ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI2758 good J KOG2509 Translation, ribosomal structure and biogenesis Seryl-tRNA synthetase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI2758 925875 924499 -459
(459 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR023w [J] KOG2509 Seryl-tRNA synthetase 813 0.0
SPAC29A4.15 [J] KOG2509 Seryl-tRNA synthetase 678 0.0
At5g27470 [J] KOG2509 Seryl-tRNA synthetase 468 e-131
CE05445 [J] KOG2509 Seryl-tRNA synthetase 419 e-117
Hs16306548 [J] KOG2509 Seryl-tRNA synthetase 411 e-115
7295855 [J] KOG2509 Seryl-tRNA synthetase 400 e-111
ECU04g0750 [J] KOG2509 Seryl-tRNA synthetase 357 2e-98
At1g11870 [J] KOG2509 Seryl-tRNA synthetase 204 2e-52
SPAC25B8.06c [J] KOG2509 Seryl-tRNA synthetase 180 5e-45
7300003 [J] KOG2509 Seryl-tRNA synthetase 169 6e-42
YHR011w [J] KOG2509 Seryl-tRNA synthetase 169 8e-42
CE25136 [J] KOG2509 Seryl-tRNA synthetase 163 4e-40
Hs8923421 [J] KOG2509 Seryl-tRNA synthetase 153 5e-37
>YDR023w [J] KOG2509 Seryl-tRNA synthetase
Length = 462
Score = 813 bits (2101), Expect = 0.0
Identities = 388/458 (84%), Positives = 429/458 (92%)
Query: 1 MLDITQFIEEKGGNPELIRKSQIARGASVEIVDEIIAGYKEWVKTRFQVDELNKQLNKVQ 60
MLDI QFIE+KGGNPELIR+SQ AR ASVEIVDEII+ YK+WVKTRF++DELNK+ NK+Q
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60
Query: 61 KEIGLKFKNKEDASELLAEKDRIVAEKKVLSEREQEEDKQLRSKVNQVGNIVHPSVVVSN 120
K+IGLKFKNKEDAS LLAEK+++ +KK L+E+EQ+EDK L+ KV QVGNIVHPSVVVSN
Sbjct: 61 KDIGLKFKNKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVVSN 120
Query: 121 DEENNELVRSWMPENIKEVAQVATATGAEAKLSHHEILLRLDGYDPERGVKITGHRGYFF 180
DEENNELVR+W PE+++ V +A+ TG A LSHHEILLRLDGYDP+RGVKI GHRGYFF
Sbjct: 121 DEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGYFF 180
Query: 181 RNYGVFLNQALINYGLSFLASKGYTPLQAPVMMNKDVMAKTAQLSEFDEELYKVLDGDDE 240
RNYGVFLNQALINYGL FLA+KGY PLQAPVMMNK++M+KTAQLSEFDEELYKV+DG+DE
Sbjct: 181 RNYGVFLNQALINYGLQFLAAKGYIPLQAPVMMNKELMSKTAQLSEFDEELYKVIDGEDE 240
Query: 241 KYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGSHGKDAWGVFRVHAFEK 300
KYLIATSEQPISAYHSGEWFEKPQEQLP+ YVGYSSCFRREAGSHGKDAWGVFRVHAFEK
Sbjct: 241 KYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHAFEK 300
Query: 301 IEQFVLTEPEKSWEEFDKMINYSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPY 360
IEQFV+TEPEKSWEEF+KMI+YSEEFY+SL LPYR+VGIVSGELNNAAAKKYDLEAWFPY
Sbjct: 301 IEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAWFPY 360
Query: 361 QKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRALCCVLENYQ 420
QKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL ATQRALCC+LENYQ
Sbjct: 361 QKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILENYQ 420
Query: 421 TDEGLKVPEVLRKYIPGEPEFLPYVKELPKNSTSNKKK 458
T++GL VPEVLRKYIPGEPEFLP+V ELPKNSTS+K K
Sbjct: 421 TEDGLVVPEVLRKYIPGEPEFLPFVNELPKNSTSSKDK 458
>SPAC29A4.15 [J] KOG2509 Seryl-tRNA synthetase
Length = 450
Score = 678 bits (1749), Expect = 0.0
Identities = 325/461 (70%), Positives = 381/461 (82%), Gaps = 13/461 (2%)
