ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI2804 good J KOG2102 Translation, ribosomal structure and biogenesis Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI2804 938712 941735 1008
(1008 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOL021c [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subun... 1528 0.0
SPBC26H8.10 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex s... 987 0.0
Hs19923416 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex su... 720 0.0
7301148 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subun... 717 0.0
At2g17510 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex sub... 676 0.0
CE05214 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subun... 550 e-156
Hs19115966 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex su... 416 e-116
ECU03g0700 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex su... 384 e-106
SPAC2C4.07c [J] KOG2102 Exosomal 3'-5' exoribonuclease complex s... 303 1e-81
CE02758 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subun... 293 9e-79
Hs22045556 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex su... 283 1e-75
At1g77680 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex sub... 235 2e-61
7291934 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subun... 176 2e-43
SPCC16C4.09 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex s... 148 4e-35
YDR293c [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subun... 139 2e-32
SPBC609.01 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex su... 120 1e-26
Hs21703358_2 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex ... 76 3e-13
Hs14769950_2 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex ... 76 3e-13
At5g02250 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex sub... 57 1e-07
>YOL021c [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit Rrp44/Dis3
Length = 1001
Score = 1528 bits (3957), Expect = 0.0
Identities = 761/1006 (75%), Positives = 861/1006 (84%), Gaps = 18/1006 (1%)
Query: 8 RRKRISDGLTVTQKVFVRSRNGSAQKVVREHYLRKDIPCLSRICDICPNIIVPNAAGELP 67
RRKR++DGL+VTQKVFVRSRNG A K+VREHYLR DIPCLSR C CP I+VP+A ELP
Sbjct: 9 RRKRLADGLSVTQKVFVRSRNGGATKIVREHYLRSDIPCLSRSCTKCPQIVVPDAQNELP 68
Query: 68 KFVLSETPQELQG-LGKHYVVVDANIIIQSIDLLENPNCFFDVIVPQIVLDEVRNKSYPI 126
KF+LS++P EL +GKHYVV+D N+++Q+IDLLENPNCFFDVIVPQIVLDEVRNKSYP+
Sbjct: 69 KFILSDSPLELSAPIGKHYVVLDTNVVLQAIDLLENPNCFFDVIVPQIVLDEVRNKSYPV 128
Query: 127 YTRIRALCRDSEDDVKRFVVFHNEFSEYTFIDRTGNESINDRNDRAIRKTVEWYTNHLKG 186
YTR+R LCRDS DD KRF+VFHNEFSE+TF++R NE+INDRNDRAIRKT +WY+ HLK
Sbjct: 129 YTRLRTLCRDS-DDHKRFIVFHNEFSEHTFVERLPNETINDRNDRAIRKTCQWYSEHLKP 187
Query: 187 KGINIVFVTNDRLNRQAALKD---SLVAKSLAEYVDMLPNSEEIKDLIPNLAPISGMSSK 243
IN+V VTNDRLNR+AA K+ +++ KSL +Y+++LPN+++I+D IP + K
Sbjct: 188 YDINVVLVTNDRLNREAATKEVESNIITKSLVQYIELLPNADDIRDSIPQMDSFD----K 243
Query: 244 MLEDDPEGHGAAKAEFSFPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSLPTFKK 303
LE D ++F+FPEYYST+R+MGGLKNG LYQG+IQISEYNFLEG+VSLP F K
Sbjct: 244 DLERD------TFSDFTFPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSK 297
Query: 304 PVLVLGQKNLNRAFNGDLVVVELLPQSEWKAPSTVTMDSEHFNVXXXXXXXXXXXXXXXS 363
PVL++GQKNLNRAFNGD V+VELLPQSEWKAPS++ +DSEHF+V
Sbjct: 298 PVLIVGQKNLNRAFNGDQVIVELLPQSEWKAPSSIVLDSEHFDVNDNPDIEAGDDDDNNE 357
Query: 364 GVLDDSGAIMSDKDRRLLAQSAILAQKSNKVQPTARVVGITRRSWRQYVGQITPTSVDPQ 423
+ ++SDK RRLLA+ A++AQ+S K+QPTA+VV I RRSWRQYVGQ+ P+SVDPQ
Sbjct: 358 S--SSNTTVISDKQRRLLAKDAMIAQRSKKIQPTAKVVYIQRRSWRQYVGQLAPSSVDPQ 415
Query: 424 SSGTQNVFVILMDKCLPKIRIRTRLAKQLLNKRIVISVDCWPENYRYPLGHFVRDLGDIE 483
SS TQNVFVILMDKCLPK+RIRTR A +LL+KRIVIS+D WP ++YPLGHFVRDLG IE
Sbjct: 416 SSSTQNVFVILMDKCLPKVRIRTRRAAELLDKRIVISIDSWPTTHKYPLGHFVRDLGTIE 475
Query: 484 SAQAETEALLLEHDVEYRPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRNDPLLPSRKDFR 543
SAQAETEALLLEHDVEYRPFSKKVL+CLP EGHDWKAP L DPEA+ DPLL RKD R
Sbjct: 476 SAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLR 535
Query: 544 DKLICSIDPPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVY 603
DKLICSIDPPGCVDIDDALHAK+LPNGNWEVGVHIADVTHFVKPGTALDAEGA+RGTSVY
Sbjct: 536 DKLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVY 595
Query: 604 LVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVVWELDNDANIVGVDFTKSVIRSREAFSYE 663
LVDKRIDMLPMLLGTDLCSLKPYVDRFAFSV+WELD+ ANIV V+F KSVIRSREAFSYE
Sbjct: 596 LVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYE 655
Query: 664 KAQNRIDDETAKDELTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKVHMDSETSDPNEV 723
+AQ RIDD+T DELT+GMRA RL+AGALNLASPEVKVHMDSETSDPNEV
Sbjct: 656 QAQLRIDDKTQNDELTMGMRALLKLSVKLKQKRLEAGALNLASPEVKVHMDSETSDPNEV 715
Query: 724 EIKKLLDTNSLVEEFMLLANISVARKIYEAFPQTAMLRRHAAPPSTNFELLNEMLQVRKG 783
EIKKLL TNSLVEEFMLLANISVARKIY+AFPQTAMLRRHAAPPSTNFE+LNEML RK
Sbjct: 716 EIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTNFEILNEMLNTRKN 775
Query: 784 MSISLESSKALADSLDRCEDPNDSYLNTLIRIMSTRCMMAAQYFHAGAFSYADFRHYGLA 843
MSISLESSKALADSLDRC DP D Y NTL+RIMSTRCMMAAQYF++GA+SY DFRHYGLA
Sbjct: 776 MSISLESSKALADSLDRCVDPEDPYFNTLVRIMSTRCMMAAQYFYSGAYSYPDFRHYGLA 835
Query: 844 VDIYTHFTSPIRRYCDVVAHRQLAGAIGYEALDLSHRDKQKMEMICRNINKKHRNAQFAG 903
VDIYTHFTSPIRRYCDVVAHRQLAGAIGYE L L+HRDK KM+MICRNIN+KHRNAQFAG
Sbjct: 836 VDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNKMDMICRNINRKHRNAQFAG 895
Query: 904 RASIEYYVGQVMRNNESTETGYVIKVFNNGIAVLVPKFGVEGLIRLENLTENPQSAEFIE 963
RASIEYYVGQVMRNNESTETGYVIKVFNNGI VLVPKFGVEGLIRL+NLTE+P SA F E
Sbjct: 896 RASIEYYVGQVMRNNESTETGYVIKVFNNGIVVLVPKFGVEGLIRLDNLTEDPNSAAFDE 955
Query: 964 DQFSLRFVDKNG-VSKEVSVFDKVEVQLKSVLDPATSKRKAQLLLK 1008
++ L FV N ++V VFDKVEVQ++SV+DP TSKRKA+LLLK
Sbjct: 956 VEYKLTFVPTNSDKPRDVYVFDKVEVQVRSVMDPITSKRKAELLLK 1001
>SPBC26H8.10 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit Rrp44/Dis3
Length = 970
Score = 987 bits (2552), Expect = 0.0
Identities = 512/1012 (50%), Positives = 690/1012 (67%), Gaps = 49/1012 (4%)
Query: 1 MATVQQLRRKRISDGLTVTQKVFVRSRNGSAQKVVREHYLRKDIPCLSRICDICPNIIVP 60
M+TV L+R + S+ +VFVR+ G QKVVRE YLR DIPC SR C +C + +
Sbjct: 1 MSTVSGLKRPQSSEK-NHRDRVFVRATRGKVQKVVREQYLRNDIPCQSRACPLCRSKLPK 59
Query: 61 NAAGELPKFVLSETPQELQGLGKHYVVVDANIIIQSIDLLENPNCFFDVIVPQIVLDEVR 120
++ G + + +LSE P L+ G HY++ D+NI ID LE+PN FFDVI+ Q V E+
Sbjct: 60 DSRGNVLEPILSEKPMFLEKFGHHYLIPDSNIFYHCIDALEHPNNFFDVIILQTVFSEIS 119
Query: 121 NKSYPIYTRIRALCRDSEDDVKRFVVFHNEFSEYTFIDRTGNESINDRNDRAIRKTVEWY 180
+KS P+Y R++ LC++ KRF F NEF TF++R +ES NDRNDRAIR W+
Sbjct: 120 SKSIPLYNRMKRLCQEK---TKRFTPFSNEFFVDTFVERLDDESANDRNDRAIRNAASWF 176
Query: 181 TNHLKGKGINIVFVTNDRLNRQAALKDSLVAKSLAEYVDMLPNSEEIKDLIPNLAPISGM 240
+HL GI IV +T+DR N + A + + +L +YV LP+SE + D++ +A
Sbjct: 177 ASHLASLGIKIVLLTDDRENARLAAEQGIQVSTLKDYVQYLPDSEILLDMVSAIADAIA- 235
Query: 241 SSKMLEDDPEGHGAAKAEFSFPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSLPT 300
S + +E + + ++S SR++ +KNG +++G I IS YN+LEG+V +P
Sbjct: 236 SKEQVESGTKN--------VYELHWSMSRLLACIKNGEVHKGLINISTYNYLEGSVVVPG 287
