ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI3157 good R KOG0017 General function prediction only FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI3157 1058262 1055149 -1038
(1038 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YAR009c [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 645 0.0
YPL257w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 643 0.0
YOL103w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 643 0.0
YML039w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 643 0.0
YLR157c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 643 0.0
YER138c [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 643 0.0
YDR365w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 641 0.0
YDR210w-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 641 0.0
YGR038c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 640 0.0
YJR027w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 640 0.0
YDR098c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 639 0.0
YPR137c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 638 0.0
YLR410w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 637 0.0
YPR158w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 635 0.0
YDR316w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 635 0.0
YML045w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 635 0.0
YCL019w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 635 0.0
YLR227w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 634 0.0
YHR214c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 634 0.0
YGR161w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 634 0.0
YFL002w-a [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 634 0.0
YOR343c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 633 0.0
YMR050c [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 633 0.0
YDR210w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 633 0.0
YER160c [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 632 0.0
YBL101w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 632 0.0
YDR261w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 632 0.0
YOR192c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 631 e-180
YGR027w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 631 e-180
YJR029w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 631 e-180
YDR034c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 630 e-180
YPR158c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 630 e-180
YMR045c [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 629 e-180
YOR142w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 629 e-180
YLR035c-a [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 629 e-179
YGR161c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 629 e-179
YBL005w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 628 e-179
YNL284c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 625 e-178
YBR012w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 624 e-178
YDR261c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 516 e-146
YJL113w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 217 7e-56
YHL009w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 217 7e-56
At3g29775 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 151 6e-36
At3g60170 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 148 5e-35
At2g21460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 146 1e-34
At1g27285 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 144 7e-34
At2g05390 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 140 8e-33
At3g45520 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 140 1e-32
At1g58140 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 139 2e-32
At1g48710 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 137 9e-32
At1g11265 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 136 1e-31
At3g61330 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 135 3e-31
At2g15650 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 135 3e-31
At3g29510 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 134 6e-31
At2g07550 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 134 1e-30
At1g21945 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 133 2e-30
At1g37110 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 132 2e-30
At2g13930 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 132 4e-30
At1g32590 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 129 3e-29
At3g25450 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 127 1e-28
At1g53810 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 125 3e-28
At4g10460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 123 2e-27
At1g59265 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 123 2e-27
At5g35820 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 122 4e-27
At1g44510 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 122 4e-27
At1g58889 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 121 5e-27
At2g13940 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 120 1e-26
At1g56675 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 120 1e-26
At2g23330 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 119 2e-26
At4g02960 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 119 2e-26
At4g03810 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 117 1e-25
At4g16870 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 114 1e-24
At4g23160_1 [R] KOG0017 FOG: Transposon-encoded proteins with TY... 110 1e-23
At2g16670 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 109 3e-23
At4g27210 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 108 4e-23
At2g24660 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 108 6e-23
At1g62460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 106 2e-22
At4g17450 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 104 8e-22
At2g16000 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 104 8e-22
At4g10690 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 103 1e-21
At1g33817 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 103 1e-21
At1g70010 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 103 2e-21
At2g19840 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 102 4e-21
At4g22040 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 97 1e-19
At2g15870 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 97 1e-19
At4g10990_1 [R] KOG0017 FOG: Transposon-encoded proteins with TY... 97 2e-19
At1g57640 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 96 2e-19
At2g20460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 96 4e-19
At4g27200 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 94 8e-19
At1g31210 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 92 5e-18
At4g21360 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 91 7e-18
At3g59720 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 90 2e-17
At1g47650_1 [R] KOG0017 FOG: Transposon-encoded proteins with TY... 89 3e-17
At4g07810 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 89 4e-17
At4g04410 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 89 5e-17
At2g06950 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 89 5e-17
At1g36035 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 87 1e-16
At2g07420 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 87 2e-16
At2g15700 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 86 3e-16
At2g06840 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 85 5e-16
At1g34545 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 84 1e-15
At2g17490 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 83 2e-15
At1g60020 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 83 3e-15
At4g28900 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 81 7e-15
At2g15920 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 81 7e-15
At2g07010 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 81 1e-14
At1g26990 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 80 2e-14
At4g04290 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 79 3e-14
At1g34904 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 79 3e-14
At2g04820 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 77 2e-13
At2g14930 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 76 3e-13
At4g14460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 75 5e-13
At4g16010 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 74 2e-12
At1g36620 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 74 2e-12
At1g43715 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 72 3e-12
At1g47520 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 71 8e-12
At1g34100_1 [R] KOG0017 FOG: Transposon-encoded proteins with TY... 70 1e-11
At4g04440 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 68 6e-11
At4g04380 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 65 4e-10
At2g04490 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 62 4e-09
At4g04600 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 61 1e-08
At1g36110 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 59 3e-08
At2g21310 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 59 5e-08
At1g47360 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 58 7e-08
At2g05960 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 55 7e-07
At1g34090 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 52 5e-06
At2g10610 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 51 8e-06
>YAR009c [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1196
Score = 645 bits (1664), Expect = 0.0
Identities = 407/1057 (38%), Positives = 587/1057 (55%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 219 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 278
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 279 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 337
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 338 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 382
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 383 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 439
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 440 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 493
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 494 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 550
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 551 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 599
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 600 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 639
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 640 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 686
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM+TW +++ D I +R+INSMFIF KRD + K R VAR
Sbjct: 687 EKEKYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 746
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 747 GDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 806
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 807 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 863
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 864 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 920
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+KSL +KLP L VPL ++ + PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 921 YMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 979
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 980 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1039
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1040 TEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1099
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + L+ + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1100 SVPLLNNLSYLIQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1158
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1159 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1195
>YPL257w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 643 bits (1659), Expect = 0.0
Identities = 407/1057 (38%), Positives = 583/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N +
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSRQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW ++E D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 TEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + L+ + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSYLIQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YOL103w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 643 bits (1659), Expect = 0.0
Identities = 407/1057 (38%), Positives = 583/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW ++E D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 TEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + L+ + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSYLIQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YML039w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 643 bits (1659), Expect = 0.0
Identities = 407/1057 (38%), Positives = 583/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW ++E D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 TEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + L+ + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSYLIQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YLR157c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 643 bits (1659), Expect = 0.0
Identities = 407/1057 (38%), Positives = 583/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N +
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSRQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW ++E D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 TEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + L+ + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSYLIQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YER138c [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 643 bits (1659), Expect = 0.0
Identities = 407/1057 (38%), Positives = 583/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW ++E D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 TEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + L+ + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSYLIQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YDR365w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 641 bits (1654), Expect = 0.0
Identities = 406/1057 (38%), Positives = 581/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNYLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N +
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSRQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW ++E D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIQQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ +N I KL ++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLG---ESDEEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G ++L NGK I KS+K LTC S+TEAEI+++S
Sbjct: 1599 TKPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
+ L + LV + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1659 AIPLLNNLSHLVQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YDR210w-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 641 bits (1654), Expect = 0.0
Identities = 403/1057 (38%), Positives = 586/1057 (55%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKDSRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQQSNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELYPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G ++ P A + S+ E +AS + DF
Sbjct: 999 PSKKRSSTPQISDIESTDSG---GMHRLDVPLLAPMSQSNTH--ESSYASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM+TW +++ D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+KSL +KLP L VPL ++ + PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G ++L NGK I KS+K LTC S+TEAEI+++S
Sbjct: 1599 TKPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
+ L + LV + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1659 AIPLLNNLSHLVQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YGR038c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 640 bits (1652), Expect = 0.0
Identities = 404/1057 (38%), Positives = 585/1057 (55%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM+TW +++ D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G ++L NGK I KS+K LTC S+TEAEI+++S
Sbjct: 1599 TEPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
+ L + LV + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1659 AIPLLNNLSHLVQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YJR027w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 640 bits (1650), Expect = 0.0
Identities = 405/1057 (38%), Positives = 583/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW ++E D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KS YGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSHYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G ++L NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 TEPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + L+ + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSYLIQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YDR098c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 639 bits (1647), Expect = 0.0
Identities = 403/1057 (38%), Positives = 585/1057 (55%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM+TW +++ D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++ +
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---EGDNEIQYDILGLEIKYQRSK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+KSL +KLP L VPL ++ + PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G ++L NGK I KS+K LTC S+TEAEI+++S
Sbjct: 1599 TKPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
+ L + LV + LN K IIK TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1659 AIPLLNNLSHLVQE-LNKKPIIKGSLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YPR137c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 638 bits (1645), Expect = 0.0
Identities = 403/1057 (38%), Positives = 584/1057 (55%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM+TW +++ D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KS YGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSHYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G ++L NGK I KS+K LTC S+TEAEI+++S
Sbjct: 1599 TEPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
+ L + LV + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE
Sbjct: 1659 AIPLLNNLSHLVQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YLR410w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 637 bits (1642), Expect = 0.0
Identities = 403/1068 (37%), Positives = 583/1068 (53%), Gaps = 103/1068 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+LNDCRT L + LP LW+ A+ FS +RN+ V+ S R A +AGL +LPFG
Sbjct: 774 LLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFG 833
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+
Sbjct: 834 QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQD------ 887
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
+Q +++Q N + + F+++ N + +N +I N T++
Sbjct: 888 NQSKLDQF----------NYDTLTFDDDLNRLTA-----HNQSFIEQNE-------TEQS 925
Query: 181 ADFGLEYGGDTLSPVTPSDAGDPFTPSDAGDSFTPSDAGDQ-----FTPAPTDNNRRETT 235
D E D S + + DP + S P + P D + E
Sbjct: 926 YDQNTESDHDYQSEIEINS--DPLVNDFSSQSMNPLQLDHEPVQKVRAPKEVDADISEYN 983
Query: 236 SSPEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSP 295
P P+ I +S + M I R +ST ++ ++ SP ++
Sbjct: 984 ILPSPVRSRTPHIINKESTE--MGGTIESDTTSPRHSSTFTARN--QKRPGSPNDMIDLT 1039
Query: 296 IID----GLE----TNTNIQEEPLLPPIIDGLDTNINLQEETQLPPIIDGLDTN------ 341
D GLE T EEP + DTNI + P I D +
Sbjct: 1040 SQDRVNYGLENIKTTRLGGTEEPYIQR---NSDTNIKYRTTNSTPSIDDRSSNSESTTPI 1096
Query: 342 INXXXXXXXXXXXXXXXXXXXXXAADSVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKG 401
I+ ++D P+ S + T + L +P+ + +K
Sbjct: 1097 ISIETKAVCDNTPSIDTDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLT-HKS 1155
Query: 402 PRTTTNSFEPSYGGGTYTENYNHPTLEEVFESIE-RDPFNL--TSQKRPRSSNTYRESDQ 458
P T++ +++ H + S+ D N+ T++ + RS
Sbjct: 1156 PTDTSD----------VSKDIPHIHSRQTNSSLGGMDDSNVLTTTKSKKRSLE------- 1198
Query: 459 DSYDSGGDFDEEQEQECSSD-----NSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINY 513
D E E E S D N + P + +R+N + AI+ K I + T++ Y
Sbjct: 1199 ---------DNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIAAIKGVKSIKPVRTTLRY 1249
Query: 514 SEAISRNRNENEKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKR 572
EAI+ N++ EK + AY KEI+QL KM+TW + + D I +++INSMFIF KR
Sbjct: 1250 DEAITYNKDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRNDIDPKKVINSMFIFNKKR 1309
Query: 573 DNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYA 632
D + K R VARGD Q +TYD D ++ TVHH ALMT L++ALD++ QLDISSAYLYA
Sbjct: 1310 DGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYA 1369
Query: 633 DLKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCV 692
D+KEELYIR PPH+ +K+L+L KSLYGLKQSGANW IK +L+ C + E R W CV
Sbjct: 1370 DIKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCV 1429
Query: 693 FTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDI 752
F + + +CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDI
Sbjct: 1430 FKNSQ---VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ERDNEIQYDI 1483
Query: 753 LGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQ 812
LG+E++Y++ +YMK GM+KSL +KLP L VPL ++ + PG PG YI ++L +D+
Sbjct: 1484 LGLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQ-DELEIDED 1542
Query: 813 DYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTR 872
+YK+KV +Q+L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTR
Sbjct: 1543 EYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTR 1602
Query: 873 DKKLIWKYSGP--KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVS 930
DK+LIW + P +N++ AISDA++ +KSQ G ++L NGK I KS+K LTC S
Sbjct: 1603 DKQLIWHKNKPTKPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTS 1662
Query: 931 STEAEIYSISNCVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHT 989
+TEAEI+++S + L + LV + LN K IIK L TDS+ ++IIK + +F +
Sbjct: 1663 TTEAEIHAVSEAIPLLNNLSHLVQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFF 1721
Query: 990 GSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
G++AMR+RDE + L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1722 GTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1769
>YPR158w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1756
Score = 635 bits (1639), Expect = 0.0
Identities = 405/1057 (38%), Positives = 583/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 779 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 838
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 839 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 897
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 898 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 942
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 943 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 999
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 1000 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1053
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1054 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1110
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 1111 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 1159
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1160 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1199
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1200 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1246
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM+TW +++ D I +R+INSMFIF KRD + K R VAR
Sbjct: 1247 EKEKYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVAR 1306
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1307 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1366
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1367 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1423
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1424 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1480
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1481 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1539
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1540 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1599
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1600 TEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1659
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + LV + LN K I K L TDS+ ++II + +F + G++AMR+RDE
Sbjct: 1660 SVPLLNNLSHLVQE-LNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEV 1718
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1719 SGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWI 1755
>YDR316w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 635 bits (1639), Expect = 0.0
Identities = 405/1057 (38%), Positives = 583/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM+TW +++ D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 TEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + LV + LN K I K L TDS+ ++II + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSHLVQE-LNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YML045w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 635 bits (1638), Expect = 0.0
Identities = 405/1057 (38%), Positives = 582/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N ++
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSHQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM+TW +++ D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
+N++ AISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 TEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + LV + LN K I K L TDS+ ++II + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSHLVQE-LNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YCL019w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 635 bits (1638), Expect = 0.0
Identities = 399/1069 (37%), Positives = 573/1069 (53%), Gaps = 105/1069 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+LNDCRT L + LP LW+ A+ FS +RN+ V+ S R A +AGL +LPFG
Sbjct: 774 LLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFG 833
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ ++
Sbjct: 834 QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQDKQSKL- 892
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+++ N + +N +I N T++
Sbjct: 893 ---------------DQFNYDTLTFDDDLNRLTA-----HNQSFIEQNE-------TEQS 925
Query: 181 ADFGLEYGGDTLSPVTPSDAGDPFTPSDAGDSFTPSDAGDQ-----FTPAPTDNNRRETT 235
D E D S + + DP + S P + P D + E
Sbjct: 926 YDQNTESDHDYQSEIEINS--DPLVNDFSSQSINPLQLDKEPVQKVRAPKEVDADISEYN 983
Query: 236 SSPEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSP 295
P P+ I +S + G ES +S+ +A+ ++ + +D +
Sbjct: 984 ILPSPVRSRTPHIINKESTEMG---GTVESDTTSPRHSSTFTARNQKRPGSPNDMIDLTS 1040
Query: 296 ---IIDGLE----TNTNIQEEPLLPPIIDGLDTNINLQEETQLPPIIDGLDTNINXXXXX 348
+ GLE T EEP + DTNI + P I D
Sbjct: 1041 QDRVNYGLENIKTTRLGGTEEPYIQR---NSDTNIKYRTTNSTPSIDD------------ 1085
Query: 349 XXXXXXXXXXXXXXXXAADSVPDTTNPNPSEDDDTINDKLKSI----PIFNGNKYKGPRT 404
S ++T P S + + D SI P + + + P
Sbjct: 1086 -----------------RSSNSESTTPIISIETKAVCDNTPSIDTDPPEYRSSDHATPNI 1128
Query: 405 TTNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSNTYRESDQDSY--- 461
+ + + ++ P L + D R +N+ DS
Sbjct: 1129 MPDKSSKNVTADSILDDLPLPDLTHQSPTDTSDVSKDIPHIHSRQTNSSLGGMDDSNVLT 1188
Query: 462 ----DSGGDFDEEQEQECSSD-----NSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSIN 512
D E E E S D N + P + +R+N + AI+ K I + T++
Sbjct: 1189 TTKSKKRSLEDNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIAAIKGVKSIKPVRTTLR 1248
Query: 513 YSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTK 571
Y EAI+ N++ EK + AY KEI+QL KM+TW + + D I +++INSMFIF K
Sbjct: 1249 YDEAITYNKDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRNDIDPKKVINSMFIFNKK 1308
Query: 572 RDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLY 631
RD + K R VARGD Q +TYD D ++ TVHH ALMT L++ALD++ QLDISSAYLY
Sbjct: 1309 RDGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLY 1368
Query: 632 ADLKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKC 691
AD+KEELYIR PPH+ +K+L+L KSLYGLKQSGANW IK +L+ C + E R W C
Sbjct: 1369 ADIKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSC 1428
Query: 692 VFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYD 751
VF + + +CLFVDDM++ ++ + I+ L K++DTK++N G E D +YD
Sbjct: 1429 VFKNSQ---VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYD 1482
Query: 752 ILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDD 811
ILG+E++Y++ +YMK GM+KSL +KLP L VPL ++ + PG PG YI ++L +D+
Sbjct: 1483 ILGLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQ-DELEIDE 1541
Query: 812 QDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDT 871
+YK+KV +Q+L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDT
Sbjct: 1542 DEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDT 1601
Query: 872 RDKKLIWKYSGP--KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCV 929
RDK+LIW + P +N++ AISDA++ +KSQ G ++L NGK I KS+K LTC
Sbjct: 1602 RDKQLIWHKNKPTKPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCT 1661
Query: 930 SSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKH 988
S+TEAEI+++S + L + LV + LN K IIK L TDS+ ++IIK + +F +
Sbjct: 1662 STTEAEIHAVSEAIPLLNNLSHLVQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRF 1720
Query: 989 TGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
G++AMR+RDE + L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1721 FGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1769
>YLR227w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 634 bits (1636), Expect = 0.0
Identities = 402/1054 (38%), Positives = 583/1054 (55%), Gaps = 94/1054 (8%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSASQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ DS S+ + P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTE--DSKPISEINLR-APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E H + + S
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH-ESSHASKSKDFRHSDSY 1054
Query: 298 DGLETN-TNIQ-------EEPLLPPIIDGLDTNINLQEETQLPPIIDGLDTNINXXXXXX 349
ETN TN+ +P I D +T + + P ID N
Sbjct: 1055 SNNETNHTNVPISSTGGTNNKTVPQISDQ-ETEKRIIHRS---PSIDASPPENNSSHNIV 1110
Query: 350 XXXXXXXXXXXXXXXAADSVPDTTNPNPSEDDDT-INDKLKSIPIFNGNKYKGPRTTTNS 408
+ + D P+P + T ++D K +P N + TNS
Sbjct: 1111 PIKTPTTVSEQNTEESI--IADLPLPDPPPEPPTELSDSFKELPPINSRQ-------TNS 1161
Query: 409 FEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSGGDF 467
S GG + Y + S+KR N T + +D++++
Sbjct: 1162 ---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT---- 1198
Query: 468 DEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKL 527
N + P + +R++ + A + K I + T++ Y EAI+ N++ EK
Sbjct: 1199 ----------KNMRSLEPPRSKKRIHLIAAAKAVKSIKPIRTTLRYDEAITYNKDIKEKE 1248
Query: 528 AFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVARGDQ 586
+ AY KE+ QL KM+TW +++ D I +R+INSMFIF KRD + K R VARGD
Sbjct: 1249 KYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVARGDI 1308
Query: 587 QSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHM 646
Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR PPH+
Sbjct: 1309 QHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHL 1368
Query: 647 NARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLF 706
+K+++L KS YGLKQSGANW IK +L+++CG+ E R W CVF + + +CLF
Sbjct: 1369 GMNDKLIRLKKSHYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTICLF 1425
Query: 707 VDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMK 766
VDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+YMK
Sbjct: 1426 VDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGKYMK 1482
Query: 767 FGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVG 826
GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+L+G
Sbjct: 1483 LGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQKLIG 1541
Query: 827 LASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP--K 884
LASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1542 LASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEP 1601
Query: 885 NNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVT 944
+N++ AISDA++ +KSQ G ++L NGK I KS+K LTC S+TEAEI+++S +
Sbjct: 1602 DNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSEAIP 1661
Query: 945 YLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNEL 1003
L + LV + LN K IIK L TDS+ ++IIK + +F + G++AMR+RDE +
Sbjct: 1662 LLNNLSHLVQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGN 1720
Query: 1004 GLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1721 NLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YHR214c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1793
Score = 634 bits (1635), Expect = 0.0
Identities = 401/1050 (38%), Positives = 579/1050 (54%), Gaps = 86/1050 (8%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 816 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 875
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 876 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 934
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 935 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQQSNDLNIESDHDFQ 979
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 980 SDIELHPEQLRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 1036
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G ++ P A + S+ E HAS + DF
Sbjct: 1037 PSKKRSSTPQISDIESTGSG---GMHRLDVPLLAPMSQSNTH--ESSHASKSK-DFRHSD 1090
Query: 298 DGLETNTNIQEEPLLPPIIDGLDTNINLQEETQLPPIID---GLDTNINXXXXXXXXXXX 354
+ TN P+ T E+ II +DT+ +
Sbjct: 1091 SYSDNETNHTNVPISSTGGTNNKTVPQTSEQETEKRIIHRSPSIDTSSSESNSLHHVVPI 1150
Query: 355 XXXXXXXXXXAADSV-PDTTNPN-PSEDDDTINDKLKSIPIFNGNKYKGPRTTTNSFEPS 412
+S+ D P+ P E ++D K +P N ++ TNS S
Sbjct: 1151 KTSDTCPKENTEESIIADLPLPDLPPEPPTELSDSFKELPPINSHQ-------TNS---S 1200
Query: 413 YGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSGGDFDEEQ 471
GG + Y + S+KR N T + +D++++
Sbjct: 1201 LGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT-------- 1236
Query: 472 EQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQN 531
N + P + +R++ + A++ K I + T++ Y EAI+ N++ EK +
Sbjct: 1237 ------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIQ 1290
Query: 532 AYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVARGDQQSLE 590
AY KE+ QL M TW ++ D I +R+INSMFIF KRD + K R VARGD Q +
Sbjct: 1291 AYHKEVNQLLMMKTWDTDRYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVARGDIQHPD 1350
Query: 591 TYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNARN 650
TYDP ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR PPH+ +
Sbjct: 1351 TYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMND 1410
Query: 651 KVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDM 710
K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +CLFVDDM
Sbjct: 1411 KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTICLFVDDM 1467
Query: 711 LVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQ 770
++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+YMK GM+
Sbjct: 1468 ILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGKYMKLGME 1524
Query: 771 KSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASY 830
SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+L+GLASY
Sbjct: 1525 NSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQKLIGLASY 1583
Query: 831 VGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEI 888
VG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P +N++
Sbjct: 1584 VGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKL 1643
Query: 889 TAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRG 948
AISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS V L
Sbjct: 1644 VAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNN 1703
Query: 949 IEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVL 1007
+ LV + LN K I K L TDS+ ++II + +F + G++AMR+RDE + L +
Sbjct: 1704 LSHLVQE-LNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHV 1762
Query: 1008 EYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1763 CYIETKKNIADVMTKPLPIKTFKLLTNKWI 1792
>YGR161w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 634 bits (1634), Expect = 0.0
Identities = 400/1067 (37%), Positives = 580/1067 (53%), Gaps = 101/1067 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+LNDCRT L + LP LW+ A+ FS +RN+ V+ S R A +AGL +LPFG
Sbjct: 774 LLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFG 833
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ ++
Sbjct: 834 QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQDKQSKL- 892
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+++ N + +N +I N T++
Sbjct: 893 ---------------DQFNYDTLTFDDDLNRLTA-----HNQSFIEQNE-------TEQS 925
Query: 181 ADFGLEYGGDTLSPVTPSDAGDPFTPSDAGDSFTPSDAGDQ-----FTPAPTDNNRRETT 235
D E D S + + DP + S P + P D + E
Sbjct: 926 YDQNTESDHDYQSEIEINS--DPLVNDFSSQSINPLQLDKEPVQKVRAPKEVDADISEYN 983
Query: 236 SSPEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSP 295
P I I +S + G ES +S+ +A+ + ++ +D +
Sbjct: 984 ILPSTIRSRTPHIINKESTEMG---GTVESDTTSPRHSSTFTARNQNRPGSTNEMIDLTS 1040
Query: 296 ---IIDGLE----TNTNIQEEPLLPPIIDGLDTNINLQEETQLPPIIDGLDTN------I 342
+ GLE T EEP + DTNI + P I D + I
Sbjct: 1041 QDRVNYGLENIKTTRLGGTEEPYIQR---NSDTNIKYRTTNSTPSIDDRSSNSESTTPII 1097
Query: 343 NXXXXXXXXXXXXXXXXXXXXXAADSVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGP 402
+ ++D P+ S + T + L +P+ + +K P
Sbjct: 1098 SIETKAVCDNTPSIDTDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLT-HKSP 1156
Query: 403 RTTTNSFEPSYGGGTYTENYNHPTLEEVFESIE-RDPFNL--TSQKRPRSSNTYRESDQD 459
T++ +++ H + S+ D N+ T++ + RS
Sbjct: 1157 TDTSD----------VSKDIPHIHSRQTNSSLGGMDDSNVLTTTKSKKRSLE-------- 1198
Query: 460 SYDSGGDFDEEQEQECSSD-----NSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYS 514
D E E E S D N + P + +R+N + AI+ K I + T++ Y
Sbjct: 1199 --------DNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIAAIKGVKSIKPVRTTLRYD 1250
Query: 515 EAISRNRNENEKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRD 573
EAI+ N++ EK + AY KEI+QL KM+TW + + D I +++INSMFIF KRD
Sbjct: 1251 EAITYNKDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRNDIDPKKVINSMFIFNKKRD 1310
Query: 574 NSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYAD 633
+ K R VARGD Q +TYD D ++ TVHH ALMT L++ALD++ QLDISSAYLYAD
Sbjct: 1311 GTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYAD 1370
Query: 634 LKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVF 693
+KEELYIR PPH+ +K+L+L KSLYGLKQSGANW IK +L+ C + E R W CVF
Sbjct: 1371 IKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCVF 1430
Query: 694 TAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDIL 753
+ + +CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDIL
Sbjct: 1431 KNSQ---VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDIL 1484
Query: 754 GVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQD 813
G+E++Y++ +YMK GM+KSL +KLP L VPL ++ + PG PG YI ++L +D+ +
Sbjct: 1485 GLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQ-DELEIDEDE 1543
Query: 814 YKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRD 873
YK+KV +Q+L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRD
Sbjct: 1544 YKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRD 1603
Query: 874 KKLIWKYSGP--KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSS 931
K+LIW + P +N++ AISDA++ +KSQ G ++L NGK I KS+K LTC S+
Sbjct: 1604 KQLIWHKNKPTKPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTST 1663
Query: 932 TEAEIYSISNCVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTG 990
TEAEI+++S + L + LV + LN K IIK L TDS+ ++IIK + +F + G
Sbjct: 1664 TEAEIHAVSEAIPLLNNLSHLVQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFG 1722
Query: 991 SRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
++AMR+RDE + L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1723 TKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1769
>YFL002w-a [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 634 bits (1634), Expect = 0.0
Identities = 400/1067 (37%), Positives = 580/1067 (53%), Gaps = 101/1067 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+LNDCRT L + LP LW+ A+ FS +RN+ V+ S R A +AGL +LPFG
Sbjct: 774 LLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFG 833
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ ++
Sbjct: 834 QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQDKQSKL- 892
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+++ N + +N +I N T++
Sbjct: 893 ---------------DQFNYDTLTFDDDLNRLTA-----HNQSFIEQNE-------TEQS 925
Query: 181 ADFGLEYGGDTLSPVTPSDAGDPFTPSDAGDSFTPSDAGDQ-----FTPAPTDNNRRETT 235
D E D S + + DP + S P + P D + E
Sbjct: 926 YDQNTESDHDYQSEIEINS--DPLVNDFSSQSINPLQLDKEPVQKVRAPKEVDADISEYN 983
Query: 236 SSPEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSP 295
P I I +S + G ES +S+ +A+ + ++ +D +
Sbjct: 984 ILPSTIRSRTPHIINKESTEMG---GTVESDTTSPRHSSTFTARNQNRPGSTNEMIDLTS 1040
Query: 296 ---IIDGLE----TNTNIQEEPLLPPIIDGLDTNINLQEETQLPPIIDGLDTN------I 342
+ GLE T EEP + DTNI + P I D + I
Sbjct: 1041 QDRVNYGLENIKTTRLGGTEEPYIQR---NSDTNIKYRTTNSTPSIDDRSSNSESTTPII 1097
Query: 343 NXXXXXXXXXXXXXXXXXXXXXAADSVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGP 402
+ ++D P+ S + T + L +P+ + +K P
Sbjct: 1098 SIETKAVCDNTPSIDTDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLT-HKSP 1156
Query: 403 RTTTNSFEPSYGGGTYTENYNHPTLEEVFESIE-RDPFNL--TSQKRPRSSNTYRESDQD 459
T++ +++ H + S+ D N+ T++ + RS
Sbjct: 1157 TDTSD----------VSKDIPHIHSRQTNSSLGGMDDSNVLTTTKSKKRSLE-------- 1198
Query: 460 SYDSGGDFDEEQEQECSSD-----NSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYS 514
D E E E S D N + P + +R+N + AI+ K I + T++ Y
Sbjct: 1199 --------DNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIAAIKGVKSIKPVRTTLRYD 1250
Query: 515 EAISRNRNENEKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRD 573
EAI+ N++ EK + AY KEI+QL KM+TW + + D I +++INSMFIF KRD
Sbjct: 1251 EAITYNKDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRNDIDPKKVINSMFIFNKKRD 1310
Query: 574 NSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYAD 633
+ K R VARGD Q +TYD D ++ TVHH ALMT L++ALD++ QLDISSAYLYAD
Sbjct: 1311 GTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYAD 1370
Query: 634 LKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVF 693
+KEELYIR PPH+ +K+L+L KSLYGLKQSGANW IK +L+ C + E R W CVF
Sbjct: 1371 IKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCVF 1430
Query: 694 TAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDIL 753
+ + +CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDIL
Sbjct: 1431 KNSQ---VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDIL 1484
Query: 754 GVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQD 813
G+E++Y++ +YMK GM+KSL +KLP L VPL ++ + PG PG YI ++L +D+ +
Sbjct: 1485 GLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQ-DELEIDEDE 1543
Query: 814 YKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRD 873
YK+KV +Q+L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRD
Sbjct: 1544 YKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRD 1603
Query: 874 KKLIWKYSGP--KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSS 931
K+LIW + P +N++ AISDA++ +KSQ G ++L NGK I KS+K LTC S+
Sbjct: 1604 KQLIWHKNKPTKPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTST 1663
Query: 932 TEAEIYSISNCVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTG 990
TEAEI+++S + L + LV + LN K IIK L TDS+ ++IIK + +F + G
Sbjct: 1664 TEAEIHAVSEAIPLLNNLSHLVQE-LNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFG 1722
Query: 991 SRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
++AMR+RDE + L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1723 TKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWI 1769
>YOR343c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 633 bits (1633), Expect = 0.0
Identities = 404/1085 (37%), Positives = 581/1085 (53%), Gaps = 137/1085 (12%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+LNDCRT L + LP LW+ A+ FS +RN+ V+ S R A +AGL +LPFG
Sbjct: 774 LLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFG 833
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEI- 119
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL++ ++
Sbjct: 834 QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQNNQTKLD 893
Query: 120 -----------------------VSQDEIEQMIERIENEDAANMENVEFNEEP--NYAGS 154
+ Q+E EQ ++ D +E N +P N S
Sbjct: 894 QFDYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQNTESDHDYQSEIEINSDPLVNDFSS 953
Query: 155 AQPMPYNTDYIADNINENFETITQEMADFGLEYGGDTLSPVTPSDAGDPFTPSDAGDSFT 214
P D + + +++++ + T+ TP T + G +
Sbjct: 954 QSLNPLQLDKEPVQKVRAPKEVDADISEYNIL--PSTIRSRTPHIINKEST--EMGGTIE 1009
Query: 215 PSDAGDQFTPAPTDNNRRETTSSPEPIGENRDPISPPDSNQDGMNDNINESPEPYRANST 274
+ + T N++ P SP D D +N E +
Sbjct: 1010 SDTTSPRHSSTFTARNQKR-------------PGSPNDMIDLTSQDRVNYGLENIKTTRL 1056
Query: 275 ASSAQPEEEHHASPTNLDF-----SPIIDGLETNTNIQEEPLLPPIIDGLDTNINLQEET 329
+ +P + + S TN+ + +P ID +N++ PII +I +
Sbjct: 1057 GGTEEPYIQRN-SDTNIKYRTTNSTPSIDDRSSNSDSTT-----PII-----SIETKAAC 1105
Query: 330 QLPPIIDGLDTNINXXXXXXXXXXXXXXXXXXXXXAADSV------PDTTNPNPSEDDDT 383
P ID T+ ADS+ PD T+ +P++ D
Sbjct: 1106 DNTPSID---TDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLTHKSPTDTSDV 1162
Query: 384 INDKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNL-- 441
D IP + + TNS S GG D N+
Sbjct: 1163 SKD----IPHIHSRQ-------TNS---SLGG--------------------MDDSNVLT 1188
Query: 442 TSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSD-----NSPARPPNKRIRRVNYVH 496
T++ + RS D E E E S D N + P + +R+N +
Sbjct: 1189 TTKSKKRSLE----------------DNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIA 1232
Query: 497 AIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTW-SEELIDATL 555
AI+ K I + T++ Y EAI+ N++ EK + AY KEI+QL KM+TW + + D
Sbjct: 1233 AIKGVKSIKPVRTTLRYDEAITYNKDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRND 1292
Query: 556 IPKQRIINSMFIFTTKRDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALD 615
I +++INSMFIF KRD + K R VARGD Q +TYD D ++ TVHH ALMT L++ALD
Sbjct: 1293 IDPKKVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALD 1352
Query: 616 HNLTAFQLDISSAYLYADLKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQ 675
++ QLDISSAYLYAD+KEELYIR PPH+ +K+L+L KSLYGLKQSGANW IK
Sbjct: 1353 NDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKS 1412
Query: 676 FLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKV 735
+L+ C + E R W CVF + + +CLFVDDM++ ++ + I+ L K++DTK+
Sbjct: 1413 YLINCCDMQEVRGWSCVFKNSQ---VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKI 1469
Query: 736 VNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPG 795
+N G E D +YDILG+E++Y++ +YMK GM+KSL +KLP L VPL ++ + PG
Sbjct: 1470 INLG---EGDNEIQYDILGLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPG 1526
Query: 796 CPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSA 855
PG YI ++L +D+ +YK+KV +Q+L+GLASYVG+KFRF++LYY+N LAQH L+PS
Sbjct: 1527 QPGHYIDQ-DELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSR 1585
Query: 856 KVLDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEITAISDAAFAGNNDFKSQSGALYLWN 913
+VLD +L Q++WDTRDK+LIW + P +N++ AISDA++ +KSQ G ++L N
Sbjct: 1586 QVLDMTYELIQFMWDTRDKQLIWHKNKPTKPDNKLVAISDASYGNQPYYKSQIGNIFLLN 1645
Query: 914 GKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIK-LKTDSQPA 972
GK I KS+K LTC S+TEAEI+++S + L + LV + LN K IIK L TDS+
Sbjct: 1646 GKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQE-LNKKPIIKGLLTDSRST 1704
Query: 973 MAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
++IIK + +F + G++AMR+RDE + L + YI TK+N AD++TKPL +K FKLL
Sbjct: 1705 ISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLL 1764
Query: 1033 TEDWI 1037
T WI
Sbjct: 1765 TNKWI 1769
>YMR050c [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 633 bits (1632), Expect = 0.0
Identities = 406/1057 (38%), Positives = 577/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N +
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSRQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW ++ D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIQAYHKEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYDP ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L L++ DYK KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-QELELEEDDYKMKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++W+TRDK+LIW S P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
N++ ISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 VKPTNKLVVISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + LV + LN K I K L TDS+ ++II + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSHLVQE-LNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YDR210w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 633 bits (1632), Expect = 0.0
Identities = 404/1085 (37%), Positives = 580/1085 (53%), Gaps = 137/1085 (12%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+LNDCRT L + LP LW+ A+ FS +RN+ V+ S R A +AGL +LPFG
Sbjct: 774 LLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFG 833
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEI- 119
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL++ ++
Sbjct: 834 QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQNNQTKLD 893
Query: 120 -----------------------VSQDEIEQMIERIENEDAANMENVEFNEEP--NYAGS 154
+ Q+E EQ ++ D +E N +P N S
Sbjct: 894 QFDYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQNTESDHDYQSEIEINSDPLVNDFSS 953
Query: 155 AQPMPYNTDYIADNINENFETITQEMADFGLEYGGDTLSPVTPSDAGDPFTPSDAGDSFT 214
P D + + +++++ + T+ TP T + G +
Sbjct: 954 QSLNPLQLDKEPVQKVRAPKEVDADISEYNIL--PSTIRSRTPHIINKEST--EMGGTIE 1009
Query: 215 PSDAGDQFTPAPTDNNRRETTSSPEPIGENRDPISPPDSNQDGMNDNINESPEPYRANST 274
+ + T N++ P SP D D +N E +
Sbjct: 1010 SDTTSPRHSSTFTARNQKR-------------PGSPNDMIDLTSQDRVNYGLENIKTTRL 1056
Query: 275 ASSAQPEEEHHASPTNLDF-----SPIIDGLETNTNIQEEPLLPPIIDGLDTNINLQEET 329
+ +P + + S TN+ + +P ID +N+ PII +I +
Sbjct: 1057 GGTEEPYIQRN-SDTNIKYRTTNSTPSIDDRSSNSESTT-----PII-----SIETKAVC 1105
Query: 330 QLPPIIDGLDTNINXXXXXXXXXXXXXXXXXXXXXAADSV------PDTTNPNPSEDDDT 383
P ID T+ ADS+ PD T+ +P++ D
Sbjct: 1106 DNTPSID---TDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLTHKSPTDTSDV 1162
Query: 384 INDKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNL-- 441
D IP + + TNS S GG D N+
Sbjct: 1163 AKD----IPHIHSRQ-------TNS---SLGG--------------------MDDSNVLT 1188
Query: 442 TSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSD-----NSPARPPNKRIRRVNYVH 496
T++ + RS D E E E S D N + P + +R+N +
Sbjct: 1189 TTKSKKRSLE----------------DNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIA 1232
Query: 497 AIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTW-SEELIDATL 555
AI+ K I + T++ Y EAI+ N++ EK + AY KEI+QL KM+TW + + D
Sbjct: 1233 AIKGVKSIKPVRTTLRYDEAITYNKDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRND 1292
Query: 556 IPKQRIINSMFIFTTKRDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALD 615
I +++INSMFIF KRD + K R VARGD Q +TYD D ++ TVHH ALMT L++ALD
Sbjct: 1293 IDPKKVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALD 1352
Query: 616 HNLTAFQLDISSAYLYADLKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQ 675
++ QLDISSAYLYAD+KEELYIR PPH+ +K+L+L KSLYGLKQSGANW IK
Sbjct: 1353 NDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKS 1412
Query: 676 FLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKV 735
+L+ C + E R W CVF + + +CLFVDDM++ ++ + I+ L K++DTK+
Sbjct: 1413 YLINCCDMQEVRGWSCVFKNSQ---VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKI 1469
Query: 736 VNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPG 795
+N G E D +YDILG+E++Y++ +YMK GM+KSL +KLP L VPL ++ + PG
Sbjct: 1470 INLG---EGDNEIQYDILGLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPG 1526
Query: 796 CPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSA 855
PG YI ++L +D+ +YK+KV +Q+L+GLASYVG+KFRF++LYY+N LAQH L+PS
Sbjct: 1527 QPGHYIDQ-DELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSR 1585
Query: 856 KVLDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEITAISDAAFAGNNDFKSQSGALYLWN 913
+VLD +L Q++WDTRDK+LIW + P +N++ AISDA++ +KSQ G ++L N
Sbjct: 1586 QVLDMTYELIQFMWDTRDKQLIWHKNKPTKPDNKLVAISDASYGNQPYYKSQIGNIFLLN 1645
Query: 914 GKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIK-LKTDSQPA 972
GK I KS+K LTC S+TEAEI+++S + L + LV + LN K IIK L TDS+
Sbjct: 1646 GKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQE-LNKKPIIKGLLTDSRST 1704
Query: 973 MAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
++IIK + +F + G++AMR+RDE + L + YI TK+N AD++TKPL +K FKLL
Sbjct: 1705 ISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLL 1764
Query: 1033 TEDWI 1037
T WI
Sbjct: 1765 TNKWI 1769
>YER160c [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 632 bits (1631), Expect = 0.0
Identities = 402/1050 (38%), Positives = 577/1050 (54%), Gaps = 86/1050 (8%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQQSNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQLRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G ++ P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISDIESTGSG---GMHRLDVPLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLPPIIDGLDTNINLQEETQLPPIID---GLDTNINXXXXXXXXXXX 354
+ TN P+ T E+ II +DT+ +
Sbjct: 1053 SYSDNETNHTNVPISSTGGTNNKTVPQTSEQETEKRIIHRSPSIDTSSSESNSLHHVVPI 1112
Query: 355 XXXXXXXXXXAADSV-PDTTNPN-PSEDDDTINDKLKSIPIFNGNKYKGPRTTTNSFEPS 412
+S+ D P+ P E ++D K +P N ++ TNS S
Sbjct: 1113 KTSDTCPKENTEESIIADLPLPDLPPEPPTELSDSFKELPPINSHQ-------TNS---S 1162
Query: 413 YGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSGGDFDEEQ 471
GG + Y + S+KR N T + +D++++
Sbjct: 1163 LGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT-------- 1198
Query: 472 EQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQN 531
N + P + +R++ + A++ K I + T++ Y EAI+ N++ EK +
Sbjct: 1199 ------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIQ 1252
Query: 532 AYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVARGDQQSLE 590
AY KE+ QL KM TW ++ D I +R+INSMFIF KRD + K R VARGD Q +
Sbjct: 1253 AYHKEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVARGDIQHPD 1312
Query: 591 TYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNARN 650
TYDP ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR PPH+ +
Sbjct: 1313 TYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMND 1372
Query: 651 KVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDM 710
K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +CLFVDDM
Sbjct: 1373 KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTICLFVDDM 1429
Query: 711 LVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQ 770
++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+YMK GM+
Sbjct: 1430 ILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGKYMKLGME 1486
Query: 771 KSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASY 830
SL +K+P L VPL R+ PG PG YI ++L L++ DYK KV +Q+L+GLASY
Sbjct: 1487 NSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-QELELEEDDYKMKVHEMQKLIGLASY 1545
Query: 831 VGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEI 888
VG+KFRF++LYY+N LAQH L+PS +VLD +L Q++W+TRDK+LIW S P N++
Sbjct: 1546 VGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKL 1605
Query: 889 TAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRG 948
ISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS V L
Sbjct: 1606 VVISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNN 1665
Query: 949 IEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVL 1007
+ LV + LN K I K L TDS+ ++II + +F + G++AMR+RDE + L +
Sbjct: 1666 LSHLVQE-LNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHV 1724
Query: 1008 EYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1725 CYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YBL101w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 632 bits (1631), Expect = 0.0
Identities = 402/1083 (37%), Positives = 573/1083 (52%), Gaps = 133/1083 (12%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+LNDCRT L + LP LW+ A+ FS +RN+ V+ S R A +AGL +LPFG
Sbjct: 774 LLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFG 833
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEI- 119
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ ++
Sbjct: 834 QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQDNQSKLD 893
Query: 120 -----------------------VSQDEIEQMIERIENEDAANMENVEFNEEP--NYAGS 154
+ Q+E EQ ++ D +E N +P N S
Sbjct: 894 QFNYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQNTESDHDYQSEIEINSDPLVNDFSS 953
Query: 155 AQPMPYNTDYIADNINENFETITQEMADFGLEYGGDTLSPV---TPSDAGDPFTPSDAGD 211
P D+ + + +++++ + SPV TP T + G
Sbjct: 954 QSMNPLQLDHEPVQKVRALKEVDADISEYNI-----LPSPVRSRTPHIINKEST--EMGG 1006
Query: 212 SFTPSDAGDQFTPAPTDNNRRETTSSPEPIGENRDPISPPDSNQDGMNDNINESPEPYRA 271
+ + + T N++ P SP D D +N E +
Sbjct: 1007 TIESDTTSPRHSSTFTARNQKR-------------PGSPNDMIDLTSQDRVNYELENIKT 1053
Query: 272 NSTASSAQPEEEHHASPTNLDFSPIIDGLETNTNIQEEPLLPPIIDGLDTNINLQEETQL 331
+ +P + + S TN+ + + + PII +I +
Sbjct: 1054 TRLGGTEEPYIQRN-SDTNIKYRTTNSTPSIDDRSPDSDSTTPII-----SIETKAACDN 1107
Query: 332 PPIIDGLDTNINXXXXXXXXXXXXXXXXXXXXXAADSV------PDTTNPNPSEDDDTIN 385
P ID T+ ADS+ PD TN +P++ D
Sbjct: 1108 TPSID---TDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLTNKSPTDTSDVSK 1164
Query: 386 DKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNL--TS 443
D IP + + TNS S GG D N+ T+
Sbjct: 1165 D----IPHIHSRQ-------TNS---SLGG--------------------MDDSNVLTTT 1190
Query: 444 QKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSD-----NSPARPPNKRIRRVNYVHAI 498
+ + RS D E E E S D N + P + +R+N + AI
Sbjct: 1191 KSKKRSLE----------------DNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIAAI 1234
Query: 499 EHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIP 557
+ K I + T++ Y EAI+ N + EK + AY KEI QL +M+TW + + D I
Sbjct: 1235 KGVKSIKPVRTTLRYDEAITYNEDNKEKDRYIEAYHKEINQLLRMNTWDTNKYYDRNDID 1294
Query: 558 KQRIINSMFIFTTKRDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHN 617
+++INSMFIF KRD + K R VARGD Q +TYD D ++ TVHH ALMT L++ALD++
Sbjct: 1295 PKKVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDND 1354
Query: 618 LTAFQLDISSAYLYADLKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQFL 677
QLDISSAYLYAD+KEELYIR PPH+ +K+L+L KSLYGLKQSGANW IK +L
Sbjct: 1355 YYITQLDISSAYLYADIKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKSYL 1414
Query: 678 VEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVN 737
+ C + E R W CVF + + +CLFVDDM++ ++ + I+ L K++DTK++N
Sbjct: 1415 INCCDMQEVRGWSCVFKNSQ---VTICLFVDDMILFSKDLNANEKIITTLKKQYDTKIIN 1471
Query: 738 DGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCP 797
G E D +YDILG+E++Y++ +YMK GM+KSL +KLP L VPL ++ PG P
Sbjct: 1472 LG---ESDNEIQYDILGLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLSAPGQP 1528
Query: 798 GDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKV 857
G YI ++L +D+ +YK+KV +Q+L+GLASYVG+KFRF++LYY+N LAQH L+PS +V
Sbjct: 1529 GHYIDQ-DELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQV 1587
Query: 858 LDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEITAISDAAFAGNNDFKSQSGALYLWNGK 915
LD +L Q++WDTRDK+LIW + P +N++ AISDA++ +KSQ G ++L NGK
Sbjct: 1588 LDMTYELIQFMWDTRDKQLIWHKNKPTKPDNKLVAISDASYGNQPYYKSQIGNIFLLNGK 1647
Query: 916 TIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMA 974
I KS+K LTC S+TEAEI+++S + L + LV + LN K IIK L TDS+ ++
Sbjct: 1648 VIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQE-LNKKPIIKGLLTDSRSTIS 1706
Query: 975 IIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLLTE 1034
IIK + +F + G++AMR+RDE + L + YI TK+N AD++TKPL +K FKLLT
Sbjct: 1707 IIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTN 1766
Query: 1035 DWI 1037
WI
Sbjct: 1767 KWI 1769
>YDR261w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 632 bits (1630), Expect = 0.0
Identities = 405/1085 (37%), Positives = 576/1085 (52%), Gaps = 137/1085 (12%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+LNDCRT L + LP LW+ A+ FS +RN+ V+ S R A +AGL +LPFG
Sbjct: 774 LLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFG 833
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEI- 119
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ ++
Sbjct: 834 QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQDNQSKLD 893
Query: 120 -----------------------VSQDEIEQMIERIENEDAANMENVEFNEEP--NYAGS 154
+ Q+E EQ ++ D +E N +P N S
Sbjct: 894 QFNYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQNTESDHDYQSEIEINSDPLVNDFSS 953
Query: 155 AQPMPYNTDYIADNINENFETITQEMADFGLEYGGDTLSPVTPSDAGDPFTPSDAGDSFT 214
P D + + +++++ + T+ TP T + G +
Sbjct: 954 QSLNPLQLDKEPVQKVRAPKEVDADISEYNIL--PSTIRSRTPHIINKEST--EMGGTIE 1009
Query: 215 PSDAGDQFTPAPTDNNRRETTSSPEPIGENRDPISPPDSNQDGMNDNINESPEPYRANST 274
+ + T N++ P SP D D +N E +
Sbjct: 1010 SDTTSPRHSSTFTARNQKR-------------PGSPNDMIDLTSQDRVNYGLENIKTTRL 1056
Query: 275 ASSAQPEEEHHASPTNLDF-----SPIIDGLETNTNIQEEPLLPPIIDGLDTNINLQEET 329
+ +P + + S TN+ + +P ID +N+ PII +I +
Sbjct: 1057 GGTEEPYIQRN-SDTNIKYRTTNSTPSIDDRSSNSESTT-----PII-----SIETKAVC 1105
Query: 330 QLPPIIDGLDTNINXXXXXXXXXXXXXXXXXXXXXAADSV------PDTTNPNPSEDDDT 383
P ID T+ ADS+ PD TN +P++ D
Sbjct: 1106 DNTPSID---TDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLTNKSPTDTSDV 1162
Query: 384 INDKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNL-- 441
D IP + + TNS S GG D N+
Sbjct: 1163 SKD----IPHIHSRQ-------TNS---SLGG--------------------MDDSNVLT 1188
Query: 442 TSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSD-----NSPARPPNKRIRRVNYVH 496
T++ + RS D E E E S D N + P + +R+N +
Sbjct: 1189 TTKSKKRSLE----------------DNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIA 1232
Query: 497 AIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTW-SEELIDATL 555
AI+ K I + T++ Y EAI+ N++ EK + AY KEI+QL KM+TW + + D
Sbjct: 1233 AIKGVKSIKPVRTTLRYDEAITYNKDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRND 1292
Query: 556 IPKQRIINSMFIFTTKRDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALD 615
I +++INSMFIF KRD + K R VARGD Q +TYD D ++ TVHH ALMT L++ALD
Sbjct: 1293 IDPKKVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALD 1352
Query: 616 HNLTAFQLDISSAYLYADLKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQ 675
++ QLDISSAYLYAD+KEELYIR PPH+ +K+L+L KSLYGLKQSGANW IK
Sbjct: 1353 NDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKS 1412
Query: 676 FLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKV 735
+L+ C + E R W CVF + + +CLFVDDM++ ++ + I+ L K++DTK+
Sbjct: 1413 YLINCCDMQEVRGWSCVFKNSQ---VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKI 1469
Query: 736 VNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPG 795
+N G E D +YDILG+E++Y++ +YMK GM+KSL +KLP L VPL ++ + PG
Sbjct: 1470 INLG---EGDNEIQYDILGLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPG 1526
Query: 796 CPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSA 855
PG YI ++L +D+ +YK+KV +Q+L+GLASYVG+KFRF++LYY+N LAQH L+PS
Sbjct: 1527 QPGHYIDQ-DELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSR 1585
Query: 856 KVLDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEITAISDAAFAGNNDFKSQSGALYLWN 913
+VLD +L Q++W+TRDK+LIW S P N++ ISDA++ +KSQ G +YL N
Sbjct: 1586 QVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLVVISDASYGNQPYYKSQIGNIYLLN 1645
Query: 914 GKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIK-LKTDSQPA 972
GK I KS+K LTC S+TEAEI+++S + L + LV + LN K IIK L TDS+
Sbjct: 1646 GKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQE-LNKKPIIKGLLTDSRST 1704
Query: 973 MAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
++IIK + +F + G++AMR+RDE + L + YI TK N AD++TKPL +K FKLL
