ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactI3159 good R KOG0017 General function prediction only FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactI3159 1059383 1058328 -352
(352 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR343c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 203 4e-52
YOR192c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 203 4e-52
YLR410w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 203 4e-52
YGR161w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 203 4e-52
YFL002w-a [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 203 4e-52
YDR261w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 203 4e-52
YDR210w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 203 4e-52
YDR034c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 203 4e-52
YCL019w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 203 4e-52
YBL101w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 203 4e-52
YDR365w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 182 8e-46
YPR158w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YPR158c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YPL257w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YLR227w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YJR027w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 181 1e-45
YGR027w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YDR316w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YDR261c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YDR210w-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YPR137c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YOR142w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YOL103w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YMR050c [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 181 1e-45
YMR045c [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 181 1e-45
YML045w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 181 1e-45
YJR029w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 181 1e-45
YHR214c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YGR161c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YER160c [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 181 1e-45
YER138c [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 181 1e-45
YBL005w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 1e-45
YLR157c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 181 2e-45
YBR012w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 180 2e-45
YGR038c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 179 7e-45
YDR098c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 179 7e-45
YNL284c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 178 9e-45
YML039w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 176 6e-44
YLR035c-a [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 143 4e-34
YAR009c [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 137 2e-32
YHL009w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 106 4e-23
YJL113w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 106 6e-23
At2g07550 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 85 1e-16
At3g45520 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 80 4e-15
At3g61330 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 80 6e-15
At1g58140 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 80 6e-15
At1g11265 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 80 6e-15
At4g10460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 79 1e-14
At1g48710 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 77 4e-14
At3g59720 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 76 6e-14
At2g05960 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 74 4e-13
At4g04380 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 72 1e-12
At1g32590 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 71 3e-12
At2g21460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 70 5e-12
At2g16000 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 68 2e-11
At3g29775 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 67 4e-11
At1g31210 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 67 4e-11
At1g56675 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 66 9e-11
At1g37110 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 65 1e-10
At4g03810 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 65 2e-10
At1g27285 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 65 2e-10
At3g25450 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 64 3e-10
At1g36035 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 64 3e-10
At2g17490 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 64 4e-10
At5g35820 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 62 1e-09
At1g47650_1 [R] KOG0017 FOG: Transposon-encoded proteins with TY... 62 1e-09
At2g10610 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 62 1e-09
At2g20460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 60 4e-09
At4g16870 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 60 5e-09
At2g13930 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 60 5e-09
At2g11950 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 60 5e-09
At3g60170 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 59 1e-08
At2g23330 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 59 1e-08
At2g14930 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 59 1e-08
At2g07420 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 59 1e-08
At2g15650 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 58 2e-08
At1g57640 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 58 2e-08
At2g24660 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 57 3e-08
At4g02960 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 57 4e-08
At1g59265 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 57 4e-08
At1g58889 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 57 4e-08
At4g22040 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 57 5e-08
At4g10690 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 57 5e-08
At2g07010 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 57 5e-08
At2g13940 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 55 1e-07
At2g06950 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 55 1e-07
At1g43886 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 55 1e-07
At2g15870 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 54 3e-07
At2g05390 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 54 3e-07
At1g44510 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 54 3e-07
At1g70010 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 54 3e-07
At2g16670 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 53 6e-07
At1g53810 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 53 8e-07
At1g36620 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 53 8e-07
At4g21360 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 52 1e-06
At4g14460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 52 1e-06
At4g28900 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 52 2e-06
At4g04280 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 51 3e-06
At2g15700 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 51 3e-06
At2g11230 [R] KOG0017 FOG: Transposon-encoded proteins with TYA ... 50 7e-06
>YOR343c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 203 bits (516), Expect = 4e-52
Identities = 100/286 (34%), Positives = 168/286 (57%), Gaps = 3/286 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L+IDSGA+ ++V LH+ P+++ + D Q+ I + GNL F+ K ++A+
Sbjct: 454 LLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL 513
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH-- 174
+T +++ +++S + L N I + L G +A + + G W+ ++ H
Sbjct: 514 HTPNIAYDLLSLSELTNQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHIS 573
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
+ TI+ ++ + N++ +HR GH N + I++S++K + LKE D++W+ S++QC
Sbjct: 574 KLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 633
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y + Y PF+YLHTD+FGP+ P YFI+FTDE TRF
Sbjct: 634 PDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRF 693
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
+W YPL+ + E +++ F I+ +K+QF RV IQMDRGSE+TN
Sbjct: 694 QWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTN 739
>YOR192c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 203 bits (516), Expect = 4e-52
Identities = 100/286 (34%), Positives = 168/286 (57%), Gaps = 3/286 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L+IDSGA+ ++V LH+ P+++ + D Q+ I + GNL F+ K ++A+
Sbjct: 454 LLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL 513
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH-- 174
+T +++ +++S + L N I + L G +A + + G W+ ++ H
Sbjct: 514 HTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHIS 573
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
+ TI+ ++ + N++ +HR GH N + I++S++K + LKE D++W+ S++QC
Sbjct: 574 KLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 633
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y + Y PF+YLHTD+FGP+ P YFI+FTDE TRF
Sbjct: 634 PDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRF 693
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
+W YPL+ + E +++ F I+ +K+QF RV IQMDRGSE+TN
Sbjct: 694 QWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTN 739
>YLR410w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 203 bits (516), Expect = 4e-52
Identities = 100/286 (34%), Positives = 168/286 (57%), Gaps = 3/286 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L+IDSGA+ ++V LH+ P+++ + D Q+ I + GNL F+ K ++A+
Sbjct: 454 LLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL 513
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH-- 174
+T +++ +++S + L N I + L G +A + + G W+ ++ H
Sbjct: 514 HTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHIS 573
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
+ TI+ ++ + N++ +HR GH N + I++S++K + LKE D++W+ S++QC
Sbjct: 574 KLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 633
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y + Y PF+YLHTD+FGP+ P YFI+FTDE TRF