Query: 1 MLDITQFIEEKGGNPELIRKSQIARGASVEIVDEIIAGYKEWVKTRFQVDELNKQLNKVQ 60
MLDI F EKGGNPE+IR+SQ RGA V +VD++I YKEWV RF++D NK +N+VQ
Sbjct: 1 MLDINLFQVEKGGNPEIIRESQRKRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQ 60
Query: 61 KEIGLKFKNKEDASELLAEKDRIVAEKKVLSEREQEEDKQLRSKVNQVGNIVHPSVVVSN 120
KEIGLK K KEDASELL EK+ + KK L E+E ++K++ + V+ +GNIVH SV VS
Sbjct: 61 KEIGLKMKAKEDASELLEEKNSLTERKKNLIEQETAKNKEMLNVVSSIGNIVHDSVPVSM 120
Query: 121 DEENNELVRSWMPENIKEVAQVATATGAEAK--LSHHEILLRLDGYDPERGVKITGHRGY 178
DE+NNE++R W PE + E K LSHHE+L RLDGYDPERGVK++GHRGY
Sbjct: 121 DEDNNEIIRKWAPEGVT----------VEKKNCLSHHEVLTRLDGYDPERGVKVSGHRGY 170
Query: 179 FFRNYGVFLNQALINYGLSFLASKGYTPLQAPVMMNKDVMAKTAQLSEFDEELYKVLDGD 238
F R YGVF N ALI YGL FL +GY LQAP M+NKDVMAKTAQL +FDEELYKV+DGD
Sbjct: 171 FLRQYGVFFNLALIQYGLDFLEKRGYIALQAPTMLNKDVMAKTAQLEQFDEELYKVIDGD 230
Query: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGSHGKDAWGVFRVHAF 298
+E+YLIATSEQPISAYHSGEWFEKP EQLP++Y GYS+C+RREAGSHG+DAWG+FRVHAF
Sbjct: 231 EERYLIATSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAF 290
Query: 299 EKIEQFVLTEPEKSWEEFDKMINYSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWF 358
EKIEQFVLT+PEKSWE F +MIN++E+FY+SL LPYR+V IVSG LNNAAAKKYDLEAWF
Sbjct: 291 EKIEQFVLTDPEKSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYDLEAWF 350
Query: 359 PYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRALCCVLEN 418
P+Q EYKELVSCSNCTDYQSRNLEIRCG+KKMGDREKKYVHCLNSTLCAT+RALCC+LEN
Sbjct: 351 PFQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCILEN 410
Query: 419 YQTDEGLKVPEVLRKYIPGEPEFLPYVKELPKNSTSNKKKN 459
YQT +G+ VP+VL+ Y+ G+ FLP+ KELPKNSTS K KN
Sbjct: 411 YQTPDGVNVPKVLQPYMGGK-TFLPFTKELPKNSTSKKGKN 450
>At5g27470 [J] KOG2509 Seryl-tRNA synthetase
Length = 451
Score = 468 bits (1203), Expect = e-131
Identities = 242/460 (52%), Positives = 315/460 (67%), Gaps = 15/460 (3%)
Query: 1 MLDITQFIEEKGGNPELIRKSQIARGASVEIVDEIIAGYKEWVKTRFQVDELNKQLNKVQ 60
MLDI F EEKG NPE+IR+SQ R ASVEIVDEII KEW + +F+VD K+ NK+
Sbjct: 1 MLDINLFREEKGNNPEIIRESQRRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLN 60
Query: 61 KEIGLKFKNKEDASELLAEKDRIVAEKKVLSEREQEEDKQLRSKVNQVGNIVHPSVVVSN 120
K++ KEDASE++ + ++ + +E L++K+ QVGN+VH SV V
Sbjct: 61 KQVAQLKIKKEDASEIIQQTEKNKQDSTAKEAEVREAYAALKAKLEQVGNLVHDSVPVDK 120
Query: 121 DEENNELVRSWMPENIKEVAQVATATGAEAKLSHHEILLRLDGY-DPERGVKITGHRGYF 179
DE NN +++ W + KL +H L+ L G D +RG +I G RG+F
Sbjct: 121 DEANNLVIKLWGEKRFSTPG---------LKLKNHVDLVELLGIADTKRGAEIAGARGFF 171
Query: 180 FRNYGVFLNQALINYGLSFLASKGYTPLQAPVMMNKDVMAKTAQLSEFDEELYKVLDGDD 239
+ G+ LNQALIN+GL+FL +G+T LQ P M KDVMAK AQL++FDEELYKV D
Sbjct: 172 LKGDGLMLNQALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGD 231
Query: 240 EKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGSHGKDAWGVFRVHAFE 299
+KYLIAT+EQP+ AYH EW + LP+RY GYSSCFR+EAGSHG+D G+FRVH FE
Sbjct: 232 DKYLIATAEQPLCAYHIDEWIHPTE--LPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFE 289