Sbjct: 1705 ISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKMNIADVMTKPLPIKTFKLL 1764
Query: 1033 TEDWI 1037
T WI
Sbjct: 1765 TNKWI 1769
>YOR192c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 631 bits (1628), Expect = e-180
Identities = 403/1085 (37%), Positives = 579/1085 (53%), Gaps = 137/1085 (12%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+LNDCRT L + LP LW+ A+ FS +RN+ V+ S R A +AGL +LPFG
Sbjct: 774 LLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFG 833
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEI- 119
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL++ ++
Sbjct: 834 QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQNKQTKLD 893
Query: 120 -----------------------VSQDEIEQMIERIENEDAANMENVEFNEEP--NYAGS 154
+ Q+E EQ ++ D +E N +P N S
Sbjct: 894 QFDYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQNTESDHDYQSEIEINSDPLVNDFSS 953
Query: 155 AQPMPYNTDYIADNINENFETITQEMADFGLEYGGDTLSPVTPSDAGDPFTPSDAGDSFT 214
P D + + +++++ + T+ TP T + G +
Sbjct: 954 QSLNPLQLDKEPVQKVRAPKEVDADISEYNIL--PSTIRSRTPHIINKEST--EMGGTIE 1009
Query: 215 PSDAGDQFTPAPTDNNRRETTSSPEPIGENRDPISPPDSNQDGMNDNINESPEPYRANST 274
+ + T N++ P SP D D +N E +
Sbjct: 1010 SDTTSPRHSSTFTARNQKR-------------PGSPNDMIDLTSQDRVNYGLENIKTTRL 1056
Query: 275 ASSAQPEEEHHASPTNLDF-----SPIIDGLETNTNIQEEPLLPPIIDGLDTNINLQEET 329
+ +P + + S TN+ + +P ID +N+ PII +I +
Sbjct: 1057 GGTEEPYIQRN-SDTNIKYRTTNSTPSIDDRSSNSESTT-----PII-----SIETKAAC 1105
Query: 330 QLPPIIDGLDTNINXXXXXXXXXXXXXXXXXXXXXAADSV------PDTTNPNPSEDDDT 383
P ID T+ ADS+ PD T+ +P++ D
Sbjct: 1106 DNTPSID---TDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLTHQSPTDTSDV 1162
Query: 384 INDKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNL-- 441
D IP + + TNS S GG D N+
Sbjct: 1163 SKD----IPHIHSRQ-------TNS---SLGG--------------------MDDSNVLT 1188
Query: 442 TSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSD-----NSPARPPNKRIRRVNYVH 496
T++ + RS D E E E S D N + P + +R+N +
Sbjct: 1189 TTKSKKRSLE----------------DNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIA 1232
Query: 497 AIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTW-SEELIDATL 555
AI+ K I + T++ Y EAI+ N++ EK + AY KEI+QL KM+TW + + D
Sbjct: 1233 AIKGVKSIKPVRTTLRYDEAITYNKDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRND 1292
Query: 556 IPKQRIINSMFIFTTKRDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALD 615
I +++INSMFIF KRD + K R VARGD Q +TYD D ++ TVHH ALMT L++ALD
Sbjct: 1293 IDPKKVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALD 1352
Query: 616 HNLTAFQLDISSAYLYADLKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQ 675
++ QLDISSAYLYAD+KEELYIR PPH+ +K+L+L KSLYGLKQSGANW IK
Sbjct: 1353 NDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKS 1412
Query: 676 FLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKV 735
+L+ C + E R W CVF + + +CLFVDDM++ ++ + I+ L K++DTK+
Sbjct: 1413 YLINCCDMQEVRGWSCVFKNSQ---VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKI 1469
Query: 736 VNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPG 795
+N G E D +YDILG+E++Y++ +YMK GM+KSL +KLP L VPL ++ + PG
Sbjct: 1470 INLG---EGDNEIQYDILGLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPG 1526
Query: 796 CPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSA 855
PG YI ++L +D+ +YK+KV +Q+L+GLASYVG+KFRF++LYY+N LAQH L+PS
Sbjct: 1527 QPGHYIDQ-DELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSR 1585
Query: 856 KVLDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEITAISDAAFAGNNDFKSQSGALYLWN 913
+VLD +L Q++WDTRDK+LIW + P +N++ AISDA++ +KSQ G ++L N
Sbjct: 1586 QVLDMTYELIQFMWDTRDKQLIWHKNKPTKPDNKLVAISDASYGNQPYYKSQIGNIFLLN 1645
Query: 914 GKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIK-LKTDSQPA 972
GK I KS+K LTC S+TEAEI+++S + L + LV + LN K IIK L TDS+
Sbjct: 1646 GKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQE-LNKKPIIKGLLTDSRST 1704
Query: 973 MAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
++IIK + +F + G++AMR+RDE + L + YI T +N AD++TKPL +K FKLL
Sbjct: 1705 ISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETNKNIADVMTKPLPIKTFKLL 1764
Query: 1033 TEDWI 1037
T WI
Sbjct: 1765 TNKWI 1769
>YGR027w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 631 bits (1628), Expect = e-180
Identities = 405/1057 (38%), Positives = 576/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N +
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSRQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW ++E D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIQQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ +N I KL ++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMVLFSKNLNSNKRIIDKLKMQYDTKIINLG---ESDEEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L L++ DYK KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-QELELEEDDYKMKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++W+TRDK+LIW S P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
N++ ISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 VKPTNKLVVISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + L+ + L+ K I K L TDS+ ++II + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSYLIQE-LDKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YJR029w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 631 bits (1627), Expect = e-180
Identities = 405/1057 (38%), Positives = 575/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N +
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSRQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW ++E D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIQQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ +N I KL ++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLG---ESDEEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L L++ DYK KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-QELELEEDDYKMKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++W+TRDK+LIW S P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
N++ ISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 VKPTNKLVVISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + L+ + L+ K I K L TDS+ ++II + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSYLIQE-LDKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YDR034c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 630 bits (1625), Expect = e-180
Identities = 403/1085 (37%), Positives = 577/1085 (53%), Gaps = 137/1085 (12%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+LNDCRT L + LP LW+ A+ FS +RN+ V+ S R A +AGL +LPFG
Sbjct: 774 LLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFG 833
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEI- 119
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ ++
Sbjct: 834 QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQDKQSKLD 893
Query: 120 -----------------------VSQDEIEQMIERIENEDAANMENVEFNEEP--NYAGS 154
+ ++E EQ ++ D +E N +P N S
Sbjct: 894 QFNYDTLTFDDDLNRLTAHNQSFIEKNETEQSYDQNTESDHDYQSEIEINSDPLVNDFSS 953
Query: 155 AQPMPYNTDYIADNINENFETITQEMADFGLEYGGDTLSPVTPSDAGDPFTPSDAGDSFT 214
P D + + +++++ + T+ TP T + G +
Sbjct: 954 QSINPLQLDKEPVQKVRAPKEVDADISEYNIL--PSTIRSRTPHIINKEST--EMGGTIE 1009
Query: 215 PSDAGDQFTPAPTDNNRRETTSSPEPIGENRDPISPPDSNQDGMNDNINESPEPYRANST 274
+ + T N++ P SP D D +N E +
Sbjct: 1010 SDTTSPRHSSTFTARNQKR-------------PGSPNDMIDLTSQDRVNYGLENIKTTRL 1056
Query: 275 ASSAQPEEEHHASPTNLDF-----SPIIDGLETNTNIQEEPLLPPIIDGLDTNINLQEET 329
+ +P + + S TN+ + +P ID +N+ PII +I +
Sbjct: 1057 GGTEEPYIQRN-SDTNIKYRTTNSTPSIDDRSSNSESTT-----PII-----SIETKAAC 1105
Query: 330 QLPPIIDGLDTNINXXXXXXXXXXXXXXXXXXXXXAADSV------PDTTNPNPSEDDDT 383
P ID T+ ADS+ PD TN +P++ D
Sbjct: 1106 DNTPSID---TDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLTNKSPTDTSDV 1162
Query: 384 INDKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNL-- 441
D IP + + TNS S GG D N+
Sbjct: 1163 SKD----IPHIHSRQ-------TNS---SLGG--------------------MDDSNVLT 1188
Query: 442 TSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSD-----NSPARPPNKRIRRVNYVH 496
T++ + RS D E E E S D N + P + +R+N +
Sbjct: 1189 TTKSKKRSLE----------------DNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIA 1232
Query: 497 AIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTW-SEELIDATL 555
AI+ K I + T++ Y EAI+ N + EK + AY KEI QL +M+TW + + D
Sbjct: 1233 AIKGVKSIKPVRTTLRYDEAITYNEDNKEKDRYIEAYHKEINQLLRMNTWDTNKYYDRND 1292
Query: 556 IPKQRIINSMFIFTTKRDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALD 615
I +++INSMFIF KRD + K R VARGD Q +TYD D ++ TVHH ALMT L++ALD
Sbjct: 1293 IDPKKVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALD 1352
Query: 616 HNLTAFQLDISSAYLYADLKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQ 675
++ QLDISSAYLYAD+KEELYIR PPH+ +K+L+L KSLYGLKQSGANW IK
Sbjct: 1353 NDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKS 1412
Query: 676 FLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKV 735
+L+ C + E R W CVF + + +CLFVDDM++ ++ + I+ L K++DTK+
Sbjct: 1413 YLINCCDMQEVRGWSCVFKNSQ---VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKI 1469
Query: 736 VNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPG 795
+N G E D +YDILG+E++Y++ +YMK GM+KSL +KLP L VPL ++ + PG
Sbjct: 1470 INLG---EGDNEIQYDILGLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPG 1526
Query: 796 CPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSA 855
PG YI ++L +D+ +YK+KV +Q+L+GLASYVG+KFRF++LYY+N LAQH L+PS
Sbjct: 1527 QPGHYIDQ-DELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSR 1585
Query: 856 KVLDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEITAISDAAFAGNNDFKSQSGALYLWN 913
+VLD +L Q++WDTRDK+LIW + P +N++ AISDA++ +KSQ G ++L N
Sbjct: 1586 QVLDMTYELIQFMWDTRDKQLIWHKNKPTKPDNKLVAISDASYGNQPYYKSQIGNIFLLN 1645
Query: 914 GKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIK-LKTDSQPA 972
GK I KS+K LTC S+TEAEI+++S + L + LV + LN K IIK L TDS+
Sbjct: 1646 GKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQE-LNKKPIIKGLLTDSRST 1704
Query: 973 MAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
++IIK + +F + G++AMR+RDE + L + YI TK+N AD++TKPL +K FKLL
Sbjct: 1705 ISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLL 1764
Query: 1033 TEDWI 1037
T WI
Sbjct: 1765 TNKWI 1769
>YPR158c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 630 bits (1624), Expect = e-180
Identities = 403/1054 (38%), Positives = 580/1054 (54%), Gaps = 94/1054 (8%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSASQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ DS S+ + P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTE--DSKPISEINLR-APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E H + + S
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH-ESSHASKSKDFRHSDSY 1054
Query: 298 DGLETN-TNIQ-------EEPLLPPIIDGLDTNINLQEETQLPPIIDGLDTNINXXXXXX 349
ETN TN+ +P I D +T + + P ID N
Sbjct: 1055 SNNETNHTNVPISSTGGTNNKTVPQISDQ-ETEKRIIHRS---PSIDASPPENNSSHNIV 1110
Query: 350 XXXXXXXXXXXXXXXAADSVPDTTNPNPSEDDDT-INDKLKSIPIFNGNKYKGPRTTTNS 408
+ + D P+P + T ++D K +P N + TNS
Sbjct: 1111 PIKTPTTVSEQNTEESI--IADLPLPDPPPEPPTELSDSFKELPPINSRQ-------TNS 1161
Query: 409 FEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSGGDF 467
S GG + Y + S+KR N T + +D++++
Sbjct: 1162 ---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT---- 1198
Query: 468 DEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKL 527
N + P + +R++ + A++ K I + T++ Y EAI+ N++ EK
Sbjct: 1199 ----------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKE 1248
Query: 528 AFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVARGDQ 586
+ AY KE+ QL KM TW ++ D I +R+INSMFIF KRD + K R VARGD
Sbjct: 1249 KYIEAYHKEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVARGDI 1308
Query: 587 QSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHM 646
Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR PPH+
Sbjct: 1309 QHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHL 1368
Query: 647 NARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLF 706
+K+++L KS YGLKQSGANW IK +L+++CG+ E R W CVF + + +CLF
Sbjct: 1369 GMNDKLIRLKKSHYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTICLF 1425
Query: 707 VDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMK 766
VDDM++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+YMK
Sbjct: 1426 VDDMILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGKYMK 1482
Query: 767 FGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVG 826
GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+L+G
Sbjct: 1483 LGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQKLIG 1541
Query: 827 LASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP--K 884
LASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW + P
Sbjct: 1542 LASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEP 1601
Query: 885 NNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVT 944
+N++ AISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS V
Sbjct: 1602 DNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVP 1661
Query: 945 YLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNEL 1003
L + LV + LN K I K L TDS+ ++II + +F + G++AMR+RDE +
Sbjct: 1662 LLNNLSHLVQE-LNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGN 1720
Query: 1004 GLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1721 HLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YMR045c [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 629 bits (1623), Expect = e-180
Identities = 401/1050 (38%), Positives = 575/1050 (54%), Gaps = 86/1050 (8%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQQSNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQLRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G ++ P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISDIESTGSG---GMHRLDVPLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLPPIIDGLDTNINLQEETQLPPIID---GLDTNINXXXXXXXXXXX 354
+ TN P+ T E+ II +DT+ +
Sbjct: 1053 SYSDNETNHTNVPISSTGGTNNKTVPQTSEQETEKRIIHRSPSIDTSSSESNSLHHVVPI 1112
Query: 355 XXXXXXXXXXAADSV-PDTTNPN-PSEDDDTINDKLKSIPIFNGNKYKGPRTTTNSFEPS 412
+S+ D P+ P E ++D K +P N + TNS S
Sbjct: 1113 KTSDTCPKENTEESIIADLPLPDLPPEPPTELSDSFKELPPINSRQ-------TNS---S 1162
Query: 413 YGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSGGDFDEEQ 471
GG + Y + S+KR N T + +D++++
Sbjct: 1163 LGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT-------- 1198
Query: 472 EQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQN 531
N + P + +R++ + A++ K I + T++ Y EAI+ N++ EK +
Sbjct: 1199 ------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIE 1252
Query: 532 AYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVARGDQQSLE 590
AY KE+ QL KM TW +++ D I +R+INSMFIF KRD + K R VARGD Q +
Sbjct: 1253 AYHKEVNQLLKMKTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVARGDIQHPD 1312
Query: 591 TYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNARN 650
TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR PPH+ +
Sbjct: 1313 TYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMND 1372
Query: 651 KVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDM 710
K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF E ++ +CLFVDDM
Sbjct: 1373 KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF---ENSQVTICLFVDDM 1429
Query: 711 LVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQ 770
++ +N I KL ++DTK++N G E D +YDILG+E++Y++G+YMK GM+
Sbjct: 1430 VLFSKNLNSNKRIIDKLKMQYDTKIINLG---ESDEEIQYDILGLEIKYQRGKYMKLGME 1486
Query: 771 KSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASY 830
SL +K+P L VPL R+ PG PG YI ++L L++ DYK KV +Q+L+GLASY
Sbjct: 1487 NSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-QELELEEDDYKMKVHEMQKLIGLASY 1545
Query: 831 VGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEI 888
VG+KFRF++LYY+N LAQH L+PS +VLD +L Q++W+TRDK+LIW S P N++
Sbjct: 1546 VGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKL 1605
Query: 889 TAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRG 948
ISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS V L
Sbjct: 1606 VVISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNN 1665
Query: 949 IEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVL 1007
+ L+ + L+ K I K L TDS+ ++II + +F + G++AMR+RDE + L +
Sbjct: 1666 LSYLIQE-LDKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHV 1724
Query: 1008 EYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1725 CYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YOR142w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 629 bits (1622), Expect = e-180
Identities = 403/1057 (38%), Positives = 579/1057 (54%), Gaps = 100/1057 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N +
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSRQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW +++ D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ ++ I+KL ++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMILFSKDLNSNKRIIAKLKMQYDTKIINLG---ESDDEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL + R+ PG PG YI+ ++L L++ DYK KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPNGRKLGAPGQPGLYINQ-QELELEEDDYKMKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP 883
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++W+TRDK+LIW S P
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKP 1598
Query: 884 --KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISN 941
N++ ISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS
Sbjct: 1599 VKPTNKLVVISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISE 1658
Query: 942 CVTYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDEC 1000
V L + L+ + L+ K I K L TDS+ ++II + +F + G++AMR+RDE
Sbjct: 1659 SVPLLNNLSYLIQE-LDKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEV 1717
Query: 1001 NELGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
+ L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1718 SGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YLR035c-a [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1155
Score = 629 bits (1621), Expect = e-179
Identities = 400/1050 (38%), Positives = 575/1050 (54%), Gaps = 86/1050 (8%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 178 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 237
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 238 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 296
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 297 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQ 341
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 342 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 398
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G ++ P A + S+ E HAS + DF
Sbjct: 399 PSKKRSSTPQISDIESTGSG---GMHRLDVPLLAPMSQSNTH--ESSHASKSK-DFRHSD 452
Query: 298 DGLETNTNIQEEPLLPPIIDGLDTNINLQEETQLPPIID---GLDTNINXXXXXXXXXXX 354
+ TN P+ T E+ II +DT+ +
Sbjct: 453 SYSDNETNHTNVPISSTGGTNNKTVPQTSEQETEKRIIHRSPSIDTSSSESNSLHHVVPI 512
Query: 355 XXXXXXXXXXAADSV-PDTTNPN-PSEDDDTINDKLKSIPIFNGNKYKGPRTTTNSFEPS 412
+S+ D P+ P E ++D K +P N ++ TNS S
Sbjct: 513 KTSDTCPKENTEESIIADLPLPDLPPEPPTELSDSFKELPPINSHQ-------TNS---S 562
Query: 413 YGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSGGDFDEEQ 471
GG + Y + S+KR N T + +D++++
Sbjct: 563 LGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT-------- 598
Query: 472 EQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQN 531
N + P + +R++ + A++ K I + T++ Y EAI+ N++ EK +
Sbjct: 599 ------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIQ 652
Query: 532 AYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVARGDQQSLE 590
AY KE+ QL KM TW ++ D I +R+INSMFIF KR + K R VARGD Q +
Sbjct: 653 AYHKEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNRKRGGTHKARFVARGDIQHPD 712
Query: 591 TYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNARN 650
TYDP ++ TVHH ALMT L++A D+N QLDISSAYLYAD+KEELYIR PPH+ +
Sbjct: 713 TYDPGMQSNTVHHYALMTSLSLASDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMND 772
Query: 651 KVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDM 710
K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +CLFVDDM
Sbjct: 773 KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTICLFVDDM 829
Query: 711 LVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQ 770
++ ++ + I+ L K++DTK++N G E D +YDILG+E++Y++G+YMK GM+
Sbjct: 830 ILFSKDLNANKKIITTLKKQYDTKIINLG---ESDNEIQYDILGLEIKYQRGKYMKLGME 886
Query: 771 KSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASY 830
SL +K+P L VPL R+ PG PG YI ++L L++ DYK KV +Q+L+GLASY
Sbjct: 887 NSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-QELELEEDDYKMKVHEMQKLIGLASY 945
Query: 831 VGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEI 888
VG+KFRF++LYY+N LAQH L+PS +VLD +L Q++W+TRDK+LIW S P N++
Sbjct: 946 VGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKL 1005
Query: 889 TAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRG 948
ISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS V L
Sbjct: 1006 VVISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNN 1065
Query: 949 IEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVL 1007
+ LV + LN K I K L TDS+ ++II + +F + G++AMR+RDE + L +
Sbjct: 1066 LSHLVQE-LNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHV 1124
Query: 1008 EYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1125 CYIETKKNIADVMTKPLPIKTFKLLTNKWI 1154
>YGR161c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 629 bits (1621), Expect = e-179
Identities = 399/1050 (38%), Positives = 579/1050 (55%), Gaps = 86/1050 (8%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E +AS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSYASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLPPIIDGLDTNINLQEETQLPPIID---GLDTNINXXXXXXXXXXX 354
+ TN P+ T E+ II +DT+ +
Sbjct: 1053 SYSDNETNHTNVPISSTGGTNNKTVPQTSEQETEKRIIHRSPSIDTSSSESNSLHHVVPI 1112
Query: 355 XXXXXXXXXXAADSV-PDTTNPN-PSEDDDTINDKLKSIPIFNGNKYKGPRTTTNSFEPS 412
+S+ D P+ P E ++D K +P N + TNS S
Sbjct: 1113 KTSDTCPKENTEESIIADLPLPDLPPEPPTELSDSFKELPPINSRQ-------TNS---S 1162
Query: 413 YGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSGGDFDEEQ 471
GG + Y + S+KR N T + +D++++
Sbjct: 1163 LGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT-------- 1198
Query: 472 EQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQN 531
N + P + +R++ + A++ K I + T++ Y EAI+ N++ EK +
Sbjct: 1199 ------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIE 1252
Query: 532 AYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVARGDQQSLE 590
AY KE+ QL KM+TW +++ D I +R+INSMFIF KRD + K R VARGD Q +
Sbjct: 1253 AYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVARGDIQHPD 1312
Query: 591 TYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNARN 650
TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR PPH+ +
Sbjct: 1313 TYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMND 1372
Query: 651 KVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDM 710
K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +CLFVDDM
Sbjct: 1373 KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTICLFVDDM 1429
Query: 711 LVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQ 770
++ ++ I+KL ++DTK++N G E D +YDILG+E++Y++G+YMK GM+
Sbjct: 1430 ILFSKDLNSNKRIIAKLKMQYDTKIINLG---ESDDEIQYDILGLEIKYQRGKYMKLGME 1486
Query: 771 KSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASY 830
SL +K+P L VPL + R+ PG PG YI+ ++L L++ DYK KV +Q+L+GLASY
Sbjct: 1487 NSLTEKIPKLNVPLNPNGRKLGAPGQPGLYINQ-QELELEEDDYKMKVHEMQKLIGLASY 1545
Query: 831 VGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEI 888
VG+KFRF++LYY+N LAQH L+PS +VLD +L Q++W+TRDK+LIW S P N++
Sbjct: 1546 VGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKL 1605
Query: 889 TAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRG 948
ISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS V L
Sbjct: 1606 VVISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNN 1665
Query: 949 IEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVL 1007
+ L+ + L+ K I K L TDS+ ++II + +F + G++AMR+RDE + L +
Sbjct: 1666 LSYLIQE-LDKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHV 1724
Query: 1008 EYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1725 CYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YBL005w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 628 bits (1619), Expect = e-179
Identities = 399/1050 (38%), Positives = 574/1050 (54%), Gaps = 86/1050 (8%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQQSNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELYPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G ++ P A + S+ E +AS + DF
Sbjct: 999 PSKKRSSTPQISDIESTDSG---GMHRLDVPLLAPMSQSNTH--ESSYASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLPPIIDGLDTNINLQEETQLPPIID---GLDTNINXXXXXXXXXXX 354
+ TN P+ T E+ II +DT+ +
Sbjct: 1053 SYSDNETNHTNVPISSTGGTNNKTVPQTSEQETEKRIIHRSPSIDTSSSESNSLHHVVPI 1112
Query: 355 XXXXXXXXXXAADSV-PDTTNPN-PSEDDDTINDKLKSIPIFNGNKYKGPRTTTNSFEPS 412
+S+ D P+ P E ++D K +P N + TNS S
Sbjct: 1113 KTSDTCPKENTEESIIADLPLPDLPPEPPTELSDSFKELPPINSRQ-------TNS---S 1162
Query: 413 YGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSGGDFDEEQ 471
GG + Y + S+KR N T + +D++++
Sbjct: 1163 LGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT-------- 1198
Query: 472 EQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQN 531
N + P + +R++ + A++ K I + T++ Y EAI+ N++ EK +
Sbjct: 1199 ------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIE 1252
Query: 532 AYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVARGDQQSLE 590
AY KE+ QL KM TW +++ D I +R+INSMFIF KRD + K R VARGD Q +
Sbjct: 1253 AYHKEVNQLLKMKTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVARGDIQHPD 1312
Query: 591 TYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNARN 650
TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR PPH+ +
Sbjct: 1313 TYDSGMQSNTVHHYALMTSLSLALDNNYHITQLDISSAYLYADIKEELYIRPPPHLGMND 1372
Query: 651 KVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDM 710
K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +CLFVDDM
Sbjct: 1373 KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTICLFVDDM 1429
Query: 711 LVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQ 770
++ +N I KL ++DTK++N G E D +YDILG+E++Y++G+YMK GM+
Sbjct: 1430 VLFSKNLNSNKRIIDKLKMQYDTKIINLG---ESDEEIQYDILGLEIKYQRGKYMKLGME 1486
Query: 771 KSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASY 830
SL +K+P L VPL R+ PG PG YI ++L L++ DYK KV +Q+L+GLASY
Sbjct: 1487 NSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-QELELEEDDYKMKVHEMQKLIGLASY 1545
Query: 831 VGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP--KNNEI 888
VG+KFRF++LYY+N LAQH L+PS +VLD +L Q++W+TRDK+LIW S P N++
Sbjct: 1546 VGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKL 1605
Query: 889 TAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRG 948
ISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS V L
Sbjct: 1606 VVISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNN 1665
Query: 949 IEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVL 1007
+ L+ + L+ K I K L TDS+ ++II + +F + G++AMR+RDE + L +
Sbjct: 1666 LSYLIQE-LDKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHV 1724
Query: 1008 EYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1725 CYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YNL284c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 625 bits (1612), Expect = e-178
Identities = 400/1055 (37%), Positives = 576/1055 (53%), Gaps = 96/1055 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N ++
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISKSNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G ++ P A + + E H + + S
Sbjct: 999 PSKKRSSTPQISDIESTGSG---GMHRLDVPLLAPMSQYNTH-ESSHTSKSKDFRHSDSY 1054
Query: 298 DGLETN-TNIQEEPLLPPIIDGLDTNINL-----QEETQLPPI--IDGLDTNINXXXXXX 349
ETN TN+ PI TN ++ET+ I +DT+ +
Sbjct: 1055 SDNETNHTNV-------PISSTGGTNNKTVPQTSEQETEKRIIHRSPSIDTSSSESNSLH 1107
Query: 350 XXXXXXXXXXXXXXXAADSV-PDTTNPN-PSEDDDTINDKLKSIPIFNGNKYKGPRTTTN 407
+S+ D P+ P E ++D K +P N + TN
Sbjct: 1108 HVVPIKTSDTCPKENTEESIIADLPLPDLPPEPPTKLSDSFKELPPINSRQ-------TN 1160
Query: 408 SFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSGGD 466
S S GG + Y + S+KR N T + +D++++
Sbjct: 1161 S---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT--- 1198
Query: 467 FDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEK 526
N + P + +R++ + A++ K I + T++ Y EAI+ N++ EK
Sbjct: 1199 -----------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEK 1247
Query: 527 LAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVARGD 585
+ AY KE+ QL KM TW ++ D I +R+INSMFIF KRD + K R VARGD
Sbjct: 1248 EKYIEAYHKEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVARGD 1307
Query: 586 QQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPH 645
Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR PPH
Sbjct: 1308 IQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPH 1367
Query: 646 MNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCL 705
+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +CL
Sbjct: 1368 LGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIQQCGMEEVRGWSCVFKNSQ---VTICL 1424
Query: 706 FVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYM 765
FVDDM++ +N I KL ++DTK++N G E D +YDILG+E++Y++G+YM
Sbjct: 1425 FVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLG---ESDEEIQYDILGLEIKYQRGKYM 1481
Query: 766 KFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLV 825
K GM+ SL +K+P L VPL R+ PG PG YI ++L L++ DYK KV +Q+L+
Sbjct: 1482 KLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-QELELEEDDYKMKVHEMQKLI 1540
Query: 826 GLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP-- 883
GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++W+TRDK+LIW S P
Sbjct: 1541 GLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVK 1600
Query: 884 KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCV 943
N++ ISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS V
Sbjct: 1601 PTNKLVVISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESV 1660
Query: 944 TYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNE 1002
L + L+ + L+ K I K L TDS+ ++II + +F + G++AMR+RDE +
Sbjct: 1661 PLLNNLSYLIQE-LDKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSG 1719
Query: 1003 LGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1720 NHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWI 1754
>YBR012w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1756
Score = 624 bits (1608), Expect = e-178
Identities = 396/1055 (37%), Positives = 576/1055 (54%), Gaps = 95/1055 (9%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKDSRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I + + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYQSFIASNEIQQSNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELYPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G ++ P A + S+ E +AS + DF
Sbjct: 999 PSKKRSSTPQISDIESTDSG---GMHRLDVPLLAPMSQSNTH--ESSYASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGLDTNINXXXXX 348
+ TN P+ P +T + I+ ++N
Sbjct: 1053 SYSDNETNHTNVPISSTGGTNNKTVPQTSEQETEKRIIHRFTSDRILPSSESNSLHHVVP 1112
Query: 349 XXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTTTN 407
AD +PD P+E ++D K +P N + TN
Sbjct: 1113 IKTSDTCFKENTEESIIADLPLPDLPPEPPTE----LSDSFKELPPINSRQ-------TN 1161
Query: 408 SFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSGGD 466
S S GG + Y + S+KR N T + +D++++
Sbjct: 1162 S---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT--- 1199
Query: 467 FDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEK 526
N + P + +R++ + A++ K I + T++ Y EAI+ N++ EK
Sbjct: 1200 -----------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEK 1248
Query: 527 LAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVARGD 585
+ AY KE+ QL KM TW +++ D I +R+INSMFIF KRD + K R VARGD
Sbjct: 1249 EKYIEAYHKEVNQLLKMKTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVARGD 1308
