ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI2739 good J KOG1728 Translation, ribosomal structure and biogenesis 40S ribosomal protein S11
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI2739 Highly similar to YDR025w SP|P26781 RPS18A
ribosomal protein S11.e {P2.440.f2.1} [INTRON]
(117 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR025w [J] KOG1728 40S ribosomal protein S11 226 4e-60
YBR048w [J] KOG1728 40S ribosomal protein S11 226 4e-60
SPAC31G5.03 [J] KOG1728 40S ribosomal protein S11 187 3e-48
SPAC144.11 [J] KOG1728 40S ribosomal protein S11 187 3e-48
Hs4506681 [J] KOG1728 40S ribosomal protein S11 179 6e-46
At4g30800 [J] KOG1728 40S ribosomal protein S11 171 2e-43
At3g48930 [J] KOG1728 40S ribosomal protein S11 168 1e-42
CE05860 [J] KOG1728 40S ribosomal protein S11 167 2e-42
At5g23740 [J] KOG1728 40S ribosomal protein S11 166 4e-42
7303497 [J] KOG1728 40S ribosomal protein S11 161 1e-40
Hs17460599 [J] KOG1728 40S ribosomal protein S11 142 7e-35
ECU04g0640 [J] KOG1728 40S ribosomal protein S11 105 1e-23
Hs22046070 [J] KOG1728 40S ribosomal protein S11 64 4e-11
At1g49400 [J] KOG1740 Predicted mitochondrial/chloroplast riboso... 44 3e-05
At1g79850 [J] KOG1740 Predicted mitochondrial/chloroplast riboso... 44 5e-05
SPBC409.14c [J] KOG1740 Predicted mitochondrial/chloroplast ribo... 43 8e-05
At3g18880 [J] KOG1740 Predicted mitochondrial/chloroplast riboso... 42 1e-04
YHR033w [E] KOG1154 Gamma-glutamyl kinase 33 0.083
CE09880 [I] KOG1202 Animal-type fatty acid synthase and related ... 30 0.71
SPAC1565.08 [O] KOG0730 AAA+-type ATPase 28 1.6
YDL126c [O] KOG0730 AAA+-type ATPase 28 2.1
Hs17476954 [C] KOG4075 Cytochrome c oxidase subunit IV/COX5b 27 3.5
Hs13787209 [A] KOG0331 ATP-dependent RNA helicase 27 6.0
YMR188c [J] KOG1740 Predicted mitochondrial/chloroplast ribosoma... 26 7.8
>YDR025w [J] KOG1728 40S ribosomal protein S11
Length = 156
Score = 226 bits (576), Expect = 4e-60
Identities = 108/117 (92%), Positives = 114/117 (97%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNR 60
+GFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVST+MHRTIVIRR YLHY+PKYNR
Sbjct: 40 LGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNR 99
Query: 61 YEKRHKNVPAHVSPAFRVQVGDIVTVGQCRPISKTVRFNVLKVASATGKANKQFAKF 117
YEKRHKNVP HVSPAFRVQVGDIVTVGQCRPISKTVRFNV+KV++A GKANKQFAKF
Sbjct: 100 YEKRHKNVPVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKVSAAAGKANKQFAKF 156
>YBR048w [J] KOG1728 40S ribosomal protein S11
Length = 156
Score = 226 bits (576), Expect = 4e-60
Identities = 108/117 (92%), Positives = 114/117 (97%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNR 60
+GFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVST+MHRTIVIRR YLHY+PKYNR
Sbjct: 40 LGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNR 99