Query: 301 FKKPVLVLGQKNLNRAFNGDLVVVELLPQSEWKAPSTVTMDSEHFNVXXXXXXXXXXXXX 360
+ KPVLV G++NLNRA GD+V +++LPQ +WK + D + V
Sbjct: 288 YNKPVLVSGRENLNRAVQGDIVCIQILPQDQWKTEAEEIADDDEDVVV------------ 335
Query: 361 XXSGVLDDSGAIMSDKDRRLLAQSAILAQKSNKVQPTARVVGITRRSWRQYVGQITPTSV 420
S + A ++D + L K N PTA+VVGI +R+WR YVG + ++
Sbjct: 336 --STAAEPDSARINDLE---------LITKRN-AHPTAKVVGILKRNWRPYVGHVDNATI 383
Query: 421 DPQSSGTQNVFVIL-MDKCLPKIRIRTRLAKQLLNKRIVISVDCWPENYRYPLGHFVRDL 479
G+Q ++ MD+ +PKIR RTR A +L+ +RIV+++D W + RYP GHFVRDL
Sbjct: 384 AQSKGGSQQTVLLTPMDRRVPKIRFRTRQAPRLVGRRIVVAIDLWDASSRYPEGHFVRDL 443
Query: 480 GDIESAQAETEALLLEHDVEYRPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRNDPLLPSR 539
G++E+ +AETEALLLE+DV++RPF K VLDCLP+EGH+WK P D T P L +R
Sbjct: 444 GEMETKEAETEALLLEYDVQHRPFPKAVLDCLPEEGHNWKVPADKTHP-------LWKNR 496
Query: 540 KDFRDKLICSIDPPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASRG 599
KDFRDKLICSIDPPGC DIDDALHA LPNGN+EVGVHIADVTHFVKP T++D+E ASRG
Sbjct: 497 KDFRDKLICSIDPPGCQDIDDALHACVLPNGNYEVGVHIADVTHFVKPNTSMDSEAASRG 556
Query: 600 TSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVVWELDNDANIVGVDFTKSVIRSREA 659
T+VYLVDKRIDMLPMLLGTDLCSL+PYV+RFAFS +WE+D +ANI+ V FTKSVI S+EA
Sbjct: 557 TTVYLVDKRIDMLPMLLGTDLCSLRPYVERFAFSCIWEMDENANIIKVHFTKSVIASKEA 616
Query: 660 FSYEKAQNRIDDETAKDELTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKVHMDSETSD 719
FSY AQ RIDD+ +D LT GMR R+D GALNLASPEV++ D+ETSD
Sbjct: 617 FSYADAQARIDDQKMQDPLTQGMRVLLKLSKILKQKRMDEGALNLASPEVRIQTDNETSD 676
Query: 720 PNEVEIKKLLDTNSLVEEFMLLANISVARKIYEAFPQTAMLRRHAAPPSTNFELLNEMLQ 779
P +VEIK+LL+TNSLVEEFMLLANISVA+KIY+AFPQTA+LRRHAAPP TNF+ L ++L+
Sbjct: 677 PMDVEIKQLLETNSLVEEFMLLANISVAQKIYDAFPQTAVLRRHAAPPLTNFDSLQDILR 736
Query: 780 VRKGMSISLESSKALADSLDRCEDPNDSYLNTLIRIMSTRCMMAAQYFHAGAFSYADFRH 839
V KGM + ++SK+LA SLD C DP + Y NTL+RI++TRCM++A+YF +G F+ DFRH
Sbjct: 737 VCKGMHLKCDTSKSLAKSLDECVDPKEPYFNTLLRILTTRCMLSAEYFCSGTFAPPDFRH 796
Query: 840 YGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEALDLSHRDKQKMEMICRNINKKHRNA 899
YGLA IYTHFTSPIRRY DV+AHRQLA AI YE ++ S DK ++ IC IN +HR A
Sbjct: 797 YGLASPIYTHFTSPIRRYADVLAHRQLAAAIDYETINPSLSDKSRLIEICNGINYRHRMA 856
Query: 900 QFAGRASIEYYVGQVMRNNESTETGYVIKVFNNGIAVLVPKFGVEGLIRLENLTENPQ-S 958
Q AGRASIEYYVGQ ++ + E YVIKVF NG V + +FG+EG++ ++L+ + +
Sbjct: 857 QMAGRASIEYYVGQALKGGVAEEDAYVIKVFKNGFVVFIARFGLEGIVYTKSLSSVLEPN 916
Query: 959 AEFIEDQFSLRFVDKN---GVSKEVSVFDKVEVQLKSVLDPATSKRKAQLLL 1007
E++ED++ L ++ + ++ +F +V V++ +V D + K+K Q+ L
Sbjct: 917 VEYVEDEYKLNIEIRDQPKPQTVQIQMFQQVRVRVTTVRDEHSGKQKVQITL 968
>Hs19923416 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 958
Score = 720 bits (1858), Expect = 0.0
Identities = 414/977 (42%), Positives = 588/977 (59%), Gaps = 86/977 (8%)
Query: 25 RSRNGSAQKVVREHYLRKDIPCLSRICDICPNIIVPNAAGELPKFVLSET-PQELQGLGK 83
++R G K+VREHYLR DI C + C C A P+ S PQ
Sbjct: 10 KTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVCPQP------ 63
Query: 84 HYVVVDANIIIQSIDLLENPNCFFDVIVPQIVLDEVRNKSYPIYTRIRALCRDSEDDVKR 143
HY++ D N+++ ID+LE+P +VIV Q VL EVRN+S P+Y RIR + + E K
Sbjct: 64 HYLLPDTNVLLHQIDVLEDP-AIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQE---KH 119
Query: 144 FVVFHNEFSEYTFIDRTGNESINDRNDRAIRKTVEWYTNHLKGKG----INIVFVTNDRL 199
F F NE T++++ E+ NDRNDRAIR +WY HLK + ++F+TNDR
Sbjct: 120 FYTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRR 179
Query: 200 NRQAALKDSLVAKSLAEYVDMLPNSEEIKDLIPNLAPISGMSSKMLEDDPEGHGAAKAEF 259
N++ A+++ + A + EYV L + E LI LA +S EG+ +
Sbjct: 180 NKEKAIEEGIPAFTCEEYVKSLTANPE---LIDRLACLS----------EEGNEIESGKI 226
Query: 260 SFPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSL---PTFKKPVLVLGQKNLNRA 316
F E+ S++ G+K+G+ QG+ + S N+LE TV + K +++ G K+LNRA
Sbjct: 227 IFSEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWIHGDSEENKEIILQGLKHLNRA 286
Query: 317 FNGDLVVVELLPQSEWKAPSTVTMDSEHFNVXXXXXXXXXXXXXXXSGVLDDSGAIMSDK 376
+ D+V VELLP+S+W APS+V VL D G D
Sbjct: 287 VHEDIVAVELLPKSQWVAPSSV--------------------------VLHDEGQNEEDV 320
Query: 377 DRRLLAQSAILAQKSNKV-QPTARVVGITRRSWRQYVGQITPTSVDPQSSGTQNVFVILM 435
++ + + S K+ +PT RVVGI +R+WR Y G ++ + + +++F
Sbjct: 321 EKEEETERMLKTAVSEKMLKPTGRVVGIIKRNWRPYCGMLSKSDI---KESRRHLFTPA- 376
Query: 436 DKCLPKIRIRTRLAKQLLNKRIVISVDCWPENYRYPLGHFVRDLGDIESAQAETEALLLE 495
DK +P+IRI TR A L +RI++++D WP N RYP GHFVR+LGD+ + ETE LLLE
Sbjct: 377 DKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETETEVLLLE 436
Query: 496 HDVEYRPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRNDPLLPSRKDFRDKLICSIDPPGC 555
HDV ++PFS+ VL LPK P +T+ + + +R+D R ICS+DPPGC
Sbjct: 437 HDVPHQPFSQAVLSFLPK------MPWSITEKD-------MKNREDLRHLCICSVDPPGC 483
Query: 556 VDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLVDKRIDMLPML 615
DIDDALH ++L NGN EVGVHIADV+HF++PG ALD E A RGT+VYL +KRIDM+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 616 LGTDLCSLKPYVDRFAFSVVWELDNDANIVGVDFTKSVIRSREAFSYEKAQNRIDDETAK 675
L ++LCSLK VDR AFS +WE++++A I+ FTKSVI S+ + +Y +AQ RID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRIDSANMN 603
Query: 676 DELTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLDTNSLV 735
D++T +R R++ GAL L+SPEV+ HMDSET DP +++ K+L +TNS+V
Sbjct: 604 DDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMV 663
Query: 736 EEFMLLANISVARKIYEAFPQTAMLRRHAAPPSTNFELLNEMLQVRKGMSISLESSKALA 795
EEFMLLANISVA+KI+E F + A+LR+H APP +N+E+L + + R + I +++K+LA
Sbjct: 664 EEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVKAARSR-NLEIKTDTAKSLA 722
Query: 796 DSLDRCEDPNDSYLNTLIRIMSTRCMMAAQYFHAGAFSYADFRHYGLAVDIYTHFTSPIR 855
+SLD+ E P YLNTL+RI++TRCMM A YF +G + DF HYGLA IYTHFTSPIR
Sbjct: 723 ESLDQAESPTFPYLNTLLRILATRCMMQAVYFCSGMDN--DFHHYGLASPIYTHFTSPIR 780
Query: 856 RYCDVVAHRQLAGAIGYEALDLSHRDKQKMEMICRNINKKHRNAQFAGRASIEYYVGQVM 915
RY DV+ HR LA AIG + DK K+ IC+N+N +H+ AQ+A RAS+ ++
Sbjct: 781 RYADVIVHRLLAVAIGADCTYPELTDKHKLADICKNLNFRHKMAQYAQRASVAFHTQLFF 840
Query: 916 RNNE-STETGYVIKVFNNGIAVLVPKFGVEGLIRLENLTENPQSAEFIEDQF-SLRFVDK 973
++ +E Y++ V N I VL+PK+G+EG + E + P +D+ SL+ D
Sbjct: 841 KSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEE-KDKPNPQLIYDDEIPSLKIED- 898
Query: 974 NGVSKEVSVFDKVEVQL 990
VFDKV+V++
Sbjct: 899 ----TVFHVFDKVKVKI 911
>7301148 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 982
Score = 717 bits (1851), Expect = 0.0
Identities = 402/983 (40%), Positives = 578/983 (57%), Gaps = 81/983 (8%)
Query: 25 RSRNGSAQKVVREHYLRKDIPCLSRICDIC-PNIIVPNAAGELPKFVLSETPQELQGLGK 83
+++ G+ K+VREHYLR DI C S +C C N + + K L + P
Sbjct: 10 KTKRGNILKIVREHYLRDDIGCGSELCRECFQNEVYQLTSQHANKSTLFKFP-------- 61
Query: 84 HYVVVDANIIIQSIDLLENPNCFFDVIVPQIVLDEVRNKSYPIYTRIRALCRDSEDDVKR 143
HY+V+D N+++ ID+LE + +V+V VL+EV+++S IY R + D +
Sbjct: 62 HYLVLDTNVVLDQIDVLEE-DVLRNVVVLTTVLNEVKHRSSAIYKRFNEIVHDR---TRN 117
Query: 144 FVVFHNEFSEYTFIDRTGNESINDRNDRAIRKTVEWYTNHLKGK------------GINI 191
F VF NE + T+ DR +E+ NDRNDRAIR +WY +HL+ +
Sbjct: 118 FYVFVNEHHKETYADREPDETANDRNDRAIRLATKWYDDHLQASQSSKEFERSGKAATRV 177