Sbjct: 634 PDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRF 693
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
+W YPL+ + E +++ F I+ +K+QF RV IQMDRGSE+TN
Sbjct: 694 QWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTN 739
>YGR161w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 203 bits (516), Expect = 4e-52
Identities = 100/286 (34%), Positives = 168/286 (57%), Gaps = 3/286 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L+IDSGA+ ++V LH+ P+++ + D Q+ I + GNL F+ K ++A+
Sbjct: 454 LLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL 513
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH-- 174
+T +++ +++S + L N I + L G +A + + G W+ ++ H
Sbjct: 514 HTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHIS 573
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
+ TI+ ++ + N++ +HR GH N + I++S++K + LKE D++W+ S++QC
Sbjct: 574 KLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 633
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y + Y PF+YLHTD+FGP+ P YFI+FTDE TRF
Sbjct: 634 PDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRF 693
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
+W YPL+ + E +++ F I+ +K+QF RV IQMDRGSE+TN
Sbjct: 694 QWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTN 739
>YFL002w-a [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 203 bits (516), Expect = 4e-52
Identities = 100/286 (34%), Positives = 168/286 (57%), Gaps = 3/286 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L+IDSGA+ ++V LH+ P+++ + D Q+ I + GNL F+ K ++A+
Sbjct: 454 LLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL 513
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH-- 174
+T +++ +++S + L N I + L G +A + + G W+ ++ H
Sbjct: 514 HTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHIS 573
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
+ TI+ ++ + N++ +HR GH N + I++S++K + LKE D++W+ S++QC
Sbjct: 574 KLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 633
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y + Y PF+YLHTD+FGP+ P YFI+FTDE TRF
Sbjct: 634 PDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRF 693
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
+W YPL+ + E +++ F I+ +K+QF RV IQMDRGSE+TN
Sbjct: 694 QWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTN 739
>YDR261w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 203 bits (516), Expect = 4e-52
Identities = 100/286 (34%), Positives = 168/286 (57%), Gaps = 3/286 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L+IDSGA+ ++V LH+ P+++ + D Q+ I + GNL F+ K ++A+
Sbjct: 454 LLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL 513
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH-- 174
+T +++ +++S + L N I + L G +A + + G W+ ++ H
Sbjct: 514 HTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHIS 573
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
+ TI+ ++ + N++ +HR GH N + I++S++K + LKE D++W+ S++QC
Sbjct: 574 KLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 633
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y + Y PF+YLHTD+FGP+ P YFI+FTDE TRF
Sbjct: 634 PDCLIGKSTKHRHIKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRF 693
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
+W YPL+ + E +++ F I+ +K+QF RV IQMDRGSE+TN
Sbjct: 694 QWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTN 739
>YDR210w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 203 bits (516), Expect = 4e-52
Identities = 100/286 (34%), Positives = 168/286 (57%), Gaps = 3/286 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L+IDSGA+ ++V LH+ P+++ + D Q+ I + GNL F+ K ++A+
Sbjct: 454 LLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL 513
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH-- 174
+T +++ +++S + L N I + L G +A + + G W+ ++ H
Sbjct: 514 HTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHIS 573
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
+ TI+ ++ + N++ +HR GH N + I++S++K + LKE D++W+ S++QC
Sbjct: 574 KLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 633
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y + Y PF+YLHTD+FGP+ P YFI+FTDE TRF
Sbjct: 634 PDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRF 693
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
+W YPL+ + E +++ F I+ +K+QF RV IQMDRGSE+TN
Sbjct: 694 QWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTN 739
>YDR034c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 203 bits (516), Expect = 4e-52
Identities = 100/286 (34%), Positives = 168/286 (57%), Gaps = 3/286 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L+IDSGA+ ++V LH+ P+++ + D Q+ I + GNL F+ K ++A+
Sbjct: 454 LLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL 513
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH-- 174
+T +++ +++S + L N I + L G +A + + G W+ ++ H
Sbjct: 514 HTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHIS 573
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
+ TI+ ++ + N++ +HR GH N + I++S++K + LKE D++W+ S++QC
Sbjct: 574 KLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 633
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y + Y PF+YLHTD+FGP+ P YFI+FTDE TRF
Sbjct: 634 PDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRF 693
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
+W YPL+ + E +++ F I+ +K+QF RV IQMDRGSE+TN
Sbjct: 694 QWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTN 739
>YCL019w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 203 bits (516), Expect = 4e-52
Identities = 100/286 (34%), Positives = 168/286 (57%), Gaps = 3/286 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L+IDSGA+ ++V LH+ P+++ + D Q+ I + GNL F+ K ++A+
Sbjct: 454 LLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL 513
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH-- 174
+T +++ +++S + L N I + L G +A + + G W+ ++ H
Sbjct: 514 HTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHIS 573
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
+ TI+ ++ + N++ +HR GH N + I++S++K + LKE D++W+ S++QC
Sbjct: 574 KLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 633
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y + Y PF+YLHTD+FGP+ P YFI+FTDE TRF
Sbjct: 634 PDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRF 693
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
+W YPL+ + E +++ F I+ +K+QF RV IQMDRGSE+TN
Sbjct: 694 QWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTN 739
>YBL101w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1770
Score = 203 bits (516), Expect = 4e-52
Identities = 100/286 (34%), Positives = 168/286 (57%), Gaps = 3/286 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L+IDSGA+ ++V LH+ P+++ + D Q+ I + GNL F+ K ++A+
Sbjct: 454 LLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL 513
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH-- 174
+T +++ +++S + L N I + L G +A + + G W+ ++ H
Sbjct: 514 HTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHIS 573
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
+ TI+ ++ + N++ +HR GH N + I++S++K + LKE D++W+ S++QC
Sbjct: 574 KLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 633
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y + Y PF+YLHTD+FGP+ P YFI+FTDE TRF
Sbjct: 634 PDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRF 693
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
+W YPL+ + E +++ F I+ +K+QF RV IQMDRGSE+TN
Sbjct: 694 QWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTN 739
>YDR365w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 182 bits (461), Expect = 8e-46
Identities = 93/295 (31%), Positives = 157/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVQYGDFYWVSKRYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ + P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPNSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YPR158w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1756
Score = 181 bits (460), Expect = 1e-45
Identities = 93/296 (31%), Positives = 157/296 (52%), Gaps = 3/296 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKKE 350
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K+
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKK 753
>YPR158c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (460), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVQYGDFYWVSKRYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YPL257w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (460), Expect = 1e-45
Identities = 93/295 (31%), Positives = 157/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ + P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPNSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YLR227w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (460), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVQYGDFYWVSKRYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YJR027w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (460), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVQYGDFYWVSKRYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YGR027w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (460), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVQYGDFYWVSKRYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YDR316w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (460), Expect = 1e-45
Identities = 93/295 (31%), Positives = 157/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ + P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPNSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YDR261c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1604
Score = 181 bits (460), Expect = 1e-45
Identities = 93/295 (31%), Positives = 157/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ + P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPNSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YDR210w-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (460), Expect = 1e-45