Query: 300 KIEQFVLTEPEK--SWEEFDKMINYSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAW 357
KIEQF +T P + SWE D+M+ SE+FYQ+L LPY++V IVSG LN+AAAKKYDLEAW
Sbjct: 290 KIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAW 349
Query: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRALCCVLE 417
FP + ++ELVSCSNCTDYQ+R LEIR G KK ++ K+YVH LNSTL AT+R +CC+LE
Sbjct: 350 FPSSETFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILE 409
Query: 418 NYQTDEGLKVPEVLRKYIPGEPEFLPYVKELPKNSTSNKK 457
NYQ ++G+ +PEVL+ ++ GE FLP+ + T KK
Sbjct: 410 NYQREDGVDIPEVLQPFMGGE-TFLPFKAKPVVADTKGKK 448
>CE05445 [J] KOG2509 Seryl-tRNA synthetase
Length = 487
Score = 419 bits (1078), Expect = e-117
Identities = 235/495 (47%), Positives = 310/495 (62%), Gaps = 53/495 (10%)
Query: 1 MLDITQFIEEKGGNPELIRKSQIARGASVEIVDEIIAGYKEWVKTRFQVDELNKQLNKVQ 60
+LDI F EKGGNPE+IRKSQ R ++VDE+I ++W K RF D+LN+Q N +
Sbjct: 2 VLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAIS 61
Query: 61 KEIGLKFKNKEDASELLAEKDRIVA---EKKV--LSEREQEEDKQLR------------- 102
K IG K K KE + D IVA E K+ LS+ + K+LR
Sbjct: 62 KAIGEKMKKKEPQGTDDSVADDIVARLAELKIDELSQLTVVQLKKLRVLVDEKSVQTAAA 121
Query: 103 ---------SKVNQVGNIVHPSVVVSNDEENNELVRSWMPENIKEVAQVATATGAEAKLS 153
K+ Q+GN++H SVVVS DE NN++ R++ + K+ K S
Sbjct: 122 VIANENARHEKLIQIGNLIHSSVVVSKDEANNKIERTFGDLSTKK------------KYS 169
Query: 154 HHEILLRLDGYDPERGVKITGHRGYFFRNYGVFLNQALINYGLSFLASKGYTPLQAPVMM 213
H ++++ +DG+D ERG + G RGYF + VFL QA+I L L KGY PL P M
Sbjct: 170 HVDLVVMVDGFDGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQRLNVKGYVPLYTPFFM 229
Query: 214 NKDVMAKTAQLSEFDEELYKV------LDGD---DEKYLIATSEQPISAYHSGEWFEKPQ 264
K+VM + AQLS+FD+ELYKV + GD DEKYLIATSEQPI+AYH EW + +
Sbjct: 230 RKEVMQEVAQLSQFDDELYKVSSKGSEIAGDTSVDEKYLIATSEQPIAAYHRNEWIK--E 287
Query: 265 EQLPVRYVGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVLTEPE--KSWEEFDKMINY 322
+LP++Y G S+CFR+E GSHG+D G+FRVH FEKIEQFVL P +SW FD+MI
Sbjct: 288 TELPIKYAGVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGN 347
Query: 323 SEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLE 382
+E +YQ L +PY+VV IVSGELNNAAAKK+DLEAWFP Y+ELVSCSNC DYQSR L+
Sbjct: 348 AESYYQELQIPYQVVNIVSGELNNAAAKKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLK 407
Query: 383 IRCGIKKMGDREKKYVHCLNSTLCATQRALCCVLENYQTDEGLKVPEVLRKYIP-GEPEF 441
+R G K E +VH LN+T+CAT R +C +LEN QT+EG+ VP +++++P F
Sbjct: 408 VRYGQTKKLSGEVPFVHMLNATMCATTRVICAILENNQTEEGINVPTAIQQWMPENYRTF 467
Query: 442 LPYVKELPKNSTSNK 456
+P+VK P + + K
Sbjct: 468 IPFVKPAPIDEDAKK 482
>Hs16306548 [J] KOG2509 Seryl-tRNA synthetase
Length = 514
Score = 411 bits (1057), Expect = e-115
Identities = 226/499 (45%), Positives = 316/499 (63%), Gaps = 57/499 (11%)
Query: 1 MLDITQFIEEKGGNPELIRKSQIARGASVEIVDEIIAGYKEWVKTRFQVDELNKQLNKVQ 60
+LD+ F +KGG+P LIR++Q R +VD+++ EW + RF+ D LNK N
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KEIGLKFKNKEDASE-------------LLAE-----------KDRIVAEKKVL---SER 93
K IG K K KE + L A+ K R++ ++ +L +ER