Query: 192 VFVTNDRLNRQAALKDSLVAKSLAEYVDMLPNSEEIKDLIPNLAPISGMSSKMLEDDPEG 251
V +T+D NR A + ++ + AEYV L + + D + S K + + G
Sbjct: 178 VLLTDDAANRAKAEAEGILVTTAAEYVKSLEDFPLLMDKL---------SHKTFDSEKNG 228
Query: 252 HGAAKAEFSFPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSLPTFKKPVLVLGQK 311
+P + S ++ GL+ L QG+ Q S N+LEGTV++ F+K +L+ G++
Sbjct: 229 LP------QYPPHLSMKELLEGLRQNKLLQGTFQASRENYLEGTVNVEKFEKGILIQGRE 282
Query: 312 NLNRAFNGDLVVVELLPQSEWKAPSTVTMDSEHFNVXXXXXXXXXXXXXXXSGVLDDSGA 371
+LNRA +GDLV VELLP++EW APS + ++ ++ D+ +
Sbjct: 283 SLNRAVDGDLVAVELLPEAEWSAPSEIVLEEKNVYA-------------------DEVPS 323
Query: 372 IMSDKDRRLLAQSAILAQKSNKVQPTARVVGITRRSWRQYVGQITPTSVDPQSSGTQNVF 431
KD + A S + PT R+VGI RR WRQY G + P+ ++ + +++F
Sbjct: 324 EERAKDENEMLNQVRAAALSAERTPTGRIVGIVRRKWRQYCGILQPSLIEDTN---RHIF 380
Query: 432 VILMDKCLPKIRIRTRLAKQLLNKRIVISVDCWPENYRYPLGHFVRDLGDIESAQAETEA 491
V D+ +P+IRI TR A L N+RI++++D WP N RYP GHFVR LG + E E
Sbjct: 381 VPA-DRKIPRIRIETRQAAMLQNQRIIVTIDTWPRNSRYPHGHFVRSLGPLGDMATENEV 439
Query: 492 LLLEHDVEYRPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRNDPLLPSRKDFRDKLICSID 551
+LLEHDV + FS +VL LPK P +TD + + R D RD ICS+D
Sbjct: 440 ILLEHDVPHCKFSDEVLSFLPK------MPWTITDEDYSK-------RVDLRDLYICSVD 486
Query: 552 PPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLVDKRIDM 611
PPGC DIDDALH K+LPNGN EVGVHIADV+HF++PG ALD E A+RGT+VYLV KRIDM
Sbjct: 487 PPGCTDIDDALHCKELPNGNLEVGVHIADVSHFIRPGNALDMEAAARGTTVYLVGKRIDM 546
Query: 612 LPMLLGTDLCSLKPYVDRFAFSVVWELDNDANIVGVDFTKSVIRSREAFSYEKAQNRIDD 671
+P LL ++LCSL V+RFAFS VWE+DN+AN++ F KSVI+S+ A +YE+AQN IDD
Sbjct: 547 VPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKSVIKSKRAMTYEEAQNIIDD 606
Query: 672 ETAKDELTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLDT 731
T ++E+ +R R+D GAL LASPE++ +DSET +P EVE+K++ +T
Sbjct: 607 ATQQNEIAKSLRNLNRLAKILKKRRMDNGALVLASPEIRFQVDSETHEPLEVEVKQMRET 666
Query: 732 NSLVEEFMLLANISVARKIYEAFPQTAMLRRHAAPPSTNFELLNEMLQVRKGMSISLESS 791
NS+VEEFMLLANI+VA I F + A+LRRH PP TNF+ L + + +G + + S
Sbjct: 667 NSMVEEFMLLANITVAEHIATEFSECAVLRRHPRPPPTNFDPLVKSARY-QGFQVDINSG 725
Query: 792 KALADSLDRCEDPNDSYLNTLIRIMSTRCMMAAQYFHAGAFSYADFRHYGLAVDIYTHFT 851
L+ SLD+C ++ Y NT+IRI++TRCMM A YF +G+ +F HYGLA IYTHFT
Sbjct: 726 LELSHSLDKCVKADNPYFNTMIRILTTRCMMQAVYFISGSLQKEEFFHYGLAAPIYTHFT 785
Query: 852 SPIRRYCDVVAHRQLAGAIGYEALDLSHRDKQKMEMICRNINKKHRNAQFAGRASIEYYV 911
SPIRRY D++ HR LA +IG ++ D++ E +C N+N +H+ AQ+AGRAS+
Sbjct: 786 SPIRRYSDIMVHRLLAASIGADSTYAQLLDRKSNEELCHNLNYRHKMAQYAGRASVALNT 845
Query: 912 GQVMRNNESTETGYVIKVFNNGIAVLVPKFGVEGLIRLENLTENPQSAEFIEDQFSLRFV 971
R E E GYV+ V N + VL+PK+G+EG + L++ + E ++ + F
Sbjct: 846 HLFFRGKEEDEEGYVLFVRKNALQVLIPKYGLEGTLYLKSDKDGKDGVERVKSEIVFTFN 905
Query: 972 DKNGVSKEVSV----FDKVEVQL 990
+++ + V FD V V+L
Sbjct: 906 EEDHTQRCGDVVFHSFDPVTVRL 928
>At2g17510 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit Rrp44/Dis3
Length = 955
Score = 676 bits (1743), Expect = 0.0
Identities = 395/1001 (39%), Positives = 569/1001 (56%), Gaps = 65/1001 (6%)
Query: 21 KVF-VRSRNGSAQKVVREHYLRKDIPCLSRICDICPNIIVPNAAGELPKFVLSETPQELQ 79
KVF ++R G QK VRE YLR DI C + C C + ++ ++
Sbjct: 5 KVFNKKTRGGRIQKQVREVYLRDDIYCGAFSCKSCDSSAARLSSSKI------------- 51
Query: 80 GLGKHYVVVDANIIIQSIDLLENPNCFFDVIVPQIVLDEVRNKSYPIYTRIRALCRDSED 139
+VVD N+++ IDLLEN V+V +VLDEV+N++ +Y RIR LC +
Sbjct: 52 ------IVVDTNVVLHQIDLLEN-KAIDTVVVLSVVLDEVKNRNRSVYNRIRLLC---SN 101
Query: 140 DVKRFVVFHNEFSEYTFIDRTGNESINDRNDRAIRKTVEWYTNHLKGKGINIVFVTNDRL 199
++F VF N + T++ ES ND NDRAIR WY HL G ++ VTNDR
Sbjct: 102 PARQFYVFSNHVHKDTYVQAMEKESANDHNDRAIRVATLWYQKHL-GDTSQVLLVTNDRE 160
Query: 200 NRQAALKDSLVAKSLAEYVDMLPNSEEIKDLIPNLAPISGMSSKMLEDDPEGHGAAKAEF 259
N++ A ++ + A+++ YV L E+ DL+ + + +D + +K +
Sbjct: 161 NKRKATEEGISAETIEAYVKSL-GQPELLDLLAQPT-----NEDITMEDADDSRPSKRKL 214
Query: 260 SFPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSLPTFKKPVLVLGQKNLNRAFNG 319
+ E+ S I GL G +QG ++++ +N E V + + +++ G+ N+NRAF+G
Sbjct: 215 IYQEHKPMSEITAGLHRGIYHQGKLRVNRFNPYEAYVGSESIGEEIIIYGRSNMNRAFDG 274
Query: 320 DLVVVELLPQSEWKAPSTVTMDSEHFNVXXXXXXXXXXXXXXXSGVLDDSGAIM------ 373
D+V VELLP+ +W+ +++ E S D+ +
Sbjct: 275 DIVAVELLPRDQWQDEKALSIAEEAVISLHDVVLNLSFFQISNSNADDEEDDTVHLAPDN 334
Query: 374 -SDKDRRL-LAQSAILAQKSNKVQPTARVVGITRRSWRQYVGQITPTSVDPQSSGTQNVF 431
D R L+ + + V+P+ RVVG+ RR+W Y G + P S+ S GT +
Sbjct: 335 VDDAPRTSNLSHETSGDKNAAPVRPSGRVVGVIRRNWHSYCGSLEPMSLPAGSGGTAHAL 394
Query: 432 VILMDKCLPKIRIRTRLAKQLLNKRIVISVDCWPENYRYPLGHFVRDLGDIESAQAETEA 491
+ D+ +PKIRI TR + LL+ RIV++VD W RYP GH+VR +G I + ETE
Sbjct: 395 FVSKDRRIPKIRINTRQLQNLLDMRIVVAVDSWDRQSRYPSGHYVRPIGKIGDKETETEV 454
Query: 492 LLLEHDVEYRPFSKKVLDCLPKEGHDWK-APEDLTDPEAIRNDPLLPSRKDFRDKLICSI 550
+L+E+DV+Y PFS +VL CLP W + ED+++P R+D R L+ S+
Sbjct: 455 VLIENDVDYSPFSSQVLACLPPL--PWSVSSEDVSNPV----------RQDLRHLLVFSV 502
Query: 551 DPPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLVDKRID 610
DPPGC DIDDALH LPNGN+E+GVHIADVT+FV PGT LD E + RGTSVYLV++RID
Sbjct: 503 DPPGCKDIDDALHCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERRID 562
Query: 611 MLPMLLGTDLCSLKPYVDRFAFSVVWELDNDANIVGVDFTKSVIRSREAFSYEKAQNRID 670
MLP L D+CSL+ V+R AFSV+WE+ DA I+ FTKS+I+S A SY +AQ R+D
Sbjct: 563 MLPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYIEAQARMD 622
Query: 671 DETAKDELTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLD 730
D D LT +R R+D GAL LAS EVK +D E DP + + ++L+
Sbjct: 623 DSRLTDSLTTDLRNMNTLAKIMRQRRIDRGALTLASAEVKFDIDPENHDPLNIGMYQILE 682
Query: 731 TNSLVEEFMLLANISVARKIYEAFPQTAMLRRHAAPPSTNFELLNEMLQVRK--GMSISL 788
N +VEEFML AN+SVA +I + FP ++LRRH P+ E+L +L+ G+++ +
Sbjct: 683 ANQMVEEFMLAANVSVAGQILKLFPSCSLLRRH---PTPTREMLEPLLRTAAAIGLTLDV 739
Query: 789 ESSKALADSLDRC--EDPNDSYLNTLIRIMSTRCMMAAQYFHAGAFSYADFRHYGLAVDI 846
SSKALADSLDR EDP Y N LIRI++TRCM A YF +G S ++ HYGLA +
Sbjct: 740 SSSKALADSLDRAVGEDP---YFNKLIRILATRCMTQAVYFCSGDLSPPEYHHYGLAAPL 796
Query: 847 YTHFTSPIRRYCDVVAHRQLAGAIGYEALDLSHRDKQKMEMICRNINKKHRNAQFAGRAS 906
YTHFTSPIRRY DV HR LA ++G L +D+ ++ + N+N +HRNAQ AGRAS
Sbjct: 797 YTHFTSPIRRYADVFVHRLLAASLGIYKLPTVFQDRPQLTSVADNLNYRHRNAQMAGRAS 856
Query: 907 IEYYVGQVMRNNESTETGYVIKVFNNGIAVLVPKFGVEGLIRLENLTENPQSAEFIEDQF 966
+E YV R + E V+K+ +NG V VPK+G+EG + L E + ++ D+
Sbjct: 857 VELYVLIYFRTRPTDEEARVVKIRSNGFIVFVPKYGIEGPVYLTGKGEK-GAGDWYVDEE 915
Query: 967 SLRFVDKNGVSKEVSVFDKVEVQLKSVLDPATSKRKAQLLL 1007
+ V +G S SV V++ ++ V++P ++ K QL L
Sbjct: 916 KQKIVKMDG-SLSYSVLQTVKIHME-VVEPQPNRPKLQLTL 954
>CE05214 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 1029
Score = 550 bits (1418), Expect = e-156
Identities = 356/1001 (35%), Positives = 523/1001 (51%), Gaps = 135/1001 (13%)
Query: 23 FVRSRNGSAQKVVREHYLRKDIPCLSRICDICPNIIVPNAAGELPKFVLSETPQELQGLG 82
+ ++R+G K E YLR D+ C C C + G P + E P +G
Sbjct: 19 YFQNRSGKVYKRAEERYLRNDLSCGLAQCGTCKDF------GTNPLLKI-ENPVRNAKVG 71
Query: 83 KHYVVVDANIIIQSIDLLENPNCFFDVIVPQIVLDEVRNKSYPIYTRIRALCRDSEDDVK 142
+H ++VD+ +I+ DL ++ + D+IV Q V + V+ K+ P Y ++ +LC + D