Query: 586 QQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPH 645
Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR PPH
Sbjct: 1309 IQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPH 1368
Query: 646 MNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCL 705
+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +CL
Sbjct: 1369 LGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQ---VTICL 1425
Query: 706 FVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYM 765
FVDDM++ ++ I+KL ++DTK++N G E D ++DILG+E++Y++G+YM
Sbjct: 1426 FVDDMILFSKDLNSNKRIIAKLKMQYDTKIINLG---ESDDEIQHDILGLEIKYQRGKYM 1482
Query: 766 KFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLV 825
K GM+ SL +K+P L VPL + R+ PG PG YI+ ++L L++ DYK KV +Q+L+
Sbjct: 1483 KLGMENSLTEKIPKLNVPLNPNGRKLGAPGQPGLYINQ-QELELEEDDYKMKVHEMQKLI 1541
Query: 826 GLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGP-- 883
GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++W+TRDK+LIW S P
Sbjct: 1542 GLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVK 1601
Query: 884 KNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCV 943
N++ ISDA++ +KSQ G +YL NGK I KS+K LTC S+TEAEI++IS V
Sbjct: 1602 PTNKLVVISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESV 1661
Query: 944 TYLRGIEILVDKLLNTKSIIK-LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNE 1002
L + L+ + L+ K I K L TDS+ ++II + +F + G++AMR+RDE +
Sbjct: 1662 PLLNNLSYLIQE-LDKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSG 1720
Query: 1003 LGLVLEYIPTKENTADILTKPLSMKLFKLLTEDWI 1037
L + YI TK+N AD++TKPL +K FKLLT WI
Sbjct: 1721 NHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWI 1755
>YDR261c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1604
Score = 516 bits (1329), Expect = e-146
Identities = 337/905 (37%), Positives = 480/905 (52%), Gaps = 99/905 (10%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFKDVLPFG 60
+L+DCRT LQ + LP LW+ AI FS VRN+ + + S R A +AGL +LPFG
Sbjct: 778 LLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFG 837
Query: 61 QPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGEIV 120
QPVI + H+P SK+ RGI GYALHPS SYGYIIY+P K +DT NYVIL+ +
Sbjct: 838 QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRL- 896
Query: 121 SQDEIEQMIERIENEDAANMENVEFNEEPNYAGSAQPMPYNTDYIADNINENFETITQEM 180
D N + + F+E+ N ++ ++ I ++ + N E+
Sbjct: 897 ---------------DQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQ 941
Query: 181 ADFGL--EYGGDTLSP-VTPSDAGDPFTPSDAGDSFTPSDAGDQFTPAPTDNNRRETTSS 237
+D L E + LS V+P+D+ P T ++ + ++ P D N E+
Sbjct: 942 SDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIR---APREVDPNISESNIL 998
Query: 238 PEPIGENRDPISPPDSNQDGMNDNINESPEPYRANSTASSAQPEEEHHASPTNLDFSPII 297
P + IS +S G +N P A + S+ E HAS + DF
Sbjct: 999 PSKKRSSTPQISNIESTGSGGMHKLNV---PLLAPMSQSNTH--ESSHASKSK-DFRHSD 1052
Query: 298 DGLETNTNIQEEPLLP---------PIIDGLDTNINLQEETQLPPIIDGL--DTNINXXX 346
E TN P+ P I +T + + P ID + N +
Sbjct: 1053 SYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRS---PSIDASPPENNSSHNI 1109
Query: 347 XXXXXXXXXXXXXXXXXXAAD-SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTT 405
AD +PD +P+E D K +P N +
Sbjct: 1110 VPIKTPTTVSEQNTEESIIADLPLPDLPPESPTE----FPDPFKELPPINSRQ------- 1158
Query: 406 TNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFNLTSQKRPRSSN-TYRESDQDSYDSG 464
TNS S GG + Y + S+KR N T + +D++++
Sbjct: 1159 TNS---SLGGIGDSNAYT----------------TINSKKRSLEDNETEIKVSRDTWNT- 1198
Query: 465 GDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNEN 524
N + P + +R++ + A++ K I + T++ Y EAI+ N++
Sbjct: 1199 -------------KNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIK 1245
Query: 525 EKLAFQNAYKKEIAQLTKMHTW-SEELIDATLIPKQRIINSMFIFTTKRDNSKKCRLVAR 583
EK + AY KE+ QL KM TW ++E D I +R+INSMFIF KRD + K R VAR
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVAR 1305
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAP 643
GD Q +TYD ++ TVHH ALMT L++ALD+N QLDISSAYLYAD+KEELYIR P
Sbjct: 1306 GDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPP 1365
Query: 644 PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVV 703
PH+ +K+++L KSLYGLKQSGANW IK +L+++CG+ E R W CVF + + +
Sbjct: 1366 PHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIQQCGMEEVRGWSCVFKNSQ---VTI 1422
Query: 704 CLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE 763
CLFVDDM++ +N I KL ++DTK++N G E D +YDILG+E++Y++G+
Sbjct: 1423 CLFVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLG---ESDEEIQYDILGLEIKYQRGK 1479
Query: 764 YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQR 823
YMK GM+ SL +K+P L VPL R+ PG PG YI ++L +D+ +YK+KV +Q+
Sbjct: 1480 YMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQ-DELEIDEDEYKEKVHEMQK 1538
Query: 824 LVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIW---KY 880
L+GLASYVG+KFRF++LYY+N LAQH L+PS +VLD +L Q++WDTRDK+LIW K
Sbjct: 1539 LIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKHKT 1598
Query: 881 SGPKN 885
S KN
Sbjct: 1599 SSDKN 1603
>YJL113w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1803
Score = 217 bits (553), Expect = 7e-56
Identities = 165/525 (31%), Positives = 277/525 (52%), Gaps = 16/525 (3%)
Query: 510 SINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEEL-IDATLIPKQRIINSMFIF 568
+I Y+EAIS+N + EK ++ AY KE+ L M + ++ + IP I+ + IF
Sbjct: 1270 AIYYNEAISKNPDLKEKHEYKQAYHKELQNLKDMKVFDVDVKYSRSEIPDNLIVPTNTIF 1329
Query: 569 TTKRDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSA 628
T KR+ K R+V RGD QS +TY +++H + L +A + N+ LDI+ A
Sbjct: 1330 TKKRNGIYKARIVCRGDTQSPDTYSVIT-TESLNHNHIKIFLMIANNRNMFMKTLDINHA 1388
Query: 629 YLYADLKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRF 688
+LYA L+EE+YI PH + R V+KLNK+LYGLKQS W ++Q+L GL ++ +
Sbjct: 1389 FLYAKLEEEIYI---PHPHDRRCVVKLNKALYGLKQSPKEWNDHLRQYL-NGIGLKDNSY 1444
Query: 689 WKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVN 748
++ ++ L++ ++VDD ++ N++ + EFI+KL F+ K+ D V
Sbjct: 1445 TPGLYQTEDK-NLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGT----LIDDVL 1499
Query: 749 EYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGED-L 807
+ DILG++L Y K KS +++ R+ +P I +D L
Sbjct: 1500 DTDILGMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVL 1559
Query: 808 TLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQY 867
+ +++++ V LQ+L+G +YV HK R++I + V +A+ YP +V ++ QY
Sbjct: 1560 QMSEEEFRQGVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKIIQY 1619
Query: 868 LWDTRDKKLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIA-AKSSKIKL 926
L +D + + K+ ++ AI+DA+ D +S+ G + LW G I S+K
Sbjct: 1620 LVRYKDIGIHYDRDCNKDKKVIAITDASVGSEYDAQSRIGVI-LWYGMNIFNVYSNKSTN 1678
Query: 927 TCVSSTEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFL 985
CVSSTEAE+++I +++ + +L + I + TDS+PA+ + R +
Sbjct: 1679 RCVSSTEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQ-QPK 1737
Query: 986 KKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFK 1030
+K T + I+++ E + L I K N AD+LTKP+S FK
Sbjct: 1738 EKFTWIKTEIIKEKIKEKSIKLLKITGKGNIADLLTKPVSASDFK 1782
Score = 62.8 bits (151), Expect = 3e-09
Identities = 46/165 (27%), Positives = 73/165 (43%), Gaps = 18/165 (10%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFK--DVLP 58
++ D T L+ +NL K W +A+ + +RN ++ TG P S ++ + LP
Sbjct: 738 IITDATTLLRQSNLRVKFWEYAVTSATNIRNYLEHKSTGKLPLKAISRQPVTVRLMSFLP 797
Query: 59 FGQPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVILKHPPGE 118
FG+ I H+ KL G+ L SYGY ++P +NKI+ + NY I +
Sbjct: 798 FGEKGIIWNHN-HKKLKPSGLPSIILCKDPNSYGYKFFIPSKNKIVTSDNYTIPNYTMDG 856
Query: 119 IV--------------SQDEIEQMIERIENEDAANMENVEFNEEP 149
V D+ E IE + N A +EN E + +P
Sbjct: 857 RVRNTQNINKSHQFSSDNDDEEDQIETVTNLCEA-LENYEDDNKP 900
>YHL009w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1802
Score = 217 bits (553), Expect = 7e-56
Identities = 165/525 (31%), Positives = 277/525 (52%), Gaps = 16/525 (3%)
Query: 510 SINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEEL-IDATLIPKQRIINSMFIF 568
+I Y+EAIS+N + EK ++ AY KE+ L M + ++ + IP I+ + IF
Sbjct: 1269 AIYYNEAISKNPDLKEKHEYKQAYHKELQNLKDMKVFDVDVKYSRSEIPDNLIVPTNTIF 1328
Query: 569 TTKRDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSA 628
T KR+ K R+V RGD QS +TY +++H + L +A + N+ LDI+ A
Sbjct: 1329 TKKRNGIYKARIVCRGDTQSPDTYSVIT-TESLNHNHIKIFLMIANNRNMFMKTLDINHA 1387
Query: 629 YLYADLKEELYIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRF 688
+LYA L+EE+YI PH + R V+KLNK+LYGLKQS W ++Q+L GL ++ +
Sbjct: 1388 FLYAKLEEEIYI---PHPHDRRCVVKLNKALYGLKQSPKEWNDHLRQYL-NGIGLKDNSY 1443
Query: 689 WKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVN 748
++ ++ L++ ++VDD ++ N++ + EFI+KL F+ K+ D V
Sbjct: 1444 TPGLYQTEDK-NLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGT----LIDDVL 1498
Query: 749 EYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGED-L 807
+ DILG++L Y K KS +++ R+ +P I +D L
Sbjct: 1499 DTDILGMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVL 1558
Query: 808 TLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQY 867
+ +++++ V LQ+L+G +YV HK R++I + V +A+ YP +V ++ QY
Sbjct: 1559 QMSEEEFRQGVLKLQQLLGELNYVRHKCRYDINFAVKKVARLVNYPHERVFYMIYKIIQY 1618
Query: 868 LWDTRDKKLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIA-AKSSKIKL 926
L +D + + K+ ++ AI+DA+ D +S+ G + LW G I S+K
Sbjct: 1619 LVRYKDIGIHYDRDCNKDKKVIAITDASVGSEYDAQSRIGVI-LWYGMNIFNVYSNKSTN 1677
Query: 927 TCVSSTEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFL 985
CVSSTEAE+++I +++ + +L + I + TDS+PA+ + R +
Sbjct: 1678 RCVSSTEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQ-QPK 1736
Query: 986 KKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFK 1030
+K T + I+++ E + L I K N AD+LTKP+S FK
Sbjct: 1737 EKFTWIKTEIIKEKIKEKSIKLLKITGKGNIADLLTKPVSASDFK 1781
Score = 61.6 bits (148), Expect = 6e-09
Identities = 35/113 (30%), Positives = 56/113 (48%), Gaps = 3/113 (2%)
Query: 1 MLNDCRTHLQHANLPPKLWYHAIVFSNTVRNTFVNRHTGTSPRNKASMAGLSFK--DVLP 58
++ D T L+ +NL K W +A+ + +RN ++ TG P S ++ + LP
Sbjct: 737 IVTDATTLLRQSNLRVKFWEYAVTSATNIRNCLEHKSTGKLPLKAISRQPVTVRLMSFLP 796
Query: 59 FGQPVIAHIHDPQSKLDSRGILGYALHPSTESYGYIIYVPEENKIIDTRNYVI 111
FG+ I H+ KL G+ L SYGY ++P +NKI+ + NY I
Sbjct: 797 FGEKGIIWNHN-HKKLKPSGLPSIILCKDPNSYGYKFFIPSKNKIVTSDNYTI 848
>At3g29775 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1348
Score = 151 bits (381), Expect = 6e-36
Identities = 149/524 (28%), Positives = 244/524 (46%), Gaps = 58/524 (11%)
Query: 532 AYKKEIAQLTKMHTWSEELIDATLIPKQR-IINSMFIFTTKRDNS-----KKCRLVARGD 585
A ++E+ + K TW + PK + +I+ +IF K D S +K RLVARG
Sbjct: 856 AMREELRMIEKNKTW-----EVVARPKDKNVISVKWIFRLKTDASGEAIKRKARLVARGF 910
Query: 586 QQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYI 640
Q LET+ P + T+ T++A+A FQ+D+ SA+L DL+EE+YI
Sbjct: 911 TQEYGVDYLETFAPVSRYDTIR-----TIMAIAAQQGWKLFQMDVKSAFLNGDLEEEVYI 965
Query: 641 RAPP---HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEEC--GLIEDRFWKCVFTA 695
PP KVLKL+K+LYGLKQ+ W I + ++ I D + T+
Sbjct: 966 EQPPGFIEEKEEGKVLKLHKALYGLKQAPRAWYGRIDGYFIKNGFERSINDAAFYVKKTS 1025
Query: 696 KEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYD--IL 753
KE LVV L+VDD++V G N + I F ++ F+ + + ++ VN+ D I
Sbjct: 1026 KE--ILVVSLYVDDIIVTGSNVKEIERFKEEMKNEFEMTDLGELSYFLGMEVNQDDEGIF 1083
Query: 754 GVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQD 813
+ Y K KFGMQ + + PL H + +V ED+T+
Sbjct: 1084 LSQENYAKKLLKKFGMQ-----ECKSVSTPLTPHGKIEEV------LSEKLEDVTM---- 1128
Query: 814 YKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRD 873
Y+ + + L R +I+Y + L+++ P + L A ++ +Y+ T
Sbjct: 1129 YRSMIGGMLYLCA--------SRPDIMYASSYLSRYMRSPLKQHLQEAKRVLRYVKGTLT 1180
Query: 874 KKLIWKYSGPKNNEITAISDAAFAGN-NDFKSQSGALYLWNGKTIAAKSSKIKLTCVSST 932
+ +K + E+ SD+ +AG+ D KS SG ++ SSK K S+
Sbjct: 1181 YGIHFK--RVEKPELVGFSDSDWAGSVEDKKSTSGYVFTIGSGAFCWNSSKQKTVAQSTA 1238
Query: 933 EAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGS 991
EAE ++ + ++ LV+++ + I++ D++ A+AI K KH
Sbjct: 1239 EAEYIAVCSAANQAIWLQRLVNEIGFKAEKGIRIFCDNKSAIAIGKNPVQHR-RTKHIDI 1297
Query: 992 RAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLLTED 1035
+ +R+ + LEY P + ADILTKPL+ F++L E+
Sbjct: 1298 KYHFVREAQQNGKIKLEYCPGELQIADILTKPLNTTRFEVLREE 1341
>At3g60170 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1339
Score = 148 bits (373), Expect = 5e-35
Identities = 143/528 (27%), Positives = 239/528 (45%), Gaps = 64/528 (12%)
Query: 529 FQNAYKKEIAQLTKMHTWSEELIDATLIPKQRI-INSMFIFTTKRD-----NSKKCRLVA 582
++ A + EI + K +TW + T +PK I +++ TK + + K RLVA
Sbjct: 839 WREAMEHEIESIVKNNTW-----ELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVA 893
Query: 583 RGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEE 637
+G Q E + P + TV T+LA++ N FQLD+ SA+L+ +LKEE
Sbjct: 894 KGYAQCYGIDYTEVFAPVARLDTVR-----TILAISSQFNWEIFQLDVKSAFLHGELKEE 948
Query: 638 LYIRAPP---HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKC--- 691
+Y+R P KV KL K+LYGLKQ+ W + I+ + ++E F +C
Sbjct: 949 VYVRQPEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKE------EFERCPSE 1002
Query: 692 --VFT-AKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVN 748
+FT + L+V L+VDD++ G + EF + F+ + H V
Sbjct: 1003 HTLFTKTRVGNILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVK 1062
Query: 749 EYD--ILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGED 806
+ D I + Y + +FGM +S K P I G
Sbjct: 1063 QSDGGIFICQRRYAREVLARFGMDESNAVKNP----------------------IVPGTK 1100
Query: 807 LTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQ 866
LT D+ K ++LVG Y+ R +++Y V ++++ P A ++ +
Sbjct: 1101 LTKDENGEKVDETMFKQLVGSLMYL-TVTRPDLMYGVCLISRFMSNPRMSHWLAAKRILR 1159
Query: 867 YLWDTRDKKLIWKYSGPKNNEITAISDAAFAGN-NDFKSQSGALYLWNGKTIAAKSSKIK 925
YL T + + ++ ++ ++ A +D+ +AG+ ND +S SG ++L I S K
Sbjct: 1160 YLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMASGAICWASKKQP 1219
Query: 926 LTCVSSTEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEF 984
+ +S+TEAE + + C + +++KL KS + D+ + + K
Sbjct: 1220 VVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTIQLSKHPV-LHG 1278
Query: 985 LKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
KH R +RD N + LEY PT++ ADI TKPL ++ F+ L
Sbjct: 1279 KSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQFEKL 1326
>At2g21460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1333
Score = 146 bits (369), Expect = 1e-34
Identities = 159/623 (25%), Positives = 287/623 (45%), Gaps = 74/623 (11%)
Query: 436 RDPFNLTSQKRPRSSNTYRE---SDQDSYDSGGDFDEEQEQECSSDNSPARPPNKRIRRV 492
+ PFN + P ++ TY E S+ D S + ++++ + +P R ++
Sbjct: 746 QSPFNPS----PATTQTYSEGVNSETDIIQSPLSYQLVRDRDRRTIRAPVRFDDE----- 796
Query: 493 NYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEELID 552
+Y+ +T +YSEA R+ N N+ ++ A +E+ K HTW
Sbjct: 797 DYLAEALYTTEDSGEIEPADYSEA-KRSMNWNK---WKLAMNEEMESQIKNHTW------ 846
Query: 553 ATLIPK---QRIINSMFIFTTK------RDNSKKCRLVARGDQQSLETYDPDQKATTVHH 603
T++ + Q++I S +I+ K + K RLVA+G Q + A V H
Sbjct: 847 -TVVKRPQHQKVIGSRWIYKFKLGIPGVEEGRFKARLVAKGYAQRKGIDYHEIFAPVVKH 905
Query: 604 LALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPP---HMNARNKVLKLNKSLY 660
+++ ++++ +L QLD+ +A+L+ +LKE++Y+ P M ++V LNKSLY
Sbjct: 906 VSIRILMSIVAQEDLELEQLDVKTAFLHGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLY 965
Query: 661 GLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAK--EPLKLVVCLFVDDMLVVGRNDE 718
GLKQ+ W ++ E G I + C + + + ++ + L+VDDMLV +N E
Sbjct: 966 GLKQAPKQWNEKFNAYM-SEIGFIRSLYDSCAYIKELSDGSRVYLLLYVDDMLVAAKNKE 1024
Query: 719 HIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKL- 777
I + +LS+RFD K + ILG+E+ + E + Q +K+
Sbjct: 1025 DISQLKEELSQRFDMKDLGAAKR----------ILGMEIIRNREENTLWLSQNGYLNKIL 1074
Query: 778 --------PHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLAS 829
H+ PL +H + R ++ + D+DY + + VG
Sbjct: 1075 ETYNMAESKHVVTPLGAHLKMR----------AATVEKQEQDEDYMKSIPY-SSAVGSIM 1123
Query: 830 YVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEIT 889
Y R ++ Y V I++++ P+ + + +Y+ + KL +K S + ++
Sbjct: 1124 YAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIKGSLGTKLQYKRSS--DFKVV 1181
Query: 890 AISDAAFAGNNDFK-SQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRG 948
DA A D + S +G ++ G TI+ KS + ++ +S+TEAE S++ V
Sbjct: 1182 GYCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQRVVALSTTEAEYMSLTEAVKEAVW 1241
Query: 949 IEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRD-ECNELGLVL 1007
++ L+ + + +++ DSQ A+A+ K E KH R IRD N G V+
Sbjct: 1242 MKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHE-RTKHIDVRYQYIRDIIANGDGDVV 1300
Query: 1008 EYIPTKENTADILTKPLSMKLFK 1030
+ I T++N ADI TK + + F+
Sbjct: 1301 K-IDTEKNPADIFTKIVPVNKFQ 1322
>At1g27285 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1432
Score = 144 bits (363), Expect = 7e-34
Identities = 173/678 (25%), Positives = 300/678 (43%), Gaps = 78/678 (11%)
Query: 371 DTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHPTLEEV 430
+T++ + S ++D + K + + N N + GP +++++ ++N ++P+
Sbjct: 799 ETSSSSSSTNNDVVVSK-DNTQVDNRNNFIGPTSSSSA---------QSQNNSNPS---- 844
Query: 431 FESIERDPFNLTSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPARPP--NKR 488
SI+ ++ P S T + S +S S + N P PP N
Sbjct: 845 -SSIQTQ-----NEPNPSPSPTPQNSSPESSPSSST-----SATSTVPNPPPPPPTNNHP 893
Query: 489 IRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNE---NEKLAFQNAYKKEIAQLTKMHT 545
+R H + + + ++ I N+ +EK ++NA +EI + +T
Sbjct: 894 MRTRAKNHITKPKTKLSLLAKTVQTRPQIPNTVNQALRDEK--WRNAMGEEINAQIRNNT 951
Query: 546 WSEELIDATLIPKQRIINSMFIFTTK-----RDNSKKCRLVARGDQQSLETYDPDQKATT 600
+ EL+ P Q +I++ +IFT K + K RLVARG +Q + + +
Sbjct: 952 F--ELVPPK--PNQNVISTKWIFTLKYLPNGTLDRYKARLVARGFRQQYGLHYSETFSPV 1007
Query: 601 VHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHM---NARNKVLKLNK 657
V L + VL +A+ + T QLD+++A+L L +E+Y+ PP + + V +L K
Sbjct: 1008 VKSLTIRLVLQLAVSRSWTIKQLDVNNAFLQGTLTDEVYVTQPPGFIDPDRPHHVCRLKK 1067
Query: 658 SLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCL-FVDDMLVVGRN 716
+LYGLKQ+ W ++ F V G VF +++V CL +VDD++V G +
Sbjct: 1068 ALYGLKQAPRAWYQELRNF-VCSLGFTNSLADTSVFVYINDIQIVYCLVYVDDIIVTGSS 1126
Query: 717 DEHIIEFISKLSKRFDTKVVNDGNH---REEDGVNEYDILGVELEYKKGEYMKFGMQKSL 773
D ++ FI+ LS+RF K D + E ++ G+ L K Y K L
Sbjct: 1127 DALVMAFITALSRRFSLKDPTDLVYFLGIEATRTSQ----GLHLMQHKYVYDLLSRMKML 1182
Query: 774 EDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQ-DYKDKVKHLQRLVGLASYVG 832
+ K + P+ +HP+ +S + LD+ +Y+ + LQ L
Sbjct: 1183 DAK--PVSTPMATHPK-----------LSLYSGIALDEPGEYRTVIGSLQYLAFT----- 1224
Query: 833 HKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAIS 892
R +I Y VN L+Q P+ A ++ +YL T ++ + + P + + A S
Sbjct: 1225 ---RPDIAYAVNRLSQFMHRPTDIHWQAAKRVLRYLAGTATHGILLRSNSPLS--LHAFS 1279
Query: 893 DAAFAGNNDFKSQSGALYLWNGKT-IAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEI 951
DA +AG+ND + A ++ G T IA S K K SSTEAE +++N + +R +
Sbjct: 1280 DADWAGDNDDFVSTNAYIVYLGSTPIAWSSKKQKGVARSSTEAEYRAVANTTSEIRWVCS 1339
Query: 952 LVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIP 1011
L+ +L T + + + KH IRD + L + +I
Sbjct: 1340 LLTELGITLPKMPVIYCDNVGATYLSANPVFHSRMKHLALDYHFIRDNVSAGALRVSHIS 1399
Query: 1012 TKENTADILTKPLSMKLF 1029
T + AD LTKPL + F
Sbjct: 1400 THDQLADALTKPLPRQHF 1417
>At2g05390 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1307
Score = 140 bits (354), Expect = 8e-33
Identities = 148/611 (24%), Positives = 282/611 (45%), Gaps = 53/611 (8%)
Query: 442 TSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPA-RPPNKRIRRVNYVHAIEH 500
T + S N++ E ++ ++ D E+ Q + P R +++ + NY+
Sbjct: 705 TEKNGEESENSHEEEGENEHNEQEQIDAEETQPSHATPLPTLRRSTRQVGKPNYLDDYVL 764
Query: 501 TKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPKQR 560
I + ++ + N+ +++A K+EI + K TWS LID + +++
Sbjct: 765 MAEIEGEQVLLAINDEPWDFKEANKLKEWRDACKEEILSIEKNKTWS--LIDLPV--RRK 820
Query: 561 IINSMFIFTTKRD-----NSKKCRLVARGDQQSLETYDPDQKATTVHHL-ALMTVLAMAL 614
+I ++F KR+ N K RLVA+G Q D D+ V + + ++A+A
Sbjct: 821 VIGLKWVFKIKRNSDGSINKYKARLVAKGYVQR-HGIDYDEVFAHVARIETIRVIIALAA 879
Query: 615 DHNLTAFQLDISSAYLYADLKEELYIRAP---PHMNARNKVLKLNKSLYGLKQSGANWCA 671
+ LD+ +A+L+ +L+E++Y+ P + + KV KL+K+LYGLKQ+ W
Sbjct: 880 SNGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWNT 939
Query: 672 LIKQFLVEECGLIEDRFWKCVFTAKEPLK-LVVCLFVDDMLVVGRNDEHIIEFISKLSKR 730
+ + L +E ++ V+ +E K L+V ++VDD+LV G + + I+ F ++ +
Sbjct: 940 KLNKIL-QELNFVKCSKEPSVYRRQEEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGK 998
Query: 731 FDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYM----KFGMQKSLEDKLPHLGVPLYS 786
F+ + + LG+E+ ++K + ++ M+ E + + L
Sbjct: 999 FEMSDLGQLTY----------YLGIEVLHRKNGIILRQERYAMKIIEEAGMSNCNPVL-- 1046
Query: 787 HPRQRKVPGCPG-DYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNI 845
+P G + + E+ + ++DY+ R++G Y+ H R ++ Y V +
Sbjct: 1047 ------IPMAAGLELCKAQEEKCITERDYR-------RMIGCLRYIVHT-RPDLSYCVGV 1092
Query: 846 LAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNNDFKSQ 905
L+++ P + Q+ +YL T L K G K+ + + A +D KS
Sbjct: 1093 LSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLK-RGFKSGLVGYSDSSHSADLDDGKST 1151
Query: 906 SGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKS-IIK 964
+G ++ + I S K ++ +SS EAE + + ++ L ++ T S +
Sbjct: 1152 AGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEVCGTTSEKVM 1211
Query: 965 LKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLV-LEYIPTKENTADILTKP 1023
++ D++ A+A+ K KH R IR EC E LV ++++P E ADILTKP
Sbjct: 1212 IRVDNKSAIALTKNLV-FHGRSKHIHRRYHFIR-ECVENNLVEVDHVPGVEQRADILTKP 1269
Query: 1024 LSMKLFKLLTE 1034
L F+ + E
Sbjct: 1270 LGRIKFREMRE 1280
>At3g45520 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1363
Score = 140 bits (352), Expect = 1e-32
Identities = 142/531 (26%), Positives = 245/531 (45%), Gaps = 36/531 (6%)
Query: 512 NYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTK 571
+Y EA+ R+EN ++ A +EI K TW+ T KQRII S +I+ K
Sbjct: 846 DYKEAV---RDENWD-KWRLAMNEEIESQLKNDTWTT----VTRPEKQRIIGSRWIYKYK 897
Query: 572 R------DNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDI 625
+ + K RLVA+G Q + A V H+++ +L++ NL QLD+
Sbjct: 898 QGIPGVEEPRFKARLVAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQENLELEQLDV 957
Query: 626 SSAYLYADLKEELYIRAPPHMNA---RNKVLKLNKSLYGLKQSGANWCALIKQFLVEECG 682
+A+L+ +LKE++Y+ P + N+V LNKSLYGLKQ+ W ++ E G
Sbjct: 958 KTAFLHGELKEKIYMMPPEGCESLFKENEVCLLNKSLYGLKQAPRQWNEKFNHYMT-EIG 1016
Query: 683 LIEDRFWKCVFTAK--EPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGN 740
+ C +T K + + + +VDDMLV N + I +LS +F+ K +
Sbjct: 1017 FKRSDYDSCAYTKKLSDDSTMYLLFYVDDMLVAANNMQAIDALKKELSIKFEMKDLGAAK 1076
Query: 741 HREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDY 800
ILG+E+ + + + Q+S +K+ L S P + G
Sbjct: 1077 ----------KILGIEIIIDREAGVLWLSQESYLNKVLKTFNMLESKPALTPL-GAHLKM 1125
Query: 801 ISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDR 860
S+ E+ +++Y + V + VG Y R ++ Y V ++++ P+ +
Sbjct: 1126 KSATEEKLSTEEEYMNSVPY-SSAVGSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLG 1184
Query: 861 AAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNND-FKSQSGALYLWNGKTIAA 919
+ +Y+ T D +L +K + + I DA +A + D +S +G ++ G TI+
Sbjct: 1185 VKWVLRYIKGTVDTRLCYKRN--SDFSICGYCDADYAADLDKRRSITGLVFTLGGNTISW 1242
Query: 920 KSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRK 979
KS ++ SSTE E S++ V ++ L+ + +++ DSQ A+A+ K
Sbjct: 1243 KSGLQRVVAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNN 1302
Query: 980 EDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFK 1030
E KH + IR+ + + + I T++N ADI TK L + F+
Sbjct: 1303 VHHE-RTKHIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKFQ 1352
>At1g58140 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1320
Score = 139 bits (351), Expect = 2e-32
Identities = 155/603 (25%), Positives = 266/603 (43%), Gaps = 91/603 (15%)
Query: 456 SDQDSYDSGGDFDEEQEQECSSD---NSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSIN 512
S+++ Y+ F+E++ + + P PP + I + ++
Sbjct: 760 SNEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPTSPT-----------SSQIEEKCEPMD 808
Query: 513 YSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPK-QRIINSMFIFTTK 571
+ EAI EK ++NA +EI + K TW + T +P + I +++ K
Sbjct: 809 FQEAI-------EKKTWRNAMDEEIKSIQKNDTW-----ELTSLPNGHKAIGVKWVYKAK 856
Query: 572 RDNSK------KCRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTA 620
+ NSK K RLVA+G Q E + P + TV ++++A +
Sbjct: 857 K-NSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVR-----LIISLAAQNKWKI 910
Query: 621 FQLDISSAYLYADLKEELYIRAPPH---MNARNKVLKLNKSLYGLKQSGANWCALIKQFL 677
Q+D+ SA+L DL+EE+YI P +KVL+L K+LYGLKQ+ W I ++
Sbjct: 911 HQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYF 970
Query: 678 VEECGLIEDRFWKCVFTAKEPLK------LVVCLFVDDMLVVGRNDEHIIEFISKLSKRF 731
E+ F KC + +K L+ CL+VDD++ G N EF +++K F
Sbjct: 971 KEK------DFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEF 1024
Query: 732 DTKVVNDGNHREEDGVNEYD--ILGVELEYKKGEYMKFGMQKSLEDKLP-HLGVPLYSHP 788
+ + ++ V + D I + Y K KF M S P G+ L
Sbjct: 1025 EMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKL---- 1080
Query: 789 RQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQ 848
+K G G D T + LVG Y+ R +ILY V ++++
Sbjct: 1081 -SKKEEG-------EGVDPTT-----------FKSLVGSLRYLTCT-RPDILYAVGVVSR 1120
Query: 849 HQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGN-NDFKSQSG 907
+ +P+ A ++ +Y+ T + L YS + ++ SD+ + G+ +D KS SG
Sbjct: 1121 YMEHPTTTHFKAAKRILRYIKGTVNFGL--HYSTTSDYKLVGYSDSDWGGDVDDRKSTSG 1178
Query: 908 ALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLK 966
++ S K + +S+ EAE + ++CV + + L+ +L L + K+
Sbjct: 1179 FVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIF 1238
Query: 967 TDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSM 1026
D++ A+A+ K + KH +R IR+ ++ + LEY+ T + ADI TKPL
Sbjct: 1239 VDNKSAIALAKNPVFHD-RSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKR 1297
Query: 1027 KLF 1029
+ F
Sbjct: 1298 EDF 1300
>At1g48710 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1352
Score = 137 bits (345), Expect = 9e-32
Identities = 144/531 (27%), Positives = 241/531 (45%), Gaps = 70/531 (13%)
Query: 525 EKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPK-QRIINSMFIFTTKRDNSK------K 577
EK ++NA +EI + K TW + T +P + I +++ K+ NSK K
Sbjct: 846 EKKTWRNAMDEEIKSIQKNDTW-----ELTSLPNGHKTIGVKWVYKAKK-NSKGEVERYK 899
Query: 578 CRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYA 632
RLVA+G Q E + P + TV ++++A + Q+D+ SA+L
Sbjct: 900 ARLVAKGYIQRAGIDYDEVFAPVARLETVR-----LIISLAAQNKWKIHQMDVKSAFLNG 954
Query: 633 DLKEELYIRAPPH---MNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFW 689
DL+EE+YI P +KVL+L K+LYGLKQ+ W I ++ E+ F
Sbjct: 955 DLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEK------DFI 1008
Query: 690 KCVFTAKEPLK------LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHRE 743
KC + +K L+ CL+VDD++ G N EF +++K F+ + ++
Sbjct: 1009 KCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYL 1068
Query: 744 EDGVNEYD--ILGVELEYKKGEYMKFGMQKSLEDKLP-HLGVPLYSHPRQRKVPGCPGDY 800
V + D I + Y K KF M S P G+ L +K G
Sbjct: 1069 GIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKL-----SKKEEG----- 1118
Query: 801 ISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDR 860
G D T + LVG Y+ R +ILY V +++++ +P+
Sbjct: 1119 --EGVDPTT-----------FKSLVGSLRYLTCT-RPDILYAVGVVSRYMEHPTTTHFKA 1164
Query: 861 AAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGN-NDFKSQSGALYLWNGKTIAA 919
A ++ +Y+ T + L YS + ++ SD+ + G+ +D KS SG ++
Sbjct: 1165 AKRILRYIKGTVNFGL--HYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTW 1222
Query: 920 KSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKR 978
S K + +S+ EAE + ++CV + + L+ +L L + K+ D++ A+A+ K
Sbjct: 1223 MSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKN 1282
Query: 979 KEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLF 1029
+ KH +R IR+ ++ + LEY+ T + ADI TKPL + F
Sbjct: 1283 PVFHD-RSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDF 1332
>At1g11265 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1352
Score = 136 bits (343), Expect = 1e-31
Identities = 143/531 (26%), Positives = 240/531 (44%), Gaps = 70/531 (13%)
Query: 525 EKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPK-QRIINSMFIFTTKRDNSK------K 577
EK ++NA +EI + K TW + T +P + I +++ K+ NSK K
Sbjct: 846 EKKTWRNAMDEEIKSIQKNDTW-----ELTSLPNGHKAIGVKWVYKAKK-NSKGEVERYK 899
Query: 578 CRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYA 632
RLVA+G Q + E + P + TV ++++A + Q+D+ SA+L
Sbjct: 900 ARLVAKGYSQRVGIDYDEVFAPVARLETVR-----LIISLAAQNKWKIHQMDVKSAFLNG 954
Query: 633 DLKEELYIRAPPH---MNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFW 689
DL+EE+YI P +KVL+L K LYGLKQ+ W I ++ E+ F
Sbjct: 955 DLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEK------DFI 1008
Query: 690 KCVFTAKEPLK------LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHRE 743
KC + +K L+ CL+VDD++ G N EF +++K F+ + ++
Sbjct: 1009 KCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYL 1068
Query: 744 EDGVNEYD--ILGVELEYKKGEYMKFGMQKSLEDKLP-HLGVPLYSHPRQRKVPGCPGDY 800
V + D I + Y K KF M S P G+ L +K G
Sbjct: 1069 GIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKL-----SKKEEG----- 1118
Query: 801 ISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDR 860
G D T + LVG Y+ R +ILY V +++++ +P+
Sbjct: 1119 --EGVDPTT-----------FKSLVGSLRYLTCT-RPDILYAVGVVSRYMEHPTTTHFKA 1164
Query: 861 AAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGN-NDFKSQSGALYLWNGKTIAA 919
A ++ +Y+ T + L YS + ++ SD+ + G+ +D KS SG ++
Sbjct: 1165 AKRILRYIKGTVNFGL--HYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTW 1222
Query: 920 KSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKR 978
S K + +S+ EAE + ++CV + + L+ +L L + K+ D++ A+A+ K
Sbjct: 1223 MSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKN 1282
Query: 979 KEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLF 1029
+ KH +R IR+ ++ + LEY+ T + AD TKPL + F
Sbjct: 1283 PVFHD-RSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENF 1332
>At3g61330 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1352
Score = 135 bits (341), Expect = 3e-31
Identities = 139/535 (25%), Positives = 241/535 (44%), Gaps = 78/535 (14%)
Query: 525 EKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPK-QRIINSMFIFTTKRDNSK------K 577
EK ++NA +EI + K TW + T +P + I +++ K+ NSK K
Sbjct: 846 EKKTWRNAMDEEIKSIQKNDTW-----ELTSLPNGHKAIGVKWVYKAKK-NSKGEVERYK 899
Query: 578 CRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYA 632
RLVA+G Q + E + P + TV ++++A + Q+D+ SA+L
Sbjct: 900 ARLVAKGYSQRVGIDYDEVFAPVARLETVR-----LIISLAAQNKWKIHQMDVKSAFLNG 954
Query: 633 DLKEELYIRAPPH---MNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFW 689
DL+EE+YI P +KVL+L K LYGLKQ+ W I ++ E+ F
Sbjct: 955 DLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEK------DFI 1008
Query: 690 KCVFTAKEPLK------LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHRE 743
KC + +K L+ CL+VDD++ G N EF +++K F+ +
Sbjct: 1009 KCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDI------- 1061
Query: 744 EDGVNEYDILGVELEYK-------KGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGC 796
G+ Y LG+E++ + + Y K ++K D + P+ C
Sbjct: 1062 --GLMSY-YLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPM----------EC 1108
Query: 797 PGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAK 856
E +D +K V L+ L R +ILY V +++++ +P+
Sbjct: 1109 GIKLSKKEEGEGVDPTTFKSLVGSLRYLTCT--------RPDILYAVGVVSRYMEHPTTT 1160
Query: 857 VLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGN-NDFKSQSGALYLWNGK 915
A ++ +Y+ T + L YS + ++ SD+ + G+ +D KS SG ++
Sbjct: 1161 HFKAAKRILRYIKGTVNFGL--HYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDT 1218
Query: 916 TIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMA 974
S K + +S+ EAE + ++CV + + L+ +L L + K+ D++ A+A
Sbjct: 1219 AFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIA 1278
Query: 975 IIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLF 1029
+ K + KH +R IR+ ++ + LEY+ T + AD TKPL + F
Sbjct: 1279 LAKNPVFHD-RSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENF 1332
>At2g15650 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1347