Identities = 93/295 (31%), Positives = 157/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ + P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPNSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YPR137c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YOR142w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YOL103w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YMR050c [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YMR045c [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YML045w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YJR029w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YHR214c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1793
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 496 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 555
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 556 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 615
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 616 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 675
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 676 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 735
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 736 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 790
>YGR161c-d [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YER160c [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YER138c [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YBL005w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (459), Expect = 1e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YLR157c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 181 bits (458), Expect = 2e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAPTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ + P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPNSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YBR012w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1756
Score = 180 bits (457), Expect = 2e-45
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSLKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YGR038c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 179 bits (453), Expect = 7e-45
Identities = 92/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPGINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ + P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPNSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YDR098c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 179 bits (453), Expect = 7e-45
Identities = 92/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPGINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ + P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPNSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YNL284c-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 178 bits (452), Expect = 9e-45
Identities = 92/295 (31%), Positives = 155/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPGINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVDW+ +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YML039w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1755
Score = 176 bits (445), Expect = 6e-44
Identities = 92/295 (31%), Positives = 155/295 (52%), Gaps = 3/295 (1%)
Query: 58 LMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD-KVKVRAI 116
L++DSGA+ +++ +H+ + + D + D Q+ I + G+L F+ + K ++ +
Sbjct: 458 LLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVL 517
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP--YCHISKPH 174
+T +++ +++S L I + L G +A + + G W+ Y S
Sbjct: 518 HTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNIS 577
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
TI+ + ++ ++ +HR H N + IR S++ I E DVD + +QC
Sbjct: 578 VPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDRSSAIDYQC 637
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+FTDE T+F
Sbjct: 638 PDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKF 697
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN + +K
Sbjct: 698 RWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
>YLR035c-a [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1155
Score = 143 bits (360), Expect = 4e-34
Identities = 64/149 (42%), Positives = 89/149 (58%)
Query: 201 HINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYY 260
H N + IR S++ I E DVDW+ +QC CL K+ ++ H SR+ Y Y
Sbjct: 4 HANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNSYE 63
Query: 261 PFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLK 320
PF+YLHTD+FGP+ P YFI+FTDE T+FRW YPL+ + + ++D F I+ +K
Sbjct: 64 PFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIK 123
Query: 321 SQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
+QF V IQMDRGSE+TN + +K
Sbjct: 124 NQFQASVLVIQMDRGSEYTNRTLHKFLEK 152
>YAR009c [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1196
Score = 137 bits (346), Expect = 2e-32
Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Query: 169 HISKPHEQTISAISIRDAPNRFSLANVH--RWFGHINVKYIRESIRKGHIQGLKEDDVDW 226
H P+ +I +I ++ N L+ + R H ++Y S++ I E DVDW
Sbjct: 14 HQISPYPPSIMSIQVKVHANILILSFIECLRMPMHRQIRY---SLKNNTITYFNESDVDW 70
Query: 227 TGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIA 286
+ +QC CL K+ ++ H SR+ Y Y PF+YLHTD+FGP+ P YFI+
Sbjct: 71 SSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFIS 130
Query: 287 FTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAY 346
FTDE T+ RW YPL+ + + ++D F I+ +K+QF V IQMDRGSE+TN +
Sbjct: 131 FTDETTKLRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKF 190
Query: 347 SKK 349
+K
Sbjct: 191 LEK 193
>YHL009w-b [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1802
Score = 106 bits (265), Expect = 4e-23
Identities = 78/313 (24%), Positives = 149/313 (46%), Gaps = 29/313 (9%)
Query: 53 NPARDLMIDSGATISVVHDKSLLHNFNPSTDQQLFDT--QENQIRVEGEGNLILKFKKDK 110
N + ++ID+G+ +++ +DK+LLHN+ S F + + + V+G G + +K +
Sbjct: 406 NSKKLVIIDTGSGVNITNDKTLLHNYEDSNRSTRFFGIGKNSSVSVKGYGYIKIKNGHNN 465
Query: 111 VKVRAI---YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYE--LGSLCWI 165
+ + Y + +IS L +R+ +R G +I K+ + + +
Sbjct: 466 TDNKCLLTYYVPEEESTIISCYDLAKKTKMVLSRK---YTRLGNKIIKIKTKIVNGVIHV 522
Query: 166 PYCH-ISKPHEQT-ISAISIRDAPN------RFSLANVHRWFGHINVKYIRESIRKGHIQ 217
I +P + + I+AI +P +L + H+ GH ++ I SI+ H +
Sbjct: 523 KMNELIERPSDDSKINAIKPTSSPGFKLNKRSITLEDAHKRMGHTGIQQIENSIKHNHYE 582
Query: 218 G----LKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPI 273
+KE + W CQ C SKA + NHY S +++ ++ P D+FGP+
Sbjct: 583 ESLDLIKEPNEFW-------CQTCKISKATKRNHYTGSMNNHSTDHEPGSSWCMDIFGPV 635
Query: 274 RCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMD 333
++ +Y + D TR+ T ++K AE ++ + ++ + +++QF +VR I D
Sbjct: 636 SSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQIRKNIQYVETQFDRKVREINSD 695
Query: 334 RGSEFTNNMTRAY 346
RG+EFTN+ Y
Sbjct: 696 RGTEFTNDQIEEY 708
>YJL113w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1803
Score = 106 bits (264), Expect = 6e-23
Identities = 78/313 (24%), Positives = 149/313 (46%), Gaps = 29/313 (9%)
Query: 53 NPARDLMIDSGATISVVHDKSLLHNFNPSTDQQLFDT--QENQIRVEGEGNLILKFKKDK 110
N + ++ID+G+ +++ +DK+LLHN+ S F + + + V+G G + +K +
Sbjct: 407 NSKKLVIIDTGSGVNITNDKTLLHNYEDSNRSTRFFGIGKNSSVSVKGYGYIKIKNGHNN 466
Query: 111 VKVRAI---YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYE--LGSLCWI 165
+ + Y + +IS L +R+ +R G +I K+ + + +
Sbjct: 467 TDNKCLLTYYVPEEESTIISCYDLAKKTKMVLSRK---YTRLGNKIIKIKTKIVNGVIHV 523
Query: 166 PYCH-ISKPHEQT-ISAISIRDAPN------RFSLANVHRWFGHINVKYIRESIRKGHIQ 217
I +P + + I+AI +P +L + H+ GH ++ I SI+ H +
Sbjct: 524 KMNELIERPSDDSKINAIKPTSSPGFKLNKRSITLEDAHKRMGHTGIQQIENSIKHNHYE 583
Query: 218 G----LKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPI 273
+KE + W CQ C SKA + NHY S +++ ++ P D+FGP+
Sbjct: 584 ESLDLIKEPNEFW-------CQTCKISKATKRNHYTGSMNNHSTDHEPGSSWCMDIFGPV 636
Query: 274 RCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMD 333
++ +Y + D TR+ T ++K AE ++ + ++ + +++QF +VR I D
Sbjct: 637 SSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQVRKNIQYVETQFDRKVREINSD 696
Query: 334 RGSEFTNNMTRAY 346
RG+EFTN+ Y
Sbjct: 697 RGTEFTNDQIEEY 709
>At2g07550 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1356
Score = 85.1 bits (209), Expect = 1e-16
Identities = 77/294 (26%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDK--VKVRAI 116
++D+G + + + + H FN + + RV G G + +K V
Sbjct: 310 ILDTGCSYHMTYKREWFHEFNEDAGGSVRMGNKTVSRVRGVGTIRVKNSDGLTIVLTNVR 369
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFL-------ISRTGKRIAKLYELGSLCWIPYCH 169
Y DM N++S + AG ++ L + TG+R LY L W P
Sbjct: 370 YIPDMDRNLLSLGTFEKAGYKFESEDGILRIKAGNQVLLTGRRYDTLYLLN---WKPVA- 425
Query: 170 ISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGY 229
++++ + D + H+ H++ K + +RKG + K +D
Sbjct: 426 -----SESLAVVKRADDTVLW-----HQRLCHMSQKNMEILVRKGFLDKKKVSSLD---- 471
Query: 230 SSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFG-PIRCRSSYPPQYFIAFT 288
C+ C+ KAKR + + TKE EY+H+DL+G P S QYF++
Sbjct: 472 ---VCEDCIYGKAKRKSFSLAHHD--TKE--KLEYIHSDLWGAPFVPLSLGKCQYFMSII 524
Query: 289 DEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNM 342
D+ TR W Y + KT +E +KF E V +++Q RV+T++ D G EF N +
Sbjct: 525 DDFTRKVWVY--FMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKL 576
>At3g45520 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1363
Score = 80.1 bits (196), Expect = 4e-15
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 23/295 (7%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNL-ILKFKKDKVKVRAI- 116
++D+G + H + L +F+ + ++ RV+G G + I+ V ++ +
Sbjct: 317 IMDTGCIYHMTHKREWLEDFDEEAGGSVRMGNKSISRVKGVGTVRIVNDNGLTVTLQNVR 376
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPHEQ 176
Y DM N++S + AG ++ L ++G ++ L E + H ++
Sbjct: 377 YIPDMDRNLLSLGTFEKAGHKFESENGMLRIKSGNQV--LLEGRRYDTLYILHGKPATDE 434
Query: 177 TISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQ 236
+++ D + HR H++ K + I+KG + K +D C+
Sbjct: 435 SLAVARANDDTVLW-----HRRLCHMSQKNMSLLIKKGFLDKKKVSMLD-------TCED 482
Query: 237 CLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFG-PIRCRSSYPPQYFIAFTDEITRFR 295
C+ +AK+ N TK+ EY+H+DL+G P S QYFI+F D+ TR
Sbjct: 483 CIYGRAKKIGF--NLAQHDTKK--KLEYVHSDLWGAPTVPMSLGNCQYFISFIDDYTRKV 538
Query: 296 WTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKKE 350
W Y + KT +E +KF + +++Q G RV+T++ D G EF N M + +++
Sbjct: 539 WVY--FLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEK 591
>At3g61330 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1352
Score = 79.7 bits (195), Expect = 6e-15
Identities = 70/292 (23%), Positives = 127/292 (42%), Gaps = 36/292 (12%)