Query: 61 YEKRHKNVPAHVSPAFRVQVGDIVTVGQCRPISKTVRFNVLKVASATGKANKQFAKF 117
YEKRHKNVP HVSPAFRVQVGDIVTVGQCRPISKTVRFNV+KV++A GKANKQFAKF
Sbjct: 100 YEKRHKNVPVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKVSAAAGKANKQFAKF 156
>SPAC31G5.03 [J] KOG1728 40S ribosomal protein S11
Length = 152
Score = 187 bits (474), Expect = 3e-48
Identities = 87/117 (74%), Positives = 101/117 (85%), Gaps = 1/117 (0%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNR 60
+GFKTP AI G Y+DKKCPF G VSIRG+ILTGTVVST+MHRTI+IRR+YLH++PKYNR
Sbjct: 37 LGFKTPAEAIYGEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNR 96
Query: 61 YEKRHKNVPAHVSPAFRVQVGDIVTVGQCRPISKTVRFNVLKVASATGKANKQFAKF 117
YEKRHKN+ AHVSPAFR+ GD+VTVGQCRP+SKTVRFNVL+V T + KQF KF
Sbjct: 97 YEKRHKNLAAHVSPAFRINEGDVVTVGQCRPLSKTVRFNVLRVVKHT-EGPKQFGKF 152
>SPAC144.11 [J] KOG1728 40S ribosomal protein S11
Length = 152
Score = 187 bits (474), Expect = 3e-48
Identities = 87/117 (74%), Positives = 101/117 (85%), Gaps = 1/117 (0%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNR 60
+GFKTP AI G Y+DKKCPF G VSIRG+ILTGTVVST+MHRTI+IRR+YLH++PKYNR
Sbjct: 37 LGFKTPAEAIYGEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNR 96
Query: 61 YEKRHKNVPAHVSPAFRVQVGDIVTVGQCRPISKTVRFNVLKVASATGKANKQFAKF 117
YEKRHKN+ AHVSPAFR+ GD+VTVGQCRP+SKTVRFNVL+V T + KQF KF
Sbjct: 97 YEKRHKNLAAHVSPAFRINEGDVVTVGQCRPLSKTVRFNVLRVVKHT-EGPKQFGKF 152
>Hs4506681 [J] KOG1728 40S ribosomal protein S11
Length = 158
Score = 179 bits (454), Expect = 6e-46
Identities = 87/118 (73%), Positives = 99/118 (83%), Gaps = 2/118 (1%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNR 60
+GFKTPK AIEG+YIDKKCPFTG VSIRG+IL+G V +M RTIVIRRDYLHY+ KYNR
Sbjct: 42 LGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNR 101
Query: 61 YEKRHKNVPAHVSPAFR-VQVGDIVTVGQCRPISKTVRFNVLKVASATGKANKQFAKF 117
+EKRHKN+ H+SP FR VQ+GDIVTVG+CRP+SKTVRFNVLKV A G KQF KF
Sbjct: 102 FEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAAG-TKKQFQKF 158
>At4g30800 [J] KOG1728 40S ribosomal protein S11
Length = 159
Score = 171 bits (433), Expect = 2e-43
Identities = 78/106 (73%), Positives = 92/106 (86%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNR 60
+GFKTP+ AIEG+YID+KCPFTG VSIRG+IL+GT S +M RTI++RRDYLH+V KY R
Sbjct: 41 LGFKTPREAIEGTYIDQKCPFTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRR 100
Query: 61 YEKRHKNVPAHVSPAFRVQVGDIVTVGQCRPISKTVRFNVLKVASA 106
YEKRH N+PAHVSP FRV+ GD VT+GQCRP+SKTVRFNVLKV A
Sbjct: 101 YEKRHSNIPAHVSPCFRVKEGDRVTIGQCRPLSKTVRFNVLKVIPA 146
>At3g48930 [J] KOG1728 40S ribosomal protein S11
Length = 160
Score = 168 bits (425), Expect = 1e-42
Identities = 75/106 (70%), Positives = 90/106 (84%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNR 60
+GFKTP+ AI+G+Y+DKKCPFTG VSIRG+IL GT S +M RTI++RRDYLH+V KY R
Sbjct: 41 LGFKTPREAIDGAYVDKKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQR 100
