYRILNHNHSKAISIDPIAKHFPDQDYGQNRQKVKEFMKYQ 727
Query: 677 REGDDQGFWKLKEGEVLLDNENVKKMVTPEDVSLVESMYYGQQFQEDIDFYNFDERAKEL 736
R+G ++G W+LK+ E LLDNE VK ++TPE +S VESM G QFQED + YNFD + K L
Sbjct: 728 RDGPEKGLWRLKDDEKLLDNEAVKSLITPEQISQVESMSQGLQFQEDNEAYNFDSKLKSL 787
Query: 737 EENLIFWNATKNFLNATQMRAMIQIHGPGDPTGCGEGFSFLKTSMKGGFVKSGSKDQPQI 796
EENL+ WN TKNF+N+TQMRAMIQIHG GDPTGCGEGFSFLKTSMKGGFVKSGS
Sbjct: 788 EENLLPWNITKNFINSTQMRAMIQIHGVGDPTGCGEGFSFLKTSMKGGFVKSGSPSSNNN 847
Query: 797 AGG------HSYNVAQQQKAYEEEISRTWYNQAKSLSIQNPFEEMDDPDIVNESNKHVPS 850
+ HSYNVAQQQKAY+EEI++TWY KSLSI NPFEEM +PD +N++NKHV +
Sbjct: 848 SSNKKGTNTHSYNVAQQQKAYDEEIAKTWYTHTKSLSISNPFEEMTNPDEINQTNKHVKT 907
Query: 851 TRPDEKVLRITRKKRDSNGIIQRQTVIVRDPRVIQGYLXXXXXXXXXXXXNL-------- 902
R D+K+L+I RKKRD NGIIQRQT+ +RDPRVIQGY+ L
Sbjct: 908 DRDDKKILKIVRKKRDENGIIQRQTIFIRDPRVIQGYIKIKEQDKEDVNKLLEEDTSKIN 967
Query: 903 GLDELIND-NITIVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKDGKV- 960
L+EL + + DGK
Sbjct: 968 NLEELEKQKKLLQLELANLEKSQQRRAARQNSKRNGGATRTENSVDNGSDLAGVTDGKAA 1027
Query: 961 -SKSKNTTRRCATCGAIGHIRTNKSCPMY 988
+K KNTTRRCATCG IGHIRTNKSCPMY
Sbjct: 1028 RNKGKNTTRRCATCGQIGHIRTNKSCPMY 1056
>SPAC2G11.14 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 979
Score = 522 bits (1345), Expect = e-147
Identities = 312/850 (36%), Positives = 468/850 (54%), Gaps = 71/850 (8%)
Query: 163 QEEQN-AKEEQLLFQSYFPELKPGRVLRMTKI-APKPLAKYQWQRELYLRNRILKPLIPI 220
+E QN A+ + + +++FP + G +L +++ PKP+ + + + K +P
Sbjct: 163 EELQNEAQIRESIVKTFFPTFERGVLLNFSELFKPKPV------KLAPPKKKTPKVCVPG 216
Query: 221 KVKFQVQKDTKKLFKMRSKSVKPWQSAISEFSEVQRRNVIKVAYDEIYKEDTVDDKKDEH 280
++ +V D +F S+ S +RNV+ K + +
Sbjct: 217 RLTLEVDTDYAIIFN-------------SKKSLPLKRNVVSPISTHTKKRRRTANTSQRN 263
Query: 281 DEVIPEDLLIVADEWDYEKIVDDRENEEPMTSNKRNPPA--VENTLEEDGKDWEWNEDDI 338
D + + + ++W+ I D+ + NK N + ++ +L + D+ ++E+ I
Sbjct: 264 DG-LDLNTVFTTNDWEKNIIYDESD------VNKTNQSSFFIDKSLVDI--DFAFDEN-I 313
Query: 339 INGKVSAKEPPIDMNDERLLILPNENKIESAQKVVKPLIPYNEKSLLAKFNISNDDTYKI 398
+G + +++ND +LL+ P K E +Q+ + SL KFNISND Y++
Sbjct: 314 FDGDTGTSKVVLNLNDPKLLLQPQLPKKEDSQRSFADT--HQRNSLAWKFNISNDPAYEM 371
Query: 399 LKKNYQKKIRSTISNLNIEHSQPATRLQSPFYKVVLPKDQLRHFHRNHFGKRIRPGTNIV 458