Query: 60 IDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKV--RAIY 117
+DSGA+ + KS+ + S + E+++ V+G+GN++++ K + Y
Sbjct: 337 LDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYY 396
Query: 118 TTDMSMNVIS---------DAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYC 168
M N++S D LK+ + +++ LI++ +++ L I C
Sbjct: 397 IPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQC 456
Query: 169 HISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTG 228
E++ H FGH+N + RK ++GL
Sbjct: 457 LKMCYKEESWLW---------------HLRFGHLNFGGLELLSRKEMVRGLP-----CIN 496
Query: 229 YSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFT 288
+ + C+ CL K + + S K P E +HTD+ GPI+ +S YF+ F
Sbjct: 497 HPNQVCEGCLLGKQFKMSFPKESSSRAQK---PLELIHTDVCGPIKPKSLGKSNYFLLFI 553
Query: 289 DEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
D+ +R W Y + K EV + FK+ ++ + G ++T++ DRG EFT+
Sbjct: 554 DDFSRKTWVY--FLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS 603
>At1g58140 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1320
Score = 79.7 bits (195), Expect = 6e-15
Identities = 70/292 (23%), Positives = 127/292 (42%), Gaps = 36/292 (12%)
Query: 60 IDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKV--RAIY 117
+DSGA+ + KS+ + S + E+++ V+G+GN++++ K + Y
Sbjct: 337 LDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYY 396
Query: 118 TTDMSMNVIS---------DAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYC 168
M N++S D LK+ + +++ LI++ +++ L I C
Sbjct: 397 IPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQC 456
Query: 169 HISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTG 228
E++ H FGH+N + RK ++GL
Sbjct: 457 LKMCYKEESWLW---------------HLRFGHLNFGGLELLSRKEMVRGLP-----CIN 496
Query: 229 YSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFT 288
+ + C+ CL K + + S K P E +HTD+ GPI+ +S YF+ F
Sbjct: 497 HPNQVCEGCLLGKQFKMSFPKESSSRAQK---PLELIHTDVCGPIKPKSLGKSNYFLLFI 553
Query: 289 DEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
D+ +R W Y + K EV + FK+ ++ + G ++T++ DRG EFT+
Sbjct: 554 DDFSRKTWVY--FLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS 603
>At1g11265 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1352
Score = 79.7 bits (195), Expect = 6e-15
Identities = 70/292 (23%), Positives = 127/292 (42%), Gaps = 36/292 (12%)
Query: 60 IDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKV--RAIY 117
+DSGA+ + KS+ + S + E+++ V+G+GN++++ K + Y
Sbjct: 337 LDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYY 396
Query: 118 TTDMSMNVIS---------DAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYC 168
M N++S D LK+ + +++ LI++ +++ L I C
Sbjct: 397 IPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQC 456
Query: 169 HISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTG 228
E++ H FGH+N + RK ++GL
Sbjct: 457 LKMCYKEESWLW---------------HLRFGHLNFGGLELLSRKEMVRGLP-----CIN 496
Query: 229 YSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFT 288
+ + C+ CL K + + S K P E +HTD+ GPI+ +S YF+ F
Sbjct: 497 HPNQVCEGCLLGKQFKMSFPKESSSRAQK---PLELIHTDVCGPIKPKSLGKSNYFLLFI 553
Query: 289 DEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
D+ +R W Y + K EV + FK+ ++ + G ++T++ DRG EFT+
Sbjct: 554 DDFSRKTWVY--FLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS 603
>At4g10460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1230
Score = 79.0 bits (193), Expect = 1e-14
Identities = 66/255 (25%), Positives = 111/255 (42%), Gaps = 21/255 (8%)
Query: 97 EGEGNLILKFKKDKVKVRAIYTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKL 156
E G + K K R Y DM N++S L+ G +++ L+ + G R +
Sbjct: 334 EDAGGTVRMGNKSTSKFRVKYIPDMDRNLLSMGTLEEHGYSFESKNGVLVVKEGTRTLLI 393
Query: 157 YELGSLCWIPYCHISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHI 216
GS Y KP + R+ HR GHI+ K + ++KG++
Sbjct: 394 ---GSRHEKLYLLQGKPEVSHSMTVERRNDDTVLW----HRRLGHISQKNMDILVKKGYL 446
Query: 217 QGLKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFG-PIRC 275
G K ++ C+ C+ KA+R + V + K Y+H+DL+G P
Sbjct: 447 DGKKVSKLEL-------CEDCIYGKARRLSFVVATHNTEDK----LNYVHSDLWGAPSVP 495
Query: 276 RSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRG 335
S QYFI+F D +R W Y + K +E F E + +++Q G +++ +++D G
Sbjct: 496 LSLGKCQYFISFIDVYSRKTWVY--FLKHKDEAFGTFAEWSVMVENQTGRKIKILRIDNG 553
Query: 336 SEFTNNMTRAYSKKE 350
EF N + K++
Sbjct: 554 LEFCNQQFNDFCKEK 568
>At1g48710 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1352
Score = 77.0 bits (188), Expect = 4e-14
Identities = 69/292 (23%), Positives = 126/292 (42%), Gaps = 36/292 (12%)
Query: 60 IDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKV--RAIY 117
+DSGA+ + KS+ + S + E+++ V+G+GN++++ K + Y
Sbjct: 337 LDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYY 396
Query: 118 TTDMSMNVIS---------DAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYC 168
M N++S D LK+ + +++ LI++ +++ L I C
Sbjct: 397 IPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQC 456
Query: 169 HISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTG 228
E++ H FGH+N + RK ++GL
Sbjct: 457 LKMCYKEESWLW---------------HLRFGHLNFGGLELLSRKEMVRGLP-----CIN 496
Query: 229 YSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFT 288
+ + C+ CL K + + S K E +HTD+ GPI+ +S YF+ F
Sbjct: 497 HPNQVCEGCLLGKQFKMSFPKESSSRAQKS---LELIHTDVCGPIKPKSLGKSNYFLLFI 553
Query: 289 DEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
D+ +R W Y + K EV + FK+ ++ + G ++T++ DRG EFT+
Sbjct: 554 DDFSRKTWVY--FLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS 603
>At3g59720 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1272
Score = 76.3 bits (186), Expect = 6e-14
Identities = 70/297 (23%), Positives = 128/297 (42%), Gaps = 46/297 (15%)
Query: 60 IDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKV--RAIY 117
+DSGA+ + KS+ + S + E+++ V+G+GN++++ K + Y
Sbjct: 337 LDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYY 396
Query: 118 TTDMSMNVIS---------DAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYC 168
M N++S D LK+ + +++ LI++ +++ L I C
Sbjct: 397 IPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVLNIRNDIAQC 456
Query: 169 HISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTG 228
E++ H FGH+N + RK ++GL
Sbjct: 457 LKMCYKEESWLW---------------HLRFGHLNFGGLELLSRKEMVRGLP-----CIN 496
Query: 229 YSSFQCQQCLESKAKRNNHYVNSRMDYTKE-----YYPFEYLHTDLFGPIRCRSSYPPQY 283
+ + C+ CL N + +M + KE P E +HTD+ GPI+ +S Y
Sbjct: 497 HPNQVCEGCL-----LGNQF---KMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNY 548
Query: 284 FIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
F+ F D+ +R W Y + K EV + FK+ ++ + G ++T++ D G EFT+
Sbjct: 549 FLLFIDDFSRKTWVY--FLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTS 603
>At2g05960 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1200
Score = 73.6 bits (179), Expect = 4e-13
Identities = 64/306 (20%), Positives = 132/306 (42%), Gaps = 44/306 (14%)
Query: 60 IDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKVRA--IY 117
+D+GA+ + ++ + ++ +++I + G+G+++ K + K A Y
Sbjct: 259 LDNGASNHMTGNRDWFCKLDEMVTGKVKFGDDSRIDIRGKGSILFLTKNGEPKTLANVYY 318
Query: 118 TTDMSMNVIS---------DAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYC 168
D+ N+IS D LK+ + +R L+ + + +LY +
Sbjct: 319 IPDLKSNIISLGQATEAGCDVRLKDNYLTLHDRDGNLLVKATRSRNRLYRV--------- 369
Query: 169 HISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGL----KEDDV 224
+ + + + ++ D L H GHIN++ I+ + K + G+ KE ++
Sbjct: 370 ELKVKNTKCLQLAALND------LTKWHARLGHINLETIKAMVTKEFVIGIPSAPKEKEI 423
Query: 225 DWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYF 284
C C+ K R V + + E +H DL GPI ++ +Y
Sbjct: 424 ---------CASCMLGKQARQ---VFPKATTYRASQILELIHGDLCGPISPPTAAKRRYI 471
Query: 285 IAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTR 344
+ D+ +RF W++ L K+ E KFK ++ + G +++T++ DRG EF + +
Sbjct: 472 LVLIDDHSRFMWSFLLKEKS--EAFGKFKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQ 529
Query: 345 AYSKKE 350
+ ++E
Sbjct: 530 TFCEEE 535
>At4g04380 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 778
Score = 72.0 bits (175), Expect = 1e-12
Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 23/287 (8%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNL-ILKFKKDKVKVRAI- 116
++D+G + + H + L +F+ + + RV+G G + I V ++ +
Sbjct: 200 IMDTGCSYHMTHKREWLEDFDEEAGCSVRMGNKTISRVKGVGTVRIANDNGLTVTLQNVR 259
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPHEQ 176
Y +DM +S + AG ++ L G+++ L E + H ++
Sbjct: 260 YISDMDRIFLSLGTFEKAGRKFESENDMLRVNAGEQV--LLEGRRYDTLYILHGKPATDE 317
Query: 177 TISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQ 236
+++ D + HR H++ K + ++KG + K +D C+
Sbjct: 318 SLAVAKAND-----DIVLWHRRLCHMSQKNMSLLVKKGFLDKKKVSMLD-------TCED 365
Query: 237 CLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFG-PIRCRSSYPPQYFIAFTDEITRFR 295
C+ KAK+ N TKE EY+H DL+G P + QYFI+F D+ TR
Sbjct: 366 CIYGKAKKIGF--NFAQHDTKE--KLEYVHYDLWGAPTMPMALGNCQYFISFIDDHTRKV 421
Query: 296 WTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNM 342
Y + KT +E +KF + +++Q G RV+T++ D G EF N M
Sbjct: 422 CVY--FLKTKDEAFEKFVSWISLVENQSGNRVKTLRTDNGLEFCNRM 466
>At1g32590 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1334
Score = 70.9 bits (172), Expect = 3e-12
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 171 SKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYS 230
SK E+T I A N + H+ FGH+N + +R K ++GL + D+ G
Sbjct: 416 SKETEETRCLQVIGKANNMW-----HKRFGHLNHQGLRSLAEKEMVKGLPKFDL---GEE 467
Query: 231 SFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDE 290
C CL+ K R + S T+ + +HTD+ GPI S+ +Y + F D+
Sbjct: 468 EAVCDICLKGKQIRESIPKESAWKSTQV---LQLVHTDICGPINPASTSGKRYILNFIDD 524
Query: 291 ITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
+R WTY L K+ E FKE +++ + G ++ ++ DRG E+ + Y K+
Sbjct: 525 FSRKCWTYLLSEKS--ETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKE 581
>At2g21460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1333
Score = 70.1 bits (170), Expect = 5e-12
Identities = 72/289 (24%), Positives = 124/289 (41%), Gaps = 31/289 (10%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVK--VRAI 116
++D+G + + + + + N + + +V G G + +K + V
Sbjct: 288 VMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRLTNVR 347
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIA----KLYELGSLCWIPYCHISK 172
Y +M N++S + +G L G + + Y L L W P