Sbjct: 72 RHALIVDSTSLIRFYDLFDS-SLLRDLIVTQTVWEGVKAKAVPAYKKMNSLCYEDAKD-- 128
Query: 143 RFVVFHNEFSEYTFIDRTGNESINDRNDRAIRKTVEWYTNHLKGKGINIVFVTNDRLNRQ 202
RF VF NEF TF + + E ++ R + + T + H + + V + D +++
Sbjct: 129 RFHVFMNEFHCETFSESSKFEDLS-RGEELLLSTALYLKTHWQKHNVAPVVLVFDEDSKK 187
Query: 203 AALKDSLVAKSLAEYVDML--PNSEEIKDLIPNLAPISGMSSKMLEDDPEGHGAAKAEFS 260
L EY+ L P + + D +M + G+G K F
Sbjct: 188 RMENHYQHVMYLKEYIQNLEDPGKQALLD-------------QMAAYESSGNGNEKQIFD 234
Query: 261 FPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSLPTFKKPVLVLGQKNLNRAFNGD 320
EY S RIM G+ +G++ +G+ +S N+ E TV + + G N NRA NGD
Sbjct: 235 --EYLSHDRIMEGIASGTIKRGNFSVSRENYREATVIIDDQLTSWFITGN-NCNRAVNGD 291
Query: 321 LVVVELLPQSEWKAPSTVTM--DSEHFNVXXXXXXXXXXXXXXXSGVLDDSGAIMSDKDR 378
V V+LLP+ +W AP D E + G D+ +D+ +
Sbjct: 292 TVAVQLLPEDQWTAPEKKIRLRDVEEY-----------VKTADDMGNEDEENDDENDEPK 340
Query: 379 RLLAQSAILAQKSNKVQ-PTARVVGITRRSWRQYVGQITPTSVDPQSSGTQNVFVILMDK 437
A+KS K+ TA+VVGI +R+WR+Y G + P++V G + ++
Sbjct: 341 ---------AKKSKKMTVSTAKVVGIIKRNWREYCGMLLPSTV----KGARRHLFCPAER 387
Query: 438 CLPKIRIRTRLAKQLLNKRIVISVDCWPENYRYPLGHFVRDLGDIESAQAETEALLLEHD 497
+P+IRI T A+ L +RIV+++D WP + +YPLGH+VR +G++ S + E E LLLEHD
Sbjct: 388 LIPRIRIETEQAETLSQQRIVVAIDHWPRDSKYPLGHYVRSIGEMGSRETENEVLLLEHD 447
Query: 498 VEYRPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRNDPLLPSRKDFRDKLICSIDPPGCVD 557
+ + PFS+ VLDCLP+E +W +P+ N LP R D RD ICS+DP GC D
Sbjct: 448 IPHAPFSESVLDCLPRE--EW-------EPDLTENRGPLP-RVDLRDLTICSVDPLGCTD 497
Query: 558 IDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLVDKRIDMLPMLLG 617
IDDALH KQ+ +EVGVHIADVTHFV+PGTA+D E A RGT+VYL D+RIDMLP LL
Sbjct: 498 IDDALHCKQIGEDLFEVGVHIADVTHFVRPGTAIDDEAALRGTTVYLCDRRIDMLPCLLS 557
Query: 618 TDLCSLKPYVDRFAFSVVWELDNDANIVGVDFTKSVIRSREAFSYEKAQNRIDDETAKDE 677
++LCSL+ +R+AFS +W + + A+I V + KS+I+S+ A +YEKAQ IDD +++
Sbjct: 558 SNLCSLRGEEERYAFSCIWTMTSSADIQSVKYHKSLIKSKAALTYEKAQEIIDDPKEQND 617
Query: 678 LTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLDTNSLVEE 737
+ LG+R R GAL LAS EV+ MD E+ P +V K+ LDT+S+VEE
Sbjct: 618 VALGLRGLMKLSKVLNARRTGNGALTLASSEVRFDMDWESRTPKKVMEKQHLDTHSMVEE 677
Query: 738 FMLLANISVARKIYEAFPQTAMLRRHAAPPSTNFELLNEMLQVRKGMSISLESSKALADS 797
FMLLANISVA KI E +P A+LRRH P +++ L E + +G I +ES K LADS
Sbjct: 678 FMLLANISVAEKILEEYPDCALLRRHPVPLKESYKPLVEAAR-HRGFEIIVESGKGLADS 736
Query: 798 LDRCEDPNDSYLNTLIRIMSTRCMMAAQYFHAGAFSYADFR------------------- 838
L+RC D + LN L+R+++TRCM A YF AG ++D +
Sbjct: 737 LNRCVDKKNPMLNRLLRMLTTRCMTQAVYFSAGKDGFSDIKLEEKKFFVLKTLNLPYRSC 796
Query: 839 ---------HYGLAVDIYTHF--------------------TSPIRRY------CDVVAH 863
H ++ Y F T P+ +Y C + H
Sbjct: 797 LCDDTETSIHLSRGLNDYFLFKKEKLHMSVGVLFKLFDCLGTVPVPQYQHFGLACAIYTH 856
Query: 864 --------------RQLAGAIGYEALDLSHRDKQKMEMICRNINKKHRNAQFAGRASIEY 909
R LA AIG + + ++ + IC NIN +H+ AQ+AGRAS++
Sbjct: 857 FTSPIRRYADVIVHRLLAAAIGADDIQSGLLNQARCTKICTNINYRHKQAQYAGRASVQL 916
Query: 910 YVGQVMRNNESTETGYVIKVFNNGIAVLVPKFGVEGLIRLE 950
V + + T G+V+ V NNGI V VPK+G+E +I L+
Sbjct: 917 NVVRYFKGKVETCEGFVMGVRNNGIQVFVPKYGLESIIVLQ 957
>Hs19115966 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 971
Score = 416 bits (1069), Expect = e-116
Identities = 296/921 (32%), Positives = 461/921 (49%), Gaps = 122/921 (13%)
Query: 127 YTRIRALCRDSEDDVKRFVVFHNEFSEYTFIDRTGNESINDRNDRAIRKTVEWYTNHLKG 186
Y ++R L +D+ D ++F NEF + ++ R ES+ R+I WY +H +
Sbjct: 17 YNKLRNLLKDARHDC---ILFANEFQQCCYLPRERGESMEKWQTRSIYNAAVWYYHHCQD 73
Query: 187 KGINIVFVTNDR--LNRQAALKDSLVAKSLAEYVDML-PNSEEIKDLIPNLAPISGMSSK 243
+ + IV VT D + + + + + + Y+D P+ + +L ++ S +
Sbjct: 74 R-MPIVMVTEDEEAIQQYGSETEGVFVITFKNYLDNFWPDLKAAHELCDSIL----QSRR 128
Query: 244 MLEDDP-EGHGAAKAEFSFPEYYSTSRIMGGLKNGSLYQGSIQISEYNF-------LEGT 295
E++ E HG +PE+ + G+K+G QG + ++++ L+G
Sbjct: 129 ERENESQESHGK-----EYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGA 183
Query: 296 VSLPT-FKKPVLVLGQKNLNRAFNGDLVVVELLPQSEWKAPSTVTMDSEHFNVXXXXXXX 354
S + +L+ G K NR+ +GD+VVVELLP++EWK + +++
Sbjct: 184 SSKDSDLVSDILIHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCEND----------- 232
Query: 355 XXXXXXXXSGVLDDSGAIMSDKDRRLLAQSAILAQKSNKVQPTARVVGITRRSWRQYVGQ 414
DD + + ++ PT RVVGI +++WR YV
Sbjct: 233 -----------CDDKAS----------------GESPSEPMPTGRVVGILQKNWRDYVVT 265
Query: 415 ITPTSVDPQSSG--TQNVFVILMDKCLPKIRIRTRLAKQLLNKRIVISVDCWPENYRYPL 472
P+ + QS G Q + V D +PKIRI T+ A+ L + R+V+ +D W YP
Sbjct: 266 F-PSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAETLQDFRVVVRIDSWESTSVYPN 324
Query: 473 GHFVRDLGDIESAQAETEALLLEHDVEYRPFSKKVLDCLPKEGHD--WKAPEDLTDPEAI 530
GHFVR LG I + E +L+E+ + PFS+ + +P + WK PE
Sbjct: 325 GHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKV-----SPEEE 379
Query: 531 RNDPLLPSRKDFRDK-LICSIDPPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGT 589
+ RKD R L+ SIDP GC D+DD L + L NGN E+GVHIADVTHFV P +
Sbjct: 380 QK------RKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNS 433
Query: 590 ALDAEGASRGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVVWELDNDA-NIVGVD 648
+D E +R T+ YL D+R DMLP +L DLCSL VDR+A S++WELD + I V
Sbjct: 434 YIDIEARTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVW 493
Query: 649 FTKSVIRSREAFSYEKAQNRID---------------DETAK----DELTLGMRAXXXXX 689
+ +++IRS YE AQ +D DE ++ +EL +
Sbjct: 494 YGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIA 553
Query: 690 XXXXXXRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLDTNSLVEEFMLLANISVARK 749
R GAL L EV V +D + + +++ K+ L+ + V E M+LAN VA+K
Sbjct: 554 RHVRAKRDGCGALELEGVEVCVQLD-DKKNIHDLIPKQPLEVHETVAECMILANHWVAKK 612
Query: 750 IYEAFPQTAMLRRHAAPPSTNFELLNEMLQVRKGMSISLESSKALADSLDRCEDPNDSYL 809
I+E+FP A+LR+H P F L E + KG I S+K LADSLD DP+D +
Sbjct: 613 IWESFPHQALLRQHPPPHQEFFSELRECAKA-KGFFIDTRSNKTLADSLDNANDPHDPIV 671
Query: 810 NTLIRIMSTRCMMAAQYFHAGAFSYADFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGA 869
N L+R M+T+ M A YF G+ + +F HYGLA+D YTHFTSPIRRY D+V HR L A
Sbjct: 672 NRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAA 731
Query: 870 IGYE-ALDLSHR--DKQKMEMICRNINKKHRNAQFAGRASIEYYVGQVMRNNE-STE--- 922
I + +++ + +E +CR+IN +++ AQ + + S E + ++ + +TE
Sbjct: 732 ISKDKKMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQSTELFQCMYFKDKDPATEERC 791
Query: 923 --TGYVIKVFNNGIAVLVPKFGVEGLIRLEN-----LTENPQSAEFIEDQFSLRFVDK-- 973
G + + NG+ + +P+FG++G L+N ++ P S + RF +K
Sbjct: 792 ISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKPGSLQRFQNKIT 851
Query: 974 ----NGVSKEVSVFDKVEVQL 990
+G S +FD V V++
Sbjct: 852 STTTDGESVTFHLFDHVTVRI 872
>ECU03g0700 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 835
Score = 384 bits (985), Expect = e-106
Identities = 301/963 (31%), Positives = 450/963 (46%), Gaps = 187/963 (19%)
Query: 15 GLTVTQKVFVRSRNGSAQKVVREHYLRKDIPCLSRICDICPNIIVPNAAGELPKFVLSET 74
G+ +K+ SR K VRE Y+R D+ C C
Sbjct: 4 GVVTERKI---SRRLRLIKRVREEYVRDDVSCGFECCG---------------------G 39
Query: 75 PQELQGLGKHYVVVDANIIIQSIDLLENPNCFFDVIVPQIVLDEVRNKSYPIYTRIRALC 134
P G + + DAN++ + LL++ + I+ Q VL E+ +R +