LK+N+Q K+R+T+S L IEH+ A +L P+YK L K +R +HR +P IV
Sbjct: 372 LKQNHQSKVRNTLSQLAIEHAAFAEKLTFPYYKTRLSKRAVRSYHRPTMS--FKPNAAIV 429
Query: 459 FSXXXXXXXXXXXXXXVHEIFQHSADLTVGDSAQVFLMEYSEQQPVALSKFGMANKLINY 518
FS E+ + ++T+GD+ L+E+SE+ P LS GMA++++NY
Sbjct: 430 FSPLIVRKRSKDKHKSERELIPTTKEITMGDTTHAILVEFSEEHPAVLSNAGMASRIVNY 489
Query: 519 YRKTGETDSSRPKLPVGETHVLGVQDKSPFWNFGFVSPGNIVPTLYNNMVRAPVFKHEVS 578
YRK E D SRPKL VGE+HVL VQD+SPFWNFG V PG I PTLYN M+RAP+FKHEV
Sbjct: 490 YRKKNEQDESRPKLEVGESHVLDVQDRSPFWNFGSVEPGEITPTLYNKMIRAPLFKHEVP 549
Query: 579 KTDFLLVKSLGNGSGNRFYLRQINHLFAVGQTFPVVEVPGPNSRKVTAMGKNRLRMVVYR 638
TDF+L+++ + G+++YL+ INH+F GQTFPV +VPGP+SRKVT KNRL+M+V+R
Sbjct: 550 PTDFILIRN-SSSYGSKYYLKNINHMFVSGQTFPVTDVPGPHSRKVTTASKNRLKMLVFR 608
Query: 639 ILNKSPENRLLVKQVARHFPEQNDMQNRQRLKEFMKYQREGDDQGFWKLKEGEVLLDNEN 698
++ +SP L ++Q+++HF +QN+MQ RQRLKEFM+Y+++GD G+WKLK EV+ D
Sbjct: 609 LIRRSPNGGLFIRQLSKHFSDQNEMQIRQRLKEFMEYKKKGDGPGYWKLKSNEVVPDEAG 668
Query: 699 VKKMVTPEDVSLVESMYYGQQFQED------IDFYNFDERAKELEENLIF-WNATKNFLN 751
+ MV+PE V L+ESM G + ED +D N DE ++ E L+ W T+NF+N
Sbjct: 669 TRSMVSPETVCLLESMQVGVRQLEDAGYGKTMDEINDDEDEEQPAEQLLAPWITTRNFIN 728
Query: 752 ATQMRAMIQIHGPGDPTGCGEGFSFLKTSMKGGFVKSG----SKDQPQIAGGHSYNVAQQ 807
ATQ +AM+ + G GDPTG GEG+SF++TSMKGGF +G K +PQ H+YNVA+Q
Sbjct: 729 ATQGKAMLTLFGEGDPTGIGEGYSFIRTSMKGGFKPAGETADDKPEPQTKNAHAYNVAKQ 788
Query: 808 QKAYEEEISRTWYNQAKSLSIQNPFEEMDDPDIVN-------ESNKHV--PSTRPDEKVL 858
Q+AYEEEI+R W Q + LSI N EE+ +N ESN+ T +KVL
Sbjct: 789 QRAYEEEINRIWNAQKRGLSINN-LEELAKKYGINSIHDDYVESNEETTREETPSSDKVL 847
Query: 859 RITRKKRDSNGIIQRQTVIVRDPRVIQGYLXXXXXXXXXXXXNLGLDELINDNITIVGGX 918
RI R RD NG ++R+ + DP VI YL + D + G
Sbjct: 848 RIVRLYRDKNGNLERKQETIHDPIVIHAYL--------KKRREIDEQSTALDAVVPTGDE 899
Query: 919 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKDGKVSKSKNTTRRCATCGAIGH 978
+G+ K TTR+C+ CG +GH
Sbjct: 900 AIDRRNRRRLEQELAKSQKNWERRRARHAAKEGINLNGEGR----KPTTRKCSNCGQVGH 955
Query: 979 IRTNKSCPMY 988
++TNK CP++
Sbjct: 956 MKTNKICPLF 965
>ECU10g0760 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 883
Score = 259 bits (661), Expect = 2e-68
Identities = 198/635 (31%), Positives = 300/635 (47%), Gaps = 48/635 (7%)