Sbjct: 62 KTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAER 121
Query: 94 EQEEDKQLRSKVNQVGNIVHPSVVVSNDEE-NNELVRSWMPENIKEVAQVATATGAEAKL 152
+ E ++ + + ++GN++HPSV +SNDE+ +N++ R W +++ K
Sbjct: 122 IKLEAERFEN-LREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRK------------KY 168
Query: 153 SHHEILLRLDGYDPERGVKITGHRGYFFRNYGVFLNQALINYGLSFLASKGYTPLQAPVM 212
SH ++++ +DG++ E+G + G RGYF + VFL QALI Y L L S+GY P+ P
Sbjct: 169 SHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFF 228
Query: 213 MNKDVMAKTAQLSEFDEELYKVL---------DGDDEKYLIATSEQPISAYHSGEWFEKP 263
M K+VM + AQLS+FDEELYKV+ + DEKYLIATSEQPI+A H EW
Sbjct: 229 MRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRP- 287
Query: 264 QEQLPVRYVGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVLTEPE--KSWEEFDKMIN 321
E LP++Y G S+CFR+E GSHG+D G+FRVH FEKIEQFV + P KSWE F++MI
Sbjct: 288 -EDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIT 346
Query: 322 YSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNL 381
+EEFYQSLG+PY +V IVSG LN+AA+KK DLEAWFP ++ELVSCSNCTDYQ+R L
Sbjct: 347 TAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRL 406
Query: 382 EIRCG-IKKMGDREKKYVHCLNSTLCATQRALCCVLENYQTDEGLKVPEVLRKYI-PGEP 439
IR G KKM D+ ++VH LN+T+CAT R +C +LENYQT++G+ VPE L++++ PG
Sbjct: 407 RIRYGQTKKMMDK-VEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPGLQ 465
Query: 440 EFLPYVKELPKNSTSNKKK 458
E +P+VK P +KK+
Sbjct: 466 ELIPFVKPAPIEQEPSKKQ 484
>7295855 [J] KOG2509 Seryl-tRNA synthetase
Length = 501
Score = 400 bits (1028), Expect = e-111
Identities = 223/493 (45%), Positives = 295/493 (59%), Gaps = 62/493 (12%)
Query: 1 MLDITQFIEEKGGNPELIRKSQIARGASVEIVDEIIAGYKEWVKTRFQVDELNKQLNKVQ 60
+LD+ F +KGGNP+L+R++Q R V +V+ +IA EW + R + D LNK N
Sbjct: 2 VLDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVCS 61
Query: 61 KEIGLKFKNKE---------------DASELLAEK-----------------DRIVAEKK 88
K IG K K KE D +E++AE D + +K
Sbjct: 62 KVIGEKMKKKEPVGAMSEDLPADVTKDLTEIVAETLQPLTVNQIKQLRVLIDDAMTENQK 121
Query: 89 VLSEREQEEDKQLRSKVNQVGNIVHPSVVVSNDEENNELVRSWMPENIKEVAQVATATGA 148
L EQ + LR +VGN +H SV VSNDE+ N + R++
Sbjct: 122 SLELAEQTRNTSLR----EVGNHLHESVPVSNDEDENRVERTFGD------------CEK 165
Query: 149 EAKLSHHEILLRLDGYDPERGVKITGHRGYFFRNYGVFLNQALINYGLSFLASKGYTPLQ 208
K SH ++++ +DG + E+G ++G RGYF VFL QALI + L L ++ Y PL
Sbjct: 166 RGKYSHVDLIVMIDGMNAEKGAVVSGGRGYFLTGAAVFLEQALIQHALHLLYARDYVPLY 225
Query: 209 APVMMNKDVMAKTAQLSEFDEELYKVLD---------GDDEKYLIATSEQPISAYHSGEW 259
P M K+VM + AQLS+FDEELYKV+ G DEKYLIATSEQPI+AYH EW
Sbjct: 226 TPFFMRKEVMQEVAQLSQFDEELYKVVGKGSEKAEEVGIDEKYLIATSEQPIAAYHRDEW 285
Query: 260 FEKPQEQLPVRYVGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVLTEPE--KSWEEFD 317
P+ LP++Y G S+CFR+E GSHG+D G+FRVH FEK+EQFVLT P KSWE D
Sbjct: 286 L--PESSLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMD 343
Query: 318 KMINYSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQ 377
+MI +E+F QSLG+PYRVV IVSG LN+AA+KK DLEAWF Y+ELVSCSNC DYQ