Sbjct: 40 PCRASGKASVFAIPDANVVSRYRALLKSD--YVAAIICQSVLSELSKNDE---RGLRDVA 94
Query: 135 RDSEDDVKRFVVFHNEFSEYTFIDRTGNESINDRNDRAIRKTVEWYTNHLKGKGINIVFV 194
R+ + + VF + F T + + + +E+Y HL I+ +
Sbjct: 95 RE-----RGYPVFCDSFCRST-------------HGKGLEGVLEFYRAHLPQHNFTILDI 136
Query: 195 TNDRLNRQAALKDSLVAKSLAEYVDMLPNSEEIKDLIPNLAPISGMSSKMLEDDPEGHGA 254
N + EY + S++I+DL+ N+ D+ E
Sbjct: 137 GN-----------------IGEYGRYV--SDDIRDLLENV------------DEKEAT-- 163
Query: 255 AKAEFSFPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSLPTFKKPVLVLGQKNLN 314
+ EY I+ G K LY+G++++S YN G V K VLV+G+KN+N
Sbjct: 164 -----EYEEYVENLDILYGRKG--LYRGTLEVSMYNCYSGFVVDGDVK--VLVVGKKNMN 214
Query: 315 RAFNGDLVVVELLPQSEWKAPSTVTMDSEHFNVXXXXXXXXXXXXXXXSGVLDDSGAIMS 374
RA +GD V VE++ + + + +D+E +
Sbjct: 215 RALSGDEVYVEVVDEYD---EDGILLDNEEG----------------------------T 243
Query: 375 DKDRRLLAQSAILAQKSNKVQPTARVVGITRRSWRQYVGQITPTSVDPQSSGTQNVFVIL 434
+ R+ A + +VVGI RR R +G I+P +V G QNV VI
Sbjct: 244 QETRKGAAGEGVFG----------KVVGIHRRKCRAVIGSISPRTV--HGDGAQNVLVIP 291
Query: 435 MDKCLPKIRIRTRLAKQLLNKRIVISVDCWPENYRYPLGHFVRDLGDIESAQAETEALLL 494
+D+ +P IRIRT A++L+NKR+ + +D W YP GH+ R LG + AE EA+L+
Sbjct: 292 IDRRIPAIRIRTSQAEELMNKRLCVEIDGWERTSNYPSGHYYRRLGTLGDRNAEMEAVLV 351
Query: 495 EHDVEYRPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRNDPLLPSRKDFRDKLICSIDPPG 554
+ + Y ++K + L + ED+ E N+ +R+DFR+ I SIDPP
Sbjct: 352 ANGITY--YNKNWAEILRVPWMN----EDIFGMEKAYNEVREGTREDFRELSIVSIDPPD 405
Query: 555 CVDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLVDKRIDMLPM 614
C DIDDALH + LPNGNWEVGVHIADVT++V G+ +D A RGT++YL + RIDMLP
Sbjct: 406 CEDIDDALHCRLLPNGNWEVGVHIADVTYYVTKGSEIDKIAADRGTTIYLPEWRIDMLPP 465
Query: 615 LLGTDLCSLKPYVDRFAFSVVWELDNDANIVGVDFTKSVIRSREAFSYEKAQNRIDD-ET 673
L TDLCSL DR AFSVVWE+ +D +V F +S+IRS+ +FSY +A + +
Sbjct: 466 ALSTDLCSLVAGKDRAAFSVVWEMSSDVRVVRTHFCRSLIRSKRSFSYNEAYDAVQGLVD 525
Query: 674 AKDELTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLDTNS 733
A DE++ +R R G+L+L++ ++ E+K+ TN
Sbjct: 526 AGDEVSRSLRMLLEISRVLRSRRFAKGSLDLSTRQLVFR-------EGGFEMKEYFPTNF 578
Query: 734 LVEEFMLLANISVARKIYEAFPQTAMLRRHAAPPSTNFELLNEMLQVRKGMSISLESSKA 793
LVEEFM+LANISVA IY P +++LR+H PP + ++ G+ I S +A
Sbjct: 579 LVEEFMVLANISVASFIYHHHPDSSLLRKH--PPPSVLDI---------GLDIDTSSPRA 627
Query: 794 LADSLDRCEDPNDSYLNTLIRIMSTRCMMAAQYFHAGAFSYADFRHYGLAVDIYTHFTSP 853
L++SL++ E L + M R M A Y +G HYGLA IYTHFTSP
Sbjct: 628 LSESLEKME----GVRKDLAKRMLIRSMNQAVYVVSG--ETPSLHHYGLATPIYTHFTSP 681
Query: 854 IRRYCDVVAHRQL----------------AGAIGYEALDLSHRDKQKM------EMICRN 891
IRRY D++ HR L G + + A D + M E +CRN
Sbjct: 682 IRRYADIIVHRILNHILQTAPTKEAQINKLGIVTFRA--RKRTDGESMDEVFVDEDMCRN 739
Query: 892 INKKHRNAQFAGRASIEYYVGQVMRNNESTETGYVIKVFNNGIAVLVPKFGVEGLIRLEN 951
+N +HR A+ A + V +RN E G+V + NGI V VP++ +E ++ E
Sbjct: 740 MNSRHRAARKAAWECDKLTVYMALRNEEPVVRGFVTNIKPNGIVVYVPEYSLEEVVVSEG 799
Query: 952 LTE 954
E
Sbjct: 800 CFE 802
>SPAC2C4.07c [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 927
Score = 303 bits (775), Expect = 1e-81
Identities = 231/771 (29%), Positives = 367/771 (46%), Gaps = 75/771 (9%)
Query: 261 FPEYYSTSRIMGGLKNGSLYQGSIQISE--YNFLEGTVSLPTFKKPVLVLGQKNLNRAFN 318
+P YY ++ + GLK+G+L++G+++I E + +P F V G NRAF+
Sbjct: 176 YPLYYDSATVKKGLKSGTLFKGTLRILENHRSAFACMEDIPDF----YVDGPIARNRAFH 231
Query: 319 GDLVVVELLPQSEWKAPSTVTMDSEHFNVXXXXXXXXXXXXXXXSGVLDDSGAIMSDKDR 378
D+V+VE + ++ + + + V L+ D
Sbjct: 232 NDVVIVEPVMNNDSPTEKSNFLQNGVEKVKIKDHDDELGGAMEHLERLEIKSVASFKGDS 291
Query: 379 RLLAQSAILAQKSNKVQPTARVVGITRR-SWRQYVGQITPTSVDPQSSGTQNVFVILMDK 437
R A+ + +++ +++VGI R W + +V+ S + I DK
Sbjct: 292 RTRARVVAIEKRAE----ISKIVGILRAPGW-------SLKNVEYVSKKSSYAIFIPKDK 340
Query: 438 CLPKIRIRTRLAKQLLNKRIV------------ISVDCWPENYRYPLGHFVRDLGDIESA 485
LP I I L + + + + W RYP+G LG+I
Sbjct: 341 RLPFITIHKNDLSDLSGENWIENILKHHDQLFSVEITRWSIYSRYPMGVLGEKLGNITDV 400
Query: 486 QAETEALLLEHDVEYRPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRNDPLLPSRKDFRDK 545
+A T ALLLE+ + PFS +VL+CLP + DW I + + R+D R++
Sbjct: 401 EAYTNALLLENGISSSPFSDEVLNCLPPD--DW-----------IISHEEIKKRRDLRNE 447
Query: 546 LICSIDPPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLV 605
LI +IDP D+DDA+ + L NG +EVGVHIADVTHFVKP +ALD E ASR T+VYLV
Sbjct: 448 LIITIDPETARDLDDAVSCRALDNGTYEVGVHIADVTHFVKPDSALDKEAASRATTVYLV 507
Query: 606 DKRIDMLPMLLGTDLCSLKPYVDRFAFSVVWELDNDANIVGVD-FTKSVIRSREAFSYEK 664
K I MLP LL LCSL P V+R AFSV W+LD++ +G F K+VI++ +Y +
Sbjct: 508 QKAIPMLPPLLCERLCSLNPNVERLAFSVFWKLDSNGKEIGKRWFGKTVIKTCARLAYSE 567
Query: 665 AQNRIDDETAKD-------------ELTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKV 711
AQ I+ ++ D ++ + R GA+ + S E+K
Sbjct: 568 AQGVIEGKSWDDAVGKPIGGTHTPKDVETSILTLCEISRKLRKDRFAKGAVEINSTELKF 627
Query: 712 HMDSETSDPNEVEIKKLLDTNSLVEEFMLLANISVARKIYEAFPQTAMLRRHAAPPSTNF 771
+D E PN+ E+ + D N L+EEFMLLAN SVA I + F ++LRRHA+P
Sbjct: 628 QLD-EYGMPNKCEVYEQTDANHLIEEFMLLANRSVAEHISKNFSNNSLLRRHASPKE--- 683
Query: 772 ELLNEMLQVRKGMSISLE--SSKALADSLDRCEDPNDSYLNTLIRIMSTRCMMAAQYFHA 829
+ +NE K M+ + SS A S+ R + L L M+ R + A+YF
Sbjct: 684 KQINEFCHFLKSMNFDFDASSSAAFNASMVRLRSTFNEELVELFENMAVRSLNRAEYFCT 743
Query: 830 GAF-SYADFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEALDLSHRDKQKMEMI 888
G F D+ HY L+ + YTHFTSPIRRY D++ HR L ++ + + DK+ ++
Sbjct: 744 GDFGEKTDWHHYALSFNHYTHFTSPIRRYPDIIVHRLLERSLKNTSPGI---DKKNCSLV 800
Query: 889 CRNINKKHRNAQFAGRAS----IEYYVGQVMRNNESTE---TGYVIKVFNNGIAVLVPKF 941
+ N+K + S + Y+ + + ++ + ++ N I V + ++
Sbjct: 801 AAHCNEKKEKSTTVQEDSQQLFLSVYIAEYCKKHDKKSMPVQAFATRISGNSIDVYISEY 860
Query: 942 GVEGLIRLENLTENPQSAEFIEDQFSLRFVDKNGVSKEVSVFDKVEVQLKS 992
G+ + L + + +S D S++ + K +++ D+ +V L S
Sbjct: 861 GISNRVDLSS-DDRIKSFIVAPDDSSVKITLFDDSQKTIALTDRFQVYLYS 910
>CE02758 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 817
Score = 293 bits (750), Expect = 9e-79
Identities = 229/727 (31%), Positives = 348/727 (47%), Gaps = 78/727 (10%)
Query: 261 FPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSLP--TFKKPVLVLGQKNLNRAFN 318
F EY S G+++GS+++G ++I+ N+ E + P T VLVLGQ NRA
Sbjct: 34 FTEYISKEETDAGIEDGSMFKGVLRINPKNYQECFLDHPKGTNHPDVLVLGQDR-NRAMQ 92
Query: 319 GDLVVVELLPQSEWKAPST--VTMDSEHFNVXXXXXXXXXXXXXXXSGVLDDSGAIMSDK 376
GD+V V++ P+ +W V +EH SG D++ ++K
Sbjct: 93 GDVVAVKIKPKEDWLVNYVEYVKWWAEH------------KKGDRNSGKTDNNSPNKTEK 140
Query: 377 D--RRLLAQSAILAQK---SNKVQPTARVVGITRRSWRQYVG--QITPTSVDPQSSGTQN 429
R + + + + + S + A V + ++ +R G Q+ P S +P N
Sbjct: 141 RCLRNEIQDNGVTSDEVPDSCLITIGAIVHILEKKHFRVAAGKLQLMPNSANP------N 194
Query: 430 VFVILMDKCLPKIRI-RTRLAKQLLNKR-------IVISVDCWPENYRYPLGHFVRDLGD 481
V + D +P+I I ++ + K+ ++ + W Y G V+ LG
Sbjct: 195 VLFVATDSRVPRILIPKSDVDKEFFSRPKDFERFLYTAKITDWRAESVYADGRLVKLLGM 254
Query: 482 IESAQAETEALLLEHDVEYRPFSKKVLDCLP-KEGHDWKAPEDLTDPEAIRNDPLLPSRK 540
ETE ++ EH +++R FS + L+ LP +WK P D R+
Sbjct: 255 SGEIDTETERIVYEHQIDHREFSDECLESLPITTAENWKVP-----------DAEFEYRR 303
Query: 541 DFRDKLICSIDPPGCVDIDDALHAKQLPNGNW------EVGVHIADVTHFVKPGTALDAE 594
DFR ++ +IDP D+DDALHAK + + + E+GVHIADVT F+K GT LD