Query: 266 EIYKEDTVDDKKDEHDEV-IPEDLLIVADEWDYEKIVDDRENEEPMTSNKRNPPAVENTL 324
EI K +DD E +EV P DL+ EW+ I D M + V++ L
Sbjct: 112 EISKRKALDDSLREVEEVKYPFDLV----EWENNIIYDFDRAGGRMKMDTVTTEFVDSIL 167
Query: 325 EEDGKDWEWNEDDIINGKVSAKEPPIDMNDERLLILPNENKIESAQKVVKPLIPYNEKSL 384
EED + + ++ + + S + + D L+ ++K ++ K + + +K L
Sbjct: 168 EEDWERYVVVDESDMKSRKSFLT--LYLEDPNLIFEKIDDKRQAKPKKKQKEVFSVDKPL 225
Query: 385 LAKFNISNDDTYKILKKNYQKKIRSTISNLNIEHSQPATRLQSPFYKVVLPKDQLRHFHR 444
K+NIS D Y + K ++++ ++HS PA RL FYK K++LR+FHR
Sbjct: 226 KGKYNISLDKYY-----GQESKAKNSLGTFGVQHSLPALRLDPMFYKNNHTKEELRNFHR 280
Query: 445 NHFGKRIRPGTNIVFSXXXXXXXXXXXXXXVHEIFQHSADLTVGDSAQVFLMEYSEQQPV 504
F R G+NI F I + + +LTV D++ L EYSE++P
Sbjct: 281 PRFMVR---GSNIRFKTIEAGRNKPQG------IIKKAGELTVRDASPFSLFEYSEEEPF 331
Query: 505 ALSKFGMANKLINYYRKTGETDSSRPKLPVGETHVLGVQDKSPFWNFGFVSPGNIVPTLY 564
L GM + L YYRK+ D P + VL +D SPF+ FG V+PG + L
Sbjct: 332 FLVNPGMVSLLNIYYRKSNARDEYAPDQ--SQYTVLDPEDPSPFFGFGDVTPGTSIQALT 389
Query: 565 NNMVRAPVFKHEVSKTDFLLVKSLGNGSGNRFYLRQINHLFAVGQTFPVVEVPGPNSRKV 624
NN+ APVFKH S D+L + N R I++L+ VGQ FP+ EV P+SRK+
Sbjct: 390 NNLFIAPVFKH--SSGDYLCIVEPSNSGEMSLVYRSIDNLYCVGQQFPLEEVYAPHSRKL 447
Query: 625 TAMGKNRLRMVVYRILNKSP--ENRLLVKQVARHFPEQNDMQNRQRLKEFMKYQREGDDQ 682
KNRL++ +R+ N L + Q+ FP ++ R+ LKE+ ++G D
Sbjct: 448 NVFCKNRLKVAAFRLFNSKEGGSKELRISQLDEMFPYFSEGSKRKWLKEYADCVKKGRDN 507
Query: 683 GFWKLKEGEVLLDNENVKKMVTPEDVSLVESMYYGQQFQEDIDFYNFDERAKELEENLIF 742
W L+ LL E+++K+VTPE++ ESM G++ +D + E E E +
Sbjct: 508 -VWVLRPSSALLGEEDLRKLVTPENICQYESMLAGERKLQDSGYKTVVESDDEENEEEMA 566
Query: 743 ---WNATKNFLNATQMRAMIQIHGPGDPTGCGEGFSFLKTSMKGGFVKSGSKDQPQIAGG 799
W ++NF+NA R ++++ GPGDP+G GEGFSF K +K G K
Sbjct: 567 PPPWCLSRNFVNACNGRGLLELSGPGDPSGIGEGFSFRKIRLKRGNEVENRK-------- 618
Query: 800 HSYNVAQQQKAYEEEISRTWYNQAKSLSI--QNPFEEMDDPDIVNESNKHV----PSTRP 853
+ + Q Y+EEI R W Q SLS + PF+E E K+ +T
Sbjct: 619 ---IINEHQSRYKEEIDRIWSKQLASLSSVEEIPFDESFLARRHREERKNADLLSETTML 675
Query: 854 DEKVLRITRKKRDSNGIIQRQTVIVRDPRVIQGYL 888
E+ R+ + V DPRVI+ YL
Sbjct: 676 SEETHLTIRRTYGEGSTSYVEVERVSDPRVIKAYL 710
>7298896 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 2065