Sbjct: 344 EMIGNAEQFCQSLGIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQ 403
Query: 378 SRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRALCCVLENYQTDEGLKVPEVLRKYIPG 437
+R L +R G K + YVH LN+T+CA R +C +LE +QT+ G+KVPE L+KY+P
Sbjct: 404 ARRLLVRFGQTKKMNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKKYMPA 463
Query: 438 E-PEFLPYVKELP 449
+ + +P+VK P
Sbjct: 464 KFQDEIPFVKPAP 476
>ECU04g0750 [J] KOG2509 Seryl-tRNA synthetase
Length = 429
Score = 357 bits (917), Expect = 2e-98
Identities = 196/401 (48%), Positives = 267/401 (65%), Gaps = 23/401 (5%)
Query: 43 VKTRFQVDELNKQLNKVQKEIGLKF---KNKEDA--SELLAEKDRIVAEKKVLSEREQEE 97
++ F++D++N ++N++ +EI + KNKED SE +AE + E K L + +
Sbjct: 41 IEMNFRLDQINTRINQLNREIKSGYRQGKNKEDGDLSEKVAEIKGLSDEAKGLRDDVKAV 100
Query: 98 DKQLRSKVNQVGNIVHPSVVVSNDEENNELVRSWMPENIKEVAQVATATGAEAKLSHHEI 157
+ +L + +GNI+ PSVVVSNDE++N +VRS+ + K
Sbjct: 101 EDELNKVMKGIGNIISPSVVVSNDEKDNPIVRSYRSSRNMQ------------KNPRPFC 148
Query: 158 LLRLDGYDPERGVKITGHRGYFFRNYGVFLNQALINYGLSFLASKGYTPLQAPVMMNKDV 217
+L D G K+ GHRGY+ L QAL Y + FL +KGYT +Q PVM+ +DV
Sbjct: 149 VLMKDFTHSVAGAKVMGHRGYYLSGKMARLAQALTRYAIDFLENKGYTYIQTPVMLRRDV 208
Query: 218 MAKTAQLSEFDEELYKVLDGDDEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSC 277
M KT+QLS+FD++LYKV +D+ YLIATSEQ ++A + E PQE +P ++ G S C
Sbjct: 209 MRKTSQLSDFDDQLYKV---EDDLYLIATSEQSLAALYMDERMV-PQE-VPKKFCGQSLC 263
Query: 278 FRREAGSHGKDAWGVFRVHAFEKIEQFVLTEPEKSWEEFDKMINYSEEFYQSLGLPYRVV 337
FR+EAG+HGKD G+FRVH FEKIEQFV+ PE+S + ++MI EEFYQSL + Y VV
Sbjct: 264 FRKEAGAHGKDNAGLFRVHQFEKIEQFVICGPEESQKYHEEMIKACEEFYQSLDISYNVV 323
Query: 338 GIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKY 397
GIVSGELN+AAA KYDLEA+FP ++Y+ELVSCSNCTDYQSR LEIR G+ K +R K Y
Sbjct: 324 GIVSGELNDAAAIKYDLEAYFPSAEKYRELVSCSNCTDYQSRELEIRYGVVKENNR-KIY 382
Query: 398 VHCLNSTLCATQRALCCVLENYQTDEGLKVPEVLRKYIPGE 438
VH LN T+CA QRALCC++ENYQT +G+ +P+VL+ Y G+
Sbjct: 383 VHLLNGTMCAVQRALCCIVENYQTGDGIAIPDVLQGYFGGD 423
>At1g11870 [J] KOG2509 Seryl-tRNA synthetase
Length = 512
Score = 204 bits (520), Expect = 2e-52
Identities = 134/424 (31%), Positives = 212/424 (49%), Gaps = 40/424 (9%)
Query: 32 VDEIIAGYKEWVKTRFQVDELNKQLNKVQKEIGLKFKNKEDASELLAEKDRIVAEKKVLS 91
++ ++ Y+ V + +V+ L ++ N V K K K K + SE ++R+V E K L
Sbjct: 102 LEAVLQLYENMVNLQKEVERLREERNNVAK----KMKGKLEPSE----RERLVEEGKNLK 153
Query: 92 ER--EQEED-----KQLRSKVNQVGNIVHPSVVVSNDEENNELVRSWMPENIKEVAQVAT 144
E EED +L+ + N+ HP V V ++ + P +
Sbjct: 154 ESLVTLEEDLVKLKDELQHVAQSIPNMTHPDVPVGGEDSSAIRQEVGSPREFSFPIK--- 210
Query: 145 ATGAEAKLSHHEILLRLDGYDPERGVKITGHRGYFFRNYGVFLNQALINYGLSFLASKGY 204
H ++ LD D + +++G + ++ +N V L AL+N+ LS + KGY
Sbjct: 211 --------DHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLLEMALLNWTLSQVMKKGY 262
Query: 205 TPLQAPVMMNKDVMAKTAQLSEFDEELYKVLDGDDEKYLIATSEQPISAYHSGEWFEKPQ 264
TPL P ++ ++ K D +DG D+ LI T+E P+ H +
Sbjct: 263 TPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTDQ-CLIGTAEIPVGGIHMDSILL--E 319