Score = 135 bits (341), Expect = 3e-31
Identities = 146/582 (25%), Positives = 262/582 (44%), Gaps = 57/582 (9%)
Query: 468 DEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKL 527
++++E+E S + + + + + E +GI + + R + E
Sbjct: 791 NDQEERETSESPKKYKSMKEILEKAPRMENDEAAQGIEACLVANEEPQTYDEARGDKE-- 848
Query: 528 AFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNS-----KKCRLVA 582
++ A +EI + K TW +L+D K+ +I+ +I+ K D S K RLVA
Sbjct: 849 -WEEAMNEEIKVIEKNRTW--KLVDKP--EKKNVISVKWIYKIKTDASGNHVKHKARLVA 903
Query: 583 RGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEE 637
RG Q LET+ P + T+ L LA A +Q+D+ SA+L +L+EE
Sbjct: 904 RGFSQEYGIDYLETFAPVSRYDTIRAL-----LAYAAQMKWRLYQMDVKSAFLNGELEEE 958
Query: 638 LYIRAPPHM---NARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFT 694
+Y+ PP KVL+L K+LYGLKQ+ W I + ++ G +++
Sbjct: 959 VYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQN-GFARSMNDAALYS 1017
Query: 695 AKEPLK-LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYD-- 751
K+ L+V L+VDD+++ G N I F + F+ + N+ VN+ D
Sbjct: 1018 KKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGMEVNQDDSG 1077
Query: 752 ILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDD 811
I + +Y KFGM++S + PL +++ V G DD
Sbjct: 1078 IFLSQEKYANKLIDKFGMKES-----KSVSTPLTPQGKRKGVEG--------------DD 1118
Query: 812 QDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDT 871
+++ D K+ +R+VG Y+ R +++Y + L+++ PS + A ++ +Y+ T
Sbjct: 1119 KEFADPTKY-RRIVGGLLYLCAS-RPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGT 1176
Query: 872 RDKKLIWKYSGPKNNEITAISDAAFAGN-NDFKSQSGALYLWNGKTIAAKSSKIKLTCVS 930
+ ++ ++ + + SD+ + G+ D KS +G ++ +S K + S
Sbjct: 1177 SNFGVL--FTSKETPRLVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQS 1234
Query: 931 STEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHT 989
+ EAE ++ ++ L + L K I + D++ A+A I R KH
Sbjct: 1235 TAEAEYIAVCAATNQAIWLQRLFEDFGLKFKEGIPILCDNKSAIA-IGRNPVQHRRTKHI 1293
Query: 990 GSRAMRIRDECNELGLV-LEYIPTKENTADILTKPLSMKLFK 1030
+ +R E GL+ LEY ++ AD+LTK LS+ F+
Sbjct: 1294 EIKYHFVR-EAEHKGLIQLEYCKGEDQLADVLTKALSVSRFE 1334
>At3g29510 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1158
Score = 134 bits (338), Expect = 6e-31
Identities = 162/608 (26%), Positives = 268/608 (43%), Gaps = 96/608 (15%)
Query: 480 SPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINY-SEAISRNRNE---NEKLAFQNAYK- 534
SP PPN+ IR H E GI SINY I NR E +EK A++ AY+
Sbjct: 564 SPKEPPNE-IRDAE-AHGPE---GIDNDEISINYIMSGIKWNRKEVDVDEKFAYEVAYEI 618
Query: 535 ------KEIAQLTKMHTWSE--ELIDATLIPKQRI---------------INSMFIFTTK 571
I + T+ W + E ID L +R + ++F K
Sbjct: 619 SEDHEPTSIIECTQRSDWLKWKEAIDVELGSLKRRDVFGPILRTPSNIKPVGHKWVFVRK 678
Query: 572 RDNSK-----KCRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAF 621
R+ K RLVA+G Q ETY P ATT +L +++A+ NL
Sbjct: 679 RNEKNEIVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYL-----ISLAIRENLDLR 733
Query: 622 QLDISSAYLYADLKEELYIRAPPHMNARNK---------VLKLNKSLYGLKQSGANWCAL 672
+D+ +AYLY L E+Y+R P + + K ++LN+SLYGLKQSG W
Sbjct: 734 LMDVVTAYLYGPLDNEIYMRLPEGIELKGKDKNGSRDQYCIRLNRSLYGLKQSGRMWYNR 793
Query: 673 IKQFLVEECGLIEDRFWKCVFTAKEPLK--LVVCLFVDDMLVVGRNDEHIIEFISKLSKR 730
+ ++LV+E G D C+F K K +++ ++VDD+ ++G + E I + + L K
Sbjct: 794 LSEYLVKE-GYKNDPISPCIFIKKFASKGFVIIAVYVDDLNILGTSGE-IAQTVEYLKKE 851
Query: 731 FDTKVVNDGNHREEDGVNEYDILGVELEY-KKG------EYMKFGMQKSLEDKLPHLGVP 783
F+ K + G ++ LG++LEY KG Y + +++ DK L
Sbjct: 852 FEMK---------DLGKTKF-CLGLQLEYIDKGILVHQKAYTETVLKRFNMDKAHPL--- 898
Query: 784 LYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYV 843
+ P Q + G D +D D++ ++ +L +G Y+ R +I + V
Sbjct: 899 --TSPMQVRSLGLDSDPFGPKKD---DEEILGPEMPYLS-AIGALMYLSSHTRPDICFAV 952
Query: 844 NILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGN-NDF 902
N+L++ P+ + + L +YL T D L Y+ + +DA + + ++
Sbjct: 953 NLLSRFSSCPTKRHWEGIKHLLRYLQGTIDFGLY--YTNHNKEGLVGFADAGYLSDPHNG 1010
Query: 903 KSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEI---YSISNCVTYLRGI--EILVD-KL 956
KSQ+G +++ G I+ +S K + SS AEI + S +LR + I D +
Sbjct: 1011 KSQTGYVFIHGGTAISWRSMKQTIAATSSNHAEILAMHEASRECVWLRSMTQHIRADCGM 1070
Query: 957 LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENT 1016
+ K + D+ +A +K KH + D + + + + + +N+
Sbjct: 1071 VEDKEPTIIYEDNAACIAQLKEGYIKGDRTKHILPKFFYTHDLQKDGEVKVVQVRSSDNS 1130
Query: 1017 ADILTKPL 1024
AD+ TK L
Sbjct: 1131 ADLFTKAL 1138
>At2g07550 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1356
Score = 134 bits (336), Expect = 1e-30
Identities = 149/596 (25%), Positives = 262/596 (43%), Gaps = 41/596 (6%)
Query: 447 PRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQ 506
P + +T + D D S + +++ D R P + Y A+ T+
Sbjct: 779 PTTQDTNDDEDSDVNQSPLSYHLVRDR----DKREIRAPRRFDDEDYYAEALYTTEDGEA 834
Query: 507 MNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMF 566
+ NY +A + KLA +EI K +TW+ T QRII +
Sbjct: 835 VEPE-NYRKAKLDANFDKWKLAMD----EEIDSQEKNNTWTI----VTRPENQRIIGCRW 885
Query: 567 IFTTK------RDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTA 620
IF K + K RLVA+G Q + A V H+++ +L++ +L
Sbjct: 886 IFKYKLGILGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQEDLEL 945
Query: 621 FQLDISSAYLYADLKEELYIRAP---PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFL 677
QLD+ +A+L+ +LKE++Y+ P M N+V LNK+LYGLKQ+ W F+
Sbjct: 946 EQLDVKTAFLHGELKEKIYMSPPEGYESMFKANEVCLLNKALYGLKQAPKQWNEKFDNFM 1005
Query: 678 VEECGLIEDRFWKCVFTAKEP--LKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKV 735
E C ++ + C +T P + + ++VDD+LV +N E I + L RF+ K
Sbjct: 1006 KEIC-FVKSAYDSCAYTKVLPDGSVMYLLIYVDDILVASKNKEAITALKANLGMRFEMKD 1064
Query: 736 VNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPG 795
+ + LGV ++G K ++ + P + PL +H +
Sbjct: 1065 LGAAKKILGMEIIRDRTLGVLWLSQEGYLNKILETYNMAEAKPAM-TPLGAHFK------ 1117
Query: 796 CPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSA 855
+ ++ E + D+D+ V + VG Y R ++ Y V I+++ P
Sbjct: 1118 ----FQAATEQKLIRDEDFMKSVPY-SSAVGSIMYAMLGTRPDLAYPVGIISRFMSQPIK 1172
Query: 856 KVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNND-FKSQSGALYLWNG 914
+ + +Y+ T +L +K S + I DA +A + D +S +G ++ G
Sbjct: 1173 EHWLGVKWVLRYIKGTLKTRLCYKKS--SSFSIVGYCDADYAADLDKRRSITGLVFTLGG 1230
Query: 915 KTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMA 974
TI+ KS ++ S+TE+E S++ V ++ L+ + +++ DSQ A+A
Sbjct: 1231 NTISWKSGLQRVVAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIA 1290
Query: 975 IIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFK 1030
+ K E KH + IR+ ++ + + I T++N ADI TK L++ F+
Sbjct: 1291 LSKNNVHHE-RTKHIDVKYHFIREIISDGTVEVLKISTEKNPADIFTKVLAVSKFQ 1345
>At1g21945 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1311
Score = 133 bits (334), Expect = 2e-30
Identities = 158/646 (24%), Positives = 276/646 (42%), Gaps = 112/646 (17%)
Query: 420 ENYNHPTLEEVFESIERDPFNLTSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDN 479
E+YN F E D T ++ P T R + S Q +E SS+
Sbjct: 722 EDYNF------FPHFEEDEPEPTREEPPSEEPTTRPTSLTS---------SQIEESSSER 766
Query: 480 SPARPPNKRIRRVNYVHAIEHTKGIMQMNT------SINYSEAISRNRNENEKLAFQNAY 533
+P R R + ++ + + + + +++ EAI EK ++NA
Sbjct: 767 TP------RFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAI-------EKKTWRNAM 813
Query: 534 KKEIAQLTKMHTWSEELIDATLIPK-QRIINSMFIFTTKRDNSK------KCRLVARGDQ 586
+EI + K TW + T +P + I +++ K+ NSK K RLVA+G
Sbjct: 814 DEEIKSIQKNDTW-----ELTSLPNGHKAIGVKWVYKAKK-NSKGEVERYKARLVAKGYS 867
Query: 587 QSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIR 641
Q E + P + TV ++++A + Q+D A+L D +EE+YI
Sbjct: 868 QRAGIDYDEVFAPVARLETVR-----LIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIE 922
Query: 642 APPHMNAR---NKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEP 698
P + +KVL+L K+LYGLKQ+ W I ++ E+ F KC +
Sbjct: 923 QPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEK------DFIKCPYEHALY 976
Query: 699 LK------LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDI 752
+K L+ CL+VDD++ G N EF +++K F+ + G+ Y
Sbjct: 977 IKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDI---------GLMSY-Y 1026
Query: 753 LGVELEYKKGE-------YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGE 805
LG+E++ + Y K ++K D + P+ C E
Sbjct: 1027 LGIEVKQEDNRIFITQEGYAKEVLKKFKMDDSNPVCTPM----------ECGIKLSKKEE 1076
Query: 806 DLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLC 865
+D +K V L+ L R +ILY V +++++ +P+ A ++
Sbjct: 1077 GEGVDPTTFKSLVGSLRYLTCT--------RPDILYAVGVVSRYMEHPTTTHFKAAKRIL 1128
Query: 866 QYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGN-NDFKSQSGALYLWNGKTIAAKSSKI 924
+Y+ T + L YS + ++ SD+ + + +D KS SG ++ S K
Sbjct: 1129 RYIKGTVNFGL--HYSTTSDYKLVGYSDSDWGRDVDDRKSTSGFVFYIGDTAFTWMSKKQ 1186
Query: 925 KLTCVSSTEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAE 983
+ +S+ EAE + ++CV + + L+ +L L + K+ D++ A+A+ K +
Sbjct: 1187 PIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHD 1246
Query: 984 FLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLF 1029
KH +R IR+ ++ + LEY+ T + ADI TKPL + F
Sbjct: 1247 -RSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDF 1291
>At1g37110 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1356
Score = 132 bits (333), Expect = 2e-30
Identities = 145/608 (23%), Positives = 258/608 (41%), Gaps = 59/608 (9%)
Query: 455 ESDQDSYDSGGDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNT----- 509
+SD + G + +E+ S+ + P KR Y A + + + T
Sbjct: 764 QSDSEPITEGEQSSDSEEEVEYSEKTQETP--KRTGLTTYKLARDRVRRNINPPTRFTEE 821
Query: 510 -SINYSEAISRNRNENEKLAFQNAYKK------------EIAQLTKMHTWSEELIDATLI 556
S+ ++ + N E ++Q A + E+ L K TW +L+D
Sbjct: 822 SSVTFALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTW--DLVDK--- 876
Query: 557 PKQR-IINSMFIFTTK------RDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTV 609
PK R II ++F K K RLVA+G Q + A V H+++ +
Sbjct: 877 PKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKHVSIRIL 936
Query: 610 LAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHM---NARNKVLKLNKSLYGLKQSG 666
+++ +D +L Q+D+ + +L+ DL+EELY+ P ++ NKV +L KSLYGLKQS
Sbjct: 937 MSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSP 996
Query: 667 ANWCALIKQFLVEECGLIEDRFWKCVFT--AKEPLKLVVCLFVDDMLVVGRNDEHIIEFI 724
W +F+ + I CV+ E + + L+VDDML+ G + I
Sbjct: 997 RQWNKRFDRFMSSQ-QFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVK 1055
Query: 725 SKLSKRFDTKVVNDGNHREEDGVNEYDILGVEL-EYKKGEYMKFGMQKSLEDKLPHLGVP 783
+LS F+ K + + ILG+++ +KG +K + + L +
Sbjct: 1056 EQLSTEFEMKDMGGASR----------ILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNM- 1104
Query: 784 LYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYV 843
K+ P + +D+ V VG Y R ++ Y +
Sbjct: 1105 -----SGAKMTNAPVGAHFKLAAVREEDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAI 1159
Query: 844 NILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNND-F 902
+++++ P + + + +YL +D L+ ++ K+ +T D+ +A + D
Sbjct: 1160 CLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLV--FTKEKDFTVTGYCDSNYAADLDRR 1217
Query: 903 KSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSI 962
+S SG ++ G T++ K+S + +S+TEAE +++ I+ L+ + +
Sbjct: 1218 RSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDK 1277
Query: 963 IKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTK 1022
+K+ DSQ A+ + K E KH R IRD + + I T N D LTK
Sbjct: 1278 VKIWCDSQSAICLSKNSVYHE-RTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTK 1336
Query: 1023 PLSMKLFK 1030
+ + FK
Sbjct: 1337 CIPVNKFK 1344
>At2g13930 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1335
Score = 132 bits (331), Expect = 4e-30
Identities = 147/633 (23%), Positives = 269/633 (42%), Gaps = 89/633 (14%)
Query: 437 DPFNLTSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPARPPNKRIRRVNYVH 496
+P T+ P ++ D++S EE++ + D S + R+RR
Sbjct: 742 NPSEATTSHNPVLNSPTHSQDEES--------EEEDSDAVEDLSTYQLVRDRVRRT---- 789
Query: 497 AIEHTKGIMQMNTSINYSEAI-----SRNRNENEKLAFQNAY------------KKEIAQ 539
++ N N S + S + + E ++Q A K+E+
Sbjct: 790 --------IKANPKYNESNMVGFAYYSEDDGKPEPKSYQEALLDPDWEKWNAAMKEEMVS 841
Query: 540 LTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNSKK------CRLVARGDQQSLETYD 593
++K HTW +L+ T K ++I ++FT K RLVA+G Q
Sbjct: 842 MSKNHTW--DLV--TKPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFTQKEGVDY 897
Query: 594 PDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNAR---N 650
+ + V H+++ +L+M + +N+ Q+D+ +A+L+ L+EE+Y+ P + N
Sbjct: 898 NEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSN 957
Query: 651 KVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAK--EPLKLVVCLFVD 708
KV L +SLYGLKQS W +F+ + CV+ K + + L+VD
Sbjct: 958 KVCLLKRSLYGLKQSPRQWNLRFDEFM-RGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVD 1016
Query: 709 DMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGE----- 763
DML+ N + E LS+ F+ K + D ILG+E+ +
Sbjct: 1017 DMLIASANKSEVNELKQLLSREFEMKDLGDAKK----------ILGMEISRDRDAGLLTL 1066
Query: 764 ----YMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVK 819
Y+K ++ D + PL H + + + D ++Q + K+
Sbjct: 1067 SQEGYVKKVLRSFQMDNAKPVSTPLGIHFK-----------LKAATDKEYEEQFERMKIV 1115
Query: 820 HLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWK 879
+G Y R ++ Y + ++++ P + +Y+ T KKL ++
Sbjct: 1116 PYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMRGTEKKKLCFR 1175
Query: 880 YSGPKNNEITAISDAAFAGNNDFK-SQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYS 938
++ + D+ + N D + S +G ++ G TI+ KS K+ +SSTEAE +
Sbjct: 1176 KQ--EDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAISSTEAEYMA 1233
Query: 939 ISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRD 998
++ V ++ +L +++ +++ +DSQ A+ + K E KH R IRD
Sbjct: 1234 LTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHE-RTKHIDIRLHFIRD 1292
Query: 999 -ECNELGLVLEYIPTKENTADILTKPLSMKLFK 1030
C L V++ I T+ N A+I TK + + F+
Sbjct: 1293 IICAGLIKVVK-IATECNPANIFTKTVPLAKFE 1324
>At1g32590 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1334
Score = 129 bits (323), Expect = 3e-29
Identities = 135/528 (25%), Positives = 242/528 (45%), Gaps = 66/528 (12%)
Query: 529 FQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNSK-----KCRLVAR 583
++ A + EI + + +TW EL++ L + ++I +IF TK + K RLVA+
Sbjct: 838 WRKAMEAEITSIEENNTW--ELVE--LPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAK 893
Query: 584 GDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEEL 638
G Q E + P K T+ +L +A + + FQLD+ SA+L+ DLKE++
Sbjct: 894 GYHQRYGVDFYEVFAPVAKWDTIR-----LILGLAAEKGWSVFQLDVKSAFLHGDLKEDV 948
Query: 639 YIRAPPHMNAR---NKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKC---- 691
++ P +KV KL K+LYGLKQ+ W + I++F +E F KC
Sbjct: 949 FVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKE------GFEKCYCEH 1002
Query: 692 -VFTAKEPLK-LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGV-- 747
+F KE LVV ++VDD++ G + E I F + + + F + + G + GV
Sbjct: 1003 TLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEF--AMTDLGKMKYFLGVEV 1060
Query: 748 --NEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGE 805
+E I + +Y K+GM+ K P + P Q+ GD + E
Sbjct: 1061 IQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIV-------PGQKLTKAGAGDAVDPTE 1113
Query: 806 DLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLC 865
++L+G Y+ R ++++ VN+++++ P+ + L ++
Sbjct: 1114 ---------------FKQLIGSLRYL-TTTRPDLIFSVNLVSRYMESPNEQHLLAVKRIL 1157
Query: 866 QYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGN-NDFKSQSGALYLWNGKTIAAKSSKI 924
+Y+ T D + ++ G E+ D+ +AG+ +D KS SG +++ G IA S K
Sbjct: 1158 RYVQGTLDLGIQYERGGA--TELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQ 1215
Query: 925 KLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEF 984
+ +S+TEAE S S + +++++ + L + + +
Sbjct: 1216 PIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHG 1275
Query: 985 LKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
KH R +R+ E + L+Y T + ADI+TK + ++F+ L
Sbjct: 1276 RSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEEL 1323
>At3g25450 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1343
Score = 127 bits (318), Expect = 1e-28
Identities = 146/599 (24%), Positives = 263/599 (43%), Gaps = 82/599 (13%)
Query: 468 DEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKL 527
+ E+ + + P R +++ R NY+ I + + ++ + N+
Sbjct: 771 ETEEHDQSQEEPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHLLLAVNDEPWDFKEANKSK 830
Query: 528 AFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRD-----NSKKCRLVA 582
+++A K+EI + K TWS L+D + K I ++F K + N K RLVA
Sbjct: 831 EWRDACKEEIQSIEKNRTWS--LVDLPVGSKA--IGVKWVFKLKHNSDGSINKYKARLVA 886
Query: 583 RGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEE 637
+G Q E + P + TV ++A+A + LD+ +A+L+ +L+E+
Sbjct: 887 KGYVQRHGVDFEEVFAPVARIETVR-----LIIALAASNGWEIHHLDVKTAFLHGELRED 941
Query: 638 LYIRAP---PHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFT 694
+Y+ P + ++ KV KL+K+LYGL+Q+ W + + L E +F KC
Sbjct: 942 VYVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKEL------KFEKC--- 992
Query: 695 AKEPLK---------LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREED 745
KEP LVV ++VDD+LV G N + I+ F + +F+ + +
Sbjct: 993 HKEPSLYRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTY---- 1048
Query: 746 GVNEYDILGVE-------LEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPG 798
LG+E + K+ Y K ++++ K + P+ + K
Sbjct: 1049 ------YLGIEVLQSKDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSK------ 1096
Query: 799 DYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVL 858
+ ++ +D+ DY+ R +G Y+ H R ++ Y V IL+++ P
Sbjct: 1097 ----AQDEKRIDETDYR-------RNIGCLRYLLHT-RPDLSYNVGILSRYLQEPRESHG 1144
Query: 859 DRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAF-AGNNDFKSQSGALYLWNGKTI 917
Q+ +YL T L +K +N + SD++ +D KS G ++ N I
Sbjct: 1145 AALKQILRYLQGTTSHGLYFKKG--ENAGLIGYSDSSHNVDLDDGKSTGGHIFYLNDCPI 1202
Query: 918 AAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTK-SIIKLKTDSQPAMAII 976
S K ++ +SS EAE + + ++ L+ +++ T+ + ++ D++ A+A+
Sbjct: 1203 TWCSQKQQVVTLSSCEAEFMAATEAAKQAIWLQELLAEVIGTECEKVTIRVDNKSAIALT 1262
Query: 977 KRKEDAEFLKKHTGSRAMRIRDECNELGLV-LEYIPTKENTADILTKPLSMKLFKLLTE 1034
K KH R IR EC E G + +E++P ADILTK L F + E
Sbjct: 1263 KNPV-FHGRSKHIHRRYHFIR-ECVENGQIEVEHVPGVRQKADILTKALGKIKFLEMRE 1319
>At1g53810 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1522
Score = 125 bits (315), Expect = 3e-28
Identities = 164/696 (23%), Positives = 294/696 (41%), Gaps = 103/696 (14%)
Query: 366 ADSVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHP 425
A +T PN S+D N+ +I + +G+ + + S SY T ++ P
Sbjct: 801 ASVAAETAGPNASDDTSQDNE---TISVVSGSPERTTGLDSASIGDSYHSPTADSSHPSP 857
Query: 426 TLEEVFESIERDPFNLTSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPARPP 485
S + P + ++ ++ T + + P
Sbjct: 858 ARSSPASSPQGSPIQMAPAQQVQAPVT-----------------NEHAMVTRGKEGISKP 900
Query: 486 NKRIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHT 545
NKR + + +I K + +EA+ + NA ++E+ + T
Sbjct: 901 NKRYVLLTHKVSIPEPKTV---------TEALKHP-------GWNNAMQEEMGNCKETET 944
Query: 546 WSEELIDATLIPKQRIINSMFIFTTKRD-----NSKKCRLVARGDQQS-----LETYDPD 595
W+ L+ + P ++ SM++F TK + K RLVA+G +Q LETY P
Sbjct: 945 WT--LVPYS--PNMNVLGSMWVFRTKLHADGSLDKLKARLVAKGFKQEEGIDYLETYSPV 1000
Query: 596 QKATTVHH-LALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNARNK--- 651
+ TV L + TVL L Q+D+ +A+L+ DL E +Y+R P ++K
Sbjct: 1001 VRTPTVRLILHVATVLKWELK------QMDVKNAFLHGDLTETVYMRQPAGFVDKSKPDH 1054
Query: 652 VLKLNKSLYGLKQSGANWCALIKQFLVEE---CGLIEDRFWKCVFTAKEPLKLVVCLFVD 708
V L+KSLYGLKQS W FL+E C L + + V+++ + L++ L+VD
Sbjct: 1055 VCLLHKSLYGLKQSPRAWFDRFSNFLLEFGFICSLFDPSLF--VYSSNNDVILLL-LYVD 1111
Query: 709 DMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELE-YKKGEYMKF 767
DM++ G N + + ++ L+K F R +D + LG++++ Y G +M
Sbjct: 1112 DMVITGNNSQSLTHLLAALNKEF----------RMKDMGQVHYFLGIQIQTYDGGLFM-- 1159
Query: 768 GMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGL 827
QK ED L + S P +P D +S+ +++ D ++ LQ L
Sbjct: 1160 SQQKYAEDLLITASMANCS-PMPTPLP-LQLDRVSNQDEVFSDPTYFRSLAGKLQYLT-- 1215
Query: 828 ASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYL---------WDTRDKKLIW 878
R +I + VN + Q PS + ++ +Y+ +++ ++
Sbjct: 1216 ------LTRPDIQFAVNFVCQKMHQPSVSDFNLLKRILRYIKGTVSMGIQYNSNSSSVVS 1269
Query: 879 KYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCV-SSTEAEIY 937
Y + +++A SD+ +A + + G + G+ I + SSK + T SSTEAE
Sbjct: 1270 AYE--SDYDLSAYSDSDYANCKETRRSVGGYCTFMGQNIISWSSKKQPTVSRSSTEAEYR 1327
Query: 938 SISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRI 996
S+S + ++ + ++ ++ ++ +L D+ A+ + KH I
Sbjct: 1328 SLSETASEIKWMSSILREIGVSLPDTPELFCDNLSAV-YLTANPAFHARTKHFDVDHHYI 1386
Query: 997 RDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
R+ LV+++IP ADI TK L + F L
Sbjct: 1387 RERVALKTLVVKHIPGHLQLADIFTKSLPFEAFTRL 1422
>At4g10460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1230
Score = 123 bits (308), Expect = 2e-27
Identities = 126/508 (24%), Positives = 226/508 (43%), Gaps = 68/508 (13%)
Query: 540 LTKMHTWSEELIDATLIPK---QRIINSMFIFTTKRDNSK------KCRLVARGDQQSLE 590
L K HTW T++ K +R+I +IF K K RLV++G Q
Sbjct: 763 LLKNHTW-------TVVKKPVGERVIGCKWIFKRKPGTPGIEQPRFKARLVSKGYAQREG 815
Query: 591 TYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNARN 650
D + V H+++ +LA+ + N QLD+ +A+L+ DL+E++++ AP ++
Sbjct: 816 IDYTDIFSPVVKHVSIRILLAIVAEENYELEQLDVKTAFLHGDLEEKIFMEAPEGYESQF 875
Query: 651 K---VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVF--TAKEPLKLVVCL 705
K V LNK++YGLKQS W +++ E G KC + + ++ K+ + +
Sbjct: 876 KQGEVCLLNKTMYGLKQSPRRWNQKFDSYML-EIGFERSPRNKCAYIKSLEDGSKVYLLI 934
Query: 706 FVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYM 765
+VDDMLV R+ + I E KLS++F+ K + ++ + G L + +Y+
Sbjct: 935 YVDDMLVAARDMQVISELKQKLSEKFEMKDLGAAKRILGMEISRDRVKGT-LTLSQEDYL 993
Query: 766 KFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLV 825
++ D+ + PL +H + ++ E L D++Y V + V
Sbjct: 994 SKVLETYNVDQCKFVVTPLGAHLKMH----------AATEQQLLSDEEYMKSVPY-SNAV 1042
Query: 826 GLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKN 885
G Y R ++ Y V I+++ S PK
Sbjct: 1043 GSIMYSMIDTRPDLAYCVGIISRFM------------------------------SKPKG 1072
Query: 886 NEIT--AISDAAFAGN-NDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNC 942
++T D+ +A N + +S SG ++ G TI +S K+ +SST+A S++
Sbjct: 1073 ADLTLRGYCDSDYAANLENRRSISGMVFTLGGSTINLRSCLQKVVVMSSTKAGYMSLTEA 1132
Query: 943 VTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNE 1002
V ++ L+ + +++ DSQ A+A+ K + KH + +IR+ +
Sbjct: 1133 VKEAIWLKGLLQDFGYEQKTVEIFCDSQSAIALSKNNVHHD-RTKHIDIKYHKIREVIAD 1191
Query: 1003 LGLVLEYIPTKENTADILTKPLSMKLFK 1030
+ ++ I T N+ADI TK + + FK
Sbjct: 1192 GVVEVKKICTLVNSADIFTKVVPVSKFK 1219
>At1g59265 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1466
Score = 123 bits (308), Expect = 2e-27
Identities = 172/694 (24%), Positives = 286/694 (40%), Gaps = 103/694 (14%)
Query: 381 DDTINDKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFN 440
D + + S P + GP+ TT T T+ H + + + +P N
Sbjct: 818 DSSFSSSFPSSPEPTAPRQNGPQPTTQP--------TQTQTQTHSSQN----TSQNNPTN 865
Query: 441 LTSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEH 500
+ + +S +T +S S SS ++ PP+ I + I +
Sbjct: 866 ESPSQLAQSLSTPAQSSSSS--------PSPTTSASSSSTSPTPPSILIHPPPPLAQIVN 917
Query: 501 TKGIMQMNT--------------SINYSEAISRNRNENEKLAFQ--------NAYKKEIA 538
+NT + YS A+S + A Q NA EI
Sbjct: 918 NNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEIN 977
Query: 539 QLTKMHTWSEELIDATLIPKQ----RIINSMFIFTTKRD-----NSKKCRLVARGDQQS- 588
HTW L+P I+ +IFT K + N K RLVA+G Q
Sbjct: 978 AQIGNHTWD-------LVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRP 1030
Query: 589 ----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPP 644
ET+ P K+T++ VL +A+D + QLD+++A+L L +++Y+ PP
Sbjct: 1031 GLDYAETFSPVIKSTSIR-----IVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPP 1085
Query: 645 ---HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKL 701
+ N V KL K+LYGLKQ+ W ++ +L+ G + +F + +
Sbjct: 1086 GFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLL-TIGFVNSVSDTSLFVLQRGKSI 1144
Query: 702 VVCL-FVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYK 760
V L +VDD+L+ G + + + LS+RF K +H E + LG+E + +
Sbjct: 1145 VYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVK-----DHEE-----LHYFLGIEAK-R 1193
Query: 761 KGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKH 820
+ ++ + D L + + + P + P + SG LT D +Y+ V
Sbjct: 1194 VPTGLHLSQRRYILDLLARTNM-ITAKPVTTPMAPSPKLSLYSGTKLT-DPTEYRGIVGS 1251
Query: 821 LQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKY 880
LQ L R +I Y VN L+Q P+ + L ++ +YL T + + K
Sbjct: 1252 LQYLAFT--------RPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLK- 1302
Query: 881 SGPKNNEIT--AISDAAFAGN-NDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIY 937
K N ++ A SDA +AG+ +D+ S +G + I+ S K K SSTEAE
Sbjct: 1303 ---KGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1359
Query: 938 SISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRI 996
S++N + ++ I L+ +L + + D+ A + + KH I
Sbjct: 1360 SVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRM-KHIAIDYHFI 1418
Query: 997 RDECNELGLVLEYIPTKENTADILTKPLSMKLFK 1030
R++ L + ++ T + AD LTKPLS F+
Sbjct: 1419 RNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQ 1452
>At5g35820 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1342
Score = 122 bits (305), Expect = 4e-27
Identities = 128/510 (25%), Positives = 230/510 (45%), Gaps = 40/510 (7%)
Query: 529 FQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTK------RDNSKKCRLVA 582
++ A +E+ + K TW ++ID +R+I +IF K K RLVA
Sbjct: 838 WKQATIEEMDSMKKNDTW--DVIDKP--EGKRVIGCKWIFKRKAGIPGVEPPRYKARLVA 893
Query: 583 RGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRA 642
+G Q + + V H+++ +L++ + ++ QLD+ +A+L+ +L E + +
Sbjct: 894 KGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKTAFLHGNLDEYILMSQ 953
Query: 643 PPHM---NARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAK--E 697
P ++ KV L KSLYGLKQS W F++ G ++ CV+T + +
Sbjct: 954 PEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMINS-GYQRSKYNPCVYTQQLND 1012
Query: 698 PLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNH---REEDGVNEYDILG 754
+ + L+VDDML+ +N + I + L++ F+ K + E E IL
Sbjct: 1013 GSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFEMKDLGPARKILGMEITRNREQGILD 1072
Query: 755 V-ELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQD 813
+ + EY G FGM +S + PL +H + R ++ E D +
Sbjct: 1073 LSQSEYVAGVLRAFGMDQSKVSQ-----TPLGAHFKLR----------AANEKTLARDAE 1117
Query: 814 YKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRD 873
Y V + +G Y R ++ Y V ++++ PS + + +Y+ T+D
Sbjct: 1118 YMKLVPY-PNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVMRYMKGTQD 1176
Query: 874 KKLIWKYSGPKNNEITAISDAAFAGNNDFK-SQSGALYLWNGKTIAAKSSKIKLTCVSST 932
L ++ EI D+ +A + D + S +G ++ G TI+ KS ++ +S+T
Sbjct: 1177 TCL--RFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRVVALSTT 1234
Query: 933 EAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSR 992
EAE +++ V + L ++ + +++ DSQ A+A+ K E KH R
Sbjct: 1235 EAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHE-RTKHIDVR 1293
Query: 993 AMRIRDECNELGLVLEYIPTKENTADILTK 1022
IR++ + + + I T N ADI TK
Sbjct: 1294 YHFIREKIADGEIQVVKISTTWNPADIFTK 1323
>At1g44510 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1459
Score = 122 bits (305), Expect = 4e-27
Identities = 165/687 (24%), Positives = 286/687 (41%), Gaps = 66/687 (9%)
Query: 368 SVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHPTL 427
S P+T +P ++D ++ + P + + R +T S PS T + +
Sbjct: 799 SSPETPSPPQQQNDSPVSPRQTGSP--TPSHHSQVRDSTLSPSPSVSNSEPTAPHENGPE 856
Query: 428 EEVFESIERDPF-----NLTSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPA 482
E +S PF N + P SS R D+ + + Q ++ NS +
Sbjct: 857 PEA-QSNPNSPFIGPLPNPNPETNPSSSIEQRPVDKSTTTA---LPPNQTTIAATSNSRS 912
Query: 483 RPPNK----RIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIA 538
+PP + R N + + + T + SE + + +K ++ A E
Sbjct: 913 QPPKNNHQMKTRSKNNITKPKTKTSLTVALTQPHLSEPNTVTQALKDK-KWRFAMSDEFD 971
Query: 539 QLTKMHTWSEELIDATLIPKQRIINSMFIFTTKR-----DNSKKCRLVARGDQQSL---- 589
+ HTW +L+ P Q ++ ++F K + K RLVA+G Q
Sbjct: 972 AQQRNHTW--DLVPPN--PTQHLVGCRWVFKLKYLPNGLIDKYKARLVAKGFNQQYGVDY 1027
Query: 590 -ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNA 648
ET+ P KATT+ VL +A+ N QLD+++A+L L EE+Y+ PP
Sbjct: 1028 AETFSPVIKATTIR-----VVLDVAVKKNWPLKQLDVNNAFLQGTLTEEVYMAQPPGFVD 1082
Query: 649 RNK---VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCL 705
+++ V +L K++YGLKQ+ W +KQ L+ G + +F L+ L
Sbjct: 1083 KDRPSHVCRLRKAIYGLKQAPRAWYMELKQHLL-NIGFVNSLADTSLFIYSHGTTLLYLL 1141
Query: 706 -FVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEY 764
+VDD++V G + + + +S L++RF K D + + LG+E +
Sbjct: 1142 VYVDDIIVTGSDHKSVSAVLSSLAERFSIK----------DPTDLHYFLGIEAT-RTNTG 1190
Query: 765 MKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRL 824
+ +K + D L + L + P +P P + G L D +Y+ V LQ L
Sbjct: 1191 LHLMQRKYMTDLLAKHNM-LDAKPVATPLPTSPKLTLHGGTKLN-DASEYRSVVGSLQYL 1248
Query: 825 VGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPK 884
R +I + VN L+Q P++ A ++ +YL T + S P
Sbjct: 1249 AFT--------RPDIAFAVNRLSQFMHQPTSDHWQAAKRVLRYLAGTTTHGIFLNSSSPI 1300
Query: 885 NNEITAISDAAFAGNN-DFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCV 943
+ + A SDA +AG++ D+ S + + I+ S K + SSTE+E +++N
Sbjct: 1301 H--LHAFSDADWAGDSADYVSTNAYVIYLGRNPISWSSKKQRGVSRSSTESEYRAVANAA 1358
Query: 944 TYLRGI-EILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNE 1002
+ +R + +L + + + D+ A I + KH +R
Sbjct: 1359 SEIRWLCSLLTELHIRLPHGPTIFCDNIGATYICANPVFHSRM-KHIALDYHFVRGMIQS 1417
Query: 1003 LGLVLEYIPTKENTADILTKPLSMKLF 1029
L + ++ T + AD LTK LS F
Sbjct: 1418 RALRVSHVSTNDQLADALTKSLSRPHF 1444
>At1g58889 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1466
Score = 121 bits (304), Expect = 5e-27
Identities = 171/694 (24%), Positives = 285/694 (40%), Gaps = 103/694 (14%)
Query: 381 DDTINDKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHPTLEEVFESIERDPFN 440
D + + S P + GP+ TT T T+ H + + + +P N
Sbjct: 818 DSSFSSSFPSSPEPTAPRQNGPQPTTQP--------TQTQTQTHSSQN----TSQNNPTN 865
Query: 441 LTSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEH 500
+ + +S +T +S S SS ++ PP+ I + I +
Sbjct: 866 ESPSQLAQSLSTPAQSSSSS--------PSPTTSASSSSTSPTPPSILIHPPPPLAQIVN 917
Query: 501 TKGIMQMNT--------------SINYSEAISRNRNENEKLAFQ--------NAYKKEIA 538
+NT + YS A+S + A Q NA EI
Sbjct: 918 NNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEIN 977
Query: 539 QLTKMHTWSEELIDATLIPKQ----RIINSMFIFTTKRD-----NSKKCRLVARGDQQS- 588
HTW L+P I+ +IFT K + N K R VA+G Q
Sbjct: 978 AQIGNHTWD-------LVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARFVAKGYNQRP 1030
Query: 589 ----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPP 644
ET+ P K+T++ VL +A+D + QLD+++A+L L +++Y+ PP
Sbjct: 1031 GLDYAETFSPVIKSTSIR-----IVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPP 1085
Query: 645 ---HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKL 701
+ N V KL K+LYGLKQ+ W ++ +L+ G + +F + +
Sbjct: 1086 GFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLL-TIGFVNSVSDTSLFVLQRGKSI 1144
Query: 702 VVCL-FVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYK 760
V L +VDD+L+ G + + + LS+RF K +H E + LG+E + +
Sbjct: 1145 VYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVK-----DHEE-----LHYFLGIEAK-R 1193
Query: 761 KGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKH 820
+ ++ + D L + + + P + P + SG LT D +Y+ V
Sbjct: 1194 VPTGLHLSQRRYILDLLARTNM-ITAKPVTTPMAPSPKLSLYSGTKLT-DPTEYRGIVGS 1251
Query: 821 LQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKY 880
LQ L R +I Y VN L+Q P+ + L ++ +YL T + + K
Sbjct: 1252 LQYLAFT--------RPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLK- 1302
Query: 881 SGPKNNEIT--AISDAAFAGN-NDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIY 937
K N ++ A SDA +AG+ +D+ S +G + I+ S K K SSTEAE
Sbjct: 1303 ---KGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1359
Query: 938 SISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRI 996
S++N + ++ I L+ +L + + D+ A + + KH I