Score = 200 bits (509), Expect = 8e-51
Identities = 143/532 (26%), Positives = 246/532 (45%), Gaps = 84/532 (15%)
Query: 331 WEWNEDDIINGKVSAKEPP-----IDMNDERLLI-LPNE------NKIESAQKVVKPLIP 378
++W ++ I + + +K P +D NDE +++ +P++ NK +K P
Sbjct: 515 YKWEDEVIWDAQQVSKVPKPKVLTLDPNDENIILGIPDDIDPSKINKSTGPPPKIKIPHP 574
Query: 379 YNEKS--LLAK-----------------------FNISNDDTYKILKKNYQKKIRSTISN 413
+ +KS LL K FNISND Y + +R +
Sbjct: 575 HVKKSKILLGKAGVINVLAEDTPPPPPKSPDRDPFNISNDTYYT---PKTEPTLRLKVGG 631
Query: 414 LNIEHSQPATRLQSPFYKVVLPKDQLRHFHRNHFGKR------------IRPGTNIVFSX 461
I+HS P L++PF + +LR FHR K + P +
Sbjct: 632 NLIQHSTPVVELRAPFVPTHMGPMKLRAFHRPPLKKYSHGPMAQSIPHPVFPLLKTIAKK 691
Query: 462 XXXXXXXXXXXXXVHEIFQHSADLTVGDSAQVFLMEYSEQQPVALSKFGMANKLINYYRK 521
F + + G + L E+ E+ P +++ GM +K+ NYY++
Sbjct: 692 AKQREVERIASGGGDVFFMRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKR 751
Query: 522 TGETDSSRPKLPVGETHVLGVQDKSPFWNFGFVSPGNIVPTLYNNMVRAPVFKHEVSKTD 581
E DS GE + SPF G + PG + + NNM RAP++ H+++ D
Sbjct: 752 KAEKDSGPQDFVYGE---VAFAHTSPF--LGILHPGQCIQAIENNMYRAPIYPHKMAHND 806
Query: 582 FLLVKSLGNGSGNRFYLRQINHLFAVGQTFPVVEVPGPNSRKVTAMGKNRLRMVVYRILN 641
FL++++ N +++R +N ++ VGQ P+ EVPGPNS++ ++ L++ +YR+
Sbjct: 807 FLVIRTRNN-----YWIRSVNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFW 861
Query: 642 KSPEN--RLLVKQVARHFPEQNDMQNRQRLKEFMKYQREGDDQGFWKLKEGEVLLDNENV 699
KS +N R+ + + + FP ++ R+RLK+ ++R G D +W +K L E +
Sbjct: 862 KSRDNPRRIRMDDIKQAFPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEI 921
Query: 700 KKMVTPEDVSLVESMY----------YGQQF----QEDIDFYNFDERAKELEENLIF--W 743
+ MV+PE SM YG++F QED D +E +L++ + W
Sbjct: 922 RAMVSPEQCCAYFSMIAAEQRLKDAGYGEKFLFAPQEDDD----EEAQLKLDDEVKVAPW 977
Query: 744 NATKNFLNATQMRAMIQIHGPGDPTGCGEGFSFLKTSMKGGFVKSGSKDQPQ 795
N T+ ++ A + + ++Q+ GP DPTGCGEGFS+++ K K + QP+
Sbjct: 978 NTTRAYIQAMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQTKEEQESQPK 1029
>Hs20357588_1 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 1689
Score = 197 bits (502), Expect = 5e-50
Identities = 147/518 (28%), Positives = 240/518 (45%), Gaps = 70/518 (13%)
Query: 333 WNEDDIINGKVSAK--EPPI---DMNDERLLI-LPNE------------NKIESAQK--- 371
W ++ I + + + EPP+ D NDE L++ +P+E +K ES+ K