Query: 265 EQLPVRYVGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVLTEPEKSWEEFDKMINYSE 324
LP++Y+ +S CFR EAG+ G G++RVH F K E FV+ +PE S ++I E
Sbjct: 320 SALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQPEDSESFHQELIQIEE 379
Query: 325 EFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIR 384
+ + SLGL ++ + + + +L A +K+D+EAW P + E+ S SNCTDYQSR L IR
Sbjct: 380 DLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMPGLGRFGEISSASNCTDYQSRRLGIR 439
Query: 385 --------CGIK--KMGDREKKYVHCLNSTLCATQRALCCVLENYQTDEG-LKVPEVLRK 433
G K K K+VH LN+T CA R + C+LENYQ ++G + +PE LR
Sbjct: 440 YRPSEPPQTGPKKGKANLPATKFVHTLNATACAVPRMMVCLLENYQQEDGSVVIPEPLRP 499
Query: 434 YIPG 437
++ G
Sbjct: 500 FMGG 503
>SPAC25B8.06c [J] KOG2509 Seryl-tRNA synthetase
Length = 454
Score = 180 bits (456), Expect = 5e-45
Identities = 133/446 (29%), Positives = 226/446 (49%), Gaps = 51/446 (11%)
Query: 14 NPELIRKSQIARG--ASVEIVDEI--IAGYKEWVKTRFQVDELNKQLNKVQKEIGLKFKN 69
N E ++++ I R A E V +I + KE +K F L ++KEI L+ +
Sbjct: 33 NAEAVQRNCINRNLQAIAETVPKIRSLIDEKESLKNEFF------PLLSLKKEITLQIER 86
Query: 70 KEDASELLAEKDRIVAEKKVLSEREQEEDKQLRSKVNQ-------VGNIVHPSVVVSNDE 122
D +E + ++V E K L ++ +E +K + N V N P+V V ++
Sbjct: 87 CSDPNE----RGKLVNEAKGLKKKTEEYNKIISKVTNDLYQYCLAVPNTTLPTVPVGPED 142
Query: 123 ENNELVRSWMPENIKEVAQVATATGAEAKLSHHEILLRLDGYDPERGVKITGHRGYFFRN 182
+ + + P + TG+ L H + + +G + E + +GH +
Sbjct: 143 KAVVVQKIGSP--------LVKKTGS---LKDH-LQIANEGINLEDAAQASGHSFCYTTG 190
Query: 183 YGVFLNQALINYGLSFLASKGYTPLQAPVMMNKDVMAKTAQLSEFDEELYKVLDGDD--- 239
L A+ NY + F SKG+ P+ P ++ D+ A DEE ++ + D
Sbjct: 191 DIALLEMAITNYAMDFAISKGWCPVIPPTIVRTDI-ALACGFQPRDEEGQQIYELDSYTS 249
Query: 240 ------EKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGSHGKDAWGVF 293
++ LI T+E ++A + F E+ + VG S +RREAG+ GK+ G++
Sbjct: 250 PLVSSPKQCLIGTAEISLAALGFKKTFNNFTER---KVVGVSRAYRREAGARGKENRGLY 306
Query: 294 RVHAFEKIEQFVLTEPEKSWEEFDKMINYSEEFYQSLGLPYRVVGIVSGELNNAAAKKYD 353
R+H F K+E F T P +S E F++++N+ +EF ++L +P R++ + + EL ++A++KYD
Sbjct: 307 RLHEFTKVELFAWTHPSRSSEMFNEIVNFQKEFVETLKIPARILNMPTAELGSSASQKYD 366
Query: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRALC 413
+EAW P ++ Y E+ S SNC +YQ+R L R D++ +VH LN T A R +
Sbjct: 367 IEAWMPARQSYGEITSASNCLEYQARRLLTR----YRNDKDSGFVHTLNGTAAAIPRLII 422
Query: 414 CVLENYQTDEG-LKVPEVLRKYIPGE 438
+LEN+Q ++G +KVPE L YI E
Sbjct: 423 AILENHQQEDGTVKVPETLVPYIHKE 448
>7300003 [J] KOG2509 Seryl-tRNA synthetase
Length = 417
Score = 169 bits (429), Expect = 6e-42
Identities = 109/367 (29%), Positives = 192/367 (51%), Gaps = 31/367 (8%)
Query: 90 LSEREQEEDKQLRSKVNQVGNIVHPSVVVSNDEENNELV----RSWMPEN-IKEVAQVAT 144
L +Q + +QL++++ Q+ N HP + EE EL R P++ +KE +++A
Sbjct: 67 LDAGDQHKLRQLQAELEQLPNATHPRLR-DYGEEPRELAQYVHRQLTPQSRLKEFSELAR 125
Query: 145 ATGAEAKLSHHEILLRLDGYDPERGVKITGHRGYFFRNYGVFLNQALINYGLSFLASKGY 204
A L R+D TGH+ Y+ L QA+I Y L + G+
Sbjct: 126 ALN----------LYRMDHLG-----NYTGHKSYYLTGQLATLEQAIIQYALQAVTEHGF 170
Query: 205 TPLQAPVMMNKDVMAKTAQLSEFDE-ELYKVLDGDDEKYLIATSEQPISAYHSGEWFEKP 263