Sbjct: 1360 SVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRM-KHIAIDYHFI 1418
Query: 997 RDECNELGLVLEYIPTKENTADILTKPLSMKLFK 1030
R++ L + ++ T + AD LTKPLS F+
Sbjct: 1419 RNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQ 1452
>At2g13940 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1501
Score = 120 bits (301), Expect = 1e-26
Identities = 137/518 (26%), Positives = 232/518 (44%), Gaps = 47/518 (9%)
Query: 529 FQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNSK-----KCRLVAR 583
+ +A E+ L TW +++D L P + I S ++F TK ++ K RLV +
Sbjct: 1004 WNDAMFTEVDALEINKTW--DIVD--LPPGKVAIGSQWVFKTKYNSDGTVERYKARLVVQ 1059
Query: 584 GDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEEL 638
G++Q ET+ P + TTV T+L + +Q+D+ +A+L+ DL+EE+
Sbjct: 1060 GNKQVEGEDYKETFAPVVRMTTVR-----TLLRNVAANQWEVYQMDVHNAFLHGDLEEEV 1114
Query: 639 YIRAPP--HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFT-A 695
Y++ PP + +KV +L KSLYGLKQ+ W + L+ G ++ +F+
Sbjct: 1115 YMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLL-RFGFVQSYEDYSLFSYT 1173
Query: 696 KEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGV 755
+ ++L V ++VDD+L+ G + + +F LS+ F K + G +Y LG+
Sbjct: 1174 RNNIELRVLIYVDDLLICGNDGYMLQKFKDYLSRCFSMK---------DLGKLKY-FLGI 1223
Query: 756 ELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYK 815
E+ + E + +K D + G L S P + L DD
Sbjct: 1224 EVS-RGPEGIFLSQRKYALDVIADSG-NLGSRPAHTP--------LEQNHHLASDDGPLL 1273
Query: 816 DKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKK 875
K +RLVG Y+ H R E+ Y V++LAQ P D A ++ +YL + +
Sbjct: 1274 SDPKPYRRLVGRLLYLLHT-RPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQG 1332
Query: 876 LIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAE 935
++ E+ SD +S S + L G I+ K+ K SS EAE
Sbjct: 1333 ILLNADPDLTLEVYCDSDWQSCPLTR-RSISAYVVLLGGSPISWKTKKQDTVSHSSAEAE 1391
Query: 936 IYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAM 994
++S + ++ + L+ +L + + +L DS+ A+ I E KH S
Sbjct: 1392 YRAMSYALKEIKWLRKLLKELGIEQSTPARLYCDSKAAIHIAANPVFHE-RTKHIESDCH 1450
Query: 995 RIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
+RD + + +++ T E AD+ TK L F L
Sbjct: 1451 SVRDAVRDGIITTQHVRTTEQLADVFTKALGRNQFLYL 1488
>At1g56675 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1486
Score = 120 bits (300), Expect = 1e-26
Identities = 156/589 (26%), Positives = 253/589 (42%), Gaps = 82/589 (13%)
Query: 481 PARPPNKRIRRVNYVHAIEHT-----------KGIMQMNTSINYSEAI------SRNRNE 523
P RPP ++ +YV + H I S NY I + RN
Sbjct: 924 PKRPP---VKLADYVTTLLHQPFPSATPYPLDNYISSSRFSDNYQAYILAITSGNEPRNY 980
Query: 524 NEKLA---FQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNS----- 575
NE + ++ A EI L + TW+ E L P ++ + ++F K +
Sbjct: 981 NEAMLDDHWKGAVSHEIGSLENLGTWTVE----DLPPGKKALGCKWVFRLKYKSDGTLER 1036
Query: 576 KKCRLVARGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYL 630
K RLV G+ Q+ ET+ P K TV V +LD + Q+D+ +A+L
Sbjct: 1037 HKARLVVLGNNQTEGLDYTETFAPVAKMVTVRAFLQQVV---SLDWEV--HQMDVHNAFL 1091
Query: 631 YADLKEELYIRAPPHMNA--RNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIED-R 687
+ DL EE+Y++ PP + KV +L KSLYGLKQ+ W A + L + G I+D
Sbjct: 1092 HGDLDEEVYMQFPPGFRTGDKTKVCRLRKSLYGLKQAPRCWFAKLTSAL-KNYGFIQDIS 1150
Query: 688 FWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGV 747
+ K ++L V ++VDD+++ G I EF LS F + ++ G+
Sbjct: 1151 DYSLFIFHKNGVRLHVLVYVDDLIITGTTIAVITEFKHYLSSCF---------YMKDLGI 1201
Query: 748 NEYDILGVEL-EYKKGEYM---KFGMQKSLEDKLPHLGVPLYSHP--RQRKVPGCPGDYI 801
Y LG+E+ +G Y+ K+ + E L LGV S P + K+ G+
Sbjct: 1202 LRY-FLGIEVARSPEGIYLCQRKYALDIITETGL--LGVKPASFPLDQNHKLAFATGE-- 1256
Query: 802 SSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRA 861
T+DD +RLVG Y+ R E+ Y ++IL+Q P + A
Sbjct: 1257 ------TIDDP------LRYRRLVGRIIYLA-TTRPELSYVIHILSQFMHNPKPAHWEAA 1303
Query: 862 AQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKS 921
++ +YL + + ++ + + P SD ++D +S +G G ++ K+
Sbjct: 1304 LRVVRYLKSSPGQGILLRANTPLVLSAWCDSDFGACPHSD-RSLTGWFIQLGGSPLSWKT 1362
Query: 922 SKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKE 980
K + SS EAE +++ V+ + I L+ L + + L +DS A+++
Sbjct: 1363 QKQNVVSRSSAEAEYRAMAETVSEIIWIRELLPALGIPCTAPTTLHSDSLSAISLAANPV 1422
Query: 981 DAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLF 1029
KH IRDE + +++ T ADILTK L K F
Sbjct: 1423 -YHARTKHVRRDVHFIRDELVNGTIATKHVSTTSQLADILTKALGRKEF 1470
>At2g23330 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1496
Score = 119 bits (299), Expect = 2e-26
Identities = 145/519 (27%), Positives = 240/519 (45%), Gaps = 55/519 (10%)
Query: 532 AYKKEIAQLTKMHTWSEELIDATLIPK-QRIINSMFIFTTKRDNS-----KKCRLVARGD 585
A KEI L HTW D T +P ++ I+S +++ K ++ K RLV G+
Sbjct: 1002 AMSKEIDALEANHTW-----DITDLPHGKKAISSKWVYKLKYNSDGTLERHKARLVVMGN 1056
Query: 586 QQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYI 640
Q ET+ P K TTV T+LA+A + Q+D+ +A+L+ DL+EE+Y+
Sbjct: 1057 HQKEGVDFKETFAPVAKLTTVR-----TILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYM 1111
Query: 641 RAPPHMNAR--NKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEP 698
R PP +KV +L KSLYGLKQ+ W + + L G + +F+ K
Sbjct: 1112 RLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTAL-RNIGFTQSYEDYSLFSLKNG 1170
Query: 699 LKLV-VCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVEL 757
++ V ++VDD++V G N + I F S+L K F H ++ G +Y LG+E+
Sbjct: 1171 DTIIHVLVYVDDLIVAGNNLDAIDRFKSQLHKCF---------HMKDLGKLKY-FLGLEV 1220
Query: 758 EYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISS--GEDLTLDDQDYK 815
+ + +K D + G+ L P VP ++S G T +Q
Sbjct: 1221 S-RGPDGFCLSQRKYALDIVKETGL-LGCKP--SAVPIALNHKLASITGPVFTNPEQ--- 1273
Query: 816 DKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKK 875
+RLVG Y+ R ++ Y V+IL+Q P + A +L +YL + +
Sbjct: 1274 -----YRRLVGRFIYLTIT-RPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQG 1327
Query: 876 LIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKT-IAAKSSKIKLTCVSSTEA 934
+ + + I A D+ + + A ++ G + I+ K+ K SS EA
Sbjct: 1328 IFLR--SDSSLIINAYCDSDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEA 1385
Query: 935 EIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRA 993
E +++ + L+ ++ L+ L ++ S +KL DS+ A+ I E KH S
Sbjct: 1386 EYRAMAYTLKELKWLKALLKDLGVHHSSPMKLHCDSEAAIHIAANPVFHE-RTKHIESDC 1444
Query: 994 MRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
++RD + + E+I T++ AD+LTK L F+ L
Sbjct: 1445 HKVRDAVLDKLITTEHIYTEDQVADLLTKSLPRPTFERL 1483
>At4g02960 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1456
Score = 119 bits (298), Expect = 2e-26
Identities = 149/595 (25%), Positives = 254/595 (42%), Gaps = 67/595 (11%)
Query: 469 EEQEQECSSDNSPARPP----------NKRIRRVNYVHAIEHTKGIMQMNTSINYSEAIS 518
E SS ++P PP N + + A GI + N +Y+ +++
Sbjct: 875 EPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLA 934
Query: 519 RNRNENEKLA------FQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKR 572
N + ++ A EI HTW +L+ P I+ +IFT K
Sbjct: 935 ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTW--DLVPPPP-PSVTIVGCRWIFTKKF 991
Query: 573 D-----NSKKCRLVARGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQ 622
+ N K RLVA+G Q ET+ P K+T++ VL +A+D + Q
Sbjct: 992 NSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR-----IVLGVAVDRSWPIRQ 1046
Query: 623 LDISSAYLYADLKEELYIRAPPHMNARNK---VLKLNKSLYGLKQSGANWCALIKQFLVE 679
LD+++A+L L +E+Y+ PP +++ V +L K++YGLKQ+ W ++ +L+
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLL- 1105
Query: 680 ECGLIEDRFWKCVFTAKEPLKLVVCL-FVDDMLVVGRNDEHIIEFISKLSKRFDTKVVND 738
G + +F + ++ L +VDD+L+ G + + + LS+RF K D
Sbjct: 1106 TVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHED 1165
Query: 739 GNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPG 798
++ LG+E + + + + ++ D L + L + P + P
Sbjct: 1166 LHY----------FLGIEAK-RVPQGLHLSQRRYTLDLLARTNM-LTAKPVATPMATSPK 1213
Query: 799 DYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVL 858
+ SG L D +Y+ V LQ L R ++ Y VN L+Q+ P+
Sbjct: 1214 LTLHSGTKLP-DPTEYRGIVGSLQYLAFT--------RPDLSYAVNRLSQYMHMPTDDHW 1264
Query: 859 DRAAQLCQYLWDTRDKKLIWKYSGPKNNEIT--AISDAAFAGN-NDFKSQSGALYLWNGK 915
+ ++ +YL T D + K K N ++ A SDA +AG+ +D+ S +G +
Sbjct: 1265 NALKRVLRYLAGTPDHGIFLK----KGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHH 1320
Query: 916 TIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAI 975
I+ S K K SSTEAE S++N + L+ I L+ +L S +
Sbjct: 1321 PISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATY 1380
Query: 976 IKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFK 1030
+ KH IR++ L + ++ T + AD LTKPLS F+
Sbjct: 1381 LCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQ 1435
>At4g03810 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 964
Score = 117 bits (292), Expect = 1e-25
Identities = 139/548 (25%), Positives = 250/548 (45%), Gaps = 55/548 (10%)
Query: 499 EHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPK 558
+H +++ + +Y EA+ ++ + A K E+ +++ W+ L+D L
Sbjct: 431 DHALFMIESDEPTSYEEALMGPDSDK----WLEAAKSEMESMSQNKVWT--LVD--LPDG 482
Query: 559 QRIINSMFIFTTKRDNSK-----KCRLVARGDQQSLETYDPDQKATTVHHL-ALMTVLAM 612
+ I +IF K D K LVA+G +Q + D D+ + V L ++ +LA
Sbjct: 483 VKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQ-VHGIDYDETYSPVAMLKSIRILLAT 541
Query: 613 ALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMN---ARNKVLKLNKSLYGLKQSGANW 669
A ++ +Q+D+ +A+L +L+E +Y+ P A KV KL++S+YGLKQ+ +W
Sbjct: 542 AAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLHRSIYGLKQASRSW 601
Query: 670 CALIKQFLVEECGLIEDRFWKCVF--TAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISK- 726
+ ++E I + CV+ T+ + +V L+VDD+L++G ND +++ +
Sbjct: 602 NLRFNE-AIKEFDFIRNEEEPCVYKKTSGSAVAFLV-LYVDDILLLG-NDIPLLQSVKTW 658
Query: 727 LSKRFDTKVVND-----GNHREEDGVNEYDILGVELE-YKKGEYMKFGMQKSLEDKLPHL 780
L F K + + G D +N+ I+G+ + Y +F M S + +P
Sbjct: 659 LGSCFSMKDMGEAAYILGIRIYRDRLNK--IIGLSQDTYIDKVLHRFNMHDSKKGFIP-- 714
Query: 781 GVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEIL 840
SH CP T D+++ K+ + +G Y R ++
Sbjct: 715 ----MSHGITLSKTQCPS---------THDERERMSKIPYASA-IGSIMYAMLYTRPDVA 760
Query: 841 YYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAF-AGN 899
+++ +++Q P + +YL T+DK L+ Y G + ++ +DA+F
Sbjct: 761 CALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLV--YGGSEELVVSGYTDASFQTDK 818
Query: 900 NDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNT 959
+DF+SQSG + NG ++ KS+K S+TEAE + S + I + +L
Sbjct: 819 DDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVV 878
Query: 960 KSI---IKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENT 1016
SI I L D+ A+A K + + KH R IR+ + + + + T N
Sbjct: 879 PSISGPIDLYCDNNGAIAQAKEPKSHQ-KSKHIQRRYHLIREIIDRGDVKISRVSTDANV 937
Query: 1017 ADILTKPL 1024
AD TKPL
Sbjct: 938 ADHFTKPL 945
>At4g16870 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1474
Score = 114 bits (284), Expect = 1e-24
Identities = 133/516 (25%), Positives = 221/516 (42%), Gaps = 53/516 (10%)
Query: 532 AYKKEIAQLTKMHTWSEELIDATLIP--KQRIINSMFIFTTK-----RDNSKKCRLVARG 584
A E + HTW L+P Q ++ ++F K + K RLVA+G
Sbjct: 981 AMSDEFDAQQRNHTWD-------LVPHESQLLVGCKWVFKLKYLPNGAIDKYKARLVAKG 1033
Query: 585 DQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELY 639
Q ET+ P K+TT+ VL +A+ + QLD+++A+L L EE+Y
Sbjct: 1034 FNQQYGVDYAETFSPVIKSTTIR-----LVLDVAVKKDWEIKQLDVNNAFLQGTLTEEVY 1088
Query: 640 IRAPPHMNARNK---VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAK 696
+ PP +++ V +L K++YGLKQ+ W +KQ L G + +F
Sbjct: 1089 MAQPPGFIDKDRPTHVCRLRKAIYGLKQAPRAWYMELKQHLF-NIGFVNSLSDASLFIYC 1147
Query: 697 EPLKLV-VCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGV 755
V V ++VDD++V G + I ++ L++RF K D + + LG+
Sbjct: 1148 HGTTFVYVLVYVDDIIVTGSDKSSIDAVLTSLAERFSIK----------DPTDLHYFLGI 1197
Query: 756 ELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYK 815
E K + + +K ++D L + + P +P P + G L D +Y+
Sbjct: 1198 EATRTK-QGLHLMQRKYIKDLLAKHNM-ADAKPVLTPLPTSPKLTLHGGTKLN-DASEYR 1254
Query: 816 DKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKK 875
V LQ L R +I Y VN L+Q P+ A ++ +YL T
Sbjct: 1255 SVVGSLQYLAFT--------RPDIAYAVNRLSQLMPQPTEDHWQAAKRVLRYLAGTSTHG 1306
Query: 876 LIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKT-IAAKSSKIKLTCVSSTEA 934
+ + P N + A SDA +AG++D + A ++ GK I+ S K + SSTE+
Sbjct: 1307 IFLDTTSPLN--LHAFSDADWAGDSDDYVSTNAYVIYLGKNPISWSSKKQRGVARSSTES 1364
Query: 935 EIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAM 994
E +++N + ++ + L+ KL I + KH
Sbjct: 1365 EYRAVANAASEVKWLCSLLSKLHIRLPIRPSIFCDNIGATYLCANPVFHSRMKHIAIDYH 1424
Query: 995 RIRDECNELGLVLEYIPTKENTADILTKPLSMKLFK 1030
+R+ L + ++ T++ AD LTKPLS F+
Sbjct: 1425 FVRNMIQSGALRVSHVSTRDQLADALTKPLSRAHFQ 1460
>At4g23160_1 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 597
Score = 110 bits (275), Expect = 1e-23
Identities = 121/439 (27%), Positives = 190/439 (42%), Gaps = 60/439 (13%)
Query: 525 EKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNSK-----KCR 579
E L + A EI + HTW TL P ++ I +++ K ++ K R
Sbjct: 94 EFLVWCGAMDDEIGAMETTHTWEI----CTLPPNKKPIGCKWVYKIKYNSDGTIERYKAR 149
Query: 580 LVARGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADL 634
LVA+G Q +ET+ P K T+V +LA++ +N T QLDIS+A+L DL
Sbjct: 150 LVAKGYTQQEGIDFIETFSPVCKLTSVK-----LILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 635 KEELYIRAPPHMNAR-------NKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIE-- 685
EE+Y++ PP AR N V L KS+YGLKQ+ W L+ G ++
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLI-GFGFVQSH 263
Query: 686 -DRFWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREE 744
D + TA L L V ++VDD+++ ND + E S+L F + +
Sbjct: 264 SDHTYFLKITA--TLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLR---------D 312
Query: 745 DGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSG 804
G +Y LG+E+ + + +K D L G + GC +
Sbjct: 313 LGPLKY-FLGLEIA-RSAAGINICQRKYALDLLDETG-----------LLGCKPSSVPMD 359
Query: 805 EDLTLDDQDYKDKV--KHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAA 862
+T D V K +RL+G Y+ R +I + VN L+Q P
Sbjct: 360 PSVTFSAHSGGDFVDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVM 418
Query: 863 QLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKT-IAAKS 921
++ Y+ T + L YS ++ SDA+F D + + ++ G + I+ KS
Sbjct: 419 KILHYIKGTVGQGLF--YSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKS 476
Query: 922 SKIKLTCVSSTEAEIYSIS 940
K ++ SS EAE ++S
Sbjct: 477 KKQQVVSKSSAEAEYRALS 495
>At2g16670 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1333
Score = 109 bits (272), Expect = 3e-23
Identities = 138/530 (26%), Positives = 236/530 (44%), Gaps = 57/530 (10%)
Query: 519 RNRNENEKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNSK-- 576
+ R++ + + + I + HTW+ E L P +R I S +++ K ++
Sbjct: 826 QKRDDTRRFSASHTTYVAIDAQEENHTWTIE----DLPPGKRAIGSQWVYKVKHNSDGSV 881
Query: 577 ---KCRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSA 628
K RLVA G++Q ET+ P K TV L +A+ N Q+D+ +A
Sbjct: 882 ERYKARLVALGNKQKEGEDYGETFAPVAKMATVR-----LFLDVAVKRNWEIHQMDVHNA 936
Query: 629 YLYADLKEELYIRAPPHMNAR--NKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIED 686
+L+ DL+EE+Y++ PP A NKV +L K+LYGLKQ+ W + L + G +
Sbjct: 937 FLHGDLREEVYMKLPPGFEASHPNKVCRLRKALYGLKQAPRCWFEKLTTAL-KRYGFQQS 995
Query: 687 RFWKCVFT-AKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREED 745
+FT K +++ + ++VDD+++ G + +F L+ F H ++
Sbjct: 996 LADYSLFTLVKGSVRIKILIYVDDLIITGNSQRATQQFKEYLASCF---------HMKDL 1046
Query: 746 GVNEYDILGVEL-EYKKGEYM---KFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYI 801
G +Y LG+E+ G Y+ K+ + E L LGV + P ++
Sbjct: 1047 GPLKY-FLGIEVARSTTGIYICQRKYALDIISETGL--LGVKPANFPLEQN-----HKLG 1098
Query: 802 SSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRA 861
S L D Q Y+ RLVG Y+ R ++ + V+ILA+ P A
Sbjct: 1099 LSTSPLLTDPQRYR-------RLVGRLIYLA-VTRLDLAFSVHILARFMQEPREDHWAAA 1150
Query: 862 AQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGN-NDFKSQSGALYLWNGKTIAAK 920
++ +YL + + + SG + +IT D+ +AG+ +S +G + I+ K
Sbjct: 1151 LRVVRYLKADPGQGVFLRRSG--DFQITGWCDSDWAGDPMSRRSVTGYFVQFGDSPISWK 1208
Query: 921 SSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRK 979
+ K SS EAE ++S + L ++ L+ L ++ + + DS+ A+ I
Sbjct: 1209 TKKQDTVSKSSAEAEYRAMSFLASELLWLKQLLFSLGVSHVQPMIMCCDSKSAIYIATNP 1268
Query: 980 EDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLF 1029
E KH +RDE + + ++ T ADI TKPL F
Sbjct: 1269 VFHE-RTKHIEIDYHFVRDEFVKGVITPRHVGTTSQLADIFTKPLGRDCF 1317
>At4g27210 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1318
Score = 108 bits (270), Expect = 4e-23
Identities = 134/517 (25%), Positives = 221/517 (41%), Gaps = 56/517 (10%)
Query: 532 AYKKEIAQLTKMHTWSEELIDATLIPKQ---RIINSMFIFTTKRD-----NSKKCRLVAR 583
A +EI ++ TWS L+P + ++ S ++F TK N K R+VA+
Sbjct: 729 AMTEEIGNCSETQTWS-------LVPYKSDMHVLGSKWVFRTKLHADGTLNKLKARIVAK 781
Query: 584 GDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEEL 638
G Q LETY P + TV L+ LA AL+ ++ Q+D+ +A+L+ DLKE +
Sbjct: 782 GFLQEEGIDYLETYSPVVRTPTVR---LVLHLATALNWDIK--QMDVKNAFLHGDLKETV 836
Query: 639 YIRAPPHMNARNK---VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTA 695
Y+ P +K V L+KS+YGLKQS W FL+E A
Sbjct: 837 YMTQPAGFVDPSKPDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIYA 896
Query: 696 KEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGV 755
+++ L+VDDM++ G + + + ++ L+K F R D + LG+
Sbjct: 897 HNNNLILLLLYVDDMVITGNSSQTLTSLLAALNKEF----------RMTDMGQLHYFLGI 946
Query: 756 ELE-YKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDY 814
+++ + G +M QK ED L + + P +P D + E+L D +
Sbjct: 947 QVQRQQNGLFM--SQQKYAEDLLIAASME-HCTPLPTPLP-VQLDRVPHQEELFSDPTYF 1002
Query: 815 KDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDK 874
+ LQ L R +I + VN + Q P+ ++ +Y+ T
Sbjct: 1003 RSIAGKLQYLT--------LTRPDIQFAVNFVCQKMHQPTISDFHLLKRILRYIKGTITM 1054
Query: 875 KLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCV-SSTE 933
+ YS + A SD+ + + G L + G + + SSK T SSTE
Sbjct: 1055 GI--SYSRDSPTLLQAYSDSDWGNCKQTRRSVGGLCTFMGTNLVSWSSKKHPTVSRSSTE 1112
Query: 934 AEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSR 992
AE S+S+ + + + L+ +L + +L D+ A+ + KH
Sbjct: 1113 AEYKSLSDAASEILWLSTLLRELRIPLPDTPELFCDNLSAV-YLTANPAFHARTKHFDID 1171
Query: 993 AMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLF 1029
+R+ LV+++IP E ADI TK L + F
Sbjct: 1172 FHFVRERVALKALVVKHIPGSEQIADIFTKSLPYEAF 1208
>At2g24660 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1156
Score = 108 bits (269), Expect = 6e-23
Identities = 130/517 (25%), Positives = 222/517 (42%), Gaps = 66/517 (12%)
Query: 529 FQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRD-----NSKKCRLVAR 583
+ +A KE+ L TW +++D L P + I S +++ TK + K RLV +
Sbjct: 651 WNDAMFKEVDALEINKTW--DIVD--LPPGKVAIGSQWVYKTKYNADGSIERYKARLVVQ 706
Query: 584 GDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEEL 638
G++Q ET+ P K TTV T+L + + +Q+D+++A+L+ DL EE+
Sbjct: 707 GNKQVEGEDYNETFAPVVKMTTVR-----TLLRLVAANQWEVYQMDVNNAFLHGDLDEEV 761
Query: 639 YIRAPP--HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFT-A 695
Y++ PP + +KV +L KSLYGLKQ+ W + L+ G ++ F+
Sbjct: 762 YMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALL-RFGFVQGHEDYSFFSYT 820
Query: 696 KEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGV 755
+ ++L V ++VDD+L+ G + + +F L + F K + G +Y LG+
Sbjct: 821 RNGIELRVLVYVDDLLICGNDGYMLQKFKEYLGRCFSMK---------DLGKLKY-FLGI 870
Query: 756 ELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYK 815
E+ + E + +K D + G L P + L DD
Sbjct: 871 EVS-RGSEGIFLSQRKYALDIITDSG-NLGCRPALTP--------LEQNHHLATDDGPLL 920
Query: 816 DKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKK 875
K +RLVG Y+ H R E+ Y V++L+Q P L A ++ ++L + +
Sbjct: 921 ADAKPYRRLVGRLLYLLHT-RPELSYSVHVLSQFMQTPREAHLAAAMRIVRFLKGSPGQG 979
Query: 876 LIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAE 935
++ ++ SD +S S + L G I+ K+ K SS EAE
Sbjct: 980 ILLNADTELQLDVYCDSDFQTCPKTR-RSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAE 1038
Query: 936 IYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMR 995
++S + ++ + L+ +L N + +T KH S
Sbjct: 1039 YRAMSVALREIKWLRKLLKELAN--PVFHERT-------------------KHIESDCHS 1077
Query: 996 IRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
+RD + + ++ T E ADI TK L F L
Sbjct: 1078 VRDAVRDGIITTHHVRTNEQLADIFTKALGRSQFLYL 1114
>At1g62460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1304
Score = 106 bits (264), Expect = 2e-22
Identities = 148/624 (23%), Positives = 263/624 (41%), Gaps = 79/624 (12%)
Query: 442 TSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPARPPNKRIRRV------NYV 495
TS+ +P + E+ + ++ D + E E + +P + N
Sbjct: 628 TSENQPMMNYETEEAVNVNMETSSDEETESNDEFDHEVAPVLNDQNEDNALGQGSLENLH 687
Query: 496 HAIEHTK-GIMQMNTSINYSEAISRNRNENEKL--------AFQNAYKKEIAQLTKMHTW 546
I +K GI + N Y+ +S++ + K + A EI ++ ++TW
Sbjct: 688 PMITRSKDGIQKPNP--RYALIVSKSSFDEPKTITTAMKHPGWNAAVMDEIDRIHMLNTW 745
Query: 547 SEELIDATLIPKQRIINSMFIFTTKRD-----NSKKCRLVARGDQQS-----LETYDPDQ 596
S L+ AT I+ S ++F TK + K RLVA+G Q LET+ P
Sbjct: 746 S--LVPAT--EDMNILTSKWVFKTKLKPDGTIDKLKARLVAKGFDQEEGVDYLETFSPVV 801
Query: 597 KATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHM---NARNKVL 653
+ T+ VL A + QLD+S+A+L+ +L+E +++ P N N V
Sbjct: 802 RTATIR-----LVLDTATANEWPLKQLDVSNAFLHGELQEPVFMFQPSGFVDPNKPNHVC 856
Query: 654 KLNKSLYGLKQSGANWCALIKQFLVE---ECGLIEDRFWKCVFTAKEPLKLVVCLFVDDM 710
+L K+LYGLKQ+ W FL++ EC + + C + L++ L+VDD+
Sbjct: 857 RLTKALYGLKQAPRAWFDTFSNFLLDFGFECSTSDPSLFVC---HQNGQSLILLLYVDDI 913
Query: 711 LVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELE-YKKGEYMKFGM 769
L+ G + + + + L+ RF K + + LG+E+E Y G ++
Sbjct: 914 LLTGSDQLLMDKLLQALNNRFSMKDLGPPRY----------FLGIEIESYNNGLFLH--- 960
Query: 770 QKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLAS 829
Q + + H +P +P EDL + + ++ + + L G
Sbjct: 961 QHAYASDILHQAGMTECNPMPTPLP-------QHLEDL---NSEPFEEPTYFRSLAGKLQ 1010
Query: 830 YVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKL-IWKYSGPKNNEI 888
Y+ R +I Y VN + Q P+ ++ +Y+ T + L I K+ P +
Sbjct: 1011 YLTIT-RPDIQYAVNFICQRMHAPTNSDFGLLKRILRYVKGTINMGLPIRKHHNP---VL 1066
Query: 889 TAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCV-SSTEAEIYSISNCVTYLR 947
+ D+ +AG D + + + G T+ + S+K + T SSTEAE ++S+ +
Sbjct: 1067 SGFCDSDYAGCKDTRRSTTGFCILLGSTLISWSAKRQPTISHSSTEAEYRALSDTAREIT 1126
Query: 948 GIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLV 1006
I L+ L ++ ++ D+ A+ + KH IR+ LGL+
Sbjct: 1127 WISSLLRDLGISQHQPTRVFCDNLSAV-YLSANPALHKRSKHFDKDFHYIRERV-ALGLI 1184
Query: 1007 -LEYIPTKENTADILTKPLSMKLF 1029
++IP AD+ TK L + F
Sbjct: 1185 ETQHIPATIQLADVFTKSLPRRPF 1208
>At4g17450 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1433
Score = 104 bits (259), Expect = 8e-22
Identities = 131/543 (24%), Positives = 231/543 (42%), Gaps = 56/543 (10%)
Query: 512 NYSEAISRNRNENEK--LAFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFT 569
N + A+ R K A+ +A K+EI + + +TWS +L P ++ I ++FT
Sbjct: 910 NITNAVIPQRYSEAKDFKAWCDAMKEEIGAMVRTNTWSV----VSLPPNKKAIGCKWVFT 965
Query: 570 TKRD-----NSKKCRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLT 619
K + K RLVA+G Q ET+ P K T+V + L+ A +
Sbjct: 966 IKHNADGSIERYKARLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLL-----AAKMKWS 1020
Query: 620 AFQLDISSAYLYADLKEELYIRAPP-------HMNARNKVLKLNKSLYGLKQSGANWCAL 672
QLDIS+A+L DL EE+Y++ PP + + +L+KS+YGLKQ+ W
Sbjct: 1021 VHQLDISNAFLNGDLDEEIYMKIPPGYADLVGEALPPHAICRLHKSIYGLKQASRQWYLK 1080
Query: 673 IKQFLVEECGLIEDRFWKCVFTA-KEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRF 731
+ L + G + +F + + V ++VDD+++V +D+ + +F ++L F
Sbjct: 1081 LSNTL-KGMGFQKSNADHTLFIKYANGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYF 1139
Query: 732 DTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQR 791
+ + G +Y LG+E+ + + + +K + + L G + +
Sbjct: 1140 KLR---------DLGAAKY-FLGIEIA-RSEKGISICQRKYILELLSTTG---FLGSKPS 1185
Query: 792 KVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQL 851
+P P ++ + + L D ++LVG Y+ R +I Y VN L Q
Sbjct: 1186 SIPLDPSVKLNKEDGVPLTDS------TSYRKLVGKLMYL-QITRPDIAYAVNTLCQFSH 1238
Query: 852 YPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYL 911
P++ L ++ +YL T + L YS ++ +D+ F D + A +
Sbjct: 1239 APTSVHLSAVHKVLRYLKGTVGQGLF--YSADDKFDLRGYTDSDFGSCTDSRRCVAAYCM 1296
Query: 912 WNGKTIAA-KSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDS 969
+ G + + KS K +S+ EAE ++S + + L D + L D+
Sbjct: 1297 FIGDYLVSWKSKKQDTVSMSTAEAEFRAMSQGTKEMIWLSRLFDDFKVPFIPPAYLYCDN 1356
Query: 970 QPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLF 1029
A+ I+ E K + R+ L ++ T E AD LTK + F
Sbjct: 1357 TAALHIVNNSVFHE-RTKFVELDCYKTREAVESGFLKTMFVETGEQVADPLTKAIHPAQF 1415
Query: 1030 KLL 1032
L
Sbjct: 1416 HKL 1418
>At2g16000 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1454
Score = 104 bits (259), Expect = 8e-22
Identities = 130/552 (23%), Positives = 233/552 (41%), Gaps = 76/552 (13%)
Query: 500 HTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPK- 558
+ I ++ NY+EA + + A EI + K +TW + T +PK
Sbjct: 930 YINNITKIPIPTNYAEA-------QDTKEWCEAVDAEIGAMEKTNTW-----EITTLPKG 977
Query: 559 QRIINSMFIFTTK-----RDNSKKCRLVARGDQQS-----LETYDPDQKATTVHHLALMT 608
++ + ++FT K K RLVA+G Q +T+ P K TT+ L
Sbjct: 978 KKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLL---- 1033
Query: 609 VLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNAR-------NKVLKLNKSLYG 661
L ++ QLD+S+A+L +L+EE++++ P R N VL+L +S+YG
Sbjct: 1034 -LKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAERKGIVLPSNVVLRLKRSIYG 1092
Query: 662 LKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCL-FVDDMLVVGRNDEHI 720
LKQ+ W L+ G + +F + V+ L +VDD+++ ++
Sbjct: 1093 LKQASRQWFKKFSSSLL-SLGFKKTHGDHTLFLKMYDGEFVIVLVYVDDIVIASTSEAAA 1151
Query: 721 IEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVE-------LEYKKGEYMKFGMQKSL 773
+ +L +RF + + D + LG+E + + +Y +Q +
Sbjct: 1152 AQLTEELDQRFKLRDLGDLKY----------FLGLEVARTTAGISICQRKYALELLQSTG 1201
Query: 774 EDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGH 833
+ VP+ + + RK DD D + ++ +R+VG Y+
Sbjct: 1202 MLACKPVSVPMIPNLKMRK-----------------DDGDLIEDIEQYRRIVGKLMYLTI 1244
Query: 834 KFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISD 893
R +I + VN L Q P L A ++ QY+ T + L YS + + +D
Sbjct: 1245 T-RPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLF--YSASSDLTLKGFAD 1301
Query: 894 AAFAGNNDFKSQSGALYLWNGKT-IAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEIL 952
+ +A D + + + ++ G + I+ +S K SS EAE +++ + + L
Sbjct: 1302 SDWASCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTL 1361
Query: 953 VDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPT 1012
+ L + + L +DS A+ I E KH +R+ + L L ++ T
Sbjct: 1362 LVSLQASPPVPILYSDSTAAIYIATNPVFHE-RTKHIKLDCHTVRERLDNGELKLLHVRT 1420
Query: 1013 KENTADILTKPL 1024
++ ADILTKPL
Sbjct: 1421 EDQVADILTKPL 1432
>At4g10690 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1515
Score = 103 bits (258), Expect = 1e-21
Identities = 125/518 (24%), Positives = 222/518 (42%), Gaps = 58/518 (11%)
Query: 531 NAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNSK-----KCRLVARGD 585
NA +E+ + + TW +L+ ++ R++ ++F TK ++ K RLVARG
Sbjct: 934 NAMGEEMGTMHETDTW--DLVPPEMV--DRLLGCKWVFKTKLNSDGSLDRLKARLVARGY 989
Query: 586 QQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYI 640
+Q +ETY P ++ TV ++L +A + + QLD+ +A+L+ +LKE +++
Sbjct: 990 EQEEGVDYVETYSPVVRSATVR-----SILHVATINKWSLKQLDVKNAFLHDELKETVFM 1044
Query: 641 RAPPHMNARNK---VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKE 697
PP ++ V KL K++Y LKQ+ W +L++ + K
Sbjct: 1045 TQPPGFEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFVYLKG 1104
Query: 698 PLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVEL 757
+ + L+VDDM++ G ND + + ++ LS F K + G Y LG++
Sbjct: 1105 RDVMFLLLYVDDMILTGNNDVLLQQLLNILSTEFRMK---------DMGALHY-FLGIQA 1154
Query: 758 EYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDK 817
Y + + +K D L + G+ D S L LD +K
Sbjct: 1155 HY-HNDGLFLSQEKYTSDLLVNAGM---------------SDCSSMPTPLQLDLLQGNNK 1198
Query: 818 ----VKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRD 873
+ +RL G Y+ R +I + VN + Q P+ ++ YL T
Sbjct: 1199 PFPEPTYFRRLAGKLQYL-TLTRPDIQFAVNFVCQKMHAPTMSDFHLLKRILHYLKGTMT 1257
Query: 874 KKLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLT-CVSST 932
+ S ++ + SD+ +AG D + +G + G I + S+K T SST
Sbjct: 1258 MGI--NLSSNTDSVLRCYSDSDWAGCKDTRRSTGGFCTFLGYNIISWSAKRHPTVSKSST 1315
Query: 933 EAEIYSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGS 991
EAE ++S + + I L+ ++ L + I ++ D+ A+ + KH
Sbjct: 1316 EAEYRTLSFAASEVSWIGFLLQEIGLPQQQIPEMYCDNLSAV-YLSANPALHSRSKHFQV 1374
Query: 992 RAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLF 1029
+R+ L +++IP + ADI TK L F
Sbjct: 1375 DYYYVRERVALGALTVKHIPASQQLADIFTKSLPQAPF 1412
>At1g33817 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 503
Score = 103 bits (257), Expect = 1e-21
Identities = 120/470 (25%), Positives = 205/470 (43%), Gaps = 50/470 (10%)
Query: 577 KCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKE 636
K RLVA+G Q + A + ++ +A H LD+ +A+L+ +LKE
Sbjct: 37 KARLVAKGYVQQYGVDFEEVFAPVARIETIRLLINLAASHGWEIHHLDVKTAFLHGELKE 96
Query: 637 ELYIRAPP---HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVF 693
+Y+ P + +KV KLNK+LYGL+Q+ W + LVE +F KC
Sbjct: 97 TVYVYQPEGFERKGSEDKVYKLNKALYGLRQAPRAWNNKLNHILVEL------QFLKC-- 148
Query: 694 TAKEPL---------KLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREE 744
+KEP L++ ++VDD+ V G N + I +F ++S +F+ + +
Sbjct: 149 -SKEPSVYRKEVSKDLLLIAIYVDDLFVTGTNLDIINKFKEEMSSKFEMSNLGKLTY--- 204
Query: 745 DGVNEYDILGVE-LEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISS 803
LG+E +++K G + + L G+ + G + +
Sbjct: 205 -------YLGIEVIQHKDG--IALNQNRYALKILEEAGMIDCNRVHTPMEMGL--KFSKA 253
Query: 804 GEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQ 863
E+ +D Y+ + VG Y+ H R ++ Y V +L+++ P Q
Sbjct: 254 EEEEEVDATAYR-------KNVGCLRYLLHT-RPDLSYCVGVLSRYMQSPRVSHAAAMKQ 305
Query: 864 LCQYLWDTRDKKLIWKYSGPKNNEITAISDAAF-AGNNDFKSQSGALYLWNGKTIAAKSS 922
+YL T LI+K K ++ SD++ +D +S +G ++ I SS
Sbjct: 306 CLRYLKGTTSLGLIFKRC-EKIPKLVGYSDSSHNVDPDDGRSTAGHVFYLGESPITWCSS 364
Query: 923 KIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTK-SIIKLKTDSQPAMAIIKRKED 981
K + +SS EAE + + ++ L+ ++ T + + D++ A+A+ K
Sbjct: 365 KQDVVALSSCEAEFMAGTEAAKQAIWLQELLSEITGTVCGKVTILIDNKSAIALTKNPV- 423
Query: 982 AEFLKKHTGSRAMRIRDECNELGLV-LEYIPTKENTADILTKPLSMKLFK 1030
KH R IR EC E G + +E++P E ADILTK L FK
Sbjct: 424 FHGRSKHIHRRYHFIR-ECVETGQIEVEHVPGNEQKADILTKALGRIKFK 472
>At1g70010 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1315
Score = 103 bits (256), Expect = 2e-21
Identities = 142/529 (26%), Positives = 217/529 (40%), Gaps = 61/529 (11%)
Query: 520 NRNENEKL-AFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNSK-- 576
N E EKL +++A E L HTW +L +R I +IF K ++
Sbjct: 803 NYTEAEKLQVWRDAMGAEFDFLEGTHTWEV----CSLPADKRCIGCRWIFKIKYNSDGSV 858
Query: 577 ---KCRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSA 628
K RLVA+G Q ET+ P K +V L L +A L+ QLDIS+A
Sbjct: 859 ERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLL-----LGVAARFKLSLTQLDISNA 913
Query: 629 YLYADLKEELYIRAPPHMNAR-------NKVLKLNKSLYGLKQSGANWCALIKQFLVEEC 681
+L DL EE+Y+R P +R N V +L KSLYGLKQ+ W L+
Sbjct: 914 FLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFSSTLL-GL 972
Query: 682 GLIEDRF-WKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGN 740
G I+ C + + L V +++DD+++ ND + S++ F + + +
Sbjct: 973 GFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLRDLGELK 1032
Query: 741 HREEDGVNEYDILGVEL-EYKKGEYM---KFGMQKSLEDKLPHLGVPLYSHPRQRKVPGC 796
+ LG+E+ KG ++ K+ + L D+ LG S P P
Sbjct: 1033 Y----------FLGLEIVRSDKGIHISQRKYAL--DLLDETGQLGCKPSSIPMD---PSM 1077
Query: 797 PGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAK 856
+ S G+ + +V +RL+G Y+ + R +I + VN LAQ + P
Sbjct: 1078 VFAHDSGGDFV---------EVGPYRRLIGRLMYL-NITRPDITFAVNKLAQFSMAPRKA 1127
Query: 857 VLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNNDF-KSQSGALYLWNGK 915
L ++ QY+ T + L YS ++ ++A + D +S SG
Sbjct: 1128 HLQAVYKILQYIKGTIGQGLF--YSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDS 1185
Query: 916 TIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAI 975
I KS K + SS EAE S+S L + + +L S L A