Sbjct: 304 DFRSDIVFTIDPKTARDLDDALHAKHIDDCDGKGTPGLEIGVHIADVTFFLKEGTELDKW 363
Query: 595 GASRGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVVWELDNDANIVGVDFTKSVI 654
+ RG S YL I MLP +L LCSL P VDR +FS V+++ +A + V F +SVI
Sbjct: 364 ASERGNSTYLSQTVIPMLPRILCEQLCSLNPGVDRLSFSTVFKMSYEAELYDVWFGRSVI 423
Query: 655 RSREAFSYEKAQNRID---------------DETAKDELTLGMRAXXXXXXXXXXXRLDA 699
RSR +YE AQ+ I+ D E+ R D+
Sbjct: 424 RSRVKLAYEHAQDFIENPEKDFTCDELPDISDGNTPFEIKEKTLMLHRIAQVLRQKREDS 483
Query: 700 GALNLASPEVKVHMDSETSDPNEVEIKKLLDTNSLVEEFMLLANISVARKIYEAFPQTAM 759
GAL + P +K +D E P V I ++ D+N LVEEFMLLAN+ VA+KI E FP+ A+
Sbjct: 484 GALRIELPRLKFALD-EDKKPQGVSIYEIKDSNKLVEEFMLLANMEVAKKIAENFPEHAL 542
Query: 760 LRRHAAPPSTNFELLNEMLQVRKGMSISLESSKALADSLDRCEDPN--DSYLNTLIRIMS 817
LR H P + + E R G + +S L+ SL + + + D + +I ++
Sbjct: 543 LRNHPPPKEKMIKDVAEQC-ARIGFPLDGRTSGLLSTSLRKYQGKSRLDMCIRQVISSLT 601
Query: 818 TRCMMAAQYFHAGAFSYADFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEALDL 877
+ M A+YF + + H+ L VD YTHFTSPIRRY DV+ HRQLA A+GY +
Sbjct: 602 IKPMQQAKYFCTFEMPLSFYHHFALNVDHYTHFTSPIRRYPDVIVHRQLAAALGYN--ER 659
Query: 878 SHRDKQKMEMICRNINKKHRNAQFAGRASIEYYVGQVMRNNESTE-TGYVIKVFNNGIAV 936
S R ++++ IC N ++ A S Y G + + V+ V + V
Sbjct: 660 SERVPEEIQEICTRCNDTKLASKEASDESAMLYFGVFIHQTGPMKCQAVVLGVMDLSFDV 719
Query: 937 LVPKFGV 943
L+ ++GV
Sbjct: 720 LIVEYGV 726
>Hs22045556 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 885
Score = 283 bits (724), Expect = 1e-75
Identities = 195/571 (34%), Positives = 288/571 (50%), Gaps = 46/571 (8%)
Query: 450 KQLLNKRIVISVDCWPENYRYPLGHFVRDLGDIESAQAETEALLLEHDVEYRPFSKKVLD 509
K N + + W E+ + LG + LG + ETE +L E+ V++ FS +VL+
Sbjct: 294 KDYANTLFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLE 353
Query: 510 CLPKEGHDWKAPEDLTDPEAIRNDPLLPSRKDFRDKLICSIDPPGCVDIDDALHAKQLPN 569
CLP +G W P PE R+D R I +IDP D+DDAL K L +
Sbjct: 354 CLP-QGLPWTIP-----PEEFSK------RRDLRKDCIFTIDPSTARDLDDALSCKPLAD 401
Query: 570 GNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDR 629
GN++VGVHIADV++FV G+ LD A R TSVYLV K + MLP LL +LCSL P D+
Sbjct: 402 GNFKVGVHIADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDK 461
Query: 630 FAFSVVWELDNDANIVGVDFTKSVIRSREAFSYEKAQNRIDDETAK-------------- 675
FSV+W L + I+ F +++IRS SYE AQ+ I+ T K
Sbjct: 462 LTFSVIWTLTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPAKELPPISPEHS 521
Query: 676 -DELTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLDTNSL 734
+E+ + R GAL L ++ +D ET P I + ++N L
Sbjct: 522 SEEVHQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKL 581
Query: 735 VEEFMLLANISVARKIYEAFPQTAMLRRHAAPPSTNFELLNEMLQV--RKGMSISLESSK 792
VEEFMLLAN++VA KI+ AFP+ A+LRRH PP T +L+++++ + G+ + S+
Sbjct: 582 VEEFMLLANMAVAHKIHRAFPEQALLRRH-PPPQT--RMLSDLVEFCDQMGLPVDFSSAG 638
Query: 793 ALADSLDRC--EDPNDSYLNTLIRIMSTRCMMAAQYFHAGAF-SYADFRHYGLAVDIYTH 849
AL SL + +D ++ M +R M A YF +G A FRHY L V +YTH
Sbjct: 639 ALNKSLTQTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTH 698
Query: 850 FTSPIRRYCDVVAHRQLAGAIGY-EALDLSHRDKQKMEMICRNINKKHRNAQFAGRASIE 908
FTSPIRR+ DV+ HR LA A+GY E LD++ QK C + + Q S
Sbjct: 699 FTSPIRRFADVLVHRLLAAALGYRERLDMAPDTLQKQADHCNDRRMASKRVQ---ELSTS 755
Query: 909 YYVGQVMRNNESTET-GYVIKVFNNGIAVLVPKFGVEGLIRLENLTENPQSAEFIEDQFS 967
+ +++ + E+ V+ + VLV ++GV+ I L + + +
Sbjct: 756 LFFAVLVKESGPLESEAMVMGILKQAFDVLVLRYGVQKRIYCNALALRSHHFQKVGKKPE 815
Query: 968 LRFV------DKNGVSKEVSVFDKVEVQLKS 992
L V ++ + +++F VEV L++
Sbjct: 816 LTLVWEPEDMEQEPAQQVITIFSLVEVVLQA 846
Score = 61.6 bits (148), Expect = 6e-09
Identities = 33/88 (37%), Positives = 46/88 (51%)
Query: 256 KAEFSFPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSLPTFKKPVLVLGQKNLNR 315
K + F Y S + GLK G+L QG ++I+ F E + P + + + G NR
Sbjct: 45 KKKSIFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNR 104
Query: 316 AFNGDLVVVELLPQSEWKAPSTVTMDSE 343
A NGDLVVV+LLP+ WK + D E
Sbjct: 105 ALNGDLVVVKLLPEEHWKVVKPESNDKE 132
>At1g77680 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 1055
Score = 235 bits (600), Expect = 2e-61
Identities = 200/705 (28%), Positives = 304/705 (42%), Gaps = 100/705 (14%)
Query: 261 FPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSLPTFKKPVLVLGQKNLNRAFNGD 320
F ++S + L+ G ++ +++ +N E + +L+ G +RA GD
Sbjct: 148 FSSHWSLDAVTEALEKGEAFKALFRVNAHNRNEAYCKIDGVPTDILINGNVCQSRAVEGD 207
Query: 321 LVVVELLPQSEWKAPSTVTMDS---------------------------EHFNVXXXXXX 353
VV++L P S W +S E F
Sbjct: 208 TVVIKLDPLSLWPKMKGFVTESAAKPEGTNSPPEKDDKKARQKNGIDVVEGFEDGFSKNK 267
Query: 354 XXXXXXXXXSGVLDDS--------GAIMSDKDRRLLAQS--AILAQKSNKVQPTARVVGI 403
+GV S G+ K IL+ +K +PT +VV +
Sbjct: 268 SSVIGKGAKNGVTPSSPPSLDSCLGSFCEQKGNCSAVDKLCGILSSFPHK-RPTGQVVAV 326
Query: 404 TRRS--------------WRQYVGQITPTSVDPQS-SGTQNVFVILMDKCLPKI------ 442
+S W Y P S S + V ++ D PK+
Sbjct: 327 VEKSLVRDSIVGLLDVKGWIHYKESDPKRCKSPLSLSDDEYVQLMPADPRFPKLIVPFHV 386
Query: 443 ---RIRTRLAK---QLLNKRIVISVDCWPENYRYPLGHFVRDLGDIESAQAETEALLLEH 496
IR RL L + + + W E +P+ G + + A+L ++
Sbjct: 387 LPGSIRARLENLDPNLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQINAILYQN 446
Query: 497 DVEYRPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRNDPLLPSRKDFRDKLICSIDPPGCV 556
V FS L LP+ W+ PE+ RKD RD + +IDP
Sbjct: 447 SVCDSDFSPGSLTSLPRV--PWEVPEEEVQ-----------RRKDLRDLCVLTIDPSTAT 493
Query: 557 DIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLVDKRIDMLPMLL 616
D+DDAL + LP G + VGVHIADV++FV P TALD E R TSVYL+ ++I MLP LL
Sbjct: 494 DLDDALSVQSLPGGFFRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISMLPPLL 553
Query: 617 GTDLCSLKPYVDRFAFSVVWELDNDANIVGVDFTKSVIRSREAFSYEKAQNRIDDETAKD 676
++ SL P DR AFS++W+L+ + +++ +++IRS SY+ AQ+ ID ++
Sbjct: 554 SENVGSLSPGADRLAFSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDGKSDVA 613
Query: 677 E--------------LTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKVHMDSETSDPNE 722
E +T ++ R GAL L + + V + E P +
Sbjct: 614 ENGWPALHGSFKWCDVTRSVKQLSEISTTLRQKRFRNGALQLENSK-PVFLFDEHGVPYD 672
Query: 723 VEIKKLLDTNSLVEEFMLLANISVARKIYEAFPQTAMLRRHAAPPSTNFELLNEMLQVRK 782
+N LVEEFMLLAN++ A I +A+ +++LRRH P + + E +
Sbjct: 673 FVTCSRKGSNFLVEEFMLLANMTAAEVISQAYRASSLLRRHPEPNTRKLKEF-EGFCSKH 731
Query: 783 GMSISLESSKALADSLDRCED--PNDSYLNTLIRIMSTRCMMAAQYFHAGAF--SYADFR 838
GM + + SS L DSL++ +DS ++ + + M A YF G S A++
Sbjct: 732 GMDLDISSSGQLQDSLEKITGNLKDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWG 791
Query: 839 HYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEALDLSHRDKQ 883
HY LAV +YTHFTSP+RRY D+V HR LA A+ EA +L + KQ
Sbjct: 792 HYALAVPLYTHFTSPLRRYPDIVVHRALAAAL--EAEELYSKQKQ 834
>7291934 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 968
Score = 176 bits (446), Expect = 2e-43
Identities = 172/605 (28%), Positives = 271/605 (44%), Gaps = 82/605 (13%)
Query: 396 PTARVVGITRRS-WRQYVGQIT---PTSV---------DPQSSGTQNVFVILMDKCLPKI 442
P A V+ IT+R+ RQ VG I+ PT + P V+V D C I
Sbjct: 384 PKAFVIAITKRTELRQIVGTISFTNPTKLCDDQLFYKFRPYDLRVPMVYVP-KDACAAHI 442