+ P ++ K+V+ +E + ++YK+ D + L TSE ++ + + +
Sbjct: 171 KLISVPDILPKEVIESCGMRTEGERTQVYKL---DTGECLSGTSEMALAGFFANKLLS-- 225
Query: 264 QEQLPVRYVGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVLTEPEKSWEEFDKMINYS 323
++QLP++ S C+R E ++ G++RVH F K+E F + E+S E ++ N
Sbjct: 226 EDQLPLKVTAVSRCYRAETSGLQEEK-GIYRVHQFNKVEMFAICTEEQSEAELEEFKNIE 284
Query: 324 EEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEI 383
+ ++ LGL +R++ + EL A +KYD+EAW P ++ + E+ SCSNCTDYQ+R L I
Sbjct: 285 VDLFRRLGLNFRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGI 344
Query: 384 RCGIKKMGDREKKYVHCLNSTLCATQRALCCVLENYQTDEGLKVPEVLRKYIPGEPEFLP 443
R ++ D + + H +N T A R L +LE+YQ ++G+++P VLR ++ + E +
Sbjct: 345 R--YRRSADGQILHAHTINGTATAIPRLLIALLESYQKEDGIEIPAVLRPFMDNQ-ELIT 401
Query: 444 YVKELPK 450
K +P+
Sbjct: 402 RNKRIPE 408
>YHR011w [J] KOG2509 Seryl-tRNA synthetase
Length = 446
Score = 169 bits (428), Expect = 8e-42
Identities = 122/428 (28%), Positives = 208/428 (48%), Gaps = 26/428 (6%)
Query: 14 NPELIRKSQIARGASVEIVDEIIAGYKEWVKTRFQVDELNKQLNKVQKEIGLKFKNKEDA 73
N ELI I R S++++ E KE K + ++ Q ++ +I K+K
Sbjct: 39 NRELIEADSIIR--SLQLLGERYQNIKEIDKV---IADIQIQRKSIEAQIK---KDKTKI 90
Query: 74 SELLAEKDRIVAEKKVLSEREQEEDKQLRSKVNQVGNIVHPSVVVSNDEENNELVRSWMP 133
+E A + + + + E K++ + N + P+V + + + W
Sbjct: 91 TEYSAALKALKEQYNDQNSKSSELKKKILETCKSLPNTLDPTVPLDAPQ-----IEQW-- 143
Query: 134 ENIKEVAQVATATGAEAKLSHHEILLRLDGYDPERGVKITGHRGYFFRNYGVFLNQALIN 193
+ + T +EA+ +H +I+L+ + D + +TG Y+ N G L QAL+
Sbjct: 144 -----INPLKTHKTSEAQ-AHVDIMLKKNMLDLQTASNVTGMSWYYLLNDGARLEQALVA 197
Query: 194 YGLSFLASKGYTPLQAPVMMNKDVM-AKTAQLSEFDEELYKVLDGDDEKYLIATSEQPIS 252
Y L G++ P + K+++ A + + E D L+AT+E P++
Sbjct: 198 YALKKANENGFSSCVPPSITKKELIDACGFNPRDMNNERQIYALQDTNLGLVATAEIPLA 257
Query: 253 AYHSGEWFEKPQEQLPVRYVGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVLTEPEKS 312
+ + E + + VG S C+R EAG+ GKD G++RVH F K+E F ++PE S
Sbjct: 258 GLGANKVLELNSGECSKKLVGVSRCYRAEAGARGKDTKGLYRVHEFTKVELFCWSKPETS 317
Query: 313 WEEFDKMINYSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSN 372
+ +++ + + LG+P +V+ + S +L N A KKYD+EAW P + ++ E+ S SN
Sbjct: 318 AKVLEEIKQFQISVVEELGIPAKVLNMPSNDLGNPAFKKYDIEAWMPGRGKFGEISSASN 377
Query: 373 CTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRALCCVLEN-YQTDEG-LKVPEV 430
CTD+QSR L + G E YVH LN T A R + ++EN Y G + VPE
Sbjct: 378 CTDFQSRRLNTKYRDDNTGKLE--YVHTLNGTAMAIPRVIVALVENFYDPSTGKISVPEC 435
Query: 431 LRKYIPGE 438
LR+++ G+
Sbjct: 436 LREFMNGQ 443
>CE25136 [J] KOG2509 Seryl-tRNA synthetase
Length = 441
Score = 163 bits (413), Expect = 4e-40
Identities = 99/266 (37%), Positives = 149/266 (55%), Gaps = 9/266 (3%)
Query: 173 TGHRGYFFRNYGVFLNQALINYGLSFLASKGYTPLQAPVMMNKDVMAKTAQLSEFDEELY 232
+G R Y F L +AL++Y + + G+ P+ P +++ +V + D +
Sbjct: 166 SGQRSYVFLGALASLEKALLDYAHERVCALGFRPITVPDIVSGEVTQACGVMQRSDHPIQ 225
Query: 233 KVLDGDDEKY-LIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGSHGKDAWG 291
L G++ L T+E I+A+ G F Q+QLP+R V S CFR E +A