Sbjct: 1186 LICWKSRKQDVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIH 1245
Query: 976 IKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPL 1024
I KH S +R+ + L +I T+ AD TKPL
Sbjct: 1246 IANNHVFHERTKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPL 1294
>At2g19840 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1137
Score = 102 bits (253), Expect = 4e-21
Identities = 122/511 (23%), Positives = 214/511 (41%), Gaps = 48/511 (9%)
Query: 532 AYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTK------RDNSKKCRLVARGD 585
A +EI L K +TW L++ Q+ I ++F K K RLV +G
Sbjct: 652 AVDEEIESLLKNNTWV--LVNRDQF--QKPIGCKWVFKRKSGIVGVEKPRFKARLVVKGY 707
Query: 586 QQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPP- 644
Q + + V H+++ +L+M ++ Q+D+ +A+L+ L E +YI P
Sbjct: 708 SQKEGIDYQEIFSPVVKHVSIRLLLSMVTHCDMELQQMDVKTAFLHGYLDETIYIEQPEG 767
Query: 645 --HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVF--TAKEPLK 700
H +KV L +SLYGL+QS W +F+ ++ G ++ CV+ +
Sbjct: 768 YVHKRYPDKVCLLKRSLYGLRQSPRQWNNRFNEFM-QKIGYERSKYDSCVYFKELQSGEY 826
Query: 701 LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVEL-EY 759
+ + L+VDD+L+ R+ + + + L+ F+ K + D ILG+E+
Sbjct: 827 IYLLLYVDDILIASRDKRTVCDLKALLNSEFEMKDLGDAK----------KILGMEIVRD 876
Query: 760 KKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVK 819
+K M + L L + G+ + P + D + Q +
Sbjct: 877 RKAGTMSISQEGYLLKVLGNFGM---DQAKPVFTPMGAHFKLKPATDEEVMRQSEVMRAV 933
Query: 820 HLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWK 879
Q VG Y R ++ + V ++ + P + + +Y+ + D+KL +K
Sbjct: 934 PYQSAVGSLMYSMIGTRPDLAHSVGLVCRFMSKPLKEHWQAVKWILRYIRGSIDRKLCYK 993
Query: 880 YSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSI 939
G E SD A A +S SG +K+ +SSTEAE ++
Sbjct: 994 NEGELILEGYCDSDYA-ADKEGRRSTSG----------------VKVVALSSTEAEYMAL 1036
Query: 940 SNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDE 999
++ ++ V +L + + + DSQ A+A+ K E KH + IRD
Sbjct: 1037 TDGAKEAIWLKGHVSELGFVQKTVNIHCDSQSAIALAKNAVYHE-RTKHIDVKYHFIRDL 1095
Query: 1000 CNELGLVLEYIPTKENTADILTKPLSMKLFK 1030
N + + I T++N ADI TK L + F+
Sbjct: 1096 VNNGEVQVLKIDTEDNPADIFTKVLPVSKFQ 1126
>At4g22040 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1120
Score = 97.1 bits (240), Expect = 1e-19
Identities = 126/515 (24%), Positives = 225/515 (43%), Gaps = 49/515 (9%)
Query: 528 AFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNSK-----KCRLVA 582
A++ A EI L T+S L P +R + + +++ K + K RLV
Sbjct: 622 AWREAMSAEIESLRVNQTFSI----VNLPPGKRALGNKWVYKIKYRSDGAIERYKARLVV 677
Query: 583 RGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEE 637
G+ Q ET+ P K +TV L +A + Q+D+ +A+L+ DLKEE
Sbjct: 678 LGNCQKEGVDYDETFAPVAKMSTVR-----LFLGVAAARDWHVHQMDVHNAFLHGDLKEE 732
Query: 638 LYIRAPP--HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTA 695
+Y++ P + +KV +L+KSLYGLKQ+ W + + L ++ G + +F+
Sbjct: 733 VYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSAL-KQYGFTQSLSDYSLFSY 791
Query: 696 KEPLKLV-VCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILG 754
V V ++VDD+++ G + + +F S L F H ++ G+ +Y LG
Sbjct: 792 NNDGVFVHVLVYVDDLIISGSCPDAVAQFKSYLESCF---------HMKDLGLLKY-FLG 841
Query: 755 VELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDY 814
+E+ + + +K + D + +G+ L + P + L+L
Sbjct: 842 IEVS-RNAQGFYLSQRKYVLDIISEMGL-LGARPSAFP--------LEQNHKLSLSTSPL 891
Query: 815 KDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDK 874
+RLVG Y+ R E+ Y V+ LAQ P + A ++ +YL +
Sbjct: 892 LSDSSRYRRLVGRLIYLA-VTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQ 950
Query: 875 KLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKT-IAAKSSKIKLTCVSSTE 933
++ S +I D+ +A + ++ G T I+ K+ K SS E
Sbjct: 951 GIL--LSSTSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTISRSSAE 1008
Query: 934 AEIYSISNCVTYLRGIE-ILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSR 992
AE +++ L ++ +L D ++ +++ +DS+ A+A+ E KH
Sbjct: 1009 AEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAIALSVNPVQHE-RTKHVEVD 1067
Query: 993 AMRIRDECNELGLVLEYIPTKENTADILTKPLSMK 1027
IRD + + ++P+ + ADILTK L K
Sbjct: 1068 CHFIRDAILDGIIATSFVPSHKQLADILTKALGEK 1102
>At2g15870 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1264
Score = 97.1 bits (240), Expect = 1e-19
Identities = 117/467 (25%), Positives = 206/467 (44%), Gaps = 52/467 (11%)
Query: 584 GDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAF----QLDISSAYLYADLKEELY 639
G +S T++ TT+ +A MT + + L + + QLD+S+A+L +L+EE+Y
Sbjct: 818 GAMESTNTWE----ITTLPKVAKMTTIKLLLKISASKKWFMKQLDVSNAFLNGELEEEIY 873
Query: 640 IRAPPHMNAR-------NKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCV 692
++ P R N V +L +S+YGLKQ+ W K+F L+ RF+K
Sbjct: 874 MKLPEGYAERKGIILPSNVVCRLKRSIYGLKQASRQW---FKKF---SASLLSLRFFKTH 927
Query: 693 FTAKEPLK------LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDG 746
LK +VV ++VDD+++ N+ ++ L F + + D +
Sbjct: 928 GDHTLFLKDCGGEYVVVLVYVDDIVIASTNEAAAVQLSQDLQNLFKLRDLGDLKYFLGLE 987
Query: 747 VNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGED 806
+ + G+ L +K + KL + VP+ + + KV G +
Sbjct: 988 ITRTE-AGISLCQRKYALELLASTGMINCKL--VSVPMVPNLKLMKVDG----------E 1034
Query: 807 LTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQ 866
L D + Y+ R+VG Y+ R +I + VN L Q P+ L A ++ Q
Sbjct: 1035 LLEDREQYR-------RIVGTLMYLTIT-RPDITFAVNKLCQFSYAPTTAHLQAAHRVLQ 1086
Query: 867 YLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKT-IAAKSSKIK 925
Y+ T + L YS + + +D+ +A D + + ++ G + I+ +S K
Sbjct: 1087 YIKGTVGQGLF--YSASSDLTLKGFADSDWASCPDSRHSTTGFTMFVGDSLISLRSKKQH 1144
Query: 926 LTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFL 985
+ SS EAE +++ L + L+ L +I L +DS A+ I E
Sbjct: 1145 VVSRSSAEAEYRALALATCELVWLHTLLASLTAATTIPILFSDSTAAIYIAINPVFHE-R 1203
Query: 986 KKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
KH +R++ ++ L L ++ T++ ADI+TKPL F+ L
Sbjct: 1204 TKHIEIDCHTVREKIDDGELKLLHVRTEDQVADIMTKPLFPNQFEHL 1250
>At4g10990_1 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1077
Score = 96.7 bits (239), Expect = 2e-19
Identities = 138/553 (24%), Positives = 233/553 (41%), Gaps = 68/553 (12%)
Query: 507 MNTSINYSEA-------ISRNRNENEKLAFQNAYK---------KEIAQLTKMHTWSEEL 550
M+T+I+Y + I E E AF A K +E+ L + TW E
Sbjct: 499 MSTAISYDKLTPLFHSYICAYNVETEPKAFTQAMKSEKWTRAANEELHALEQNKTWIVE- 557
Query: 551 IDATLIPKQRIINSMFIFTTKRD-----NSKKCRLVARGDQQS-----LETYDPDQKATT 600
+L + ++ ++FT K + K RLVA+G Q +ET+ P K +
Sbjct: 558 ---SLTEGKNVVGCKWVFTIKYNPDGSIERYKARLVAQGFTQQEGIDYMETFSPVAKFGS 614
Query: 601 VHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMN-------ARNKVL 653
V L+ LA A +LT Q+D+S+A+L+ +L EE+Y+ P V
Sbjct: 615 VK---LLLGLAAATGWSLT--QMDVSNAFLHGELDEEIYMSLPQGYTPPTGISLPSKPVC 669
Query: 654 KLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDMLVV 713
+L KSLYGLKQ+ W + + I+ +F ++V L D L++
Sbjct: 670 RLLKSLYGLKQASRQWYKRLSSVFL-GANFIQSPADNTMFVKVSCTSIIVVLVYVDDLMI 728
Query: 714 GRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSL 773
ND +E + +L R + K+ + G R LG+E+ + E + +K
Sbjct: 729 ASNDSSAVENLKEL-LRSEFKIKDLGPAR--------FFLGLEIA-RSSEGISVCQRKYA 778
Query: 774 EDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGH 833
++ L +G+ S + +P P +++ L + + LVG Y+
Sbjct: 779 QNLLEDVGL---SGCKPSSIPMDPNLHLTKEMGTLLPN------ATSYRELVGRLLYLCI 829
Query: 834 KFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISD 893
R +I + V+ L+Q P+ + A ++ +YL + L+ YS + SD
Sbjct: 830 T-RPDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLM--YSASSELCLNGFSD 886
Query: 894 AAFAGNNDFKSQSGALYLWNGKT-IAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEIL 952
A + D + ++ G + I KS K + SSTE+E S++ + ++ L
Sbjct: 887 ADWGTCKDSRRSVTGFCIYLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQL 946
Query: 953 VDKLLNTKSI-IKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIP 1011
+ L T + KL D++ A+ + E KH +RD+ L ++P
Sbjct: 947 LKDLHVTMTCPAKLFCDNKSALHLATNPVFHE-RTKHIEIDCHTVRDQIKAGKLKTLHVP 1005
Query: 1012 TKENTADILTKPL 1024
T ADILTKPL
Sbjct: 1006 TGNQLADILTKPL 1018
>At1g57640 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1468
Score = 96.3 bits (238), Expect = 2e-19
Identities = 125/515 (24%), Positives = 227/515 (43%), Gaps = 49/515 (9%)
Query: 528 AFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNSK-----KCRLVA 582
A++ A EI L T+S L P +R + + +++ K + K RLV
Sbjct: 970 AWREAMSAEIESLRVNQTFSI----VNLPPGKRALGNKWVYKIKYRSDGAIERYKARLVV 1025
Query: 583 RGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEE 637
G+ Q ET+ P K +TV L +A + Q+D+ +A+L+ DLKEE
Sbjct: 1026 LGNCQKEGVDYDETFAPVAKMSTVR-----LFLGVAAARDWHVHQMDVHNAFLHGDLKEE 1080
Query: 638 LYIRAPP--HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFT- 694
+Y++ P + +KV +L+KSLYGLKQ+ W + + L ++ G + +F+
Sbjct: 1081 VYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSAL-KQYGFTQSLSDYSLFSY 1139
Query: 695 AKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILG 754
+ + + V ++VDD+++ G + + +F S L F H ++ G+ +Y LG
Sbjct: 1140 NNDGIFVHVLVYVDDLIISGSCPDAVAQFKSYLESCF---------HMKDLGLLKY-FLG 1189
Query: 755 VELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDY 814
+E+ + + +K + D + +G+ L + P + L+L
Sbjct: 1190 IEVS-RNAQGFYLSQRKYVLDIISEMGL-LGARPSAFP--------LEQNHKLSLSTSPL 1239
Query: 815 KDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDK 874
+RLVG Y+ R E+ Y V+ LAQ P + A ++ +YL +
Sbjct: 1240 LSDSSRYRRLVGRLIYL-VVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQ 1298
Query: 875 KLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKT-IAAKSSKIKLTCVSSTE 933
++ S +I D+ +A + ++ G T I+ K+ K SS E
Sbjct: 1299 GIL--LSSTSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAE 1356
Query: 934 AEIYSISNCVTYLRGIE-ILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSR 992
AE +++ L ++ +L D ++ +++ +DS+ A+A+ E KH
Sbjct: 1357 AEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAIALSVNPVQHE-RTKHVEVD 1415
Query: 993 AMRIRDECNELGLVLEYIPTKENTADILTKPLSMK 1027
IRD + + ++P+ + ADILTK L K
Sbjct: 1416 CHFIRDAILDGIIATSFVPSHKQLADILTKALGEK 1450
>At2g20460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1461
Score = 95.5 bits (236), Expect = 4e-19
Identities = 128/515 (24%), Positives = 217/515 (41%), Gaps = 59/515 (11%)
Query: 532 AYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTK--RDNSK---KCRLVARGDQ 586
A +EI + + TW +L P ++ + ++FT K D S K R+VA+G
Sbjct: 962 AIDQEIGAMERTDTWEI----TSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYT 1017
Query: 587 QS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIR 641
Q ET+ P K TV L L ++ QLDIS+A+L DL+E +Y++
Sbjct: 1018 QKEGLDYTETFSPVAKMATVKLL-----LKVSASKKWYLNQLDISNAFLNGDLEETIYMK 1072
Query: 642 APPHMN-------ARNKVLKLNKSLYGLKQSGANWCALIKQFLV----EECGLIEDRFWK 690
P N V +L KS+YGLKQ+ W L+ E+ F +
Sbjct: 1073 LPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVR 1132
Query: 691 CVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEY 750
C+ + +V+ ++VDD+++ ++ L F + E G +Y
Sbjct: 1133 CIGSEF----IVLLVYVDDIVIASTTEQAAQSLTEALKASFKLR---------ELGPLKY 1179
Query: 751 DILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLD 810
LG+E+ + E + +K + L + + +P P +S + L L+
Sbjct: 1180 -FLGLEVA-RTSEGISLSQRKYALELLTSADM---LDCKPSSIPMTPNIRLSKNDGLLLE 1234
Query: 811 DQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWD 870
D++ +RLVG Y+ R +I + VN L Q P L ++ QY+
Sbjct: 1235 DKEM------YRRLVGKLMYLTIT-RPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKG 1287
Query: 871 TRDKKLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCV- 929
T + L YS + + +DA + D + + ++ G ++ + SK + T
Sbjct: 1288 TVGQGLF--YSAEDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSR 1345
Query: 930 SSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHT 989
SS EAE +++ + + L+ L + L +DS A+ I E KH
Sbjct: 1346 SSAEAEYRALALASCEMAWLSTLLLALRVHSGVPILYSDSTAAVYIATNPVFHE-RTKHI 1404
Query: 990 GSRAMRIRDECNELGLVLEYIPTKENTADILTKPL 1024
+R++ + L L ++ TK+ ADILTKPL
Sbjct: 1405 EIDCHTVREKLDNGQLKLLHVKTKDQVADILTKPL 1439
>At4g27200 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 819
Score = 94.4 bits (233), Expect = 8e-19
Identities = 131/514 (25%), Positives = 217/514 (41%), Gaps = 65/514 (12%)
Query: 532 AYKKEIAQLTKMHTWSEELIDATLIPKQ---RIINSMFIFTTKRD-----NSKKCRLVAR 583
A +EI ++ TWS L+P + ++ S ++F TK N K R+VA+
Sbjct: 245 AMTEEIGNCSETQTWS-------LVPYKSDMHVLGSKWVFRTKLHADGTLNKLKARIVAK 297
Query: 584 GDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEEL 638
G Q LETY P + TV L+ LA AL+ ++ Q+D+ +A+L+ DLKE +
Sbjct: 298 GFLQEEGIDYLETYSPVVRTPTVR---LVLHLATALNWDIK--QMDVKNAFLHGDLKETV 352
Query: 639 YIRAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEP 698
Y+ P R+ V L+KS+YGLKQS W FL+ E G + +F
Sbjct: 353 YMTQPAAN--RDHVCLLHKSIYGLKQSPRAWFDKFSTFLL-EFGFFCRKSDPSLFIYAHN 409
Query: 699 LKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELE 758
L++ L + + ++ L+K F ++ + G H LG++++
Sbjct: 410 NNLILLLL----------SQTLTSLLAALNKEF--RMTDMGQH-------SLTFLGIQVQ 450
Query: 759 -YKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDK 817
+ G +M QK ED L + + P +P D + E+L D ++
Sbjct: 451 RQQNGLFM--SQQKYAEDLLIAASME-HCTPLPTPLP-VQLDRVPHQEELFSDPTYFRSI 506
Query: 818 VKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLI 877
LQ L R +I + VN + Q P+ ++ +Y+ T +
Sbjct: 507 AGKLQYLT--------LTRPDIQFAVNFVCQKMHQPTISDFHLLKRILRYIKGTITMGI- 557
Query: 878 WKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCV-SSTEAEI 936
YS + A SD+ + + G L + G + + SSK T SSTEAE
Sbjct: 558 -SYSRDSPTLLQAYSDSDWGNCKQTRRSVGGLCTFMGTNLVSWSSKKHPTVSRSSTEAEY 616
Query: 937 YSISNCVTYLRGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMR 995
S+S+ + + + L+ +L + +L D+ A+ + KH
Sbjct: 617 KSLSDAASEILWLSTLLRELRIPLPDTPELFCDNLSAV-YLTANPAFHARTKHFDIDFHF 675
Query: 996 IRDECNELGLVLEYIPTKENTADILTKPLSMKLF 1029
+R+ LV+++IP E ADI TK L + F
Sbjct: 676 VRERVALKALVVKHIPGSEQIADIFTKSLPYEAF 709
>At1g31210 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1415
Score = 91.7 bits (226), Expect = 5e-18
Identities = 150/637 (23%), Positives = 257/637 (39%), Gaps = 74/637 (11%)
Query: 422 YNHPTLEEVFESIERDPFNLTSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSP 481
+ H + E+ S+ P L S +P NTY S + + E N
Sbjct: 761 WQHNKISEI--SVPAAPVQLFS--KPIDLNTYAGSQVTEQLTDPEPTSNNEGSDEEVNPV 816
Query: 482 ARPPNKRIRRVNYVHAI--EHTKGIMQMNTSINYSEAISR-NRNENEKLA-------FQN 531
A +V HA+ GI + NT Y+ SR N E + LA +
Sbjct: 817 AEEIAANQEQVINSHAMTTRSKAGIQKPNT--RYALITSRMNTAEPKTLASAMKHPGWNE 874
Query: 532 AYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRD-----NSKKCRLVARGDQ 586
A +EI ++ +HTWS L+ T I++S ++F TK + K RLVA+G
Sbjct: 875 AVHEEINRVHMLHTWS--LVPPT--DDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFD 930
Query: 587 QS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIR 641
Q LET+ P + T+ VL ++ QLD+S+A+L+ +L+E +++
Sbjct: 931 QEEGVDYLETFSPVVRTATIR-----LVLDVSTSKGWPIKQLDVSNAFLHGELQEPVFMY 985
Query: 642 APPHMNARNK---VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEP 698
P K V +L K++YGLKQ+ W FL+ + G + + +F +
Sbjct: 986 QPSGFIDPQKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLL-DYGFVCSKSDPSLFVCHQD 1044
Query: 699 LK-LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVEL 757
K L + L+VDD+L+ G + + + + L RF K + + LG+++
Sbjct: 1045 GKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRY----------FLGIQI 1094
Query: 758 E-YKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKD 816
E Y G ++ D L G+ +P +P + L + +
Sbjct: 1095 EDYANGLFLH--QTAYATDILQQAGMS-DCNPMPTPLP----------QQLDNLNSELFA 1141
Query: 817 KVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKL 876
+ + + L G Y+ R +I + VN + Q P+ ++ +Y+ T L
Sbjct: 1142 EPTYFRSLAGKLQYLTIT-RPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGMGL 1200
Query: 877 IWKYSGPKNNEIT--AISDAAFAG-NNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTE 933
K +N+ +T A SD+ AG N +S +G L I+ + + SSTE
Sbjct: 1201 PIK----RNSTLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTE 1256
Query: 934 AEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRA 993
AE +++ + I L+ L + + + + KH +
Sbjct: 1257 AEYRALTYAAREITWISFLLRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRSKHFDTDY 1316
Query: 994 MRIRDECNELGLV-LEYIPTKENTADILTKPLSMKLF 1029
IR++ LGL+ ++I AD+ TK L + F
Sbjct: 1317 HYIREQV-ALGLIETQHISATFQLADVFTKSLPRRAF 1352
>At4g21360 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1308
Score = 91.3 bits (225), Expect = 7e-18
Identities = 133/602 (22%), Positives = 229/602 (37%), Gaps = 87/602 (14%)
Query: 463 SGGDFDEEQEQECSSDNSPA---------------------RPPNKRIRRVNYVHAIEHT 501
+GG EE +QE S+NS R PN + +Y H
Sbjct: 750 TGGVTIEEIDQESDSENSVTQEPLIASIDLSNYQSARDRERRAPNPPQKLADYTHFALAL 809
Query: 502 KGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPK-QR 560
+M + + + + + K+EI L K TW D PK Q+
Sbjct: 810 --VMAEEIESEEPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTW-----DIVEWPKEQK 862
Query: 561 IINSMFIFTTK------RDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMAL 614
+I+ ++F K K RLVARG Q + A V H+++ +++ +
Sbjct: 863 VISCRWLFKLKPGIPGVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVV 922
Query: 615 DHNLTAFQLDISSAYLYADLKEELYIRAPPHMNA---RNKVLKLNKSLYGLKQSGANWCA 671
++ Q+D+ + +L+ +L + LY+ P +++V L KSLYGLKQ+ W
Sbjct: 923 KDDMELEQMDVKTTFLHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQAPRQWNK 982
Query: 672 LIKQFLVEECGLIEDRFWKCVFTAK-EPLKLV-VCLFVDDMLVVGRNDEHIIEFISKLSK 729
F++ CV+ + P + V + L+VDDML+ ++ I + LS
Sbjct: 983 KFHAFML-SLQFARSEHDSCVYVKEVNPGEFVYLLLYVDDMLLAAKSKSEISKLKEALSL 1041
Query: 730 RFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPR 789
+F+ K + + ILG+++ + E Q DK V
Sbjct: 1042 KFEMKDMGAASR----------ILGIDIIRNRKEGTLRLSQTRYVDK-----VIQRFRMA 1086
Query: 790 QRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQH 849
KV P L + +V VG Y ++ Y + ++++
Sbjct: 1087 DAKVVSTPMGAHFKLTSLIDEIGSVDPEVVPYSSAVGSVMYAMIGTIPDVAYAMGLVSRF 1146
Query: 850 QLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNND-FKSQSGA 908
P A + E+ D+ A + D +S SG
Sbjct: 1147 MSRPGANL-----------------------------EVQGYCDSDHAADLDKRRSISGY 1177
Query: 909 LYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTD 968
++ G T++ KSS + +SST+AE +++ V I L++ + + D
Sbjct: 1178 VFTVGGNTVSWKSSLQHVVALSSTQAEFIALTEAVKEAIWIRGLLEDMGLQPKPATVWCD 1237
Query: 969 SQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKL 1028
SQ A+ + K + KH + IRD + + I T N AD+LTK + +K
Sbjct: 1238 SQSAICLSKNNAFHD-RTKHVEVKFYFIRDIIEAGEVKVRKIHTSVNPADMLTKCIPVKK 1296
Query: 1029 FK 1030
F+
Sbjct: 1297 FE 1298
>At3g59720 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1272
Score = 89.7 bits (221), Expect = 2e-17
Identities = 70/229 (30%), Positives = 110/229 (47%), Gaps = 38/229 (16%)
Query: 525 EKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPK-QRIINSMFIFTTKRDNSK------K 577
EK ++NA +EI + K TW + T +P + I +++ K+ NSK K
Sbjct: 846 EKKTWRNAMDEEIKSIQKNDTW-----ELTSLPNGHKAIGVKWVYKAKK-NSKGEVERYK 899
Query: 578 CRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYA 632
RLVA+G Q E + P + TV ++++A + Q+D+ SA+L
Sbjct: 900 ARLVAKGYSQRAGIDYDEIFAPVARLETVR-----LIISLAAQNKWKIHQMDVKSAFLNG 954
Query: 633 DLKEELYIRAPPH---MNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFW 689
DL+EE+YI P +KVL+L K LYGLKQ+ W I ++ E+ F
Sbjct: 955 DLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEK------DFI 1008
Query: 690 KCVFTAKEPLK------LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFD 732
KC + +K L+ CL+VDD++ G N EF +++K F+
Sbjct: 1009 KCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFE 1057
>At1g47650_1 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1232
Score = 89.4 bits (220), Expect = 3e-17
Identities = 119/507 (23%), Positives = 215/507 (41%), Gaps = 53/507 (10%)
Query: 536 EIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTK--RDNSK---KCRLVARGDQQS-- 588
EI + HTW TL ++ + ++F+ K D S K RLVA+G Q
Sbjct: 750 EIGAMETTHTWEI----TTLPAGKKAVGCKWVFSLKFLADGSLERYKARLVAKGYTQKEG 805
Query: 589 ---LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPH 645
+T+ P K TT+ L L ++ QLD+S+A+L +L+EE+Y++ P
Sbjct: 806 LDYTDTFSPVAKMTTIKLL-----LKISASKKWFLKQLDVSNAFLNGELEEEIYMKLPEG 860
Query: 646 MNAR-------NKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEP 698
AR N V +L +S+YGLKQ+ W L+ + G + +F +
Sbjct: 861 YAARKGITLPPNSVCRLKRSIYGLKQASRQWFKKFSASLL-DLGFKKTHGDHTLFIKEYD 919
Query: 699 LKLVVCL-FVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVEL 757
+ V+ L +VDD+ + ++ I+ L +RF + + D + LG+E+
Sbjct: 920 GEFVIVLVYVDDIAIASTSEGAAIQLTQDLQQRFKLRDLGDLKY----------FLGLEI 969
Query: 758 EYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDK 817
+ + +K + L G+ + + VP P + + LDD++
Sbjct: 970 ARTEAG-ISICQRKYALELLASTGM---VNCKPVSVPMIPNVKMMKTDGDLLDDRE---- 1021
Query: 818 VKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLI 877
+R+VG Y+ R +I + VN L Q P L A ++ QY+ + + L
Sbjct: 1022 --QYRRIVGKLMYLTIT-RLDITFAVNKLCQFSSAPRTSHLQAAYRVLQYIKGSVGQGLF 1078
Query: 878 WKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKT-IAAKSSKIKLTCVSSTEAEI 936
YS + + +D+ +A D + + ++ G + I+ +S K + SS EAE
Sbjct: 1079 --YSASADLTLKGFADSDWASCPDSRRSTTGFSMFVGDSLISWRSKKQHVVSRSSAEAEY 1136
Query: 937 YSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRI 996
+++ L + L+ L + + L +DS A+ I E KH +
Sbjct: 1137 RALALVTCELVWLHTLLMSLKASYLVPVLYSDSTTAIYIATNPVFHE-RTKHIELDCHTV 1195
Query: 997 RDECNELGLVLEYIPTKENTADILTKP 1023
R++ + L L ++ T++ + P
Sbjct: 1196 REKLDNGELKLLHVRTEDQPSTAAYPP 1222
>At4g07810 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1366
Score = 89.0 bits (219), Expect = 4e-17
Identities = 116/474 (24%), Positives = 200/474 (41%), Gaps = 88/474 (18%)
Query: 577 KCRLVARGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLY 631
K RLVA G Q ++T+ P K T+V +LA+A HN + Q+D+++A+L+
Sbjct: 950 KARLVANGYTQQEGVDYIDTFSPIAKLTSVR-----LILALAAIHNWSISQMDVTNAFLH 1004
Query: 632 ADLKEELYIRAPPHMNAR-------NKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLI 684
D +EE+Y++ P R V +L KSLYGLKQ+ W L++ G +
Sbjct: 1005 GDFEEEIYMQLPQGYTPRKGELLPKRPVCRLVKSLYGLKQASRQWFHKFSGVLIQN-GFM 1063
Query: 685 EDRFWKCVFT-AKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHRE 743
+ F +F +E L + ++VDD+++V D +IE L+K F K + +
Sbjct: 1064 QSLFDPTLFVRVREDTFLALLVYVDDIMLVSNKDSAVIEVKQILAKEFKLKDLGQKRY-- 1121
Query: 744 EDGVNEYDILGVELEYKKGEYMKFGMQK---SLEDKLPHLGVPLYSHPRQRKVPGCPGDY 800
LG+E+ K E + +K L ++ LG P + +
Sbjct: 1122 --------FLGLEIARSK-EGISISQRKYALELLEEFGFLGCKPVPTPMELNL------- 1165
Query: 801 ISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDR 860
L+ +D H ++L+G Y+ R +I + VN L Q+ P L
Sbjct: 1166 -----KLSQEDGALLLDASHYRKLIGRLVYL-TVTRPDICFAVNKLNQYMSAPREPHLMA 1219
Query: 861 AAQLCQYLWDTRDKKLIWKYSGPKNNEIT--AISDAAFAGNNDFKSQSGALYLWNGKTIA 918
A ++ +YL + + + + P ++ +T A +DA ++ N S S ++ W
Sbjct: 1220 ARRILRYLKNDPGQGVFY----PASSTLTFRAFADADWS-NCPESSISISIVFW------ 1268
Query: 919 AKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKR 978
+KL STEA + +L+ I + D + A+ I K
Sbjct: 1269 -----LKL----STEAWL-------------------VLSLPDTIFVYYDDESALHIAKN 1300
Query: 979 KEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
E K + +R++ + ++ T+ N D+LTKPL+ F L
Sbjct: 1301 SVFHESTKNFLHDIHV-VREKVAVGFIKTLHVDTEHNIVDLLTKPLTALRFNYL 1353
>At4g04410 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1017
Score = 88.6 bits (218), Expect = 5e-17
Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 24/218 (11%)
Query: 531 NAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNS-----KKCRLVARGD 585
NA E + + HTW EE L P +R ++S ++FT K ++ K RLVA G
Sbjct: 741 NAVADETGAMIRNHTWDEE----DLPPGKRAVSSKWVFTIKYLSNGEIERHKARLVACGF 796
Query: 586 QQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYI 640
Q+ ET+ P K TV VL++A + + +Q+D+ +A+L +L+EE+Y+
Sbjct: 797 TQTYGRDYTETFAPVAKLHTVR-----VVLSLATNLSWDLWQMDVKNAFLQGELEEEVYM 851
Query: 641 RAPPHMN---ARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKE 697
PP + A KVL+L K++YGLKQS W + L + G + +FT +
Sbjct: 852 TPPPGLEDSIAPGKVLRLRKAIYGLKQSPRAWYHNLSTTLKGK-GFKKSEADHTLFTLQS 910
Query: 698 PLKLVVCL-FVDDMLVVGRNDEHIIEFISKLSKRFDTK 734
++V L +VD++++ G N E I + L FD K
Sbjct: 911 DQGIIVALIYVDNIIISGDNKEGIHDTKLFLKSTFDIK 948
>At2g06950 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1402
Score = 88.6 bits (218), Expect = 5e-17
Identities = 111/440 (25%), Positives = 190/440 (42%), Gaps = 48/440 (10%)
Query: 532 AYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRD-----NSKKCRLVARGDQ 586
A +E+ ++ +TWS L+ T P ++ S ++F TK N K R+VA+
Sbjct: 940 AMTEEMGNCSETNTWS--LVPYT--PNMHVLGSKWVFRTKLHADGTLNKLKARIVAKCFL 995
Query: 587 QS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIR 641
Q LETY P + TV L+ LA AL+ L Q+D+ +A+L+ DL E +Y+
Sbjct: 996 QEEGIGYLETYSPVVRTPTVQ---LVLHLATALNWELK--QMDVKNAFLHGDLNETVYMT 1050
Query: 642 APPHMNARNK---VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEP 698
P ++K V L+KS+YGLKQS W FL+E A
Sbjct: 1051 QPAGFVDKSKPTHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIYAHNN 1110
Query: 699 LKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELE 758
+++ L+VDDM++ G + + + ++ L+K F R D + LG++++
Sbjct: 1111 NLILLLLYVDDMVITGNSSQTLSSLLAALNKEF----------RMTDMGQLHYFLGIQVQ 1160
Query: 759 YKK-GEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDK 817
+ G +M QK ED L + + P +P D + E+ D ++
Sbjct: 1161 RNQHGLFM--SQQKYAEDLLVASAMENCT-PLPTPLP-VQLDRVPHQEEPFTDPTYFRSI 1216
Query: 818 VKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLI 877
LQ L R +I + VN + Q P+ ++ +Y+ T +
Sbjct: 1217 AGKLQYLT--------LTRPDIHFAVNFVCQKMHQPTMSDFHLLKRILRYIKGTITMGIS 1268
Query: 878 WKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKTIAAKSSKIKLTCV-SSTEAEI 936
+ + P + A SD+ + + G L + + + SSK T SSTEAE
Sbjct: 1269 YNQNSP--TLLQAYSDSDWGNCKLTRRSVGGLCTFMATNLVSWSSKKHPTVSRSSTEAEY 1326
Query: 937 YSISNCVTYLRGIEILVDKL 956
++S+ + + + L+ +L
Sbjct: 1327 RTLSDAASEILWLSTLLREL 1346
>At1g36035 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1418
Score = 87.0 bits (214), Expect = 1e-16
Identities = 134/626 (21%), Positives = 245/626 (38%), Gaps = 127/626 (20%)
Query: 423 NHPTLEEVFESIERDPFNLTSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPA 482
NHPT +F ++E+D + R +S +SG D EQ E + +S
Sbjct: 898 NHPT--RLF-TVEQDDDEQVEEIRHSTSLV---------ESGTSKDVEQTTEPRTSSSRL 945
Query: 483 RPPNKRIRR--VNYVHAIEHTKGI-MQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQ 539
P + + T+GI M I ++ +S +N ++A ++ + +
Sbjct: 946 TVPKSHSETDVIGELDGDRVTRGIKMNYRDMILFTCFVSSIEPKNIEIALEDEFWYQACH 1005
Query: 540 LTKMHTWSEELIDATLIPKQ---RIINSMFIFTTKRDNS-----KKCRLVARGDQQSLET 591
H E+ D L+P+Q ++ + +IF K D + RLVA+G Q +E
Sbjct: 1006 EELNHFSRHEVWD--LVPRQVHVNVVGTKWIFKNKTDEEGNVTRNRARLVAQGYSQ-VEG 1062
Query: 592 YDPDQKATTVHHL-ALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYI---RAPPHMN 647
D D+ V L ++ +L ++ + FQ+D+ SA+L ++EE+++ + N
Sbjct: 1063 IDFDETFAPVARLESIRLLLGISCLLKIKLFQMDVKSAFLNGVIQEEVFVSQLKGFEDSN 1122
Query: 648 ARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLFV 707
+ V KL K+LYGLKQ+ A KQ LV
Sbjct: 1123 LPDHVYKLKKALYGLKQAP---MACTKQKLVS---------------------------- 1151
Query: 708 DDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELE---YKKGEY 764
+F+ ++K F+ +V + NH + + D GV + Y +G
Sbjct: 1152 --------------DFVESMTKEFEMSMVGEMNHFLGLQIKQTD-EGVHISQSMYAQGLI 1196
Query: 765 MKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRL 824
+FGMQ + K P +S+ L+ D+ K + +
Sbjct: 1197 QRFGMQTAKTSKTP----------------------MSATAKLSADEAGLSVDEKMYRGM 1234
Query: 825 VGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPK 884
+G Y+ R ++ + V + A++Q P L+ + +Y+ T D
Sbjct: 1235 IGSLLYLTAS-RPDLCFSVGVCARYQANPKQSHLNAMKWILKYVKGTTD----------- 1282
Query: 885 NNEITAISDAAFAGN-NDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCV 943
GN +D +S +G + ++ S K +S+ EAE ++ +C
Sbjct: 1283 ------------VGNLDDRRSTTGGCFFLRNNLVSWHSKKQSCVSLSTAEAEYIALGSCC 1330
Query: 944 TYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNEL 1003
T L ++ ++ T + + + D+ A+ I K KH R IR+
Sbjct: 1331 TQLLWMKQMLLDYGMTSNTLLVYCDNMSAINISKNPVQ-HSRTKHIDIRHHFIRELVENK 1389
Query: 1004 GLVLEYIPTKENTADILTKPLSMKLF 1029
+ + ++ +++ ADI TK L + F
Sbjct: 1390 IVEISHVSSEKQLADIFTKSLDLNSF 1415
>At2g07420 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1664
Score = 86.7 bits (213), Expect = 2e-16
Identities = 99/409 (24%), Positives = 168/409 (40%), Gaps = 65/409 (15%)
Query: 367 DSVPDTTNPNPSEDDDTINDKLKSIPIFNGNKYKGPRTTTNSFEPSYGGGTYTENYNHPT 426
+ + D T+ +PS+ + L+ + + N PRT+ T EN
Sbjct: 729 EDIQDLTD-SPSDRATNLRIILERLGVSNIQTQTTPRTSNPETI------TQPENMEEEE 781
Query: 427 LEEVFESIERDPFNLTSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPARP-- 484
EE E ++ S+ +E D + QE++ +S P P
Sbjct: 782 EEEEEEEEKQGKEQELITLEETESSKVQEKDTSLLNDDNGHTNNQEEDSNSREEPRIPRR 841
Query: 485 ----PNKRIRRVNYVH---AIEHTKGIMQMNTSI------------------NYSEAISR 519
+KR+ N V+ +EH ++ + Y EAI+
Sbjct: 842 SEHLKDKRVYYNNQVYFDNVVEHPIQVVCTLAHLPEEHQVFFGKVDQHWIPQTYEEAITH 901
Query: 520 NRNENEKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNSK--- 576
+++A E + HTW E+ L ++++ S ++F K +
Sbjct: 902 Q-------VWRDAIAAEKQAMENNHTWDED----ELPRGKKVVTSKWVFAIKYKSDGEIE 950
Query: 577 --KCRLVARGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAY 629
K RLVARG Q+ L+T+ P K TV VL++ + +Q+D+ +A+
Sbjct: 951 RYKARLVARGFTQTYGEDYLDTFAPVAKLHTVR-----VVLSLTTNLEWDLWQMDVKNAF 1005
Query: 630 LYADLKEELYIRAPP---HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIED 686
L +L+E++Y++ PP +NA NKV KL K++YGLKQS W + L+ G
Sbjct: 1006 LQGELEEKVYMKPPPGLEDINAPNKVFKLKKAIYGLKQSPRAWYHKLSTTLMGR-GFKRS 1064
Query: 687 RFWKCVFTAKEPLKLVVCL-FVDDMLVVGRNDEHIIEFISKLSKRFDTK 734
+FT +VV L +VDD+++ G + I + + L FD K
Sbjct: 1065 EADNTLFTLPSQKGIVVILVYVDDIIISGNDKVGIQDTKTFLKSVFDIK 1113
>At2g15700 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1166
Score = 85.9 bits (211), Expect = 3e-16
Identities = 79/304 (25%), Positives = 139/304 (44%), Gaps = 25/304 (8%)
Query: 442 TSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDN----SPARPPNKRIRRVNYVHA 497
TS SS ES+ + G + ++ + + + S RPP+ R ++V
Sbjct: 662 TSSSSSESSENLEESEMNEEVVGSENEQSLDDYLLARDMKRRSNIRPPS-RFEDEDFVAY 720
Query: 498 IEHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEELIDATLIP 557
T ++ +Y EA+ ++ + ++NA K+E+ K HTW +LI+
Sbjct: 721 ALATAEDLEEEEPKSYEEALKSSKRKQ----WENAMKEEMDSHKKSHTW--DLIEKP--E 772
Query: 558 KQRIINSMFIFTTK------RDNSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLA 611
KQ++I +IF K K RLVA+G Q + + V H+++ +L+
Sbjct: 773 KQKLIGCKWIFKLKPGIPGVEKQRYKARLVAKGFSQQEGIDYNEVFSLVVKHVSIRLMLS 832
Query: 612 MALDHNLTAFQLDISSAYLYADLKEELYIRAPPHM---NARNKVLKLNKSLYGLKQSGAN 668
+ ++ + Q+D+ +A+L+ +L+E + + P NKV L KSLYGLKQS
Sbjct: 833 LMVNMDYELEQMDVKTAFLHGNLEERILMSQPEGFIQEGNENKVCLLRKSLYGLKQSPRL 892
Query: 669 WCALIKQFLVEECGLIEDRFWKCVF--TAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISK 726
W F+ ++ + CV+ + + + L+VDDML+ N I E +K
Sbjct: 893 WNQRFDAFMKDQ-KFERSCYDPCVYMRDTQTDKAIYLLLYVDDMLIASGNMAIIQELKNK 951
Query: 727 LSKR 730
L+ R
Sbjct: 952 LNSR 955
>At2g06840 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1102
Score = 85.1 bits (209), Expect = 5e-16
Identities = 141/567 (24%), Positives = 237/567 (40%), Gaps = 88/567 (15%)
Query: 495 VHAIEHTK--GIMQMNTS----INYSEAISRNRNENEKLAFQN---------AYKKEIAQ 539
VH+ HT G+ N S N+ ++ + NE+ F++ A +KEI
Sbjct: 582 VHSSPHTSSPGLSDSNVSPTVSANHIAFMAAILDSNEQNHFKDDVLIKEWCDAMQKEIEA 641
Query: 540 LTKMHTWSEELIDATLIPK-QRIINSMFIFTTKRDNS-----KKCRLVARGDQQS----- 588
L HTW D T +P ++ I+S +++ K ++ K RLV G+ Q
Sbjct: 642 LEANHTW-----DVTDLPHGKKAISSKWVYKLKFNSDGTLERHKARLVVMGNHQKEGIDF 696
Query: 589 LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNA 648
ET+ P K TTV L LA+A + FQ+D+ +A+L+ DL++E
Sbjct: 697 KETFAPVAKMTTVRLL-----LAVAAAKDWDVFQMDVHNAFLHGDLEQE----------- 740
Query: 649 RNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTA-KEPLKLVVCLFV 707
SLYGLKQ+ W A + L + G + +F+ ++ + ++V
Sbjct: 741 ---------SLYGLKQAPRCWFAKLSTAL-RKLGFTQSYEDYSLFSLNRDGTVIHFLVYV 790
Query: 708 DDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKF 767
DD ++VG N + I F L K F H ++ G +Y LG+E+ + +
Sbjct: 791 DDFIIVGNNLKAIDHFKEHLHKCF---------HMKDLGKLKY-FLGLEVS-RGADGFCL 839
Query: 768 GMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGL 827
QK D + G+ Y + VP + L D +RLV