Sbjct: 480 WEDNIIWDAQAMPRLLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSR 539
Query: 372 -------VVK--PLIPYNEKSLLAKFNISNDDTYKILKKNYQKKIRSTISNLNIEHSQPA 422
V+K P ++ + +N+SND+ Y Q+ +R T I+HS PA
Sbjct: 540 ILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYY----PKQQGLRGTFGGNIIQHSIPA 595
Query: 423 TRLQSPFYKVVLPKDQLRHFHRN-----HFGKRIRPGTNIVFSXXXXXXXXXXXXXXVHE 477
L+ PF+ + +LR FHR FG +PG + V +
Sbjct: 596 VELRQPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQ 655
Query: 478 -------IFQHSADLTVGDSAQVFLMEYSEQQPVALSKFGMANKLINYYRKTGETDSSRP 530
F + G + L EYSE+ + + GMA K+ NYY++ D P
Sbjct: 656 ASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAP 715
Query: 531 KLPVGETHVLGVQDKSPFWNFGFVSPGNIVPTLYNNMVRAPVFKHEVSKTDFLLVKSLGN 590
GET SPF G + PG ++ NN+ RAP++ H++ +TDFL++++
Sbjct: 716 DCKYGETVYCHT---SPF--LGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG 770
Query: 591 GSGNRFYLRQINHLFAVGQTFPVVEVPGPNSRKVTAMGKNRLRMVVYRILNKSPEN--RL 648
+Y+R++ +F VGQ P+ EVPGPNS++ ++ L++ +YR+ KS + R+
Sbjct: 771 -----YYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRI 825
Query: 649 LVKQVARHFPEQNDMQNRQRLKEFMKYQREGDDQGFWKLKEGEVLLDNENVKKMVTPEDV 708
++ + + FP ++ R+RLK ++R G D +W LK L E ++ MV+PE
Sbjct: 826 RMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQC 885
Query: 709 SLVESMYYGQQFQEDIDFYNFDERAKELEENLIF------------WNATKNFLNATQMR 756
SM +Q +D + A E E F WN T+ F+ A + +
Sbjct: 886 CAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGK 945
Query: 757 AMIQIHGPGDPTGCGEGFSFLKTSMKGGFVKSGSKDQP 794
++++ G DPTGCGEGFS++K K K + QP
Sbjct: 946 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQP 983
>Hs20357585_1 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 1710
Score = 197 bits (502), Expect = 5e-50
Identities = 147/518 (28%), Positives = 240/518 (45%), Gaps = 70/518 (13%)
Query: 333 WNEDDIINGKVSAK--EPPI---DMNDERLLI-LPNE------------NKIESAQK--- 371
W ++ I + + + EPP+ D NDE L++ +P+E +K ES+ K
Sbjct: 501 WEDNIIWDAQAMPRLLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSR 560
Query: 372 -------VVK--PLIPYNEKSLLAKFNISNDDTYKILKKNYQKKIRSTISNLNIEHSQPA 422
V+K P ++ + +N+SND+ Y Q+ +R T I+HS PA