Sbjct: 226 YTLAGEESHTKLSGTAEMGIAAFLRGRTFN--QDQLPIRLVSLSRCFRTEISKSASEA-K 282
Query: 292 VFRVHAFEKIEQFVLTEPEKSWEEFDKMINYSEEFYQSLGLPYRVVGIVSGELNNAAAKK 351
++RVH F K+E FV++ PE+S E D ++ + +Q+LG+ R + + S EL +AA+K
Sbjct: 283 LYRVHEFSKVEMFVVSTPEQSAAELDYLVEVQKGTFQALGVHCRQLEMPSEELGASAARK 342
Query: 352 YDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRA 411
+D+EAW P +K Y E+ S SNCTD+QSR L I+ K D KY H N T A+ RA
Sbjct: 343 FDIEAWMPGRKLYGEVSSASNCTDFQSRRLGIK---YKTADGTTKYAHTCNGTALASTRA 399
Query: 412 LCCVLENYQTD-EGL-KVPEVLRKYI 435
L VLE +Q D +GL ++PE LRK +
Sbjct: 400 LISVLETFQNDKKGLGELPEPLRKRV 425
>Hs8923421 [J] KOG2509 Seryl-tRNA synthetase
Length = 518
Score = 153 bits (387), Expect = 5e-37
Identities = 130/461 (28%), Positives = 221/461 (47%), Gaps = 60/461 (13%)
Query: 2 LDITQFIE--EKGGNPELIRKSQIARGASVEIVDEIIAGYKEWVKTRFQVDELNKQLNKV 59
LDI +F E+ + +RK ++ R A + II+ ++E + + Q+ L ++ V
Sbjct: 58 LDIERFCACPEEAAHALELRKGEL-RSADLPA---IISTWQELRQLQEQIRSLEEEKAAV 113
Query: 60 QKEIGLKFKNKEDASEL--------LAEKDRIVAEKKV-LSEREQEEDKQLRSKVNQVGN 110
+ + N +D+ E+ L + R + ++ V L RE + ++Q + ++ N
Sbjct: 114 TEAVRALLAN-QDSGEVQQDPKYQGLRARGREIRKELVHLYPREAQLEEQFYLQALKLPN 172
Query: 111 IVHPSVVVSNDEENNELVRSWMPENIKEVAQVATATGAEAKLS-----HHEILLRLDGYD 165
HP V V ++ + A+V G + S H EI +LD
Sbjct: 173 QTHPDVPVGDESQ----------------ARVLHMVGDKPVFSFQPRGHLEIGEKLDIIR 216
Query: 166 PERGVKITGHRGYFFRNYGVFLNQALINYGLSFLASKGYTPLQAPVMMNKDVM------- 218
+R ++GHR Y+ R G L L+N+ + L +G+TP+ P ++ V
Sbjct: 217 QKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVFEGCGMTP 276
Query: 219 -AKTAQLSEFDEELYKVLDGDDEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSC 277
A +Q+ D +K L+ L T+E ++ Y LPVR V S+C
Sbjct: 277 NANPSQIYNIDPARFKDLN------LAGTAEVGLAGYFMDHTVAF--RDLPVRMVCSSTC 328
Query: 278 FRREAGSHGKDAWGVFRVHAFEKIEQFVLTEP--EKSWEEFDKMINYSEEFYQSLGLPYR 335
+R E + G++ G++RVH F K+E F +T P E+S + ++ ++ E LGL +R
Sbjct: 329 YRAETNT-GQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFR 387
Query: 336 VVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREK 395
V+ + + EL A +K+D+EAW P + + E+ S SNCTD+QSR L I + + E
Sbjct: 388 VLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHI---MFQTEAGEL 444
Query: 396 KYVHCLNSTLCATQRALCCVLE-NYQTDEGLKVPEVLRKYI 435
++ H +N+T CA R L +LE N Q D + VP L+ Y+
Sbjct: 445 QFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYL 485
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.134 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,702,780
Number of Sequences: 60738
Number of extensions: 1283915
Number of successful extensions: 4205
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4149
Number of HSP's gapped (non-prelim): 13
length of query: 459
length of database: 30,389,216
effective HSP length: 110
effective length of query: 349
effective length of database: 23,708,036
effective search space: 8274104564
effective search space used: 8274104564
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)