Query: 61 YEKRHKNVPAHVSPAFRVQVGDIVTVGQCRPISKTVRFNVLKVASA 106
YEKRH N+PAHVSP FRV+ GD + +GQCRP+SKTVRFNVLKV A
Sbjct: 101 YEKRHSNIPAHVSPCFRVKEGDHIIIGQCRPLSKTVRFNVLKVIPA 146
>CE05860 [J] KOG1728 40S ribosomal protein S11
Length = 155
Score = 167 bits (424), Expect = 2e-42
Identities = 79/118 (66%), Positives = 97/118 (81%), Gaps = 2/118 (1%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNR 60
+GFK P+ A+EG+YIDKKCP+ G V IRG ILTG V+ +M RTIV+RRDYLHY+ KY R
Sbjct: 39 LGFKAPRDAVEGTYIDKKCPWAGNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRR 98
Query: 61 YEKRHKNVPAHVSPAFR-VQVGDIVTVGQCRPISKTVRFNVLKVASATGKANKQFAKF 117
YEKRHKNVPAH SPAFR + GD+VT+G+CRP+SKTVRFNVLKV + +G + K F+KF
Sbjct: 99 YEKRHKNVPAHCSPAFRDIHPGDLVTIGECRPLSKTVRFNVLKV-NKSGTSKKGFSKF 155
>At5g23740 [J] KOG1728 40S ribosomal protein S11
Length = 159
Score = 166 bits (421), Expect = 4e-42
Identities = 79/113 (69%), Positives = 93/113 (81%), Gaps = 4/113 (3%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNR 60
+GFKTP+ AI+G+YID KCPFTG VSIRG+IL GT S +M RTI++RR+YLH+V KY R
Sbjct: 41 LGFKTPREAIDGAYIDSKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQR 100
Query: 61 YEKRHKNVPAHVSPAFRVQVGDIVTVGQCRPISKTVRFNVLKV----ASATGK 109
YEKRH N+PAHVSP FRV+ GD V +GQCRP+SKTVRFNVLKV ASA GK
Sbjct: 101 YEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGK 153
>7303497 [J] KOG1728 40S ribosomal protein S11
Length = 155
Score = 161 bits (408), Expect = 1e-40
Identities = 78/118 (66%), Positives = 96/118 (81%), Gaps = 2/118 (1%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNR 60
+GFKTP+ AI+G+YIDKKCP+TG V IRG+ILTG V +M RTIVIRRDYLH+V KY+R
Sbjct: 39 LGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSR 98
Query: 61 YEKRHKNVPAHVSPAFR-VQVGDIVTVGQCRPISKTVRFNVLKVASATGKANKQFAKF 117
+EKRH+N+ H SP FR V+ GDIVT+G+CRP+SKTVRFNVLKV+ G A K F K+
Sbjct: 99 FEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKVSKGQG-AKKSFKKY 155
>Hs17460599 [J] KOG1728 40S ribosomal protein S11
Length = 329
Score = 142 bits (358), Expect = 7e-35
Identities = 70/109 (64%), Positives = 83/109 (75%), Gaps = 2/109 (1%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNR 60
+GFKTP+ AIEG+YIDKKCPFTG SIRG+IL G V +M RT VI RDYLHY KYN
Sbjct: 202 LGFKTPEEAIEGTYIDKKCPFTGNASIRGRILFGMVTKMKMQRT-VICRDYLHYTCKYNH 260
Query: 61 YEKRHKNVPAHVSPAFR-VQVGDIVTVGQCRPISKTVRFNVLKVASATG 108
EK HKN+ ++SP FR +Q+ DI+TVG+C P+SK VRFNVLKV TG
Sbjct: 261 LEKHHKNMSVNLSPCFRDIQISDIITVGECWPLSKMVRFNVLKVTKTTG 309
>ECU04g0640 [J] KOG1728 40S ribosomal protein S11
Length = 156
Score = 105 bits (261), Expect = 1e-23
Identities = 48/96 (50%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 2 GFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNRY 61
GFK P+TA YIDKKCPFTG V++RG++ G V + +TIV+ +Y+HY KY RY