Sbjct: 561 ILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYY----PKQQGLRGTFGGNIIQHSIPA 616
Query: 423 TRLQSPFYKVVLPKDQLRHFHRN-----HFGKRIRPGTNIVFSXXXXXXXXXXXXXXVHE 477
L+ PF+ + +LR FHR FG +PG + V +
Sbjct: 617 VELRQPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQ 676
Query: 478 -------IFQHSADLTVGDSAQVFLMEYSEQQPVALSKFGMANKLINYYRKTGETDSSRP 530
F + G + L EYSE+ + + GMA K+ NYY++ D P
Sbjct: 677 ASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAP 736
Query: 531 KLPVGETHVLGVQDKSPFWNFGFVSPGNIVPTLYNNMVRAPVFKHEVSKTDFLLVKSLGN 590
GET SPF G + PG ++ NN+ RAP++ H++ +TDFL++++
Sbjct: 737 DCKYGETVYCHT---SPF--LGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG 791
Query: 591 GSGNRFYLRQINHLFAVGQTFPVVEVPGPNSRKVTAMGKNRLRMVVYRILNKSPEN--RL 648
+Y+R++ +F VGQ P+ EVPGPNS++ ++ L++ +YR+ KS + R+
Sbjct: 792 -----YYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRI 846
Query: 649 LVKQVARHFPEQNDMQNRQRLKEFMKYQREGDDQGFWKLKEGEVLLDNENVKKMVTPEDV 708
++ + + FP ++ R+RLK ++R G D +W LK L E ++ MV+PE
Sbjct: 847 RMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQC 906
Query: 709 SLVESMYYGQQFQEDIDFYNFDERAKELEENLIF------------WNATKNFLNATQMR 756
SM +Q +D + A E E F WN T+ F+ A + +
Sbjct: 907 CAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGK 966
Query: 757 AMIQIHGPGDPTGCGEGFSFLKTSMKGGFVKSGSKDQP 794
++++ G DPTGCGEGFS++K K K + QP
Sbjct: 967 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQP 1004
>CE26022 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 1792
Score = 169 bits (429), Expect = 2e-41
Identities = 146/554 (26%), Positives = 241/554 (43%), Gaps = 89/554 (16%)
Query: 388 FNISNDDTYKILKKNYQKKIRSTISN--LNIEHSQPATRLQSPFYKVVLPKDQLRHFHRN 445
FN+SNDD Y K T+SN L I+HS PAT + + F+ +LR++HR
Sbjct: 489 FNLSNDDYY------VPKATSKTLSNNSLLIQHSTPATNIATHFFPTHPSAFRLRYWHRT 542
Query: 446 HFGKRI-RPGTNIVFSXXXXXXXXXXXXXXVHEIFQHSA------------DLTVGDSAQ 492
F +RI R + F + E + + DL+ D
Sbjct: 543 PFTRRIVRHWQPMRFQPIQTPVKHQQRVAAMREAMRQAQGGGEVFYMRDVQDLSGKDETL 602
Query: 493 VFLMEYSEQQPVALSKFGMANKLINYYRKTGETDSSRPKLPVGETHVLGVQDKSPFWNFG 552
V ++EYSE+ PV LS+ GMA+K+ NY+++ DS P GE L + PF G
Sbjct: 603 V-MIEYSEEHPVILSQPGMASKMKNYFKRRQANDSE-PTFTFGE---LAFSHQIPF--LG 655