Sbjct: 348 YIPEMDRNLLSLGTFEKSGYSFKLENGTLSIIAGDSVLLTVRRCYTLYLLQWRPVT---- 403
Query: 173 PHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSF 232
E+++S + +D + HR GH++ K + ++KG + K ++
Sbjct: 404 --EESLSVVKRQDDTILW-----HRRLGHMSQKNMDLLLKKGLLDKKKVSKLE------- 449
Query: 233 QCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFG-PIRCRSSYPPQYFIAFTDEI 291
C+ C+ KAKR N T+E EY+H+DL+G P S QYFI+F D+
Sbjct: 450 TCEDCIYGKAKRIGF--NLAQHDTRE--KLEYVHSDLWGAPSVPFSLGKCQYFISFIDDY 505
Query: 292 TRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
TR Y + KT +E DKF E +++Q R++T++ D G EF N
Sbjct: 506 TRKVRIY--FLKTKDEAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCN 552
>At2g16000 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1454
Score = 68.2 bits (165), Expect = 2e-11
Identities = 71/302 (23%), Positives = 133/302 (43%), Gaps = 47/302 (15%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKVRAIYT 118
+IDSGAT V HD+SL + + S + +++ G G L K D + ++
Sbjct: 432 VIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTL--KLNDDILLKNVLFI 489
Query: 119 TDMSMNVISDAHL-----------KNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPY 167
+ +N+IS + L KN+ +D + ++ + G+R+A LY L
Sbjct: 490 PEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQ-GRRVANLYLLDV------ 542
Query: 168 CHISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWT 227
+Q+IS ++ D ++ HR GH +++ + K D+
Sbjct: 543 ------GDQSISVNAVVD------ISMWHRRLGHASLQRLDAISDSLGTTRHKNKGSDF- 589
Query: 228 GYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAF 287
C C +K ++ + ++++ KE F+ LH D++GP + +YF+
Sbjct: 590 ------CHVCHLAKQRKLSFPTSNKV--CKEI--FDLLHIDVWGPFSVETVEGYKYFLTI 639
Query: 288 TDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYS 347
D+ +R W Y L KT EV+ F + Q+++Q+ +V+ ++ D E T Y+
Sbjct: 640 VDDHSRATWMYLL--KTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPEL--KFTSFYA 695
Query: 348 KK 349
+K
Sbjct: 696 EK 697
>At3g29775 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1348
Score = 67.0 bits (162), Expect = 4e-11
Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 22/284 (7%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKK-DKVKVRAIY 117
++DSG T + D + S + ++ EG+G++ + K D V +Y
Sbjct: 325 LVDSGCTNHMSKDVRHFIALDRSKKIIIRIGNGGKVVSEGKGDIRVSTNKGDHVIKDVLY 384
Query: 118 TTDMSMNVISDAHLKNAG---IFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH 174
+++ N++S + + + G IF DN+ + G++I + I + K
Sbjct: 385 VPELARNLLSVSQMISNGYRVIFEDNKC-VIQDLKGRKILDIKMKDRSFPIIW---KKSR 440
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
E+T A ++ H+ FGH+N I ++ L + +V C
Sbjct: 441 EETYMAFEEKEEQTDLW----HKRFGHVNYDKIETMQTLKIVEKLPKFEV-----IKGIC 491
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
C K R + S+ + K E +H+D+ GP++ S +YF+ F D+ +R
Sbjct: 492 AACEMGKQSRRSFPKKSQSNTNKT---LELIHSDVCGPMQTESINGSRYFLTFIDDFSRM 548
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
W Y + K EV+ KFK +++Q +R++ ++ D G EF
Sbjct: 549 TWVY--FLKNKSEVITKFKIFKPYVENQSESRIKRLRTDGGGEF 590
>At1g31210 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1415
Score = 67.0 bits (162), Expect = 4e-11
Identities = 39/151 (25%), Positives = 74/151 (48%), Gaps = 13/151 (8%)
Query: 196 HRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDY 255
H GH N K ++ H+Q K ++ + S C+ C K+ R ++
Sbjct: 457 HHRLGHANSKALQ------HLQNSKAIQINKSRTSPV-CEPCQMGKSSRLPFLISD---- 505
Query: 256 TKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEI 315
++ +P + +H DL+GP S+ +Y+ F D+ +R+ W YPL++K+ E + F
Sbjct: 506 SRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKS--EFLSVFISF 563
Query: 316 VMQLKSQFGTRVRTIQMDRGSEFTNNMTRAY 346
+++Q T+++ Q D G EF +N + +
Sbjct: 564 QKLVENQLNTKIKVFQSDGGGEFVSNKLKTH 594
>At1g56675 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1486
Score = 65.9 bits (159), Expect = 9e-11
Identities = 37/116 (31%), Positives = 61/116 (51%), Gaps = 6/116 (5%)
Query: 223 DVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQ 282
DV + + S C+ C+++K R+ ++S K + FE +H DL+GP R S +
Sbjct: 526 DVTSSTFDSKTCEICIQAKQTRDPFPLSSN----KTSFAFELVHCDLWGPYRTTSICGSR 581
Query: 283 YFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
YF+ D+ +R W Y L SK +E K + ++ Q+ T ++ I+ D GSEF
Sbjct: 582 YFLTLVDDYSRAVWLYLLPSK--QEAPKHLKNFIALVERQYTTNIKMIRSDNGSEF 635
>At1g37110 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1356
Score = 65.1 bits (157), Expect = 1e-10
Identities = 66/304 (21%), Positives = 128/304 (41%), Gaps = 24/304 (7%)
Query: 50 ITRNPARDLMI-DSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKK 108
+ +DL I DSG T + + +F + + ++ + +G+G + +
Sbjct: 299 VNEQMVKDLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHG 358
Query: 109 DKVKV--RAIYTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIP 166
+K+ Y + N+IS L G + + + + A L + ++
Sbjct: 359 GTIKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFKNNKTALRGSLSNGLYVL 418
Query: 167 YCHISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDW 226
T+ + ++ A H GH+++ ++ KG I + +++++
Sbjct: 419 -------DGSTVMSELCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLIDRKEINELEF 471
Query: 227 TGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFG-PIRCRSSYPPQYFI 285
C+ C+ K+K+ + V +T E Y+H DL+G P S QYF+
Sbjct: 472 -------CEHCVMGKSKKVSFNVGK---HTSED-ALSYVHADLWGSPNVTPSISGKQYFL 520
Query: 286 AFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRA 345
+ D+ TR W Y L SK +E DKF E +++Q +V+ ++ D G EF N+ +
Sbjct: 521 SIIDDKTRKVWLYFLKSK--DETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDS 578
Query: 346 YSKK 349
Y K+
Sbjct: 579 YCKE 582
>At4g03810 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 964
Score = 64.7 bits (156), Expect = 2e-10
Identities = 43/147 (29%), Positives = 75/147 (50%), Gaps = 13/147 (8%)
Query: 196 HRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDY 255
H GHIN K+I+ K H GL + D+ Y + C+ CL K + +S
Sbjct: 85 HCRLGHINEKHIQ----KLHSDGLL-NSFDYESYET--CESCLLGKMTKAPFTGHSE--- 134
Query: 256 TKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEI 315
+ +HTD+ GP+ + QYFI FTD+ +R+ + Y + K+ + + FKE
Sbjct: 135 -RASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKHKS--KSFENFKEF 191
Query: 316 VMQLKSQFGTRVRTIQMDRGSEFTNNM 342
++++QFG ++ ++ DRG E+ + +
Sbjct: 192 QNEVQNQFGKSIKALRSDRGGEYLSQV 218
>At1g27285 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1432
Score = 64.7 bits (156), Expect = 2e-10
Identities = 75/316 (23%), Positives = 134/316 (41%), Gaps = 47/316 (14%)
Query: 38 TLGLTPRTQNTKITRNPARDLMIDSGATISVVHDKS--LLHN-FNPSTDQQLFDTQENQI 94
T+ PR ++ NP ++DSGAT + D + LH +N + + D I
Sbjct: 305 TVPWQPRANMAAMSYNP---WLLDSGATHHLTTDLNNLALHQPYNGGEEVTIADGSTLPI 361
Query: 95 RVEGEGNLILKFKKDKVKVRAIYTTDMSMNVISDAHLKNAG-----IFRDNRQPFLISRT 149
G L + + + +Y ++ N+IS L NA F + Q +S T
Sbjct: 362 THTGSSTLSTQSRSLALN-NILYVPNLHKNLISVYKLCNANKVSVEFFPAHFQVKDLS-T 419
Query: 150 GKRIAK------LYELGSLCWIPYCHISKPHEQTISAISIRDAPNRFSLANVHRWFGHIN 203
G R+ + LYE P + P +T +L + H GH +
Sbjct: 420 GARLLQGRTKDELYEWPVPSNTPISLFASPTPKT-------------TLPSWHSRLGHPS 466
Query: 204 VKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFE 263
++ + + + V + F C CL +K+ + Y N+ + YT P E
Sbjct: 467 PPVLKSLVSQFSLP------VSNSSQKHFPCSHCLINKSHKLPFYSNTIISYT----PLE 516
Query: 264 YLHTDLF-GPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQ 322
Y+++D++ P+ ++ +Y++ D TR+ W YPL K+ +V + F ++++
Sbjct: 517 YVYSDVWTSPVTSVDNF--KYYLILVDHYTRYTWLYPLKQKS--QVRETFVAFKALVENR 572
Query: 323 FGTRVRTIQMDRGSEF 338
F T++RT+ D G EF
Sbjct: 573 FQTKIRTLYSDNGGEF 588
>At3g25450 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1343
Score = 63.9 bits (154), Expect = 3e-10
Identities = 64/303 (21%), Positives = 126/303 (41%), Gaps = 37/303 (12%)
Query: 60 IDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNL--ILKFKKDKVKVRAIY 117
+D+GA+ + +++ + ++ ++ I ++G+G++ I K + K+ Y
Sbjct: 294 LDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISKGGERKILFDVYY 353
Query: 118 TTDMSMNVIS---------DAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYC 168
D+ N++S D ++ + +R+ L+ + + +LY++ C
Sbjct: 354 IPDLKSNILSLGQATESGCDIRMREDYLTLHDREGNLLIKAQRSRNRLYKVSLEVENSKC 413
Query: 169 -HISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWT 227
++ +E TI H GHI+ + I+ I+K + G+
Sbjct: 414 LQLTTTNESTIW----------------HARLGHISFETIKAMIKKELVIGISSS----V 453
Query: 228 GYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAF 287
C CL K R H Y + E +H DL GPI ++ +Y
Sbjct: 454 PQEKETCGSCLFGKQAR--HSFPKATSY-RAAQVLELIHGDLCGPISPSTAAKKRYVFVL 510
Query: 288 TDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYS 347
D+ +R+ W+ L K+ E KFKE ++ + G ++T + DRG EF ++ + +
Sbjct: 511 IDDHSRYMWSILLKEKS--EAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFC 568
Query: 348 KKE 350
KE
Sbjct: 569 AKE 571
>At1g36035 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1418
Score = 63.9 bits (154), Expect = 3e-10
Identities = 67/297 (22%), Positives = 132/297 (43%), Gaps = 30/297 (10%)
Query: 48 TKITRNPARDLMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFK 107
T + R DSG + + +S+L +F+ + ++ + ++G+G + +
Sbjct: 581 TSVVSQNNRAWYFDSGCSRHMTGVQSILKDFSVINNGKVTFGDGGKGSIKGKGKIEID-- 638
Query: 108 KDKVKVRAIYTTD-MSMNVISDAHLKNAGIFRDNRQPFLISRTG---KRIAKLYELGSLC 163
D+ + +Y + ++ N+IS + L D+ ++TG IA L +C
Sbjct: 639 -DQPHLSNVYFVEGLTANLISISQLC------DDDLTVTFTKTGCVALDIAGNNVLSGVC 691
Query: 164 WIPYCHISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDD 223
C++ K E +SAI+ + L H+ H+N + + + + ++G+ + +
Sbjct: 692 SGNNCYMWKDSEVCLSAITSK-------LDLWHQRLRHMNTQSLVKIVNADVVRGIPKLE 744
Query: 224 VDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQY 283
G +S C+ C + K + + + T E +H DL GP++ S +Y
Sbjct: 745 ----GSTSVVCKTCSQGKQVKVQQKRATHIGTTSV---LELVHMDLMGPVQTESLSGKKY 797
Query: 284 FIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
+ D+ +RF W L K E + FK + +QL+++ G V+ I+ D G EF N
Sbjct: 798 ILVLVDDYSRFTWVRFLREKF--EAAESFKILALQLQTEKGNLVQ-IRSDHGGEFQN 851
>At2g17490 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 822
Score = 63.5 bits (153), Expect = 4e-10
Identities = 61/283 (21%), Positives = 124/283 (43%), Gaps = 23/283 (8%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKVR-AIY 117
+IDSG T + ++ L N + + EG+G++ + +KDK +R +
Sbjct: 31 LIDSGCTNHMTPNEKLFTKINRDFKVPIRVGNGAVMMSEGKGDIEVMTRKDKRGIRDVLL 90
Query: 118 TTDMSMNVISDAHLKNAG--IFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPHE 175