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRLFKGVVKKMKAEKTIVVVANYVHYSKKYKRY 97
Query: 62 EKRHKNVPAHVSPAFR--VQVGDIVTVGQCRPISKT 95
+RH N H+SP F + VGD V G+ RP+SKT
Sbjct: 98 SRRHTNFSVHMSPCFEGMINVGDTVICGETRPLSKT 133
>Hs22046070 [J] KOG1728 40S ribosomal protein S11
Length = 105
Score = 63.5 bits (153), Expect = 4e-11
Identities = 42/106 (39%), Positives = 49/106 (45%), Gaps = 48/106 (45%)
Query: 9 AIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNRYEKRHKNV 68
AIEG++IDKKCPFTG VSIRG
Sbjct: 45 AIEGAHIDKKCPFTGNVSIRGD-------------------------------------- 66
Query: 69 PAHVSPAFRVQVGDIVTVGQCRPISKTVRFNVLKVASATGKANKQF 114
VQ+ DIVTVG+C+P+SKTVRF+VLKV A KQF
Sbjct: 67 ---------VQISDIVTVGECQPLSKTVRFDVLKVTKA-ASTKKQF 102
>At1g49400 [J] KOG1740 Predicted mitochondrial/chloroplast ribosomal protein
S17
Length = 116
Score = 44.3 bits (103), Expect = 3e-05
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 30 KILTGTVVSTRMHRTIVIRRDYLHYVPKYNRYEKRHKNVPAHVSPAFRVQVGDIVTVGQC 89
K + GTVVS +M +++V+ D L + YNRY KR AH +GD V +
Sbjct: 2 KPVIGTVVSNKMQKSVVVAVDRLFHNKIYNRYVKRTSKFMAH-DDKDACNIGDRVKLDPS 60
Query: 90 RPISKTVRFNVLKV 103
RP+SK + V ++
Sbjct: 61 RPLSKNKHWIVAEI 74
>At1g79850 [J] KOG1740 Predicted mitochondrial/chloroplast ribosomal protein
S17
Length = 149
Score = 43.5 bits (101), Expect = 5e-05
Identities = 31/82 (37%), Positives = 41/82 (49%), Gaps = 2/82 (2%)
Query: 30 KILTGTVVSTRMHRTIVIRRDYLHYVPKYNRYEKRHKNVPAHVSPAFRVQVGDIVTVGQC 89
K + G VV +T+ + L PKY R + K AH P + +VGD+V + +
Sbjct: 51 KTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAH-DPDNQFKVGDVVRLEKS 109
Query: 90 RPISKTVRFNVLKV-ASATGKA 110
RPISKT F L V A A KA
Sbjct: 110 RPISKTKSFVALPVIARAARKA 131
>SPBC409.14c [J] KOG1740 Predicted mitochondrial/chloroplast ribosomal protein
S17
Length = 90
Score = 42.7 bits (99), Expect = 8e-05
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 34 GTVVSTRMHRTIVIRRDYLHYVPKYNRYEKRHKNVPAHVSPAFRVQVGDIVTVGQCRPIS 93
G V+S M +T +R + P +Y +++N V VGD VT+ CRP S
Sbjct: 7 GIVISRAMPKTAKVRVAKEKFHPVVKKYVTQYQNYM--VQDDLNCNVGDAVTIQPCRPRS 64
Query: 94 KTVRFNVLKVASATGK 109
T RF ++K+ S +
Sbjct: 65 ATKRFEIIKILSTANR 80
>At3g18880 [J] KOG1740 Predicted mitochondrial/chloroplast ribosomal protein
S17
Length = 105
Score = 42.4 bits (98), Expect = 1e-04
Identities = 25/65 (38%), Positives = 34/65 (51%), Gaps = 1/65 (1%)
Query: 30 KILTGTVVSTRMHRTIVIRRDYLHYVPKYNRYEKRHKNVPAHVSPAFRVQVGDIVTVGQC 89
K + GTVVS +M ++V+ D L + YNRY KR AH +GD V +
Sbjct: 2 KAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAH-DEKDSCNIGDRVKLDPS 60
Query: 90 RPISK 94
RP+SK
Sbjct: 61 RPLSK 65
>YHR033w [E] KOG1154 Gamma-glutamyl kinase
Length = 423
Score = 32.7 bits (73), Expect = 0.083
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 23 GLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNRYEKRHKNVPAHVSPAFRVQVGD 82