Query: 553 FVSPGNIVPTLYNNMVRAPVFKHEVSKTDFLLVKSLGN---------------------- 590
+ PG + ++ N + RAP++ H+ TDFLL++S+ +
Sbjct: 656 QLQPGQSLQSIENMLYRAPIYLHKRQNTDFLLIRSMNHLNQIFKILILVEAHTLQTTTFL 715
Query: 591 ---------------------GSGNRFYLRQINHLFAVGQTFPVVEVPGPNSRKVTAMGK 629
S R+Y+R + +F GQ P+ EVP PNS++ T +
Sbjct: 716 ASTKKLILVEAHTLQTTKFLASSNFRWYIRPLPSIFVAGQQCPLYEVPSPNSKRATVFVR 775
Query: 630 NRLRMVVYRIL--NKSPENRLLVKQVARHFPEQNDMQNRQRLKEFMKYQREGDDQGFWKL 687
+ L +YR+ + S RL + V FP + R+RLK + R+G + +W L
Sbjct: 776 DFLFAFIYRLFWASDSSPRRLKMDDVRNAFPHYAESNIRKRLKMCSTFVRQGSET-YWSL 834
Query: 688 KEGEVLLDNENVKKMVTPEDVSLVESMYYGQQFQEDIDF---YNF---------DERAKE 735
K L E V MVTPE SM +Q +D + Y F DE E
Sbjct: 835 KPDFRLPSKEEVLSMVTPEMCCAQYSMMAAEQRLKDAGYGEKYFFTPENDEGSEDEVTIE 894
Query: 736 LEENLIFWNATKNFLNATQMRAMIQIHGPGDPTGCGEGFSFLKTSMKGGFVKSGSKDQPQ 795
E WN T+ FL + + + ++ G DPTGCG+GFS+++ S K ++ + +
Sbjct: 895 DEIKCAPWNTTRAFLASQREKCLLDQTGIADPTGCGQGFSYVRVSQKPHKDENATPVPKK 954
Query: 796 IAGGHSYNVAQQQKAYEEEISRTWYNQAKSLSIQNPFEEMDDPDIVNESNKHVPSTRPDE 855
+ G + ++ + ++I R + + + +S +E + D++ + D
Sbjct: 955 LVTGTNADLRKLPLKEAKQICRGYGVKEEEISALTRWEII---DVIRTLSTQAAKATKDG 1011
Query: 856 KVLRITRKKRDSNG 869
+++ ++ R + G
Sbjct: 1012 EIIAVSGMARFARG 1025
>At1g32750 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 1919
Score = 128 bits (321), Expect = 5e-29
Identities = 101/336 (30%), Positives = 156/336 (46%), Gaps = 39/336 (11%)
Query: 479 FQHSADLTVGDSAQVFLMEYSEQQPVALSKFGMANKLINYYRKTGETDSSRPKL-----P 533
F+ +DL+ D VFLMEY E++P+ LS GM L YY+K+ D L
Sbjct: 757 FKKKSDLSTKDG-HVFLMEYCEERPLMLSNAGMGANLCTYYQKSSPEDQRGNLLRNQSDT 815
Query: 534 VGETHVLGVQDKSPFWNFGFVSPGNIVPTLYNNMVRAPVFKHEVSKTDFLLVKSLGNGSG 593
+G +L DKSPF G + G ++ NM +AP+F + TD+LLV+S
Sbjct: 816 LGNVMILEPGDKSPF--LGEIHAGCSQSSVETNMYKAPIFPQRLQSTDYLLVRS----PK 869
Query: 594 NRFYLRQINHLFAVGQTFPVVEVPGPNSRKVTAMGKNRLRMVVYRILNK--SPENRLLVK 651
+ LR+I+ + VGQ P +EV P S+ + NR+ + VYR K E+ +
Sbjct: 870 GKLSLRRIDKIVVVGQQEPRMEVMSPGSKNLQTYLVNRMLVYVYREFFKRGGGEHPIAAD 929
Query: 652 QVARHFPEQNDMQNRQRLKEFMKYQREGDDQGFWKLKEGEVLLDNENVKKMVTPEDVSLV 711
+++ F D ++ +K ++R+ + Q +W K+ + +KK+V PE V
Sbjct: 930 ELSFLFSNLTDAIIKKNMKIIACWKRDKNGQSYWTKKDSLLEPPESELKKLVAPEHVCSY 989