+ N++S + G + N + K+I ++ + H+
Sbjct: 91 VPKLGKNLLSVPQMIINGYQVTLKNNYCTIHDSARKKIGEVEMVNKSF-----HLRWLSN 145
Query: 176 QTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQ 235
+ + ++ +A + H GH N+K ++ K + GL + +V+ +C+
Sbjct: 146 EETAMVAKDEATELWHKRLGHT--GHSNLKILQS---KEMVTGLPKFNVE-----EGKCE 195
Query: 236 QCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFR 295
C+ SK R+ S T+ + E +H+D+ GP++ S +Y + F D+ TR
Sbjct: 196 SCILSKHSRDPFPKESE---TRAKHKLELIHSDVCGPMQNSSINGSRYILTFIDDATRMV 252
Query: 296 WTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
W Y + K EV FK+ +++ R++ +++DRG+E+
Sbjct: 253 WVY--FLKAKSEVFQTFKKFKNLVENNANCRIKKLRIDRGTEY 293
>At5g35820 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1342
Score = 62.4 bits (150), Expect = 1e-09
Identities = 67/302 (22%), Positives = 122/302 (40%), Gaps = 53/302 (17%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDK--VKVRAI 116
++D+G + + K + +F + ++ + V+G G++ +K + +
Sbjct: 313 ILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKGIGDVRIKNEDGSTILLTDVR 372
Query: 117 YTTDMSMNVISDAHLKNAGIFRDNRQPFLIS-------RTGKRIAKLYELGSLCWIPYCH 169
Y +MS N+IS L++ G + ++++ L TGK+ + LY L +
Sbjct: 373 YIPEMSKNLISLGTLEDKGCWFESKKGILTIFKNDLTVLTGKKESTLYFLQGTTLAGEAN 432
Query: 170 ISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGY 229
+ + S H GHI K ++ + KGH+ D
Sbjct: 433 VIDKEKDETSLW--------------HSRLGHIGAKGLQVLVSKGHL--------DKNIM 470
Query: 230 SSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPP-QYFIAFT 288
SF + H ++D Y+H+DL+G S QYFI F
Sbjct: 471 ISFGAAK----------HVTKDKLD---------YVHSDLWGSTNVPFSIGKCQYFITFI 511
Query: 289 DEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSK 348
D+ TR W Y + +T +E KF E Q+++Q +++ + D G EF N ++ +
Sbjct: 512 DDFTRRTWIY--FIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCR 569
Query: 349 KE 350
KE
Sbjct: 570 KE 571
>At1g47650_1 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1232
Score = 62.4 bits (150), Expect = 1e-09
Identities = 78/324 (24%), Positives = 135/324 (41%), Gaps = 57/324 (17%)
Query: 39 LGLTPRTQNTKITRNPARDLMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEG 98
LG TP+ + + +IDSGA V HDKSL N + S + +R+ G
Sbjct: 319 LGFTPKGKGGD------KSQVIDSGAIHHVSHDKSLFLNLDTSVVSAVNLPAGPTVRISG 372
Query: 99 EGNLIL-------------KFKKDKVKVRAIYTTDMSMNVISDAHLKNAGIFRDNRQPFL 145
G L L +F+ + + + ++ T D+ VI D K + +D + +
Sbjct: 373 VGTLRLNDDILLKNILFIPEFRLNLISISSL-TDDIGSRVIFD---KTSCEIQDPIKARM 428
Query: 146 ISRTGKRIAKLYELGSLCWIPYCHISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVK 205
+ + G+RIA LY L + +S ++ D ++ HR GH +++
Sbjct: 429 LGQ-GRRIANLYVLDI------------EDPIVSVNAVVD------ISMWHRRLGHASLQ 469
Query: 206 YIRESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYL 265
R + + K + S C C AK+ S+ E F+ L
Sbjct: 470 --RLDVISDSLGTTKPKNK-----GSDYCHVC--HLAKQRKLPFPSQNKVCNEI--FDLL 518
Query: 266 HTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGT 325
H D++GP + +YF+ D+ +R W Y L +K+ EV+ F + Q+++Q+
Sbjct: 519 HIDIWGPFSVETVDGYKYFLTIVDDHSRATWIYLLRNKS--EVLTVFPAFIEQVENQYKV 576
Query: 326 RVRTIQMDRGSEFTNNMTRAYSKK 349
RV+ ++ D E T Y +K
Sbjct: 577 RVKAVRSDNAPEL--KFTSLYQQK 598
>At2g10610 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 767
Score = 62.0 bits (149), Expect = 1e-09
Identities = 62/294 (21%), Positives = 124/294 (42%), Gaps = 22/294 (7%)
Query: 60 IDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNL--ILKFKKDKVKVRAIY 117
+D+GA+ + D+ + S ++ +++I ++G+G + I K +V + +
Sbjct: 71 LDNGASNHMTGDRRYFDKMDHSITGKIRFGDDSRIDIKGKGTIAFIDLNGKPRVMLDVYF 130
Query: 118 TTDMSMNVISDAHLKNAGIFRDNRQPFLI--SRTGKRIAKLYELGSLCWIPYCHISKPHE 175
++ N+IS +G + +L + GK + K + + + K
Sbjct: 131 IPELKSNIISLGQATESGCEIKLKDGYLTMHDQEGKLLVKAERSRNSLYKVKMGLRKEAC 190
Query: 176 QTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQ 235
+++ S+ H GH+++ ++ I K IQG ++ S C
Sbjct: 191 LYLTSTSMSSL--------WHARMGHVSLITLKSMIDKELIQGAPSLVIE-----SEVCG 237
Query: 236 QCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFR 295
CL K R + + TK+ E +H DL GPI ++S +Y D+ +R+
Sbjct: 238 SCLLGKQTRQSFPQATVFRATKK---LELIHGDLCGPITPKTSVGNRYIFVLIDDYSRYM 294
Query: 296 WTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
WT L K + KFK ++ + G +++T DRG EF + ++ ++
Sbjct: 295 WTVLL--KEKGDAFFKFKNFKALVEKESGEKIQTFITDRGGEFVSGEFNSFCER 346
>At2g20460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1461
Score = 60.5 bits (145), Expect = 4e-09
Identities = 73/306 (23%), Positives = 124/306 (39%), Gaps = 55/306 (17%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKVRAIYT 118
+IDSGAT V HD+ L + S + +R+ G G +++ KD + ++
Sbjct: 443 VIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLIN--KDIILQNVLFI 500
Query: 119 TDMSMNVISDAHLKNAGIFRDNRQPF----------LISRTGKRIAKLYELGSLCWIPYC 168
+ +N+IS + L R P L GKRI LY L +
Sbjct: 501 PEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLDT------- 553
Query: 169 HISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTG 228
IS ++ D ++ H+ GH + + +S+ + + G +
Sbjct: 554 -----QSPAISVNAVVD------VSVWHKRLGHPSFSRL-DSLSE--VLGTTRHKNKKSA 599
Query: 229 YSSFQCQQCLESKAKR-----NNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQY 283
Y C C +K K+ N+ NS FE LH D++GP + +Y
Sbjct: 600 Y----CHVCHLAKQKKLSFPSANNICNST---------FELLHIDVWGPFSVETVEGYKY 646
Query: 284 FIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMT 343
F+ D+ +R W Y L SK+ +V+ F + +++Q+ TRV++++ D E T
Sbjct: 647 FLTIVDDHSRATWIYLLKSKS--DVLTVFPAFIDLVENQYDTRVKSVRSDNAKELA--FT 702
Query: 344 RAYSKK 349
Y K
Sbjct: 703 EFYKAK 708
>At4g16870 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1474
Score = 60.1 bits (144), Expect = 5e-09
Identities = 65/297 (21%), Positives = 123/297 (40%), Gaps = 41/297 (13%)
Query: 55 ARDLMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFK-KDKVKV 113
A + ++DSGAT + D + L P + +++ G+ L +D
Sbjct: 330 ANNWLLDSGATHHITSDLNALALHQPYNGDDVMIADGTSLKITKTGSTFLPSNARDLTLN 389
Query: 114 RAIYTTDMSMNVISDAHLKNAGIF-----------RDNRQPFLISRTGKRIAKLYELGSL 162
+ +Y D+ N++S L N +D L+ + G+ +LYE
Sbjct: 390 KVLYVPDIQKNLVSVYRLCNTNQVSVEFFPASFQVKDLNTGTLLLQ-GRTKDELYE---- 444
Query: 163 CWIPYCHISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKED 222
W ++ P +A+ +P + +L++ H GH + + I K +
Sbjct: 445 -W----PVTNPKA---TALFTTPSP-KTTLSSWHSRLGHPSSSILNTLISKFSLP----- 490
Query: 223 DVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLF-GPIRCRSSYPP 281
V + + C C +K+ + ++S K P EY+ +D++ PI +Y
Sbjct: 491 -VSVSASNKLACSDCFINKSHKLPFSISS----IKSTSPLEYIFSDVWMSPILSPDNY-- 543
Query: 282 QYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
+Y++ D TR+ W YPL K+ +V F ++++F ++RT+ D G EF
Sbjct: 544 KYYLVLVDHHTRYTWLYPLQQKS--QVKSTFIAFKALVENRFQAKIRTLYSDNGGEF 598
>At2g13930 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1335
Score = 60.1 bits (144), Expect = 5e-09
Identities = 69/305 (22%), Positives = 138/305 (44%), Gaps = 25/305 (8%)
Query: 50 ITRNPARDLMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKD 109
+T + A + ++D+G + + K +F + + + V+G G++ ++
Sbjct: 277 VTDSIANEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDG 336
Query: 110 K--VKVRAIYTTDMSMNVISDAHLKNAGIFRDNRQPFL-ISRTGKRIAKLYELGSLCWIP 166
+ Y +M+ N+IS L++ G + ++ L I + I K + +L +
Sbjct: 337 SQVILTDVRYMPNMTRNLISLGTLEDRGCWFKSQDGILKIVKGCSTILKGQKRDTLYILD 396
Query: 167 YCHISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDW 226
+++ E SA ++D A H GH++ K + ++KG ++ ++++
Sbjct: 397 --GVTEEGESHSSA-EVKD-----ETALWHSRLGHMSQKGMEILVKKGCLRREVIKELEF 448
Query: 227 TGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFG-PIRCRSSYPPQYFI 285
C+ C+ K R + + TKE Y+H+DL+G P S QYFI
Sbjct: 449 -------CEDCVYGKQHRVSFAPAQHV--TKE--KLAYVHSDLWGSPHNPASLGNSQYFI 497
Query: 286 AFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRA 345
+F D+ +R W Y L K +E +KF E +++Q +V+ ++ D G E+ N+
Sbjct: 498 SFVDDYSRKVWIYFLRKK--DEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEK 555
Query: 346 YSKKE 350
+ K+E
Sbjct: 556 FCKEE 560
>At2g11950 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 616
Score = 60.1 bits (144), Expect = 5e-09
Identities = 56/260 (21%), Positives = 107/260 (40%), Gaps = 22/260 (8%)
Query: 94 IRVEGEGNLILKFKKDKVKVRAIY-TTDMSMNVISDAHLKNAG--IFRDNRQPFLISRTG 150
+ + G+G++ + K +R ++ + + N++S + + G + +N+ + RTG
Sbjct: 149 VMIAGKGDITVCTSFRKKVIRNVFLVSGLEKNLLSVPQIISVGYSVLFENKCCTNLDRTG 208
Query: 151 KRIAKLYELGSLCWIPYCHISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRES 210
K+I ++ + S P S S + HR GH+ + +
Sbjct: 209 KKIMEIQRVNK---------SFPIRWNSSQESELVTSEEEGMELWHRRLGHVGNSRMEQM 259
Query: 211 IRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLF 270
K + G V+ C C K R S+ TK E +HT++
Sbjct: 260 HNKKMVDGFPNFHVN-----KEICGVCKLGKQVREAFPTESQ---TKTKEKLEIVHTNVC 311
Query: 271 GPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTI 330
GP++ S YF+ D+ T W Y + K EV FK+ +++Q G +++ +
Sbjct: 312 GPMQTESLNGSIYFLLLVDDYTHMAWIY--FLKQKSEVFSVFKKSKALVETQSGKKIKRL 369
Query: 331 QMDRGSEFTNNMTRAYSKKE 350
+ D G EFT++ + +E
Sbjct: 370 RSDGGGEFTSSGFNEFCDQE 389
>At3g60170 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1339
Score = 58.5 bits (140), Expect = 1e-08
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 29/291 (9%)
Query: 60 IDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKK-DKVKVRAIYT 118
+DSG + + K ++ + + ++ V G+G++ +K +V Y
Sbjct: 302 LDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVIPEVYYV 361
Query: 119 TDMSMNVISDAHLKNAGI---FRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPHE 175
++ N++S L+ G+ RD G I + G+ + + SKP +
Sbjct: 362 PELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGA-IMETNMSGNRMF--FLLASKPQK 418
Query: 176 QTI--SAISIRDAPNRFSLANVHRW---FGHINVKYIRESIRKGHIQGLKEDDVDWTGYS 230
++ + D N H W FGH+N + ++ K + GL +
Sbjct: 419 NSLCLQTEEVMDKEN-------HLWHCRFGHLNQEGLKLLAHKKMVIGLPILKA-----T 466
Query: 231 SFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDE 290
C CL K R + S+ K + +H+D+ GPI S +Y ++F D+
Sbjct: 467 KEICAICLTGKQHRESM---SKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDD 523
Query: 291 ITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNN 341
TR W Y L+ K+ E FK ++ + G + ++ DRG EFT+N
Sbjct: 524 FTRKTWVYFLHEKS--EAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSN 572
>At2g23330 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1496