G +R K++ + S TIV++ D YVPK Y + H P H+ + Q D
Sbjct: 213 GTGGMRTKLIAADLASNAGIETIVMKSDRPEYVPKIVDYIQHHFRPPRHIGNGTQQQFLD 272
Query: 83 I 83
+
Sbjct: 273 L 273
>CE09880 [I] KOG1202 Animal-type fatty acid synthase and related proteins
Length = 2586
Score = 29.6 bits (65), Expect = 0.71
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 4 KTPKTAIEGSYIDKKC----PFTGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPK 57
+ P AI G++ D++C F+G + G L G + + + T+++ RDY VP+
Sbjct: 1645 RLPPDAIPGNFADRECLLGMEFSGRLK-DGTRLMGILPAQALATTVMVDRDYAWEVPR 1701
>SPAC1565.08 [O] KOG0730 AAA+-type ATPase
Length = 418
Score = 28.5 bits (62), Expect = 1.6
Identities = 13/28 (46%), Positives = 18/28 (63%)
Query: 77 RVQVGDIVTVGQCRPISKTVRFNVLKVA 104
RV++GDIVT+ C I R +VL +A
Sbjct: 113 RVRLGDIVTINPCPDIKYAERISVLPLA 140
>YDL126c [O] KOG0730 AAA+-type ATPase
Length = 835
Score = 28.1 bits (61), Expect = 2.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 77 RVQVGDIVTVGQCRPISKTVRFNVLKVA 104
R+++GD+VT+ C I R +VL +A
Sbjct: 103 RIRLGDLVTIHPCPDIKYATRISVLPIA 130
>Hs17476954 [C] KOG4075 Cytochrome c oxidase subunit IV/COX5b
Length = 149
Score = 27.3 bits (59), Expect = 3.5
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 22 TGLVSIRGKILTGTVVSTRMHRTIVIRRDYLHYVPKYNRYEKRHKNVP--AHV 72
T +VS+ GK T+VS R H +V DY +P Y ++R VP AHV
Sbjct: 4 TRVVSLVGKRAISTLVSVRAHGNVVKSDDYA--LPAY--VDRRDYPVPDVAHV 52
>Hs13787209 [A] KOG0331 ATP-dependent RNA helicase
Length = 715
Score = 26.6 bits (57), Expect = 6.0
Identities = 16/46 (34%), Positives = 25/46 (53%), Gaps = 2/46 (4%)
Query: 1 MGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTRMHRTIV 46
+G KT KTAI ++ KC +T ++ G ++ V S RTI+
Sbjct: 332 IGKKTQKTAITVEHLAIKCHWTQRAAVIGDVI--RVYSGHQGRTII 375
>YMR188c [J] KOG1740 Predicted mitochondrial/chloroplast ribosomal protein
S17
Length = 237
Score = 26.2 bits (56), Expect = 7.8
Identities = 22/85 (25%), Positives = 40/85 (46%), Gaps = 5/85 (5%)
Query: 34 GTVVST-RMHRTIVIRRDYLHYVPKYNRYEKRHKNVPAHVSPAFRVQVGDIVTVGQCRPI 92
G VVS +M +T+ +R + + K N+ ++ H + GD+V + RP+
Sbjct: 8 GLVVSQGKMQKTVKVRVETKVFNKKINKELFHRRDYLVHDEGEISRE-GDLVRIEATRPL 66
Query: 93 SKTVRFNVLKVASATGKANKQFAKF 117
SK F + ++ G +QFA +
Sbjct: 67 SKRKFFAIAEIIRNKG---QQFALY 88
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.324 0.138 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,609,687
Number of Sequences: 60738
Number of extensions: 238538
Number of successful extensions: 585
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 557
Number of HSP's gapped (non-prelim): 25
length of query: 117
length of database: 30,389,216
effective HSP length: 93
effective length of query: 24
effective length of database: 24,740,582
effective search space: 593773968
effective search space used: 593773968
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)