Query: 712 ESMYYGQQFQEDIDFYNFDERAK---------------------ELEENLIFWNATKNFL 750
ESM G + + F A E E + WN + NF+
Sbjct: 990 ESMLAGLYRLKHLGITRFTLPASISNALAQLPDEAIALAAASHIERELQITPWNLSSNFV 1049
Query: 751 NAT-QMRAMI---QIHGPGDPTGCGEGFSFLKTSMK 782
T Q RA I +I G GDP+G G GFS+++ + K
Sbjct: 1050 ACTNQDRANIERLEITGVGDPSGRGLGFSYVRAAPK 1085
>At3g19040 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 1700
Score = 123 bits (309), Expect = 1e-27
Identities = 108/353 (30%), Positives = 166/353 (46%), Gaps = 46/353 (13%)
Query: 479 FQHSADLTVGDSAQVFLMEYSEQQPVALSKFGMANKLINYYRKTGETDSSRPKL-----P 533
F+ +DL+ D VFLMEY E++P+ LS GM L YY+K+ D L
Sbjct: 596 FKKKSDLSNQDG-HVFLMEYCEERPLMLSNAGMGANLCTYYQKSSPEDQHGNLLRNQSDT 654
Query: 534 VGETHVLGVQDKSPFWNFGFVSPGNIVPTLYNNMVRAPVFKHEVSKTDFLLVKSLGNGSG 593
+G +L +KSPF G V G ++ NM +APVF H + TD+LLV+S +
Sbjct: 655 LGSVIILEHGNKSPF--LGEVHGGCSQSSVETNMYKAPVFPHRLQSTDYLLVRS----AK 708
Query: 594 NRFYLRQINHLFAVGQTFPVVEVPGPNSRKVTAMGKNRLRMVVYRILNKSPENRLLVKQV 653
+ LR+IN + AVGQ P +E+ P S+ + A NR+ VYR +R+ ++
Sbjct: 709 GKLSLRRINKIVAVGQQEPRMEIMSPASKNLHAYLVNRMMAYVYREFKH--RDRIAADEL 766
Query: 654 ARHFPEQNDMQNRQRLKEFMKYQREGDDQGFW--KLKEGEVLLDNENVKKMVTPEDVSLV 711
+ F +D R+ ++ +R+ + + W K K ++ L + +V PEDV
Sbjct: 767 SFSFSNISDATVRKYMQVCSDLERDANGKACWSKKRKFDKIPL---GLNTLVAPEDVCSY 823
Query: 712 ESMYYGQQFQEDIDFYNF--------------DER-------AKELEENLIFWNATKNFL 750
ESM G + + F DER A+EL+ + WN + +F+
Sbjct: 824 ESMLAGLFRLKHLGITRFTLPASISTALAQLPDERIAAASHIARELQ--ITPWNLSSSFV 881
Query: 751 N-ATQMRAMI---QIHGPGDPTGCGEGFSFLKTSMKGGFVKSGSKDQPQIAGG 799
ATQ R I +I G GDP+G G GFS+++ + K K + G
Sbjct: 882 TCATQGRENIERLEITGVGDPSGRGLGFSYVRVAPKSSAASEHKKKKAAACRG 934
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,800,253
Number of Sequences: 60738
Number of extensions: 2643719
Number of successful extensions: 8365
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 8281
Number of HSP's gapped (non-prelim): 42
length of query: 1033
length of database: 30,389,216
effective HSP length: 117
effective length of query: 916
effective length of database: 23,282,870
effective search space: 21327108920
effective search space used: 21327108920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)