Query: 443 RIRTRL-AKQLLNKRIVISVDCWPENYRYPLGHFVRDLGDIESAQAETEALLLEHDV-EY 500
+ ++ LL ++ DC + + ++ +G + + E +A+L + + +
Sbjct: 443 GNKQQIDVSGLLYLAHILETDC----NGHCIAELIQPVGRVGNLDDELKAILFHNGLRDI 498
Query: 501 RPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRNDPLLPSRKDFRDKLICSIDPPGCVDIDD 560
+PF ++ +D + P E +R RKD R I +IDP D+DD
Sbjct: 499 KPFEQRFIDI-------YSQPPPPISQEDLRQ------RKDLRKMCIFTIDPMTARDLDD 545
Query: 561 ALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLVDKRIDMLPMLLGTDL 620
A+ ++L + +E+GVHI+DV+HF+ LD R TS+YL ++ I MLP L
Sbjct: 546 AVSIEKLGDNEYEIGVHISDVSHFLIEDNELDNIVKERSTSIYLANEVIHMLPQSLCMR- 604
Query: 621 CSLKPYVDRFAFSVVWELDNDANIVGV--DFTKSVIRSREAFSYEKAQNRIDDETAK--- 675
CSL P D+FAFSV W ++ ++ +F ++VI S F+YE AQ ID+ +
Sbjct: 605 CSLLPGQDKFAFSVFWRMNGKGVMLQKKPEFCRTVINSCSQFAYEHAQKIIDNPNERFTE 664
Query: 676 ------------DELTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKVHMDSETSDPNEV 723
D++ + RLD GAL + + +++ +D T +P
Sbjct: 665 NDFPTILNGFNPDDIRNRVLWLHDIASSIRKTRLDNGALTINNAKLRFLLDPITGEPLSF 724
Query: 724 EIKKLLDTNSLVEEFMLLANISVARKIYEAFPQTAMLRRHAAPPSTNFELLNEMLQVRKG 783
E++K + N L+EEFMLLAN +VAR I+++FP A+LR H P + + L E L + G
Sbjct: 725 EVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNHPPPLIKSLKALREKL-LALG 783
Query: 784 MSISLESSKALADSLDRC--EDPNDSYLNTLIRIMSTRCMMAAQYFHAGAFSYADFRHYG 841
+ SSKAL +S+ R E PN +N + + + M A A A Y
Sbjct: 784 FELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMARATLL-AAALKYC------ 836
Query: 842 LAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEALDLSHRDKQKMEMICRNINKKH--RNA 899
T P R D+ +LA Y A +K N+ K N
Sbjct: 837 ---------TPPKRTPDDLHTLTKLANERKYNA--------KKAGEDSGNLYFKRYVHNK 879
Query: 900 QFAGRASIEYYVGQVMRNNESTETGYVIKVFNNGIAVLVPKFGVEG--LIRLENLTENPQ 957
Q ++ + Q M N + E+G+VI + VLV GV LI NL ++P+
Sbjct: 880 QGIYMRAVVIEIFQHMMNVVTLESGHVISINYKMQKVLVDTHGVPNYILIAERNLKQSPR 939
Query: 958 SAEFI 962
+ +
Sbjct: 940 KLQLL 944
>SPCC16C4.09 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit Rrp44/Dis3
Length = 1066
Score = 148 bits (374), Expect = 4e-35
Identities = 183/776 (23%), Positives = 304/776 (38%), Gaps = 59/776 (7%)
Query: 261 FPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSLPTFKKPVLVLGQKNLNRAFNGD 320
F Y S I L L G + +S+ N + VS+ V + G K+ NRA GD
Sbjct: 287 FSPYLPQSSIPALLAERRLVTGILIVSKKNRSDAFVSVDGLDAEVFICGSKDRNRALEGD 346
Query: 321 LVVVELLPQSE-WKAPSTVTMDSEHFNVXXXXXXXXXXXXXXXSGVLDDSGAIMSDKDRR 379
+V +ELL E W + + + AI + D +
Sbjct: 347 VVAIELLDVDEVWAGKLEKEENRRRKDPISTRGSFDNLRIDAVPFEVPQRSAIKARDDEQ 406
Query: 380 LLAQSAILAQKSN-----KVQPTARVVGITRRSWRQY----VGQITPTSVDPQ----SSG 426
+ Q+ L + K + VV + +R+ Q +G + P+S + SSG
Sbjct: 407 VEGQTLFLLDQKQLGADEKPKYAGHVVAVLQRAPGQVFSGTLGILRPSSAANKERQTSSG 466
Query: 427 TQN------------VFVILMDKCLPKIRIRTRLAK-------QLLNKRIVI-SVDCWPE 466
Q V+ DK +P I I T A Q +R+ + S+ WP
Sbjct: 467 NQGSSNNSGNDKPKIVWFKPSDKRVPLIAIPTEQAPTDFLGNDQAYAQRLFLASIKRWPV 526
Query: 467 NYRYPLGHFVRDLGDIESAQAETEALLLEHDVEYRPFSKKV-------LDCLPKEGHDWK 519
+P G V +LG ++S A+ ALL + V P+ L+ L +
Sbjct: 527 TSLHPFGMLVGELGSMDSMSAQVSALLHDTGVHSEPWEGSAATSAVTALNALSDNFLNVA 586
Query: 520 APEDLTDPEA---IRNDPLLPSRKDFRDKLICSIDPPGCVD-IDDALHAKQLPNGNWEVG 575
D + ++ND + + + +I+ D + A H + G + VG
Sbjct: 587 GCADYRSEDVFLFVKNDVSKAAVSEVKQHE-SNINSSSATDFVSSAFHIRPTSTG-YHVG 644
Query: 576 VHIADVTHFVKPGTALDAEGASRGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVV 635
+H+ DV+ ++PG+ LD E R +V L K + + P LG L SL+ D + S++
Sbjct: 645 IHVTDVSRVIEPGSPLDRELQRRSIAVNLCQKSVPLFPTTLGEAL-SLREDKDCYTMSLL 703
Query: 636 WELDNDANIVGVDFTKSVIRSREAFSYEKAQNRIDDETAKDELTLGMRAXXXXXXXXXXX 695
++ + I G +VIR R+A++ ++A DE + + L +
Sbjct: 704 LDVSSTGKIRGTWIGWAVIRPRKAYTMKEA-----DELLQTDARLRLFHTVSSRLRTHHL 758
Query: 696 RLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLDTNSLVEEFMLLANISVARKIYEAFP 755
D + +S + DPNE + L E + AN +VA + + F
Sbjct: 759 GTDVPLSRYCRLVRRWDEESCSFDPNETNLFISSAVEVLRETLLDAANRAVASHLRQEFR 818
Query: 756 QTAMLRRHAAPPSTNFELLNEMLQVRKGMSISLESSKALADSLDRCEDPN-DSYLNTLIR 814
+ A LR P N +L M ++ G + L S+K+L SL ED + L
Sbjct: 819 ENAFLRTQRLPSRENCRILQSM-AIQMGCVLDLSSTKSLLRSLSLIEDDTVRNILQLYYY 877
Query: 815 IMSTRCMMAAQYFHAGAFSYADFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEA 874
++ R + Q + S D THFT+P+ RY D+V H QL + E
Sbjct: 878 KVTPRAVYEMQKYKGNLASQMMSLGIEDESDDLTHFTAPLERYGDIVVHYQLQLLLRGEL 937
Query: 875 LDLSHRDKQKMEMICRNINKKHRNAQFAGRASIEYYVGQVMRNNESTETGYVIKVFNNGI 934
S + + + +++ ++FA SI + ++ + G V V +
Sbjct: 938 --ASEKRLRVWSQAANDASRRLVISKFAQETSIHIKIFSDWAESQVWQDGLVCFVAPSYF 995
Query: 935 AVLVPKFGVEGLIRLENLTENPQSAEFIEDQFSLRFVDKNGVSKEVSVFDKVEVQL 990
V P G+E + L+ L N F EDQ L D++G V + V+V+L
Sbjct: 996 DVFFPSLGMEKRVHLDLL--NLTHVRFEEDQGILSLYDESGAVTVVKLLTSVKVKL 1049
>YDR293c [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit Rrp44/Dis3
Length = 1250
Score = 139 bits (350), Expect = 2e-32
Identities = 141/543 (25%), Positives = 235/543 (42%), Gaps = 58/543 (10%)
Query: 436 DKCLPKIRIRTRLAKQ--------LLNKRIVISVDCWPENYRYPLGHFVRDLGDIESAQA 487
DK +P I I T LA + K V S+ WP +P G V +LGDI
Sbjct: 588 DKKVPLIAIPTELAPKDFVENADKYSEKLFVASIKRWPITSLHPFGILVSELGDIHDPDT 647
Query: 488 ETEALLLEHDVEYRPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRNDPL----LPSRKDFR 543
E +++L +++ L E D K P+ + + + PL L R++F
Sbjct: 648 EIDSILRDNNF------------LSNEYLDQKNPQK--EKPSFQPLPLTAESLEYRRNFT 693
Query: 544 DKL---ICSIDPPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGT 600
D I +I G V + ALH + NG E+G H+ DVT ++ G+++D R +
Sbjct: 694 DTNEYNIFAISELGWVS-EFALHVRNNGNGTLELGCHVVDVTSHIEEGSSVDRRARKRSS 752
Query: 601 SVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVVWELDNDA-NIVGVDFTKSVIRSREA 659
+V++ K +++LP +L SL P + SVV+ LD+ I +S I
Sbjct: 753 AVFMPQKLVNLLPQSFNDEL-SLAPGKESATLSVVYTLDSSTLRIKSTWVGESTISPSNI 811
Query: 660 FSYEKAQNRIDDETAKDELTLGMRAXXXXXXXXXXXRLDAGALNLASPEVKVHMDSETSD 719
S E+ +D++ + T + R++ L P + + E+ D
Sbjct: 812 LSLEQ----LDEKLSTGSPTSYLSTVQEIARSFYARRINDPEATLL-PTLSL---LESLD 863
Query: 720 PNEVEIK-KLLDTNS---LVEEFMLLANISVARKIYEAFPQTAMLRRHAAPPSTNFELLN 775
+V++ +LD ++ E N +VA KIY A+LRR P +T
Sbjct: 864 DEKVKVDLNILDRTLGFVVINEIKRKVNSTVAEKIYTKLGDLALLRRQMQPIATKMASFR 923
Query: 776 EMLQVRKGMSISLESSKALADSLDRCEDPNDSYLNTLIRIMSTRCMMAAQYFHAGAFSYA 835
+ +Q G + ++ L + + +D + + I I+ + M A+YF AG
Sbjct: 924 KKIQ-NFGYNFDTNTADELIKGVLKIKDDD---VRVGIEILLFKTMPRARYFIAGKVDPD 979
Query: 836 DFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEALDLSHRDKQKMEMICRNINKK 895
+ HY L + IYTHFT+P+RRY D V HRQL I D + +++ N K
Sbjct: 980 QYGHYALNLPIYTHFTAPMRRYADHVVHRQLKAVIHDTPYT---EDMEALKITSEYCNFK 1036
Query: 896 HRNAQFAGRASIEYYVGQVMRNNESTETGY------VIKVFNNGIAVLVPKFGVEGLIRL 949
A A +I + + + N+ TG V++V+ + V +P+FG+E +
Sbjct: 1037 KDCAYQAQEQAIHLLLCKTI-NDMGNTTGQLLTMATVLQVYESSFDVFIPEFGIEKRVHG 1095
Query: 950 ENL 952
+ L
Sbjct: 1096 DQL 1098
>SPBC609.01 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit Rrp44/Dis3
Length = 1157
Score = 120 bits (301), Expect = 1e-26
Identities = 166/827 (20%), Positives = 299/827 (36%), Gaps = 125/827 (15%)