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 234 CQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITR 293
C C SK R +++ K F +H D++GP R S+ YF+ D+ +R
Sbjct: 533 CDTCFRSKQTREVFPISNN----KTMECFSLIHGDVWGPYRTPSTTGAVYFLTLVDDYSR 588
Query: 294 FRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
WTY + SKT EV K + QFG +V+ + D G+EF
Sbjct: 589 SVWTYLMSSKT--EVSQLIKNFCAMSERQFGKQVKAFRTDNGTEF 631
>At2g14930 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1149
Score = 58.5 bits (140), Expect = 1e-08
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 196 HRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKR----NNHYVNS 251
H GH N + ++ K IQ K +S C+ C K+ R + ++ S
Sbjct: 450 HMRLGHPNPQVLQLLANKKAIQINKS--------TSKMCESCRLGKSSRLPFIASDFIAS 501
Query: 252 RMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDK 311
R P E +H DL+GP S QY++ F D +RF W YPL K+ +
Sbjct: 502 R--------PLERVHCDLWGPAPVSSIQGFQYYVIFIDNRSRFCWFYPLKHKS--DFCSL 551
Query: 312 FKEIVMQLKSQFGTRVRTIQMDRGSEFTNN 341
F + +++ T++ T Q D G EFT+N
Sbjct: 552 FMKFQSFVENLLQTKIGTFQSDGGGEFTSN 581
>At2g07420 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1664
Score = 58.5 bits (140), Expect = 1e-08
Identities = 64/294 (21%), Positives = 122/294 (40%), Gaps = 26/294 (8%)
Query: 56 RDLMIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKVRA 115
+ L+IDSGA+ ++ D L+ N P+ + ++I V+G G+L L K K
Sbjct: 311 KPLIIDSGASHHMISDSKLISNIEPALGNVVI-ANGDRIPVKGVGDLDLFDKSSKAFYMP 369
Query: 116 IYTTDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPHE 175
+T+++ + L IF N F T + + + L + S P
Sbjct: 370 TFTSNLLSVKKATTDLNCYAIFGPNEVHFQDIETSRVLGQGVTKDGLYVLEDTKPSVPLS 429
Query: 176 QTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQ 235
S+I AN W + H + LK + T + + +C+
Sbjct: 430 SHFSSI--------LGNANSESWHARLG---------HPHSRALKLL-LPSTSFKNDECE 471
Query: 236 QCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFR 295
C+ K ++ + S Y K F+ +H+D++ C S +YF+ F DE ++F
Sbjct: 472 ACILGKHCKSV-FPKSSTIYEK---CFDLIHSDVWTS-PCLSRENHKYFVTFIDEKSKFT 526
Query: 296 WTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
W L SK + V++ F + + + +++ ++ D E+T++ + + K
Sbjct: 527 WFTLLPSK--DRVLEAFTNFQTYVTNHYDAKIKILRSDNRGEYTSHAFKQHLNK 578
>At2g15650 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1347
Score = 58.2 bits (139), Expect = 2e-08
Identities = 58/277 (20%), Positives = 117/277 (41%), Gaps = 25/277 (9%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKVRAIYT 118
++DSG T + ++ N N S + + + G+G++ + + K ++ ++
Sbjct: 327 LVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTAGKGDITVMTRHGKRIIKNVFL 386
Query: 119 TD-MSMNVISDAHLKNAGI---FRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPH 174
+ N++S + ++G F+D R + GK I + I +S
Sbjct: 387 VPGLEKNLLSVPQIISSGYWVRFQDKRC-IIQDANGKEIMNIEMTDKSFKIK---LSSVE 442
Query: 175 EQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQC 234
E+ ++A N + H+ GH++ K +++ K + GL V + C
Sbjct: 443 EEAMTA-------NVQTEETWHKRLGHVSNKRLQQMQDKELVNGLPRFKV-----TKETC 490
Query: 235 QQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRF 294
+ C K R + S+ TK E +HTD+ GP++ +S +Y++ F D+ T
Sbjct: 491 KACNLGKQSRKSFPKESQ---TKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHM 547
Query: 295 RWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQ 331
W Y + K E FK+ ++ Q ++T++
Sbjct: 548 CWVY--FLKQKSETFATFKKFKALVEKQSNCSIKTLR 582
>At1g57640 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1468
Score = 58.2 bits (139), Expect = 2e-08
Identities = 61/286 (21%), Positives = 117/286 (40%), Gaps = 45/286 (15%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKVRAIYT 118
++D+GA+ + + LL + + + N+ EG + + + Y
Sbjct: 399 ILDTGASHHMTGNLELLSDMRSMSPVLIILADGNKRVAVSEGTV--RLGSHLILKSVFYV 456
Query: 119 TDMSMNVISDAHLKNAGIFRDNRQPFLISRTGKRIAKLYELGSLCWIPYCHISKPHEQTI 178
++ ++IS + + D R +++R GKR E GS C+ + + H
Sbjct: 457 KELESDLISVGQMMDENHCVD-RTTRMVTRIGKR-----ENGSFCFRGMENAAAVHTSVK 510
Query: 179 SAISIRDAPNRFSLANVHRWFGHINVKYI----RESIRKGHIQGLKEDDVDWTGYSSFQC 234
+ + HR GH + K + RE + G + + E+ C
Sbjct: 511 APFDLW-----------HRRLGHASDKIVNLLPRELLSSG--KEILEN----------VC 547
Query: 235 QQCLESKAKRNNHYV--NSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEIT 292
C+ +K R+ + N MD F+ +H D++GP R S +YF+ D+ +
Sbjct: 548 DTCMRAKQTRDTFPLSDNRSMD------SFQLIHCDVWGPYRAPSYSGARYFLTIVDDYS 601
Query: 293 RFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
R W Y + K+ E K+ + ++ QF T ++ ++ D G+EF
Sbjct: 602 RGVWVYLMTDKS--ETQKHLKDFIALVERQFDTEIKIVRSDNGTEF 645
>At2g24660 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1156
Score = 57.4 bits (137), Expect = 3e-08
Identities = 34/108 (31%), Positives = 52/108 (47%), Gaps = 6/108 (5%)
Query: 231 SFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDE 290
S C C +K R V++ K F +H D++GP R SS YF+ D+
Sbjct: 118 SRSCDVCFRAKQTREVFPVSTN----KSIECFSLIHCDVWGPYRVPSSCGAVYFLTIVDD 173
Query: 291 ITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
+R WTY L +K+ EV ++ + QFG V+ ++ D G+EF
Sbjct: 174 FSRAVWTYLLLAKS--EVRTVLTNFLVYTEKQFGKSVKVLRSDNGTEF 219
>At4g02960 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1456
Score = 57.0 bits (136), Expect = 4e-08
Identities = 74/302 (24%), Positives = 128/302 (41%), Gaps = 50/302 (16%)
Query: 55 ARDLMIDSGATISVVHDKSLLHNFNPST---DQQLFDTQENQIRVEGEGNLILKFKKDKV 111
A + ++DSGAT + D + L P T D + D I G +L + +
Sbjct: 307 ANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDL 366
Query: 112 KVRAIYTTDMSMNVISDAHLKNAG-----IFRDNRQ--------PFLISRTGKRIAKLYE 158
+ +Y ++ N+IS L N F + Q P L GK +LYE
Sbjct: 367 N-KVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLL---QGKTKDELYE 422
Query: 159 LGSLCWIPYCHISKPHEQTISAISIRDAP-NRFSLANVHRWFGHINVKYIRESIRKGHIQ 217
W P + A+S+ +P ++ + ++ H GH ++ + I +
Sbjct: 423 -----W-PIA--------SSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLP 468
Query: 218 GLKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFG-PIRCR 276
L + C C +K+ + + NS + +K P EY+++D++ PI
Sbjct: 469 VLNPS------HKLLSCSDCFINKSHKVP-FSNSTITSSK---PLEYIYSDVWSSPILSI 518
Query: 277 SSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGS 336
+Y +Y++ F D TR+ W YPL K+ +V D F ++++F TR+ T+ D G
Sbjct: 519 DNY--RYYVIFVDHFTRYTWLYPLKQKS--QVKDTFIIFKSLVENRFQTRIGTLYSDNGG 574
Query: 337 EF 338
EF
Sbjct: 575 EF 576
>At1g59265 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1466
Score = 57.0 bits (136), Expect = 4e-08
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 234 CQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFG-PIRCRSSYPPQYFIAFTDEIT 292
C CL +K+ + + S ++ T+ P EY+++D++ PI +Y +Y++ F D T
Sbjct: 500 CSDCLINKSNKVP-FSQSTINSTR---PLEYIYSDVWSSPILSHDNY--RYYVIFVDHFT 553
Query: 293 RFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
R+ W YPL K+ +V + F L+++F TR+ T D G EF
Sbjct: 554 RYTWLYPLKQKS--QVKETFITFKNLLENRFQTRIGTFYSDNGGEF 597
>At1g58889 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1466
Score = 57.0 bits (136), Expect = 4e-08
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 234 CQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFG-PIRCRSSYPPQYFIAFTDEIT 292
C CL +K+ + + S ++ T+ P EY+++D++ PI +Y +Y++ F D T
Sbjct: 500 CSDCLINKSNKVP-FSQSTINSTR---PLEYIYSDVWSSPILSHDNY--RYYVIFVDHFT 553
Query: 293 RFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
R+ W YPL K+ +V + F L+++F TR+ T D G EF
Sbjct: 554 RYTWLYPLKQKS--QVKETFITFKNLLENRFQTRIGTFYSDNGGEF 597
>At4g22040 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1120
Score = 56.6 bits (135), Expect = 5e-08
Identities = 31/107 (28%), Positives = 54/107 (49%), Gaps = 10/107 (9%)
Query: 234 CQQCLESKAKRNNHYV--NSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEI 291
C C+ +K R+ + N MD F+ +H D++GP R S +YF+ D+
Sbjct: 323 CDTCMRAKQTRDTFPLRDNRSMD------SFQLIHCDVWGPYRTPSYSGARYFLTIVDDY 376
Query: 292 TRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
+R W Y + K+ E K+ + ++ QF T ++T++ D G+EF
Sbjct: 377 SRGVWVYLMTDKS--ETQKHLKDFMALVERQFDTEIKTVRSDNGTEF 421
>At4g10690 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1515
Score = 56.6 bits (135), Expect = 5e-08
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
Query: 196 HRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKR----NNHYVNS 251
H+ GH N + ++ I+ I K SS C+ C K R + +V+S
Sbjct: 459 HQRLGHPNKEVLQHLIKTKAIVVNKT--------SSNMCEACQMGKVCRLPFVASEFVSS 510
Query: 252 RMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDK 311
R P E +H DL+GP S+ QY++ F D +RF W YPL K +
Sbjct: 511 R--------PLERIHCDLWGPAPVTSAQGFQYYVIFIDNYSRFTWFYPL--KLKSDFFSV 560
Query: 312 FKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
F +++Q+ ++ Q D G EF +
Sbjct: 561 FVLFQQLVENQYQHKIAMFQCDGGGEFVS 589
>At2g07010 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1413
Score = 56.6 bits (135), Expect = 5e-08
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 230 SSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTD 289
SS C C +K R +S K F +H D++GP R SS YF+ D
Sbjct: 539 SSRSCDVCFRAKQTREVFPDSSN----KSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVD 594
Query: 290 EITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
+ +R WTY L +K+ EV + + QFG V+ I+ D G+EF
Sbjct: 595 DFSRSVWTYLLLAKS--EVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEF 641
>At2g13940 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1501
Score = 55.5 bits (132), Expect = 1e-07
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 230 SSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTD 289
+S C C +AK+ ++ T+E F +H D++GP R +S YF+ D
Sbjct: 556 TSHSCDVCF--RAKQTREVFPESINKTEEC--FSLIHCDVWGPYRVPASCGAVYFLTIVD 611
Query: 290 EITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
+ +R WTY L K+ EV + + QFG V+ ++ D G+EF
Sbjct: 612 DYSRAVWTYLLLEKS--EVRQVLTNFLKYAEKQFGKTVKMVRSDNGTEF 658
>At2g06950 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1402
Score = 55.5 bits (132), Expect = 1e-07
Identities = 51/191 (26%), Positives = 79/191 (40%), Gaps = 18/191 (9%)
Query: 151 KRIAKLYELGSLCWIPYCHISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRES 210
K KL +GS C YC K Q + S R + HR GH + + +++
Sbjct: 427 KATKKLLIMGSTCDGLYC--LKDDSQFKAFFSTRQQSASDEVW--HRRLGHPHPQVLQQL 482
Query: 211 IRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLF 270
++ I K S C+ C K+ R +V+S + P E +H DL+
Sbjct: 483 VKTNSISINKT--------SKSLCEACQLGKSTRLP-FVSSSFTSNR---PLERVHCDLW 530