Sbjct: 840 SQQKYALDIINEAGLLGY---KPSAVP------MELHHKLGSISSPVFDNPAQYRRLVDR 890
Query: 828 ASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNE 887
Y+ R ++ Y V+IL+Q P +L +YL + D+ ++ + +
Sbjct: 891 FIYLTIT-RPDLSYAVHILSQFMQTPLEAHWHATLRLVRYLKGSPDQGILLR--SDRALS 947
Query: 888 ITAISDAAFAGNNDFKSQSGALYLWNGKT-IAAKSSKIKLTCVSSTEAEIYSISNCVTYL 946
+TA D+ + + A L+ G T I+ K+ K SS EAE +++ + +
Sbjct: 948 LTAYCDSDYNPCPRTRRSLSAYVLYLGDTPISWKTKKQDTVSSSSAEAEYRAMAYTLKEI 1007
Query: 947 RGIEILVDKL-LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGL 1005
+ ++ L+ L ++ I L DSQ A+ I E KH ++RD + +
Sbjct: 1008 KWLKALMTTLGVDHTQPILLFCDSQAAIHIAANPVFHE-RTKHIEKDCHQVRDAVTDKVI 1066
Query: 1006 VLEYIPTKENTADILTKPLSMKLFKLL 1032
+I +T D+LTK L F+ L
Sbjct: 1067 STPHI----STTDLLTKALPRPTFERL 1089
>At1g34545 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 427
Score = 83.6 bits (205), Expect = 1e-15
Identities = 103/412 (25%), Positives = 177/412 (42%), Gaps = 34/412 (8%)
Query: 622 QLDISSAYLYADLKEELYIRAPP-------HMNARNKVLKLNKSLYGLKQSGANWCALIK 674
QLDIS+A+L DL EE+Y++ P N V +L KS+YGLKQ+ W
Sbjct: 20 QLDISNAFLNGDLDEEIYMKLPDGYADIKGDSLPPNAVCRLKKSIYGLKQASRQWFKKFS 79
Query: 675 QFLVEECGLIEDRFWKCVFTAKEPLKLVVCL-FVDDMLVVGRNDEHIIEFISKLSKRFDT 733
+ L+ + G ++ + +F + + L +VDD+++ + I L + F
Sbjct: 80 ESLL-KLGFMKQQGDHTLFVRCQGSDFIALLVYVDDIVIASTTESLAISLTEALKESFKL 138
Query: 734 KVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKV 793
+ E G +Y LG+E+ + E + +K + L G+ + +
Sbjct: 139 R---------ELGPLKY-FLGLEVA-RTTEGISLCQRKYALELLTSAGM---LDCKPSTI 184
Query: 794 PGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYP 853
P P +S + + L+D + + LVG Y+ R +I + VN L Q P
Sbjct: 185 PMTPNLRLSKADGVLLEDAEM------YRSLVGRLMYLTIT-RPDITFAVNKLCQFSSAP 237
Query: 854 SAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWN 913
L ++ QY+ T + L YS + + +DA + D + + ++
Sbjct: 238 RTSHLTAVYKVLQYIKGTVGQGLF--YSADSDLTLKGYTDADWGTCPDSRRSTTGFTMFV 295
Query: 914 GKT-IAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPA 972
G + I+ +S K SS EAE +++ + + L+ L S+ L +DS A
Sbjct: 296 GSSLISWRSKKQPTVSRSSAEAEYRALALASCEMAWLFTLLIALRVATSVPILYSDSTAA 355
Query: 973 MAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPL 1024
+ I E KH +RD+ + L L ++ T++ ADILTKPL
Sbjct: 356 VYIAINPVFHE-RTKHIEIDCHTVRDKLDNGQLKLLHVKTEDQVADILTKPL 406
>At2g17490 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 822
Score = 83.2 bits (204), Expect = 2e-15
Identities = 58/166 (34%), Positives = 84/166 (49%), Gaps = 17/166 (10%)
Query: 577 KCRLVARGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLY 631
K RLVA+G Q LET+ P + H + +L +A FQLD+ SA+L
Sbjct: 525 KARLVAKGFTQQHGVDYLETFAPVSR-----HETIRLILVVAAQRKWKLFQLDVKSAFLN 579
Query: 632 ADLKEELYIRAPPHMNARNK---VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRF 688
L+EE+Y P K VL+L+K+LYGLKQ+ W + I +F E D
Sbjct: 580 GTLEEEIYAEQPLGFEEEGKEDHVLRLHKALYGLKQAPRAWYSRIDEFFQRENFTRSDN- 638
Query: 689 WKCVFTAKEPL--KLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFD 732
KE L LVVC++VDD++V G ++E + EF + + F+
Sbjct: 639 -DHALYTKEVLGKLLVVCIYVDDLIVTGDDEEMVEEFKTAMKNEFE 683
>At1g60020 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1194
Score = 82.8 bits (203), Expect = 3e-15
Identities = 61/192 (31%), Positives = 96/192 (49%), Gaps = 20/192 (10%)
Query: 557 PKQRIINSMFIFTTKRD-----NSKKCRLVARGDQQS-----LETYDPDQKATTVHHLAL 606
P Q + + +IFT K + N K R +A+G Q T+ P K+TTV
Sbjct: 935 PHQNFVGTRWIFTIKYNPDGSINRYKARFLAKGFHQQHGLDYSNTFSPVIKSTTVQ---- 990
Query: 607 MTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPP---HMNARNKVLKLNKSLYGLK 663
TVL +A+ + QLDI++A+L L E++Y+ PP + + N V L K+L+GLK
Sbjct: 991 -TVLDIAVSRSWDIRQLDINNAFLQGRLTEDVYVAQPPGFINPDRPNYVCHLKKALHGLK 1049
Query: 664 QSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLV-VCLFVDDMLVVGRNDEHIIE 722
Q+ W ++ FL+ CG +F + + + ++VDD L+ G N I +
Sbjct: 1050 QAPRAWYQELRGFLL-TCGFTNSVANTSLFIRQHNKDYIYILVYVDDFLITGSNSNLIAQ 1108
Query: 723 FISKLSKRFDTK 734
FI+ L+ RF K
Sbjct: 1109 FITCLANRFSLK 1120
>At4g28900 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1415
Score = 81.3 bits (199), Expect = 7e-15
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 28/210 (13%)
Query: 531 NAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRD-----NSKKCRLVARGD 585
+A +E + HTW D+ + P + ++F TK + K RLVA+G
Sbjct: 892 DAMGEEYDSFEETHTWDLVPPDSFITP----LGCRWVFKTKLKADGTLDRLKARLVAKGY 947
Query: 586 QQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYI 640
+Q +ETY P + TV T+L +A + QLD+ +A+L+ DLKE +Y+
Sbjct: 948 EQEEGVDYMETYSPVVRTATVR-----TILHVATINKWEIKQLDVKNAFLHGDLKETVYM 1002
Query: 641 RAPPHMNARNK---VLKLNKSLYGLKQSGANWCALIKQFLVE---ECGLIEDRFWKCVFT 694
PP +++ V KLNK++YGLKQ+ W FL+E C + + VF
Sbjct: 1003 YQPPGFENQDRPDYVCKLNKAIYGLKQAPRAWFDKFSTFLLEFGFICTYSDPSLF--VFL 1060
Query: 695 AKEPLKLVVCLFVDDMLVVGRNDEHIIEFI 724
L + + L++DDML+ G N ++ ++ +
Sbjct: 1061 KGRDL-MFLLLYMDDMLLTGNNKKYAMDLL 1089
>At2g15920 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1100
Score = 81.3 bits (199), Expect = 7e-15
Identities = 118/524 (22%), Positives = 219/524 (41%), Gaps = 87/524 (16%)
Query: 536 EIAQLTKMHTWSEELIDATLIPK-QRIINSMFIFTTK--RDNSK---KCRLVARGDQQS- 588
EI + + W + T +PK ++ + ++FT K D S K RLVA+G Q
Sbjct: 619 EIGAMESTNKW-----EITTLPKDKKAVGCKWVFTLKILADGSLERYKARLVAKGYTQKE 673
Query: 589 ----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPP 644
T+ P K TT+ L L + QLD+S+++L +L+EE+Y++ P
Sbjct: 674 GLDYTNTFSPVAKMTTIKLL-----LKIYASKKWFLKQLDVSNSFLNGELEEEIYMKLPE 728
Query: 645 HMNAR-------NKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWK------- 690
R N V +L +S+YGLKQ+ W K+F L+ F+K
Sbjct: 729 GSAERKGIILPSNAVCRLKRSIYGLKQASRQW---FKKF---SASLLSLGFFKIHGDHTL 782
Query: 691 -CVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNE 749
+ E + ++V ++VDD+++ N++ L F + + D + ++
Sbjct: 783 FLIDCGGEYVVVLVLVYVDDIVIASTNED--------LHNLFKLRDLGDLKYFLCLEISR 834
Query: 750 YDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTL 809
++ G+ L ++K + + K + VP+ ++ + K G +L
Sbjct: 835 TEV-GISLCHRKNAWELLASIGMINCK--PVSVPMITNVKLMKADG----------ELLE 881
Query: 810 DDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLW 869
D + Y+ V L L + + + L A ++ QY+
Sbjct: 882 DREQYRRIVGKLMDLT--------------------ITRPDITLRTTHLQAAHRVLQYIK 921
Query: 870 DTRDKKLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKT-IAAKSSKIKLTC 928
+ L YS + + +D+ + D + + ++ G + I+ +S K ++
Sbjct: 922 GIVGQGLF--YSASSDLTLKGFADSDWVSCADSRRSTTGFTMFVGDSLISLRSKKQRVVS 979
Query: 929 VSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKH 988
SS EAE +++ L + L+ L S+ L ++S A+ I E KH
Sbjct: 980 RSSAEAEYRALALATCELVSLHTLLVSLTAATSVPILFSNSTTAIYIAINPVFHE-RTKH 1038
Query: 989 TGSRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
T +R++ ++ L L ++ T++ ADI+TKPLS F+ L
Sbjct: 1039 TEIDCNTVREKVDDGELKLLHVRTEDQVADIMTKPLSPHQFEHL 1082
>At2g07010 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1413
Score = 80.9 bits (198), Expect = 1e-14
Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 27/221 (12%)
Query: 529 FQNAYKKEIAQLTKMHTWSEELIDATLIPKQRI-INSMFIFTTKRD-----NSKKCRLVA 582
+ +A KE+ L TW +++D +P ++ I S +++ TK + K RLV
Sbjct: 994 WNDAMYKEVDALEVNKTW--DIVD---LPTGKVAIGSQWVYKTKFNADGTVERYKARLVV 1048
Query: 583 RGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEE 637
+G+ Q ET+ P K TTV T+L + + +Q+D+ +A+L+ DL+EE
Sbjct: 1049 QGNNQIEGEDYTETFAPVVKMTTVR-----TLLRLVAANQWEVYQMDVHNAFLHGDLEEE 1103
Query: 638 LYIRAPP--HMNARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFT- 694
+Y++ PP + +KV +L KSLYGLKQ+ W + L + G I+ F+
Sbjct: 1104 VYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDAL-KRFGFIQGYEDYSFFSY 1162
Query: 695 AKEPLKLVVCLFVDDMLVVGRNDEHIIE-FISKLSKRFDTK 734
+ + ++L V ++VDD+++ G NDE++++ F L + F K
Sbjct: 1163 SCKGIELRVLVYVDDLIICG-NDEYMVQKFKEYLGRCFSMK 1202
>At1g26990 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1425
Score = 80.1 bits (196), Expect = 2e-14
Identities = 132/555 (23%), Positives = 230/555 (40%), Gaps = 81/555 (14%)
Query: 492 VNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQNAYKKEIAQLTKMHTWSEELI 551
++Y + E + + T+ + S R + + +A KEI+ + TWS +
Sbjct: 920 ISYSYLSEPFGAFINIITATKLPQKYSEARLDK---VWNDAMGKEISAFVRTGTWS--IC 974
Query: 552 DATLIPKQRI-INSMFIFTTK--RDNS---KKCRLVARGDQQS-----LETYDPDQKATT 600
D +P ++ + +I T K D S K RLVA+G Q T+ P K T
Sbjct: 975 D---LPAGKVAVGCKWIITIKFLADGSIERHKARLVAKGYTQQEGIDFFNTFSPVAKMVT 1031
Query: 601 VHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPP-HMNARNKVLKLNKSL 659
V L L++A QLDIS+A L DL+EE+Y++ PP + + + + N
Sbjct: 1032 VKVL-----LSLAPKMKWYLHQLDISNALLNGDLEEEIYMKLPPGYSEIQGQEVSPNAKC 1086
Query: 660 YGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEH 719
+G + +K A++ LVV ++VDD+L+ +
Sbjct: 1087 HG------DHTLFVK--------------------AQDGFFLVVLVYVDDILIASTTEAA 1120
Query: 720 IIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPH 779
E S+LS F + + + LG+E+ + + + +K + D L
Sbjct: 1121 SAELTSQLSSFFQLRDLGEPKF----------FLGIEIA-RNADGISLCQRKYVLDLLAS 1169
Query: 780 LGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEI 839
+S + +P P +S L+D K +R++G Y+ R +I
Sbjct: 1170 SD---FSDCKPSSIPMEPNQKLSKDTGTLLEDG------KQYRRILGKLQYL-CLTRPDI 1219
Query: 840 LYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGN 899
+ V+ LAQ+ P+ L ++ +YL T + L Y N ++ SD+ +
Sbjct: 1220 NFAVSKLAQYSSAPTDIHLQALHKILRYLKGTIGQGLF--YGADTNFDLRGFSDSDWQTC 1277
Query: 900 NDFKSQSGALYLWNGKTIAA-KSSKIKLTCVSSTEAEIYSISNCVTYL--RGIEILVDKL 956
D + ++ G ++ + +S K + +SS EAE ++S L G + K+
Sbjct: 1278 PDTRRCVTGFAIFVGNSLVSWRSKKQDVVSMSSAEAEYRAMSVATKELIWLGYILTAFKI 1337
Query: 957 LNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLE-YIPTKEN 1015
T L D++ A+ I E KH + ++R EC E G++ ++ T
Sbjct: 1338 PFTHPAY-LYCDNEAALHIANNSVFHE-RTKHIENDCHKVR-ECIEAGILKTIFVRTDNQ 1394
Query: 1016 TADILTKPLSMKLFK 1030
AD LTKPL K F+
Sbjct: 1395 LADTLTKPLYPKPFR 1409
>At4g04290 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 403
Score = 79.3 bits (194), Expect = 3e-14
Identities = 61/190 (32%), Positives = 97/190 (50%), Gaps = 20/190 (10%)
Query: 559 QRIINSMFIFTTKRDNSK-----KCRLVARGDQQS-----LETYDPDQKATTVHHLALMT 608
++ + S ++FT K + K RLVARG Q+ L+T+ P K T
Sbjct: 15 KKTVTSKWVFTIKYKSDGEIERYKARLVARGFTQTYGEDYLDTFAPVAKLHTFR-----V 69
Query: 609 VLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHM---NARNKVLKLNKSLYGLKQS 665
VL++A + +Q+D+ +A+L +L+EE+Y++ PP + NA NKV KL K++YGLKQS
Sbjct: 70 VLSLATNLEWDLWQMDVKNAFLQGELEEEVYMKPPPGLEVINAPNKVFKLKKAIYGLKQS 129
Query: 666 GANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCL-FVDDMLVVGRNDEHIIEFI 724
W + L+ G +FT +VV L +VDD+++ G + I +
Sbjct: 130 PRAWYHKLSTTLMGR-GFKTSEADNTLFTLPSQKGIVVILVYVDDIIISGNDKVGIQDTK 188
Query: 725 SKLSKRFDTK 734
+ L FD K
Sbjct: 189 TFLKSVFDIK 198
>At1g34904 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 413
Score = 79.3 bits (194), Expect = 3e-14
Identities = 56/167 (33%), Positives = 92/167 (54%), Gaps = 15/167 (8%)
Query: 577 KCRLVARGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLY 631
K RLVARG Q+ +ET+ P K TV VLA+A + + +Q+D+ +A+L
Sbjct: 20 KTRLVARGFTQTYGSDYMETFAPVAKLHTVR-----VVLALATNLSCGLWQMDVKNAFLQ 74
Query: 632 ADLKEELYIRAPPHMNAR---NKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRF 688
+L++++Y+ PP + +KVL+L K++YGLKQS W + + L ++ G +
Sbjct: 75 GELEDDVYMTPPPGLEDTIPCDKVLRLRKAIYGLKQSPRAWYHKLSRTL-KDHGFKKSES 133
Query: 689 WKCVFTAKEPLKLVVCL-FVDDMLVVGRNDEHIIEFISKLSKRFDTK 734
+FT + P +VV L +VDD+++ G N + I + L FD K
Sbjct: 134 DHTLFTLQSPQGIVVVLIYVDDLIITGDNKDGIDSTKTFLKSCFDIK 180
>At2g04820 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 387
Score = 76.6 bits (187), Expect = 2e-13
Identities = 95/385 (24%), Positives = 165/385 (42%), Gaps = 31/385 (8%)
Query: 652 VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLK-LVVCLFVDDM 710
V +LNK+LYGLKQ+ W ++ +L+ G +F K L V ++VDD+
Sbjct: 18 VCRLNKALYGLKQAPRAWYQELRNYLL-AAGFTNSLADTSLFIYKRANSYLYVLVYVDDI 76
Query: 711 LVVGRNDEHIIE-FISKLSKRFDTKVVNDGNHREEDGVNEYDILGVE-LEYKKGEYMKFG 768
++ G D +++ F L+ RF K + G Y LG+E KKG ++
Sbjct: 77 IITG--DASLVKNFNVSLADRFSLK---------DLGALSY-FLGIEATRTKKGLHLM-- 122
Query: 769 MQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLVGLA 828
+K + D L +H K P +++ L+L D K + ++G
Sbjct: 123 QRKYITDLLAK------THMLDAKPISTP---MATTPKLSLHSGTILDDAKEYRMIIGSL 173
Query: 829 SYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEI 888
Y+ R +I + VN L+Q P+ + A ++ +YL T+ + + P +
Sbjct: 174 QYLSFT-RPDIAFVVNRLSQFMHKPTDEHWQAAKRVLRYLAGTKSHGIFLRSDAPLT--V 230
Query: 889 TAISDAAFAGN-NDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVTYLR 947
+ SDA +AG+ D S + + + G I+ S K + SSTEAE +++N + L+
Sbjct: 231 HSFSDADWAGDLGDGLSTNAYIVYFGGSPISWSSKKQRRFSRSSTEAEYRAVANTASELQ 290
Query: 948 GIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGLVL 1007
I L+ ++ + + + + KH +R L +
Sbjct: 291 WICSLLSEMGISLPVAPVVYCDNMGATYLCANPVFHSKMKHVALDYHFVRGNIQTGALRV 350
Query: 1008 EYIPTKENTADILTKPLSMKLFKLL 1032
++ TK+ AD LTKPL F+ L
Sbjct: 351 SHLSTKDQLADALTKPLHRPRFQEL 375
>At2g14930 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1149
Score = 75.9 bits (185), Expect = 3e-13
Identities = 52/169 (30%), Positives = 89/169 (51%), Gaps = 19/169 (11%)
Query: 577 KCRLVARGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLY 631
K RLVA+G +Q LETY P ++ TV VL ++ N Q+D+ + +L+
Sbjct: 915 KARLVAQGFKQEEGIDYLETYSPVVRSATVR-----AVLHLSTIMNWELKQMDVKNGFLH 969
Query: 632 ADLKEELYIRAPPHMNAR---NKVLKLNKSLYGLKQSGANWCALIKQFLVE---ECGLIE 685
DL E +Y++ P + + V L+K+LYGLKQ+ W +FL+ C + +
Sbjct: 970 GDLTETVYMKQPAGFIDKAHPDHVCLLHKALYGLKQAPRAWFDKFSKFLLSFGFVCSMSD 1029
Query: 686 DRFWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTK 734
+ CV K +++ L+VDDM++ G + + + +S+L+K+F K
Sbjct: 1030 PSLFVCV---KNKDVIMLLLYVDDMVITGNSSKLLSSLLSELNKQFKMK 1075
>At4g14460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1489
Score = 75.1 bits (183), Expect = 5e-13
Identities = 124/530 (23%), Positives = 202/530 (37%), Gaps = 114/530 (21%)
Query: 523 ENEKLAFQNAYKKE------IAQLTKMH---TWSEELIDATLIPKQRIINSMFIFTTKRD 573
E E F A K E + +L M TWS E +L P + ++ ++FT K +
Sbjct: 1020 ETEPKTFSQAMKSEKWIRVAVEELQAMELNKTWSVE----SLPPDKNVVGCKWVFTIKYN 1075
Query: 574 -----NSKKCRLVARGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQL 623
K RLVA+G Q L+T+ P K T+ + L +A T Q+
Sbjct: 1076 PDGTVERYKARLVAQGFTQQEGIDFLDTFSPVAKLTSAKMM-----LGLAAITGWTLTQM 1130
Query: 624 DISSAYLYADLKEELYIRAPPHMN-------ARNKVLKLNKSLYGLKQSGANWCALIKQF 676
D+S A+L+ DL EE+++ P N V +L KS+YGLKQ+ W K+F
Sbjct: 1131 DVSDAFLHGDLDEEIFMSLPQGYTPPAGTILPPNPVCRLLKSIYGLKQASRQW---YKRF 1187
Query: 677 LVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVV 736
+ +++DD+++ ND + + L F K+
Sbjct: 1188 ------------------------VAALVYIDDIMIASNNDAEVENLKALLRSEF--KIK 1221
Query: 737 NDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGC 796
+ G R G +LG + M +L + +G PL + RK+
Sbjct: 1222 DLGPARFFLG-----LLGCKPS-------SIPMDPTLH-LVRDMGTPLPNPTAYRKL--- 1265
Query: 797 PGDYISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAK 856
I LT+ D V L + + S + + ++L Y+ L SA
Sbjct: 1266 ----IGRLLYLTITRPDITYAVHQLSQFISAPSDIHLQAAHKVLRYIKANPGQGLMYSAD 1321
Query: 857 VLDRAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNNDFKSQSGALYLWNGKT 916
++C + SDA +A D + ++ G +
Sbjct: 1322 Y-----EIC----------------------LNGFSDADWAACKDTRRSISGFCIYLGTS 1354
Query: 917 -IAAKSSKIKLTCVSSTEAEIYSISNCVTYLRGI-EILVDKLLNTKSIIKLKTDSQPAMA 974
I+ KS K + SSTE+E S++ + + ++L D + KL D++ A+
Sbjct: 1355 LISWKSKKQAVASRSSTESEYRSMAQATCEIIWLQQLLKDLHIPLTCPAKLFCDNKSALH 1414
Query: 975 IIKRKEDAEFLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPL 1024
E KH +RD+ L ++PT+ ADILTK L
Sbjct: 1415 SSLNPVFHE-RTKHIEIDCHTVRDQIKAGNLKALHVPTENQHADILTKAL 1463
>At4g16010 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1942
Score = 73.6 bits (179), Expect = 2e-12
Identities = 64/222 (28%), Positives = 106/222 (46%), Gaps = 34/222 (15%)
Query: 532 AYKKEIAQLTKMHTWSEELIDATLIP---KQRIINSMFIFTTKRD-----NSKKCRLVAR 583
A +E T+ TWS L+P ++ S ++F TK + + K RLVA+
Sbjct: 1723 AMHEEYDNCTEAQTWS-------LVPYTSDMNVLGSKWVFRTKLNADGSLDKLKARLVAK 1775
Query: 584 GDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEEL 638
G Q LETY ++ TV VL +A + Q+D+ +A+L+ DL E +
Sbjct: 1776 GFDQEEGIDYLETYSHVVRSATVR-----MVLHVATVMDWEVKQMDVKNAFLHGDLTETV 1830
Query: 639 YIRAPPHMNARNK---VLKLNKSLYGLKQSGANWCALIKQFLVE---ECGLIEDRFWKCV 692
Y+ P + K V L+K+LYGLKQ+ W +L+E C + + + +
Sbjct: 1831 YMLQPAGFVNKEKPTHVCHLHKALYGLKQAPRAWFDKFSNYLLEFGFNCSIKDPSLF--I 1888
Query: 693 FTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTK 734
+ L L++ L+VDDM++ G N +I+ + L+ +F K
Sbjct: 1889 YLKGNDLILLL-LYVDDMVLTGSNSATMIKLLEDLNTQFRMK 1929
Score = 63.5 bits (153), Expect = 2e-09
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 35/206 (16%)
Query: 532 AYKKEIAQLTKMHTWSEELIDATLIP---KQRIINSMFIFTTKRD-----NSKKCRLVAR 583
A +E T+ TWS L+P ++ S ++F TK + + K RLVA+
Sbjct: 823 AMHEEYDNCTEAQTWS-------LVPYTSDMNVLGSKWVFRTKLNADGSLDKLKARLVAK 875
Query: 584 GDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEEL 638
G Q LETY ++ TV VL +A + Q+D+ +A+L+ DL E +
Sbjct: 876 GFDQEEGIDYLETYSHVVRSATVR-----MVLHVATVMDWEVKQMDVKNAFLHGDLTETV 930
Query: 639 YIRAPPHMNARNK---VLKLNKSLYGLKQSGANWCALIKQFLVE---ECGLIEDRFWKCV 692
Y+ P + K V L+K+LYGLKQ+ W +L+E C + + + +
Sbjct: 931 YMLQPAGFVNKEKPTHVCHLHKALYGLKQAPRAWFDKFSNYLLEFGFNCSIKDPSLF--I 988
Query: 693 FTAKEPLKLVVCLFVDDMLVVGRNDE 718
+ L +++ L+VDDM V+ N+E
Sbjct: 989 YLKGNDL-ILLLLYVDDM-VLTENEE 1012
>At1g36620 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1152
Score = 73.6 bits (179), Expect = 2e-12
Identities = 62/201 (30%), Positives = 105/201 (51%), Gaps = 25/201 (12%)
Query: 529 FQNAYKKEIAQLTKMHTWSEELIDATLIPKQ-RIINSMFIFTTKRDNSK-----KCRLVA 582
++NA E+ L TW D T +P+ + I S ++F K +++ K RLVA
Sbjct: 947 WRNAVFFEVDALEDQGTW-----DITKLPQGVKAIGSKWVFRIKYNSNGTVERYKARLVA 1001
Query: 583 RGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEE 637
G+ Q +T+ P K TV L+ +A A D L Q+D+ +A+L+ DLKE+
Sbjct: 1002 LGNHQKEGIDFTKTFAPVVKMQTVR---LLLDVAAAKDWEL--HQMDVHNAFLHGDLKED 1056
Query: 638 LYIRAPPHMNARNK--VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTA 695
+Y++ PP + V KL KS+YGLKQ+ W + L+ + G + + +FT+
Sbjct: 1057 IYMKPPPGFKTTDPSLVCKLKKSIYGLKQAPRCWFEKLSTSLL-KFGFTQSKKDYSLFTS 1115
Query: 696 KEPLKLV-VCLFVDDMLVVGR 715
K++ V ++VDD+++ G+
Sbjct: 1116 IRGSKVLHVIVYVDDVVICGK 1136
>At1g43715 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 729
Score = 72.4 bits (176), Expect = 3e-12
Identities = 134/622 (21%), Positives = 238/622 (37%), Gaps = 87/622 (13%)
Query: 429 EVFESIERDPF-NLTSQKRPRSSNTYRESDQDSYDSGGDFDEEQEQECSSDNSPARPPNK 487
E ES + P N +S R+++T S S S E E SS PA P +
Sbjct: 68 ECTESTDLLPIGNNSSLLSNRTNHTDTSSASSSTASSPSVPVVSESETSS-TMPAAPATQ 126
Query: 488 RIRRVNYVHAIEHTKGIMQMNTSINYSEAISRNRNENEKLAFQN--------AYKKEIAQ 539
+ KGI++ N Y + +N K + A +E
Sbjct: 127 STHPM----VTRSKKGIIKPNP--RYGLLTHKVKNAEPKTVTEALKHPGWTAAMHEEYDN 180
Query: 540 LTKMHTWSEELIDATLIPKQRIINSMFIFTTKRD-----NSKKCRLVARG-DQQSLETYD 593
+ TWS L+ T P ++ S ++F TK + + K RLVA+G DQ+ + +D
Sbjct: 181 CQEAQTWS--LVPYT--PDMNVLGSKWVFQTKLNADGSLDKLKARLVAKGFDQEEVMGWD 236
Query: 594 PDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMNARNK-- 651
Q +D+ +A+L+ DL E +Y+ P +NK
Sbjct: 237 VKQ--------------------------MDVKNAFLHGDLTETVYMLQPAGFVDKNKPT 270
Query: 652 -VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVCLFVDDM 710
V L+K+LYGLKQ+ W +L+E + K +++ L+VDDM
Sbjct: 271 HVCHLHKALYGLKQAPRAWFDKFSNYLLEFGFSCSVKDLSLFIYIKGNDLILLLLYVDDM 330
Query: 711 LVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYMKFGMQ 770
++ G + + + + L+ F R +D + LG++ + + + Q
Sbjct: 331 VLTGNSSATLAKLLEDLNIHF----------RMKDLGQMHYFLGIQAHFHENG-LFLSQQ 379
Query: 771 KSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKV----KHLQRLVG 826
K ED L + S P +P L L+ +++++ + + LVG
Sbjct: 380 KYAEDLLTIAAMEDCS-PMPTPLP------------LQLNKVPHQEELFSSPTYFRSLVG 426
Query: 827 LASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKNN 886
Y+ R ++ + VN + P+ + ++ +Y+ T + +S +
Sbjct: 427 KLQYL-TLIRPDLQFSVNYVCLKMHQPTVSDYNLLKRILRYVKGTLAMGI--HFSKNSDF 483
Query: 887 EITAISDAAFAGNNDFKSQSGALYLWNG-KTIAAKSSKIKLTCVSSTEAEIYSISNCVTY 945
++ A ++ +DF Q+ W K + A I SSTEAE S+S
Sbjct: 484 QLRAYNEKEPETESDFNLQAYTDSDWVAVKKLVALQEAIPTVSRSSTEAENRSLSETAQE 543
Query: 946 LRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELGL 1005
+ I ++ +L ++ + + KH +R+ L
Sbjct: 544 MTWICHVLRELGIPLTVTPELYGDNLSSVYLTANHVFHVRSKHFEFDYHYVRERVALGSL 603
Query: 1006 VLEYIPTKENTADILTKPLSMK 1027
V+++IP + D+ TK LS K
Sbjct: 604 VVKHIPAHQQIVDMFTKSLSFK 625
>At1g47520 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 634
Score = 71.2 bits (173), Expect = 8e-12
Identities = 85/338 (25%), Positives = 148/338 (43%), Gaps = 50/338 (14%)
Query: 577 KCRLVARGDQQS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLY 631
K RLV +G Q +T+ P K TV L L ++ QLDIS+A+L
Sbjct: 328 KARLVFKGYTQKEGLDYTDTFSPVAKMATVKLL-----LKVSASKQWFLNQLDISNAFLN 382
Query: 632 ADLKEELYIRAPP-HMNAR------NKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLI 684
DL+E +Y++ P + +++ N V +L KS+YGLKQ+ W ++ LV + G +
Sbjct: 383 GDLEETIYMKLPEGYADSKGDSLPPNAVCRLKKSIYGLKQASRQWFKKLRNALV-QLGFV 441
Query: 685 EDR-----FWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDG 739
+ F +C T + ++VDD+++ + + + L + F +
Sbjct: 442 KGHGDHTLFLRCFGTE----FIAALVYVDDIVIASTTETAATQLTNALKESFRLR----- 492
Query: 740 NHREEDGVNEYDILGVELEYKKGEYMKFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGD 799
E G +Y LG+E+ + E + +K + L G+ H P P
Sbjct: 493 ----ELGPLKY-FLGLEVA-RTSEGISLCQRKYALELLTSTGMLDCQH---SSTPMIPNL 543
Query: 800 YISSGEDLTLDDQDYKDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLD 859
++S + L+D++Y +RLVG Y+ R +I + VN L Q+ P L
Sbjct: 544 HLSKSDGELLEDKEY------YRRLVGRLMYLTIT-RPDITFAVNKLCQYSSTPRTAHLQ 596
Query: 860 RAAQLCQYLWDTRDKKLIWKYSGPKNNEITAISDAAFA 897
++ QY+ T + L YS + + +D+ +A
Sbjct: 597 AVYKVLQYIKGTIGQGLF--YSADPDLTLKGFADSDWA 632
>At1g34100_1 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 405
Score = 70.5 bits (171), Expect = 1e-11
Identities = 60/195 (30%), Positives = 98/195 (49%), Gaps = 30/195 (15%)
Query: 535 KEIAQLTKMHTWSEELIDATLIPKQ---RIINSMFIFTTKRD-----NSKKCRLVARGDQ 586
+E L K TWS L+PK IINS++++ K + + K RLVA G
Sbjct: 33 EEYDALIKTKTWS-------LVPKPAGTNIINSIWLYKHKYNADGSLSRYKSRLVANGKS 85
Query: 587 QS-----LETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIR 641
Q ET+ P K T+ VL A++ + + QLD+ +A+L+ L+E +Y+
Sbjct: 86 QEHGVDFYETFSPVVKPATIR-----AVLNFAVERDSSVHQLDVQNAFLHGKLEETVYMY 140
Query: 642 APP-HMNARNK--VLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEP 698
PP ++ +N V KLNK+LYG KQ+ W A + V+ G + + +F K+
Sbjct: 141 EPPGFVDNKNPGYVCKLNKALYGFKQAPRAWNARFASY-VKMMGFKQSKCDASLFVYKQG 199
Query: 699 LKLV-VCLFVDDMLV 712
+ + L+VDD+++
Sbjct: 200 NDMAYLLLYVDDIML 214
>At4g04440 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 570
Score = 68.2 bits (165), Expect = 6e-11
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 577 KCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKE 636
K RLVARG Q + A V H ++ ++++ +L Q+D+ +A+L+ DL +
Sbjct: 215 KARLVARGFTQRKGIDYDEVFAPVVKHTSIRVLMSIVAQDDLELEQMDVKTAFLHGDLDK 274
Query: 637 ELYIRAPPHM---NARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVF 693
LY+ P ++++V L KSLYGLKQ+ W F++++ D CV+
Sbjct: 275 PLYMEQPEGYVVDESKDQVCLLKKSLYGLKQAPRQWNKKFNSFIMDQNFTRSDHD-SCVY 333
Query: 694 TAK-EPLKLV-VCLFVDDMLVVGRNDEHIIEFISKLSKRFDTK 734
+ P + V + L+VD ML+V ++ I + LS+ F+ K
Sbjct: 334 IKEVNPDEYVYLLLYVDGMLLVAKSMVEINKIKEALSQGFEMK 376
>At4g04380 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 778
Score = 65.5 bits (158), Expect = 4e-10
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 590 ETYDPDQKATT--VHHLALMTVLAMALDHNLTAFQLDISSAYLYADLKEELYIRAPPHMN 647
E Y + TT V H+++ +L++ NL QLD+ +A+ + +LKE++Y+ P
Sbjct: 620 EDYFAETLYTTEDVKHVSIRILLSIVAQKNLELEQLDVETAFFHGELKEKIYMMPPEGFE 679
Query: 648 A---RNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDRFWKCVFTAKEPLKLVVC 704
+ N+V LNKSLYGLKQ+ W ++ E G + C + +
Sbjct: 680 SLFKENEVCLLNKSLYGLKQAPRQWNEKFDHYMT-EIGFKRSDYDSC-------STMYLL 731
Query: 705 LFVDDMLVVGRNDEHIIEFISKLSKRFDTK 734
L+V DMLV N + I +LS + + K
Sbjct: 732 LYVYDMLVAANNMQAIDALKKELSNKLEMK 761
>At2g04490 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1015
Score = 62.4 bits (150), Expect = 4e-09
Identities = 43/105 (40%), Positives = 54/105 (50%), Gaps = 17/105 (16%)
Query: 577 KCRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYLY 631
K RLVA+G Q +T+ P K TTV T+LA+A + QLDIS+A+L
Sbjct: 691 KARLVAKGYTQQEGVDFEDTFSPVAKMTTVK-----TLLAVAAAKKWSLHQLDISNAFLN 745
Query: 632 ADLKEELYIRAPPHMNAR-------NKVLKLNKSLYGLKQSGANW 669
DL EE+Y+ P + N V KL KSLYGLKQ W
Sbjct: 746 RDLYEEIYMNLAPGYTPKEGEEIPPNAVCKLKKSLYGLKQDSRQW 790
>At4g04600 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 922
Score = 60.8 bits (146), Expect = 1e-08
Identities = 42/147 (28%), Positives = 74/147 (49%), Gaps = 16/147 (10%)
Query: 622 QLDISSAYLYADLKEELYIRAPPHMNA---RNKVLKLNKSLYGLKQSGANWCALIKQFLV 678
Q+D+ +A+L+ +L + LY+ P A +++V L KSLYGLKQ+ W F++
Sbjct: 596 QMDVKTAFLHGELDQVLYMEQPEGFEADPNKDQVCLLKKSLYGLKQAPRQWNKKFNAFMM 655
Query: 679 EECGLIEDRFWKCVFTAK-EPLKLVVCL-FVDDMLVVGRNDEHIIEFISKLSKRFDTKVV 736
++ G CV+ + P + V L +VDDML+ G++ + + LS F+ K +
Sbjct: 656 DQ-GFTRSLHDSCVYVKEVSPDQFVYLLVYVDDMLIAGKSMAEVNKVKEGLSLNFEMKDM 714
Query: 737 NDGNHREEDGVNEYDILGVELEYKKGE 763
+ ILG+++E + E
Sbjct: 715 GAASR----------ILGIDIERNREE 731
>At1g36110 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 745
Score = 59.3 bits (142), Expect = 3e-08
Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 459 DSYDSGGDFDEEQEQECSSDNSPARPPNKRIRRVNYVHAIEHTKGIMQMNTSINYSEAIS 518
D +D D E + S+ S P RR Q N ++ I
Sbjct: 445 DGFDENNDIHVEDDHVSSNMGSGELTPPSTPRRSE-----------RQKNKPCYLNDYIM 493
Query: 519 RNRNENEKLAFQ-NAYKKEIAQLTKMHTWSEEL-IDATLIPKQRIINSMFIFTTKRD--- 573
E E+L N + + ++ W E + A + P I ++F TK++
Sbjct: 494 LAELEIERLLMTINEEPWDYIEAKELREWREAFELPAGVKP----IGLKWVFKTKQNSDG 549
Query: 574 --NSKKCRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDIS 626
N K RLVA+G Q E + P + TV ++A+A + LD+
Sbjct: 550 SINKYKARLVAKGYVQRHGIDFDEVFAPVARIETVR-----LIIALAASNGWEIHHLDVK 604
Query: 627 SAYLYADLKEELYIRAPPHMNARN---KVLKLNKSLYGLKQSGANWCALIKQFLVE 679
+A+L+ +LKE +Y+ P + KV KLNK+LYGLKQ+ W + L E
Sbjct: 605 TAFLHGELKEVVYVTQPEGYVTKGNEEKVYKLNKALYGLKQAPRAWNNKLNSILKE 660
>At2g21310 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 838
Score = 58.5 bits (140), Expect = 5e-08
Identities = 72/325 (22%), Positives = 136/325 (41%), Gaps = 18/325 (5%)
Query: 706 FVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYKKGEYM 765
F+DD+ +N E + E +LS F+ K + ILG+E+ + E +
Sbjct: 519 FIDDL--TRKNKETVKELKERLSSEFEMKDLGPARK----------ILGMEITRNREENI 566
Query: 766 KFGMQKSLEDKLPHLGVPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDYKDKVKHLQRLV 825
Q+S K+ L + K P P + + ++Q + K V
Sbjct: 567 LELSQRSYLQKV--LKTFRMDECKPVKTPLAPHMKFVAATETEAEEQADQMKSIPYANAV 624
Query: 826 GLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDKKLIWKYSGPKN 885
G Y R ++ + V ++++ P + +Y+ + D +L +K G +
Sbjct: 625 GSIMYSMIGSRPDLAHPVGVISRFMSKPLMNHWLGVKWVLRYIKGSIDSRLQYKREG--D 682
Query: 886 NEITAISDAAFAGNND-FKSQSGALYLWNGKTIAAKSSKIKLTCVSSTEAEIYSISNCVT 944
+T D+ +G+ D +S +G + G ++ +S + +SSTEAE +++
Sbjct: 683 FVVTGYCDSDHSGDRDRSRSTTGYTFTVGGNIVSWRSCLQPVVALSSTEAEYIALTEAAK 742
Query: 945 YLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLKKHTGSRAMRIRDECNELG 1004
++ L+++L + + + DSQ A+A+ K E KH R IRD +
Sbjct: 743 EAYWLKDLMNELGFKQGAVDIHCDSQSAIALAKNAVHHE-RTKHIQRRFHYIRDAITDGE 801
Query: 1005 LVLEYIPTKENTADILTKPLSMKLF 1029
+ + I T N +DI TK + + F
Sbjct: 802 VKVLKISTVHNPSDIFTKVVPVNKF 826
>At1g47360 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1182
Score = 58.2 bits (139), Expect = 7e-08
Identities = 57/221 (25%), Positives = 104/221 (46%), Gaps = 11/221 (4%)
Query: 811 DQDYKDKVKHLQRLVGLASYVGHKF------RFEILYYVNILAQHQLYPSAKVLDRAAQL 864
+++YK++ + + R V A+ VG R ++ Y ++++++ P A +
Sbjct: 949 EEEYKNQFERM-RFVPYANTVGSIMYSMIGTRPDLAYPLDVISRFMSKPLKDHWQAAKWV 1007
Query: 865 CQYLWDTRDKKLIWKYSGPKNNEITAISDAAFAGNNDFK-SQSGALYLWNGKTIAAKSSK 923
+Y+ T KKL Y + + D+ + N D + S SG ++ G TI KS
Sbjct: 1008 LRYMKGTETKKLC--YMKQDDFLLRGYCDSDYGSNFDTRRSISGYVFTIGGNTIIWKSKL 1065
Query: 924 IKLTCVSSTEAEIYSISNCVTYLRGIEILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAE 983
K+ +S+TE+E +++ V ++ L ++L + +++ DSQ +A+ K E
Sbjct: 1066 QKVVALSTTESEYMALTEAVKEALWLKGLANELGFPQKDVEVHCDSQSVIALAKNSVHHE 1125
Query: 984 FLKKHTGSRAMRIRDECNELGLVLEYIPTKENTADILTKPL 1024
KH +RD E + L I ++ NTADI TK L
Sbjct: 1126 -NTKHIDIMLHFVRDVITEGKIRLVKIASECNTADIFTKVL 1165
>At2g05960 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1200
Score = 54.7 bits (130), Expect = 7e-07
Identities = 58/247 (23%), Positives = 99/247 (39%), Gaps = 73/247 (29%)
Query: 521 RNENEKLAFQNAYKKEIAQLTKMHTWSEELIDATLIPKQRIINSMFIFTTKRDNS----- 575
+ N+ +++A +EI + K TWS + + P I ++F KR++
Sbjct: 789 KEANKYREWRDACDEEIKSIIKNRTWSLVSLPVGIKP----IGLKWVFKIKRNSDGNITK 844
Query: 576 KKCRLVARGDQQSL-----ETYDPDQKATTVHHLALMTVLAMALDHNLTAFQLDISSAYL 630
K RLVA+G Q E + P + TV ++A+A + LD+ +A+L
Sbjct: 845 HKARLVAKGYVQKHVVDFDEVFAPVARIETVRF-----IIALAASNGWEVHHLDVKTAFL 899
Query: 631 YADLKEELYIRAPPHM---NARNKVLKLNKSLYGLKQSGANWCALIKQFLVEECGLIEDR 687
+ +LKE +Y+ P + KV KL+K+LY
Sbjct: 900 HGELKENVYVTQPEGFVTKGSEEKVYKLHKALY--------------------------- 932
Query: 688 FWKCVFTAKEPLKLVVCLFVDDMLVVGRNDEHIIEFISKLSKRFD-------TKVVNDGN 740
++VDD+LV G + + I +F +SK F+ T +
Sbjct: 933 -----------------VYVDDLLVTGSSPKLIDDFKKGMSKNFEMSDLGRLTYYLGIEV 975
Query: 741 HREEDGV 747
+EEDG+
Sbjct: 976 TQEEDGI 982
>At1g34090 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 761
Score = 52.0 bits (123), Expect = 5e-06
Identities = 73/342 (21%), Positives = 142/342 (41%), Gaps = 42/342 (12%)
Query: 701 LVVCLFVDDMLVVGRNDEHIIEFISKLSKRFDTKVVNDGNHREEDGVNEYDILGVELEYK 760
+++ L+VDDM + G + + + +L+K+F R +D + LG++ Y
Sbjct: 325 ILLLLYVDDMAITGNSSTALSNLLDELNKQF----------RMKDMGKLHYFLGIQAHYH 374
Query: 761 KGEYMKFGMQKSLEDKLPHLG------VPLYSHPRQRKVPGCPGDYISSGEDLTLDDQDY 814
G + QK +ED L +P + KVP D+ +
Sbjct: 375 SGG-LFLSQQKYVEDLLITASMADCAPMPTPLPLQLNKVPN--------------QDEQF 419
Query: 815 KDKVKHLQRLVGLASYVGHKFRFEILYYVNILAQHQLYPSAKVLDRAAQLCQYLWDTRDK 874
D+ ++ + L G Y+ R +I + VN + Q P+ ++ +Y+ T
Sbjct: 420 SDQ-RYFRSLAGKLQYL-TLTRPDIQFAVNYVCQKMHSPTVSDYHLLKRILRYVKGTTTM 477
Query: 875 KLIWKYSGPKNNEITAISDAAFAG-NNDFKSQSGALYLWNGKTIAAKSSKIKLTCVSSTE 933
+ ++ + + A SD+ + G +S +G + I+ S K + SSTE
Sbjct: 478 GI--SFAKDTDCTVRAYSDSDYGGCKRTRRSTAGFCTFFGSNIISWCSQKQETVARSSTE 535
Query: 934 AEIYSISNCVTYLRGI-EILVDKLLNTKSIIKLKTDSQPAMAIIKRKEDAEFLK--KHTG 990
AE ++S+ + + ++L + + + +L D+ ++ I + F K KH
Sbjct: 536 AEYRALSDAAAEITWLCKVLKELQIPLHTAPELYADN---LSSIYLTANPSFHKRSKHFE 592
Query: 991 SRAMRIRDECNELGLVLEYIPTKENTADILTKPLSMKLFKLL 1032
+ +R+ L +++IP+ ADI TK L + F L
Sbjct: 593 THYHYVRERVALGSLTVKHIPSHVQLADIFTKSLPVGAFTTL 634
>At2g10610 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 767
Score = 51.2 bits (121), Expect = 8e-06
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 566 FIFTTKRD-----NSKKCRLVARGDQQSLETYDPDQKATTVHHLALMTVLAMALDHNLTA 620
++F KR+ N K RLVA+G Q + A + ++ +A H+
Sbjct: 474 WVFKLKRNSDGSINKYKGRLVAKGYVQKYGVDFEEAFAPVARIETIRLLIDLAAAHSWEI 533
Query: 621 FQLDISSAYLYADLKEELYI---RAPPHMNARNKVLKLNKSLYGLKQSGANWCALIKQFL 677
LD+ +A+L+ +LKE +Y+ +KV KL K+LYGL+Q+ W + L
Sbjct: 534 HHLDVKTAFLHEELKEIVYVLQLEGFEKFGKEDKVYKLKKALYGLRQALRAWNNKLNHIL 593
Query: 678 VE 679
VE
Sbjct: 594 VE 595
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,833,861
Number of Sequences: 60738
Number of extensions: 3277734
Number of successful extensions: 10202
Number of sequences better than 1.0e-05: 127
Number of HSP's better than 0.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 9500
Number of HSP's gapped (non-prelim): 339
length of query: 1038
length of database: 30,389,216
effective HSP length: 117
effective length of query: 921
effective length of database: 23,282,870
effective search space: 21443523270
effective search space used: 21443523270
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)