Query: 261 FPEYYSTSRIMGGLKNGSLYQGSIQISEYNFLEGTVSLPTFKKPVLVLGQKNLNRAFNGD 320
F Y + + + G L G++ I+ N + V +P+ + G K+ NR GD
Sbjct: 292 FLPYLPQASLPKFIGTGKLLVGTLHINRKNRSDAYVITDVLDEPIFICGSKDRNRTLEGD 351
Query: 321 LVVVELLPQSEWKAPSTVTMDSEHFNVXXXXXXXXXXXXXXXSGVLDDSGAIMSDKDRRL 380
LV VELL +E + + + ++ S + +R +
Sbjct: 352 LVAVELLDVNEIMQTKR-EKEEKKIRRNLSLSGSSKYSVNSKAKMMSISTPMALGMNRGV 410
Query: 381 LAQSAILAQKSNKVQPTARV------VGITRRSWRQYVGQI------------------- 415
L+ + ++ N + T + V +T S +Y G +
Sbjct: 411 LSFERSIEKRKNDYEVTGQSLSFVDDVSLTPDSAPKYAGHVVAVLNRPSGETCSGTLALY 470
Query: 416 ----------------TPTSVDPQSSGTQNVFVILMDKCLPKIRIRTRLAKQLL------ 453
+ TS G + V+ DK +P I I +
Sbjct: 471 RPNSLALKNQSSHRRNSSTSSGETGKGPKIVWFKPSDKRIPLIAISSDQVPPTFFTNNDD 530
Query: 454 --NKRIVISVDCWPENYRYPLGHFVRDLGDIESAQAETEALLLEHDVEYRPFSKKVLDCL 511
+K + + WP +P G +G I + E +A+L + F + + C+
Sbjct: 531 FKDKVFLAGIKRWPTTSLHPFGTLYESIGTIGDPKVEYKAILHDFSCHTYDFPESLSHCV 590
Query: 512 PKEGHDWKAPEDLTDPEAIRNDPLLPSRKDFRDKLICSIDPPGCVDIDDALHAKQLP-NG 570
+ A E L R + RDKL I D ALH +G
Sbjct: 591 KRLPTPIPAEE-------------LQKRYNLRDKLTFMIGTR-----DYALHIDTGSIDG 632
Query: 571 NWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRF 630
+G+H+ADV ++VK LD E A+R + V L+ + LP + ++ ++ + D
Sbjct: 633 VITLGIHVADVAYYVKQDMPLDDEAANRVSEVQLLQGSVPFLPKKVSEEISLIEGH-DCL 691
Query: 631 AFSVVWELD-NDANIVGVDFTKSVIRSREAFSYEKAQNRIDDETAKDELTLGMRAXXXXX 689
S+V +LD ++ SVI S E AQ + A ++
Sbjct: 692 TISIVVQLDLKSGAVLQCSLGPSVIHPSSFISLESAQANLQTNEA-------LQLVDASA 744
Query: 690 XXXXXXRLDAGA-LNLASPEVKVHMDSETSDPNEVEIK--KLLDTNSLVEEFMLLANISV 746
RL L+L S D + + + + + +++ N V
Sbjct: 745 HVLTKLRLKTDKKLDLQSLYCFEFCDGQIPNIQNINMSIFEAFPIACSLQQIEHWVNEKV 804
Query: 747 ARKIYEAFPQTAMLRRHAAPPSTNFELLNEMLQVRKGMSISLESSKALADSLDRCEDPND 806
A + FP +LR++ P ++ V + ++L +S ++ + D
Sbjct: 805 ASHLMSVFPSKVILRKNQRPSD-----FASLVAVSELTGVNLSASSTPSEIMTEIATTKD 859
Query: 807 SYLNTLIRIMSTRCMMAAQYFHAGAFSYADFRHYGLAVDIYTHFTSPIRRYCDVVAHRQL 866
L+++ R ++Y G + D H+ + YTHF P RRY D+ RQL
Sbjct: 860 KRTKMLLQLTLRRMCNESEYT-IGTSNAKDVSHFVFSCPYYTHFCHPTRRYIDICVQRQL 918
Query: 867 AGAI-GYEALDLSHRDKQKMEMICRNINKKHRNAQFAGRASIEYYVGQV-----MRNNES 920
A G +R + C ++ +RNAQ S+ Y+ Q+ +R+
Sbjct: 919 REAFDGRPDFSKDYRSLLSITQSCNTLSNFYRNAQ---EKSLHAYLCQLLHSINLRSGLV 975
Query: 921 TETGYVIKVFNNGIAVLVPKFGVE-----GLIRLENLTENPQSAEF-------------- 961
+V+ V I +++ +FG+E L+ L N N Q E
Sbjct: 976 KHKAFVLAVDQEYIDIVIYEFGLERRISLDLLPLSNCDFNEQKHELYLSWRTNASFFYAS 1035
Query: 962 --------IEDQFSLRFVDKNGVSKEVSVFDKVEVQLKSVLDPATSK 1000
+ F +F+D NG+ K++ D ++ Q++ + + A S+
Sbjct: 1036 SSLEIDTPCFNDFKKKFLDSNGMCKQIC--DMMDAQVRDLANAAESQ 1080
>Hs21703358_2 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 952
Score = 75.9 bits (185), Expect = 3e-13
Identities = 66/259 (25%), Positives = 110/259 (41%), Gaps = 16/259 (6%)
Query: 413 GQITPTSVDPQSSGTQNVFVILMDKCLPKIRIRTRLAKQLLNKRIVISVDCWPENYRYPL 472
G +T V +Q L L ++ + A+ ++ + + W + + YPL
Sbjct: 22 GSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLERLTAEARHSRLFWVQIVLWRQGFYYPL 81
Query: 473 GHFVRDLGDIESAQAETEALLLEHDVEYRPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRN 532
G L + + + L LE+ + P + + + ++ H T+ +
Sbjct: 82 GIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITKVLQKYH--------TELGRVAG 133
Query: 533 DPLLPSRKDFRDKLICSIDPPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALD 592
R+D R L ++DP G ++DDAL + L EV VHI DV FV LD
Sbjct: 134 -----RREDCRAFLTFTVDPQGACNLDDALSVRDL-GPRCEVAVHITDVASFVPRDGVLD 187
Query: 593 AEGASRGTSVYLVDKR-IDMLPMLLGTDLCSLKPYVDRFAFSVVWELDN-DANIVGVDFT 650
E +G + Y + + MLP L D+ SL P DR A S+ ++ + + F
Sbjct: 188 VEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTMEKASGQLKSLRFA 247
Query: 651 KSVIRSREAFSYEKAQNRI 669
SV++S SYE+A+ I
Sbjct: 248 PSVVQSDRQLSYEEAEEVI 266
Score = 54.3 bits (129), Expect = 9e-07
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 839 HYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEALDLSHRDKQKMEMICRNINKKHRN 898
HY L VD YT TSPIRRY DVV RQ+ A+G+ S RD ++ +C+ + +H
Sbjct: 461 HYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARD---IDGLCQAFSLQHAL 517
Query: 899 AQFAGRASIEYYVGQVMRNNESTETGYVIKV 929
AQ R + ++ ++ + G+V+ V
Sbjct: 518 AQSYQRRARSLHLAVQLKAQPLDKLGFVVDV 548
>Hs14769950_2 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 968
Score = 75.9 bits (185), Expect = 3e-13
Identities = 66/259 (25%), Positives = 110/259 (41%), Gaps = 16/259 (6%)
Query: 413 GQITPTSVDPQSSGTQNVFVILMDKCLPKIRIRTRLAKQLLNKRIVISVDCWPENYRYPL 472
G +T V +Q L L ++ + A+ ++ + + W + + YPL
Sbjct: 38 GSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLERLTAEARHSRLFWVQIVLWRQGFYYPL 97
Query: 473 GHFVRDLGDIESAQAETEALLLEHDVEYRPFSKKVLDCLPKEGHDWKAPEDLTDPEAIRN 532
G L + + + L LE+ + P + + + ++ H T+ +
Sbjct: 98 GIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITKVLQKYH--------TELGRVAG 149
Query: 533 DPLLPSRKDFRDKLICSIDPPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALD 592
R+D R L ++DP G ++DDAL + L EV VHI DV FV LD
Sbjct: 150 -----RREDCRAFLTFTVDPQGACNLDDALSVRDL-GPRCEVAVHITDVASFVPRDGVLD 203
Query: 593 AEGASRGTSVYLVDKR-IDMLPMLLGTDLCSLKPYVDRFAFSVVWELDN-DANIVGVDFT 650
E +G + Y + + MLP L D+ SL P DR A S+ ++ + + F
Sbjct: 204 VEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTMEKASGQLKSLRFA 263
Query: 651 KSVIRSREAFSYEKAQNRI 669
SV++S SYE+A+ I
Sbjct: 264 PSVVQSDRQLSYEEAEEVI 282
Score = 54.3 bits (129), Expect = 9e-07
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 839 HYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEALDLSHRDKQKMEMICRNINKKHRN 898
HY L VD YT TSPIRRY DVV RQ+ A+G+ S RD ++ +C+ + +H
Sbjct: 477 HYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARD---IDGLCQAFSLQHAL 533
Query: 899 AQFAGRASIEYYVGQVMRNNESTETGYVIKV 929
AQ R + ++ ++ + G+V+ V
Sbjct: 534 AQSYQRRARSLHLAVQLKAQPLDKLGFVVDV 564
>At5g02250 [J] KOG2102 Exosomal 3'-5' exoribonuclease complex subunit
Rrp44/Dis3
Length = 782
Score = 57.0 bits (136), Expect = 1e-07
Identities = 35/103 (33%), Positives = 53/103 (50%)
Query: 539 RKDFRDKLICSIDPPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKPGTALDAEGASR 598
R D + +ID ++DDAL A +L +G ++ +H+AD +V PG+ +D E R
Sbjct: 399 RIDLTHLKVYAIDVDEADELDDALSATRLQDGRIKIWIHVADPARYVTPGSKVDREARRR 458
Query: 599 GTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVVWELDND 641
GTSV+L M P L + SL+ + A SV L +D
Sbjct: 459 GTSVFLPTATYPMFPEKLAMEGMSLRQGENCNAVSVSVVLRSD 501
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,696,798
Number of Sequences: 60738
Number of extensions: 2506818
Number of successful extensions: 5724
Number of sequences better than 1.0e-05: 19
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5594
Number of HSP's gapped (non-prelim): 37
length of query: 1008
length of database: 30,389,216
effective HSP length: 116
effective length of query: 892
effective length of database: 23,343,608
effective search space: 20822498336
effective search space used: 20822498336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)