Query: 271 GPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTI 330
GP S +Y+ F D +RF W YPL K + + F +++Q ++
Sbjct: 531 GPSPITSVQGFRYYAVFIDHYSRFSWIYPL--KLKSDFYNIFVAFHKLVENQLNHKISVF 588
Query: 331 QMDRGSEFTNN 341
Q D G EF N+
Sbjct: 589 QCDGGGEFVNH 599
>At1g43886 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 692
Score = 55.5 bits (132), Expect = 1e-07
Identities = 29/89 (32%), Positives = 50/89 (55%), Gaps = 5/89 (5%)
Query: 262 FEYLHTDLF-GPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLK 320
FE +H+DL+ PI S +Y++ F D+ + F W YPL +K+ +V KF + +K
Sbjct: 470 FEIIHSDLWTSPIPSLSGI--RYYVLFLDQFSHFLWIYPLRNKS--DVFSKFLQFHTYVK 525
Query: 321 SQFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
+QF ++++Q D G E+ N+ + K
Sbjct: 526 TQFEKHIKSLQCDNGGEYKNSQFHDFFAK 554
>At2g15870 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1264
Score = 54.3 bits (129), Expect = 3e-07
Identities = 28/88 (31%), Positives = 46/88 (51%), Gaps = 4/88 (4%)
Query: 262 FEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKS 321
FE LH D++GP + QYF+ D+ +R W Y L KT EV+ F + + Q+++
Sbjct: 473 FEMLHIDIWGPFSVETVDGYQYFLTIVDDHSRATWIYLL--KTKSEVLTIFHDFIQQVEN 530
Query: 322 QFGTRVRTIQMDRGSEFTNNMTRAYSKK 349
Q+ +V+ ++ D E T Y +K
Sbjct: 531 QYKVKVKAVRSDNAPEL--RFTSLYQRK 556
>At2g05390 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1307
Score = 54.3 bits (129), Expect = 3e-07
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 263 EYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQ 322
E +H DL GPI ++ +Y + D+ TR+ W+ L K+ E +KF++ +++ +
Sbjct: 454 ELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKS--EAFEKFRDFKTKVEQE 511
Query: 323 FGTRVRTIQMDRGSEFTNNMTRAYSKKE 350
G +++T + D+G EF + + + KE
Sbjct: 512 SGVKIKTFRTDKGGEFVSQEFQDFCAKE 539
>At1g44510 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1459
Score = 54.3 bits (129), Expect = 3e-07
Identities = 64/292 (21%), Positives = 118/292 (39%), Gaps = 30/292 (10%)
Query: 55 ARDLMIDSGATISVVHDKSLLHNFNP-STDQQLFDTQENQIRVEGEGNLILKFK-KDKVK 112
A ++DSGAT + D + L P + + + + ++ G+ L + +D
Sbjct: 334 ANPWLLDSGATHHITSDLNALSLHQPYNGGEYVMIADGTGLTIKQTGSTFLPSQNRDLAL 393
Query: 113 VRAIYTTDMSMNVISDAHLKNAGIFRDNRQPFLIS----RTGKRIAKLYELGSLCWIPYC 168
+ +Y D+ N+IS L N P TG + + L P
Sbjct: 394 HKVLYVPDIRKNLISVYRLCNTNQVSVEFFPASFQVKDLNTGTLLLQGRTKDDLYEWP-- 451
Query: 169 HISKPHEQTISAISIRDAPN-RFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWT 227
++ P A ++ +P+ + +L++ H GH + + + K + V
Sbjct: 452 -VTNP-----PATALFTSPSPKTTLSSWHSRLGHPSASILNTLLSKFSLP------VSVA 499
Query: 228 GYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLF-GPIRCRSSYPPQYFIA 286
+ C CL +K+ H + P EY+ TD++ PI +Y +Y++
Sbjct: 500 SSNKTSCSDCLINKS----HKLPFATSSIHSSSPLEYIFTDVWTSPIISHDNY--KYYLV 553
Query: 287 FTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
D TR+ W YPL K+ +V F ++++F ++RT+ D G EF
Sbjct: 554 LVDHYTRYTWLYPLQQKS--QVKATFIAFKALVENRFQAKIRTLYSDNGGEF 603
>At1g70010 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1315
Score = 53.9 bits (128), Expect = 3e-07
Identities = 48/202 (23%), Positives = 87/202 (42%), Gaps = 30/202 (14%)
Query: 150 GKRIAKLY--ELGSLCWIPYCHISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYI 207
GK++A LY +L SL H T+++++ D H+ GH +V+ +
Sbjct: 373 GKQVANLYIVDLDSLS-----HPGTDSSITVASVTSHDL--------WHKRLGHPSVQKL 419
Query: 208 RESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHT 267
+ K + + F C+ C SK K ++ K PF+ +H
Sbjct: 420 QPMSSLLSFPKQKNN-------TDFHCRVCHISKQKHLPFVSHNN----KSSRPFDLIHI 468
Query: 268 DLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRV 327
D +GP ++ +YF+ D+ +R W Y L +K+ +V+ V +++QF T +
Sbjct: 469 DTWGPFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKS--DVLTVIPTFVTMVENQFETTI 526
Query: 328 RTIQMDRGSEFTNNMTRAYSKK 349
+ ++ D E N T+ Y K
Sbjct: 527 KGVRSDNAPEL--NFTQFYHSK 546
>At2g16670 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1333
Score = 53.1 bits (126), Expect = 6e-07
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 234 CQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITR 293
C C +K RN+ + K FE ++ DL+GP R S +YF+ D+ +R
Sbjct: 423 CDVCHRAKQTRNSF----PLSINKTLRIFELIYCDLWGPYRTPSHTGARYFLTIIDDYSR 478
Query: 294 FRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
W Y L K+ E K QF +++T++ D G+EF
Sbjct: 479 GVWLYLLNDKS--EAPCHLKNFFAMTDRQFNVKIKTVRSDNGTEF 521
>At1g53810 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1522
Score = 52.8 bits (125), Expect = 8e-07
Identities = 29/84 (34%), Positives = 44/84 (51%), Gaps = 8/84 (9%)
Query: 261 PFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVM--- 317
P E +H DL+GP S +Y++ F D +RF W YPL K+ D F VM
Sbjct: 515 PLERIHCDLWGPSPTSSVQGFRYYVVFIDHYSRFTWFYPLKLKS-----DFFSTFVMFQK 569
Query: 318 QLKSQFGTRVRTIQMDRGSEFTNN 341
+++Q G +++ Q D G EF ++
Sbjct: 570 LVENQLGHKIKIFQCDGGGEFISS 593
>At1g36620 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1152
Score = 52.8 bits (125), Expect = 8e-07
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 193 ANVHRW-----FGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKRNNH 247
ANV +W H+ + + + + L++ D + + C C+ +K R
Sbjct: 502 ANVVKWKTNKALWHMRLGHPSSKVLSSVLPSLEDFDSCSSDLKTI-CDVCVRAKQTR--- 557
Query: 248 YVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEE 307
+ + K F ++H D++GP + SS YF+ D+ +R W + + +K+ E
Sbjct: 558 -ASFSESFNKAEECFSFIHYDVWGPYKHASSCGAHYFLTIVDDHSRAVWIHLMLAKS--E 614
Query: 308 VVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
V ++ + QF +V+T++ + G+EF
Sbjct: 615 VASLLQQFIAMASRQFNKQVKTVRSNNGTEF 645
>At4g21360 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1308
Score = 52.4 bits (124), Expect = 1e-06
Identities = 61/296 (20%), Positives = 119/296 (39%), Gaps = 55/296 (18%)
Query: 59 MIDSGATISVVHDKSLLHNFNPSTDQQLFDTQENQIRVEGEGNLILKFKKDKVKV--RAI 116
+IDSG T + FN + + ++ + +G G + + ++V
Sbjct: 310 VIDSGCTYHMTSRMDWFSEFNENETTMILLGDDHTVESKGSGTVKVNTHGGSIRVLKNVR 369
Query: 117 YTTDMSMNVISDAHLKNAG-----------IFRDNRQPFLISRTGKRIAKLYEL-GSLCW 164
+ ++ N+IS L G +++N+ G + LY L G
Sbjct: 370 FVPNLRRNLISTGTLDKLGYKHEGGDGKVRFYKENKTALC----GNLVNGLYVLDGHTVV 425
Query: 165 IPYCHISKPHEQTISAISIRDAPNRFSLANVHRWFGHINVKYIRESIRKGHIQGLKEDDV 224
C++ +E+T H GH+++ ++ KG L++ D+
Sbjct: 426 NENCNVEGSNEKT---------------ELWHCRLGHMSLNNMKILAEKGL---LEKKDI 467
Query: 225 DWTGYSSFQCQQCLESKAKRNNHYVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYF 284
+ C+ C+ K+K+ + V + T E Y+H DL+G QYF
Sbjct: 468 KELSF----CENCVMGKSKKLSFNVGKHI--TDEV--LGYIHADLWGK---------QYF 510
Query: 285 IAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
++ D+ +R W ++ KT +E ++F E +++Q +V+ ++ D G EF N
Sbjct: 511 LSIIDDKSRKVWL--MFLKTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCN 564
>At4g14460 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1489
Score = 52.0 bits (123), Expect = 1e-06
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 261 PFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLK 320
PF+ +H D++GP S +YF+ D+ TR W Y L +K ++V F E + +
Sbjct: 632 PFDLVHLDIWGPFSIESIEGFRYFLTVVDDCTRTTWVYMLRNK--KDVSSVFPEFIKLVS 689
Query: 321 SQFGTRVRTIQMDRGSE 337
+QF +++ I+ D E
Sbjct: 690 TQFNAKIKAIRSDNAPE 706
>At4g28900 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1415
Score = 51.6 bits (122), Expect = 2e-06
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 196 HRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKR----NNHYVNS 251
H GH N +++ +R I + T +S C C K + ++ +V+S
Sbjct: 428 HMRLGHPNQDVLQQLLRNKAIV------ISKTSHSL--CDACQMGKICKLPFASSDFVSS 479
Query: 252 RMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDK 311
R+ E +H DL+GP SS +Y++ F D +RF W YPL K+ +
Sbjct: 480 RL--------LERVHCDLWGPAPVVSSQGFRYYVIFIDNYSRFTWFYPLRLKS--DFFSV 529
Query: 312 FKEIVMQLKSQFGTRVRTIQMDRGSEFTNN 341
F +++Q ++ + Q D G EF +N
Sbjct: 530 FLTFQKMVENQCQQKIASFQCDGGGEFISN 559
>At4g04280 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1104
Score = 50.8 bits (120), Expect = 3e-06
Identities = 30/87 (34%), Positives = 47/87 (53%), Gaps = 3/87 (3%)
Query: 264 YLHTDLFG-PIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDKFKEIVMQLKSQ 322
Y+H DL+G P S QYF++ D+ +R W ++ K+ +E DKF E +++
Sbjct: 403 YVHADLWGSPNVTPSISGKQYFLSIIDDKSRKVWL--MFLKSKDETFDKFCEWKEIVENH 460
Query: 323 FGTRVRTIQMDRGSEFTNNMTRAYSKK 349
G +V+T++ D G EF NN Y K
Sbjct: 461 VGKKVKTLRTDNGLEFCNNRFNDYCAK 487
>At2g15700 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1166
Score = 50.8 bits (120), Expect = 3e-06
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 31/149 (20%)
Query: 192 LANVHRWFGHINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKRNNHYVNS 251
L NV GH+++K + + +G++ G + D +++ C+ C+ K+
Sbjct: 340 LTNVR--LGHMSLKNMNVLVEEGYLSGKEVDKLEF-------CESCVLGKSH-------- 382
Query: 252 RMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEEVVDK 311
K+ +P HT CR YF++F D+ ++ W Y + KT +E K
Sbjct: 383 -----KQSFPTAK-HTTKESLGGCR------YFVSFIDDFSKKVWVY--FLKTKDEAYHK 428
Query: 312 FKEIVMQLKSQFGTRVRTIQMDRGSEFTN 340
F+E +++Q G +++ ++ D G EF N
Sbjct: 429 FREWKQAVENQTGKKIKYLRTDNGLEFYN 457
>At2g11230 [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 962
Score = 49.7 bits (117), Expect = 7e-06
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 191 SLANVHRWFG---HINVKYIRESIRKGHIQGLKEDDVDWTGYSSFQCQQCLESKAKRNNH 247
SL+ +RW H N+ I+ I+K ++G+ ++ C CL K R
Sbjct: 746 SLSESNRWHSRLRHTNLDTIKSMIQKELVRGIPHVKIE-----KEVCDLCLFGKQSRQVF 800
Query: 248 YVNSRMDYTKEYYPFEYLHTDLFGPIRCRSSYPPQYFIAFTDEITRFRWTYPLYSKTAEE 307
+ K E +H DL GPI + +Y D+ +R+ WT L K+ +
Sbjct: 801 PQGTSYRAAKI---LELVHGDLCGPITPSTHAGNKYIFVIIDDKSRYMWTALLKEKS--D 855
Query: 308 VVDKFKEIVMQLKSQFGTRVRTIQMDRGSEF 338
+KFK+ ++ + +++T + +RG EF
Sbjct: 856 SFNKFKQFRALVEQETRIKIQTFRTNRGGEF 886
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.134 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,383,776
Number of Sequences: 60738
Number of extensions: 863326
Number of successful extensions: 2535
Number of sequences better than 1.0e-05: 100
Number of HSP's better than 0.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 2362
Number of HSP's gapped (non-prelim): 137
length of query: 352
length of database: 30,389,216
effective HSP length: 107
effective length of query: 245
effective length of database: 23,890,250
effective search space: 5853111250
effective search space used: 5853111250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)